mRNA_P-littoralis_Contig79.40.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig79.40.1
Unique NamemRNA_P-littoralis_Contig79.40.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig79.40.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 357 bits (917), Expect = 1.730e-117
Identity = 177/328 (53.96%), Postives = 225/328 (68.60%), Query Frame = 1
Query:   13 QVLASLHILGRGNFFEDMTQMSHISEPTIQITFHMFNKLFAQEFYHDHVHLPTAGEDQDQVMRHYDLLGFTGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDKTIITYDAAITKIREDPVYKEKEYTLFDKHGEPFQRKGNYSIVDNGYNKWEILIPPSKFAGTDIEIRWSKALESVRKDVECFFGILNGRFRILKLGILFQSLEDINNMFFTCCTLHNMLHAFDGLDEFEPTVEWGGKEGLHDPWDNPPLLDESTTGSTSTSVDDDNANKKPVQEHF-ILKKALVAHFEVRRQQRSIRWL 993
            +VLA L IL RGN F D+  MS IS  T   TFH F + FA+E Y +H+ LPT G+ Q +VM  YD LGF+GA GSTDVTHI W  CPY+ A+ YTGKEG+ T+A+Q  VDHT R+LA T GF GS NDK+II YD A+TKIREDP+Y EKE+T+++  G P+Q KG Y +VDNGY+KW  LIPPSK+     ++ +SK LESVRKDVECFFGI+ GRFRILKL I +   EDI+N+FFTCC LHNMLH++D   E E    W G  GLH+ W++ P LD S+ G+  +S   ++     V+  F   +K L+A F  R+ +  I WL
Sbjct:  158 KVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPT-GDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVE---VESGFNTRRKQLIASFVYRKSKNDIAWL 481          
BLAST of mRNA_P-littoralis_Contig79.40.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 330 bits (847), Expect = 5.870e-108
Identity = 176/329 (53.50%), Postives = 216/329 (65.65%), Query Frame = 1
Query:   13 QVLASLHILGRGNFFEDMTQMSHISEPTIQITFHMFNKLFAQEFYHDHVHLPTAGEDQDQVMRHYDLLGFTGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDKTIITYDAAITKIREDPVYKEKEYTLFDKHGEPFQRKGNYSIVDNGYNKWEILIPPSKFAGTDIEIRWSKALESVRKDVECFFGILNGRFRILKLGILFQSLEDINNMFFTCCTLHNMLHAFDGLDEFEPTVEWGGKEGLHDPWDNPPLLDESTTGSTSTSVDDDNANKKPVQEHF-ILKKALVAHFEVRRQQ-RSIRWL 993
            QVLA L IL RGN F D+  MS IS  T+  TFH F K FA E Y ++V+LPT GED  +VM  YD +GF GA+GSTDVTHI W  CPY+ A+ YTGKEG  T+AFQ  VDH+GR+LA T+GF G+ NDKTII YD A+T+IR DPVY E++Y L+ + G+ F+ KG Y +VDNGY+KW  LIPPSK      ++ +SK LES RKDVEC+FGIL GRFRI KL I F   E I+N+FFTCC LHNMLH+FD   +      W G  GLH+  D  P  D S+ GS      D       V+  F  L+  LV +F  RR++ R I WL
Sbjct:   83 QVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPT-GEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVGSM-----DGQHEAVEVETGFGALRSKLVTNFVYRREKKRDIVWL 405          
BLAST of mRNA_P-littoralis_Contig79.40.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 329 bits (844), Expect = 2.740e-106
Identity = 175/331 (52.87%), Postives = 217/331 (65.56%), Query Frame = 1
