prot_P-littoralis_Contig79.52.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig79.52.1
Unique Nameprot_P-littoralis_Contig79.52.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length434
Homology
BLAST of mRNA_P-littoralis_Contig79.52.1 vs. uniprot
Match: A0A6H5JS72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS72_9PHAE)

HSP 1 Score: 182 bits (462), Expect = 2.120e-49
Identity = 144/410 (35.12%), Postives = 194/410 (47.32%), Query Frame = 0
Query:   10 RVFTATWPSYAPATGRADGTRGGSKGHVGQQTGPFCQVAIQAVPASPDGYDTFTSGTAANAAGNNGRNKKLVYLERSLPLRSYNSISLSEDGTYSVTLSDCHGIVPSA--SPSLAGTTQPLLSSSINGDRRLPEGARRQNVEENGGRSCGSDDDDIINGPTVEAVRVLFVPLPLSIEFRVETGQVAGGETAVGNFHLLPVSHVPQVPQPSLCGMDSKCEGTSVRNHDH-DQELGVRHALQSSPP--------------------PGEG-GDRDGSSPSSARGCGDDRSSLYFSPGSCFVSGVATGVLFYFLLTWLVVTRGYGKRSWERGVNRLKVE-------SGWVETAIGDQGARKKRGL-HVIEDGEQSDNGSSDSDTILDGNVPEPVGLPRSDEDWRALFDTLYED 387
            RVFTATWP Y PA+ R +  +   +    +++GP+CQVAI+ + A   G    +S  A    G  G    L++++  L LRSYNS+SLS+DG YS+TLSDCHG +P A  SP    ++ P  S + +G       A R   +                    E  R+LF+PLP SI+F V   Q       +GNFHLLPV+HVPQ+    +   ++      +R   H D   GV    +SS                       GEG G  +G++PSS               G  F            LL  +V   G+GK   E     LK +       SGW    +   G +K+ G+ H ++   + D+GSSDSD  L  NVPEPVGLPRS+EDWR LFDTLYED
Sbjct:   43 RVFTATWPPYTPASTRGEDHQQADRDD--RESGPYCQVAIRTLRARTSGAAFISSSEATTGHGEGG---DLLFVQPGLLLRSYNSVSLSDDGAYSLTLSDCHGFIPIATSSPDRPASSPPWRSRNHDGGA-----AGRPEWQ------------------MAEIGRLLFLPLPSSIDFEVNRRQATSSGAIIGNFHLLPVAHVPQLQHAPVFNTETSTTSPGIRTVGHADYTPGVPVLQESSRAYFSSAMAAADTLCDREKMACTGEGPGVGEGTAPSSI--------------GGGFTXXXXXXXXXSLLLVLVVFRGGWGKDFLENFWTLLKGDGDAGMKKSGWGGFIVSIGGEKKEDGVPHCVDAPGKIDDGSSDSDETLIENVPEPVGLPRSEEDWRVLFDTLYED 410          
BLAST of mRNA_P-littoralis_Contig79.52.1 vs. uniprot
Match: D7FIC8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIC8_ECTSI)

HSP 1 Score: 134 bits (337), Expect = 4.520e-32
Identity = 104/317 (32.81%), Postives = 144/317 (45.43%), Query Frame = 0
Query:   39 QQTGPFCQVAIQAVPASPDGYDTFTSGTAANAAGNNGRNKKLVYLERSLPLRSYNSISLSEDGTYSVTLSDCHGIVPSASPSLAGTTQPLLSSSINGDRRLPEGARRQNVEENGGRSCGSDDDDIINGPTVEAVRVLFVPLPLSIEFRVETGQVAGGETAVGNFHLLPVSHVPQVPQPSLCGMDSKCEGTSVRNHDHD---------QELGVRHALQSSPPPGEGGDRDGSSPSSARGCGDDRSSLYFSPGSCFVSGVATGVLFYFLLTWLVVTRGYGKRSWERGVNRLKVE-------SGWVETAIGDQGARKKRG 339
            +Q GP+CQVAI+ + A   G    +S  A    G  G    L+++ER L +RSYNS+SLS+DGTYS+TLSDC+G +P  + S A         S N D    +  RR+                     T E VR+LF+PLP S+EF V +GQ     T +GNFHLLPV+HVPQ+    +   ++      +R   H           E    +   ++    +     G       G G D  +   S G  F  GVA GV+F  LL  ++   G GK   E     LK +       SGW    +   G +K+RG
Sbjct:   14 RQRGPYCQVAIRTLRARTSGAAFISSSEATTDQGEGG---DLLFVERELLVRSYNSVSLSDDGTYSLTLSDCYGFMPITTSSPARRVSSASWRSRNHDGA--DAGRRERQ-------------------TAEIVRILFLPLPSSMEFVVNSGQATSSGTVIGNFHLLPVAHVPQLQHAPVFNAETTTTSPDIRTVGHAAYTPGVPVLHEPSRAYFSSTTAAAADSLCERGEMGCIGEGPGVDEGTALSSVGGGFAGGVAVGVVFSLLLVLIIFRGGRGKDFMENFWTLLKGDGDAGMRKSGWRGFIVSVGGEKKERG 306          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig79.52.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JS72_9PHAE2.120e-4935.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIC8_ECTSI4.520e-3232.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 130..158
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 224..267
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 227..241

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig79contigP-littoralis_Contig79:198472..202531 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig79.52.1mRNA_P-littoralis_Contig79.52.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig79 197881..203191 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig79.52.1 ID=prot_P-littoralis_Contig79.52.1|Name=mRNA_P-littoralis_Contig79.52.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=434bp
MMVTQASKTRVFTATWPSYAPATGRADGTRGGSKGHVGQQTGPFCQVAIQ
AVPASPDGYDTFTSGTAANAAGNNGRNKKLVYLERSLPLRSYNSISLSED
GTYSVTLSDCHGIVPSASPSLAGTTQPLLSSSINGDRRLPEGARRQNVEE
NGGRSCGSDDDDIINGPTVEAVRVLFVPLPLSIEFRVETGQVAGGETAVG
NFHLLPVSHVPQVPQPSLCGMDSKCEGTSVRNHDHDQELGVRHALQSSPP
PGEGGDRDGSSPSSARGCGDDRSSLYFSPGSCFVSGVATGVLFYFLLTWL
VVTRGYGKRSWERGVNRLKVESGWVETAIGDQGARKKRGLHVIEDGEQSD
NGSSDSDTILDGNVPEPVGLPRSDEDWRALFDTLYEDRANIEAADARLEA
SCTSAASDGVKVDAAVNSVAPAATGDAPPSCST*
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