Query:    7 DCQVLASLHILGRGNFFEDMTQMSHISEPTIQITFHMFNKLFAQEFYHDHVHLPTAGEDQDQVMRHYDLLGFTGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDKTIITYDAAITKIREDPVYKEKEYTLFDKHGEPFQRKGNYSIVDNGYNKWEILIPPSKFAGTDIEIRWSKALESVRKDVECFFGILNGRFRILKLGILFQSLEDINNMFFTCCTLHNMLHAFDGLDEFEPTVEWGGKEGLHDPWDNPPLLDESTTGSTSTSVDDDNANKKPVQEHF-ILKKALVAHFEVRRQQ-RSIRWL 993
            + +VLA L IL RGN F D+  MS IS  T+  TFH F K FA E Y ++V+LPT GED  +VM  YD +GF GA+GSTDVTHI W  CPY+ A+ YTGKEG  T+AFQ  VDH+GR+LA T+GF G+ NDKTII YD A+T+IR DPVY E++Y L+ + G+ F+ KG Y +VDNGY+KW  LIPPSK      ++ +SK LES RKDVEC+FGIL GRFRI KL I F   E I+N+FFTCC LHNMLH+FD   +      W G  GLH+  D  P  D S+ GS      D       V+  F  L+  LV +F  RR++ R I WL
Sbjct:  172 ELKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPT-GEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVGSM-----DGQHEAVEVETGFGALRSKLVTNFVYRREKKRDIVWL 496          
BLAST of mRNA_P-littoralis_Contig79.40.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 297 bits (761), Expect = 2.400e-94
Identity = 162/338 (47.93%), Postives = 212/338 (62.72%), Query Frame = 1
Query:   13 QVLASLHILGRGNFFEDMTQMSHISEPTIQITFHMFNKLFAQEFYHDHVHLPTAGEDQ-DQVMRHYDLLGFTGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDKTIITYDAAITKIREDPVYKEKEYTLFDKHGEPFQRKGNYSIVDNGYNKWEILIPPSKFAGTDIEIRWSKALESVRKDVECFFGILNGRFRILKLGILFQSLEDINNMFFTCCTLHNMLHAFDGLDEFEPTVEWGGKEGLHDPWDNPPLLDESTTGST--STSVDDDNANKKPVQE--HFILKKALVAHFEVRRQ-QRSIRWLKHTAP 1008
            +VLA L ILGRGN F  +  +S +S PT+Q  FH F + FA E Y +H+ LP+    + D+VM  Y+ LGF GA+GSTDVTHI W+ CPY+  + YTGKEG  T+ +Q  V+H GR+LA T+GF GS NDKTII  D A+ +IR D  Y EK +T+  K G     KG Y IVDNGY+KW +LI PSK+  ++ ++ +SK LESVRKDVECFFGIL  RFRILKL + +Q  E ++ +FFTCC LHNMLH  DG+   E  V W G   L           ++T+G    S+SV   + N KP  E  H  LK+ L  +F  R++ ++ I WL    P
Sbjct:  127 KVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAEL-----------QNTSGHNLDSSSVGTKDLNDKPQVEAAHAELKRKLTTNFLYRKKHKKDIVWLSRKRP 453          
BLAST of mRNA_P-littoralis_Contig79.40.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 295 bits (756), Expect = 8.200e-94
Identity = 165/357 (46.22%), Postives = 214/357 (59.94%), Query Frame = 1
Query:   13 QVLASLHILGRGNFFEDMTQMSHISEPTIQITFHMFNKLFAQEFYHDHVHLPTAGEDQ-DQVMRHYDLLGFTGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDKTIITYDAAITKIREDPVYK----------------------------EKEYTLFDKHGEPFQRKGNYSIVDNGYNKWEILIPPSKFAGTDIEIRWSKALESVRKDVECFFGILNGRFRILKLGILFQSLEDINNMFFTCCTLHNMLHAFDGLDEFEPTVEWGGKEGLHDPWDNPPLLDESTTGSTSTSVDDDNANKKPVQEHFILKKALVAHFEVRRQ-QRSIRWL 993
            +VLA L ILGRGN F  + QMS +S  T+Q  FH F + FA+E Y + +HLPT    + D VM+ YD LGFTGA+GS DVTHI W+ CPY+ A+ YTGKEGF TIA+Q  VDH GR +A T+GF GS NDKTI+ +D A+ KI  D  Y                             EK + ++++ G     KG Y +VDNGY+KW+ILI PSK+  ++ ++ +SK LESVRKDVECFFGIL GRFRILKL + +QS E I+N+FFTC  LHNMLH FDG+D+      W    G+       P   E+  GS  T   D N   +   EH + K+ L   F  R++ ++ I WL
Sbjct:   85 KVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTNWVSSAGVGATLTTEP---EADCGSVGTK--DVNDQPQLEIEHTVRKRQLTTSFAYRKKHKKDIVWL 436          
BLAST of mRNA_P-littoralis_Contig79.40.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE)

HSP 1 Score: 287 bits (735), Expect = 2.780e-91
Identity = 142/291 (48.80%), Postives = 191/291 (65.64%), Query Frame = 1
Query:   13 QVLASLHILGRGNFFEDMTQMSHISEPTIQITFHMFNKLFAQEFYHDHVHLPTAGEDQ-DQVMRHYDLLGFTGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDKTIITYDAAITKIREDPVYKEKEYTLFDKHGEPFQRKGNYSIVDNGYNKWEILIPPSKFAGTDIEIRWSKALESVRKDVECFFGILNGRFRILKLGILFQSLEDINNMFFTCCTLHNMLHAFDGLDEFEPTVEWGGKEGLHDPWDNPPLLDESTTGSTSTS 882
            +VLA L ILGRGN F  + Q+S +S  T+Q  FH F K FA+E Y +H++LP+    + D VM+ YD LGF+GA+GS DVTHI W+ CPY+ A+ YTGKEG  T+ +Q  V+H GR +A T+GF  S NDKT + +DA + KIR D  Y EK + ++++ G     KG Y +VDNGY+KW+IL+ P+K+  ++ +I +SK LESVRKDVECFFGIL G FRI K+ + +   E I+N+FFTCC LHNMLH FDG+D+      W    G           D ST G+  T+
Sbjct:   98 KVLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVENTLWVSSAGAGTGVATEQEADSSTVGAKDTN 388          
BLAST of mRNA_P-littoralis_Contig79.40.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE)

HSP 1 Score: 285 bits (728), Expect = 1.600e-90
Identity = 149/331 (45.02%), Postives = 202/331 (61.03%), Query Frame = 1
Query:   34 ILGRGNFFEDMTQMSHISEPTIQITFHMFNKLFAQEFYHDHVHLPTAGEDQDQVMRHYDLLGFTGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDKTIITYDAAITKIREDPVYKEKEYTLFDKHGEPFQRKGNYSIVDNGYNKWEILIPPSKFAGTDIEIRWSKALESVRKDVECFFGILNGRFRILKLGILFQSLEDINNMFFTCCTLHNMLHAFDGLDEFEPTVEWGGKEGLHDPWDNPPLLDESTTGSTSTSV-----------DDDNANKKPVQEHFILKKALVAHFEVRRQQRSIRWL 993
            +LG+GN F+D+ Q+S +S+   Q TFH F + FA E + +H++LPT G   D+VM  +  LG+TGA GSTDVTHI W  CP++  + +TGKEGF TIA+   VDH GR LA T GF G+ NDKTII YD+ + KIR    Y E+EY L   +G    R+G + IVDNGY++W  LI PSK+   + +  +S+ LESVRKDV CF        RILKL + +   E ++N+FFTCC LHNMLH FDGLD FE   +W G  G HD W++ PL D ++ GS    +           +  +  K+   +H  LK+ L+  F  R++   I WL
Sbjct:   43 VLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPT-GTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGCF--------RILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLPPKEGEKAECGEGGHVRKERHPDHAELKRQLIESFAFRKKINDITWL 364          
BLAST of mRNA_P-littoralis_Contig79.40.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI)

HSP 1 Score: 273 bits (699), Expect = 3.270e-87
Identity = 136/279 (48.75%), Postives = 177/279 (63.44%), Query Frame = 1
Query:  145 YHDHVHLPTAGEDQ-DQVMRHYDLLGFTGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDKTIITYDAAITKIREDPVYKEKEYTLFDKHGEPFQRKGNYSIVDNGYNKWEILIPPSKFAGTDIEIRWSKALESVRKDVECFFGILNGRFRILKLGILFQSLEDINNMFFTCCTLHNMLHAFDGLDEFEPTVEWGGKEGLHDPWDNPPLLDESTTGSTSTSVDDDNANKKPVQEHFILKKALVAHFEVRRQQR 978
            Y +H+HLPT    + D V+  YD LGFTGA+GS DVTHI W+ CPY+ A+ YTGKEGF TI +Q  VDH GR +A T+GF GS NDKT + +DAA+ KIR D  Y EK + ++++ G     KG Y +VDNGY+KW+ILI PSK+  ++ ++ +SK LESVRKDVECFFGIL GR RIL L + FQS E I+N+FFTCC LHNMLH FDG+D+      W    G+         + E    S S    D N   +    H + K+ L   F  R++ +
Sbjct:    2 YDEHIHLPTEESGKLDLVIEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGV-----GTTSVTEPEADSGSVGTKDVNGRPQVEAGHAVRKRQLTTSFAYRKKHK 275          
BLAST of mRNA_P-littoralis_Contig79.40.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE)

HSP 1 Score: 274 bits (701), Expect = 5.360e-87
Identity = 153/331 (46.22%), Postives = 201/331 (60.73%), Query Frame = 1
Query:   13 QVLASLHILGRGNFFEDMTQMSHISEPTIQITFHMFNKLFAQEFYHDHVHLPTAGEDQ-DQVMRHYDLLGFTGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDKTIITYDAAITKIREDPVYKEKEYTLFDKHGEPFQRKGNYSIVDNGYNKWEILIPPSKFAGTDIEIRWSKALESVRKDVECFFGILNGRFRILKLGILFQSLEDINNMFFTCCTLHNMLHAFDGLDEFEPTVEWGGKEGLHDPWDNPPLLDESTTGSTSTSVDDDNANKKPVQE--HFILKKALVAHFEVRRQ-QRSIRWL 993
            QVLA L ILG+GN F  + QMS +S  T+Q  FH F +LFA+E Y +H+HLP     +   VM+ YD LG                 CPY+ A+ YTGK+ F TIA+Q  VDH  R +A T+GF GS NDKTI+ +DAA+ KIR D  Y EK + L+++ G     KG Y + DNGY+KW+ILI PSK+  ++ ++ +SK LESVRKDVECFFGIL GRFRILKL + +QS E I+N+FFTCC LHNMLH FDG+D+      W    G+       P   E+  GS  T     + N +P  E  H + K+ L   F  R++ ++ I WL
Sbjct:   20 QVLAWLTILGKGNCFASIFQMSWMSAKTVQGVFHKFCRLFAREMYDEHIHLPAEESGKLHHVMKQYDRLG-----------------CPYNQARSYTGKDWFPTIAYQVTVDHASRAIAVTEGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTLATEP---EADCGSFGTK----DVNDQPQLEIGHTVRKRQLTTSFAYRKKHKKDIVWL 326          
BLAST of mRNA_P-littoralis_Contig79.40.1 vs. uniprot
Match: A0A6H5KZ66_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ66_9PHAE)

HSP 1 Score: 267 bits (682), Expect = 1.510e-85
Identity = 130/189 (68.78%), Postives = 146/189 (77.25%), Query Frame = 1
Query:  271 CPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDKTIITYDAAITKIREDPVYKEKEYTLFDKHGEPFQRKGNYSIVDNGYNKWEILIPPSKFAGTDIEIRWSKALESVRKDVECFFGILNGRFRILKLGILFQSLEDINNMFFTCCTLHNMLHAFDGLDEFEPTVEWGGKEGLHDPWDN 837
            CPYS A+ YTGKEGF +IA+QAIVDHTGR+LA TKGF G+MNDKTII YD A+  IR DPVY EK  TLFD++G PF+RKGNYSIVDNGYNK            TD+E +WSKA ESVRKDVECF GIL GRF+ILKLGI FQ    I+N+F TCCTLHNMLHAFDGL+E E   EWG + GLHD WDN
Sbjct:   21 CPYSRARQYTGKEGFPSIAYQAIVDHTGRVLAVTKGFPGAMNDKTIIRYDTAVAMIRRDPVYTEKVNTLFDENGRPFERKGNYSIVDNGYNK------------TDMESKWSKAQESVRKDVECF-GILMGRFKILKLGIFFQDKNVIDNLFVTCCTLHNMLHAFDGLEELEIVEEWGARAGLHDAWDN 196          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig79.40.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JAU4_9PHAE1.730e-11753.96Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KY50_9PHAE5.870e-10853.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE2.740e-10652.87Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBE2_9PHAE2.400e-9447.93Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNX4_9PHAE8.200e-9446.22DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JHI0_9PHAE2.780e-9148.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K796_9PHAE1.600e-9045.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSK2_ECTSI3.270e-8748.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JUX7_9PHAE5.360e-8746.22DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KZ66_9PHAE1.510e-8568.78DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig79contigP-littoralis_Contig79:142558..144801 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FSK2
PFAMsPlant_tran
Model size1062
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue5.36e-88
EggNOG OGs2E2RF@1|root,2S9YA@2759|Eukaryota
DescriptionPlant transposon protein
Cds size1062
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791616.3943963-CDS-P-littoralis_Contig79:142557..1430731680791616.3943963-CDS-P-littoralis_Contig79:142557..143073Pylaiella littoralis U1_48CDSP-littoralis_Contig79 142558..143073 -
1680791616.4082727-CDS-P-littoralis_Contig79:143603..1439571680791616.4082727-CDS-P-littoralis_Contig79:143603..143957Pylaiella littoralis U1_48CDSP-littoralis_Contig79 143604..143957 -
1680791616.4227562-CDS-P-littoralis_Contig79:144609..1448011680791616.4227562-CDS-P-littoralis_Contig79:144609..144801Pylaiella littoralis U1_48CDSP-littoralis_Contig79 144610..144801 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig79.40.1prot_P-littoralis_Contig79.40.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig79 142558..144801 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig79.40.1

>prot_P-littoralis_Contig79.40.1 ID=prot_P-littoralis_Contig79.40.1|Name=mRNA_P-littoralis_Contig79.40.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=354bp
FSDCQVLASLHILGRGNFFEDMTQMSHISEPTIQITFHMFNKLFAQEFYH
DHVHLPTAGEDQDQVMRHYDLLGFTGAIGSTDVTHIKWAACPYSWAKHYT
GKEGFATIAFQAIVDHTGRLLAATKGFGGSMNDKTIITYDAAITKIREDP
VYKEKEYTLFDKHGEPFQRKGNYSIVDNGYNKWEILIPPSKFAGTDIEIR
WSKALESVRKDVECFFGILNGRFRILKLGILFQSLEDINNMFFTCCTLHN
MLHAFDGLDEFEPTVEWGGKEGLHDPWDNPPLLDESTTGSTSTSVDDDNA
NKKPVQEHFILKKALVAHFEVRRQQRSIRWLKHTAPGRRHASRNVEIANV
ETA*
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mRNA from alignment at P-littoralis_Contig79:142558..144801-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig79.40.1 ID=mRNA_P-littoralis_Contig79.40.1|Name=mRNA_P-littoralis_Contig79.40.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2244bp|location=Sequence derived from alignment at P-littoralis_Contig79:142558..144801- (Pylaiella littoralis U1_48)
TTTTCTGATTGTCAGGTCCTGGCATCGCTGCACATACTTGGGAGGGGCAA CTTCTTCGAGGATATGACCCAGATGTCTCACATTAGCGAGCCGACGATAC AAATCACCTTTCACATGTTCAACAAGCTTTTCGCGCAAGAGTTCTACCAC GACCACGTGCATCTGCCCACCGCCGGCGAGGACCAAGACCAGGTGACTGG TCTCATCGTACAAGTATTGTGAACCCATGTTTTGTCCCGACACACGTATC GTAGACCTTTTTATAATGCAAAGTATGTAATGTTGTGAAGTGGCGCATCT TGTCTCATTTTTTTCTCGCCGTTAAAATATGGTAAATTTACCTACTTCAA CTTCAGTGTCTCCTCATGATGGATTGCATTCTATCTCCGACCGCCAAGGC ATCGTTGTCCGTTTGCGTTTTGGTCGGACCATGCACGGGAAGTCGATACC GGATTAAGCTGGCAGCGTGCTCGGGTGCTCGTATCCGCGATGTGTCGCAT TTAGTCTGCCAAATAGAACAACGATCAACACCTTCATTCGAGTCAACATT ATCCACTGCCTCAAGTTAAGCACGTGCATTGCGGTCTTGGTAGCGCATTG CTCTGAGTAAACAACAACGCACCAAACAGAAAGTGGAACGGCATCTATGT TCAGTTAAGTTAGGCACGTTGTAGCTCCCGGGTTTTGTGTGTGTTTGAAG TGCTGGATATGACATTGCCTCTATATCGTGTACCAGGTATGTAGGTTGGT TTGTAGCCTCGACGCTCTCTCCTTTGGACGCATGAACCCCAAGCCTTTGC ACGCCGTACTTCTTGCGACCCCACTGTTTCTTGCCAAACATCAGGTGATG AGGCATTACGACCTACTGGGGTTTACTGGAGCAATCGGTTCGACTGATGT CACCCACATCAAATGGGCGGCTTGCCCGTATTCTTGGGCGAAGCACTACA CGGGAAAGGAAGGTTTCGCGACCATCGCCTTCCAGGCGATCGTGGATCAC ACTGGGCGTCTCCTGGCCGCGACAAAGGGCTTTGGTGGCTCGATGAACGA CAAGACCATCATCACGTACGACGCGGCCATCACTAAAATCCGCGAAGACC CGGTCTACAAGGAGAAGGAGTACACTCTCTTCGACAAGCATGGTGAGCCG TTCCAGCGAAAGGGCAACTACAGCATCGTCGACAATGGGTACAACAAGGT GAGATTGCTCTGCGGCTCGGTTGCTCGAGGTGTAGCCCGTGTGTTGGTGC CTCGTAGCTCTCCTATGGATAGGCTTCAACGCTGTGCTTGTACGTCATGA TGGAGAATTAAGACGAAACTAGCGTTTGTCCTGCTCGTACGTGGAGAGTC TGTATTCTCCTAGCAAGAACCGTTGACAAAAAGCTAGTAACCGATCGCCA CCGCACTGTCTGAATGGGGTGTTGGCGGGGCTCGATCTGTACGAATGCAT CCGCCAAACAACATCGCACATGCTGTCCCGCGGGTTTGCTGTATGTCATG TTTTTTTATGGTGTATTTTCGAACAACTGCTGCCCGCTGTTGTCCGCTGT TGAGTGTCCACTGTGAAGCGCACTCGGACGTCCAAGGAGCGTGTGAAGTG TTCAGCGTCCCGCTGATTCGAACACGTTTTTCACACCGAAGCTCGAAGGT TGCCCCCTCCTCATCCCACGTGCTGTCTGCCTTTCGTTTCCGTCCGTCTG TCACGCCTCGCCTCCCTTCCTACATAAGTGGGAGATCCTCATCCCCCCTA GCAAGTTCGCAGGTACCGATATCGAGATCAGGTGGAGCAAAGCGCTGGAG AGCGTTCGCAAGGACGTCGAGTGTTTTTTCGGCATCTTGAATGGCCGTTT TAGAATTTTGAAACTAGGAATTCTTTTCCAAAGCTTGGAAGACATCAACA ACATGTTCTTTACGTGTTGTACGTTGCACAACATGTTGCATGCGTTCGAT GGGCTTGATGAATTCGAGCCTACCGTGGAATGGGGGGGGAAGGAGGGTCT ACACGATCCCTGGGACAACCCGCCTCTGTTGGATGAAAGCACCACAGGAA GCACTAGCACATCGGTGGACGATGACAACGCCAACAAGAAGCCAGTACAA GAGCATTTCATATTGAAGAAAGCCCTCGTGGCACACTTTGAAGTGCGAAG ACAACAGAGAAGCATTCGGTGGCTTAAACACACAGCGCCTGGTCGCCGAC ACGCGTCTCGCAACGTTGAAATTGCCAACGTTGAGACTGCCTGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig79:142558..144801-

>mRNA_P-littoralis_Contig79.40.1 ID=mRNA_P-littoralis_Contig79.40.1|Name=mRNA_P-littoralis_Contig79.40.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1062bp|location=Sequence derived from alignment at P-littoralis_Contig79:142558..144801- (Pylaiella littoralis U1_48)
TTTTCTGATTGTCAGGTCCTGGCATCGCTGCACATACTTGGGAGGGGCAA
CTTCTTCGAGGATATGACCCAGATGTCTCACATTAGCGAGCCGACGATAC
AAATCACCTTTCACATGTTCAACAAGCTTTTCGCGCAAGAGTTCTACCAC
GACCACGTGCATCTGCCCACCGCCGGCGAGGACCAAGACCAGGTGATGAG
GCATTACGACCTACTGGGGTTTACTGGAGCAATCGGTTCGACTGATGTCA
CCCACATCAAATGGGCGGCTTGCCCGTATTCTTGGGCGAAGCACTACACG
GGAAAGGAAGGTTTCGCGACCATCGCCTTCCAGGCGATCGTGGATCACAC
TGGGCGTCTCCTGGCCGCGACAAAGGGCTTTGGTGGCTCGATGAACGACA
AGACCATCATCACGTACGACGCGGCCATCACTAAAATCCGCGAAGACCCG
GTCTACAAGGAGAAGGAGTACACTCTCTTCGACAAGCATGGTGAGCCGTT
CCAGCGAAAGGGCAACTACAGCATCGTCGACAATGGGTACAACAAGTGGG
AGATCCTCATCCCCCCTAGCAAGTTCGCAGGTACCGATATCGAGATCAGG
TGGAGCAAAGCGCTGGAGAGCGTTCGCAAGGACGTCGAGTGTTTTTTCGG
CATCTTGAATGGCCGTTTTAGAATTTTGAAACTAGGAATTCTTTTCCAAA
GCTTGGAAGACATCAACAACATGTTCTTTACGTGTTGTACGTTGCACAAC
ATGTTGCATGCGTTCGATGGGCTTGATGAATTCGAGCCTACCGTGGAATG
GGGGGGGAAGGAGGGTCTACACGATCCCTGGGACAACCCGCCTCTGTTGG
ATGAAAGCACCACAGGAAGCACTAGCACATCGGTGGACGATGACAACGCC
AACAAGAAGCCAGTACAAGAGCATTTCATATTGAAGAAAGCCCTCGTGGC
ACACTTTGAAGTGCGAAGACAACAGAGAAGCATTCGGTGGCTTAAACACA
CAGCGCCTGGTCGCCGACACGCGTCTCGCAACGTTGAAATTGCCAACGTT
GAGACTGCCTGA
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