prot_P-littoralis_Contig79.6.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig79.6.1
Unique Nameprot_P-littoralis_Contig79.6.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length325
Homology
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BLAST of mRNA_P-littoralis_Contig79.6.1 vs. uniprot
Match: A0A6H5L5R4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L5R4_9PHAE)

HSP 1 Score: 355 bits (911), Expect = 3.540e-119
Identity = 177/303 (58.42%), Postives = 219/303 (72.28%), Query Frame = 0 
Query:   31 VFLGCMAFCLACRRTGGEQQH-----HERDVGFEELAFEAAKHGMEVIPPEEWMNTRRRLQYAGSNCWDVSVTEPNGICDGLYEGDGDRDVYVSLRGPTLFVATCFEGD--CGEHLLAFNRRMFMALAFKCEEGQSTDCPKEEVWGVYSAITNSTTGENRLGFLRAWAEDALHPADVVTQWWTFQYTTLEEAAADSALECVHPDCLIAVNNVTIECE--SPNWTLPPSFTPLPTMVPIPDGTVGPLPTNAPL----SPEELGSFQGSD-LNGATS---------SRGGGGLWQGIGVIAVTAG 310
            + LGC+A+C  CR  GGE        +++ V  +EL  EA+K GMEVI P EWM++RRRL+Y GSNCWDV V+EP GICDG Y G+GDR+   +L GP+LF+ TCFE +  CG  L A NRRMFMA AFKC EG++ DCPKEEVWGVYSAITN+TTGENRLGFLRAWA+ ALHP DVV+QWWTFQY +LEE  A  + +C++ DCLI ++NV IEC   SPNWT PPS TP P+M P  DGT+ P+PTNAP+    S  E+GSF+ +D LNGA +            GGG+WQ +GV+A+TAG
Sbjct:    8 LLLGCLAWCALCRAIGGEYTQFGDDPNQQHVSLQELTEEASKVGMEVIHPAEWMHSRRRLEYTGSNCWDVVVSEPYGICDGTYIGEGDRESLATLMGPSLFLNTCFEPEQYCGGELSALNRRMFMARAFKCPEGETEDCPKEEVWGVYSAITNATTGENRLGFLRAWADGALHPVDVVSQWWTFQYNSLEEDDASESRDCLNTDCLIQLDNVNIECAPGSPNWTRPPSTTPYPSMAPDIDGTMAPIPTNAPVGESESSSEIGSFENADDLNGAQTRLKPPLRFPGLSGGGVWQAVGVVAMTAG 310
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig79.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L5R4_9PHAE3.540e-11958.42Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig79contigP-littoralis_Contig79:14423..35231 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig79.6.1mRNA_P-littoralis_Contig79.6.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig79 14245..37454 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig79.6.1 ID=prot_P-littoralis_Contig79.6.1|Name=mRNA_P-littoralis_Contig79.6.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=325bp
MSRSHGTQCKCAGSVARAHGSVSVMARGLRVFLGCMAFCLACRRTGGEQQ
HHERDVGFEELAFEAAKHGMEVIPPEEWMNTRRRLQYAGSNCWDVSVTEP
NGICDGLYEGDGDRDVYVSLRGPTLFVATCFEGDCGEHLLAFNRRMFMAL
AFKCEEGQSTDCPKEEVWGVYSAITNSTTGENRLGFLRAWAEDALHPADV
VTQWWTFQYTTLEEAAADSALECVHPDCLIAVNNVTIECESPNWTLPPSF
TPLPTMVPIPDGTVGPLPTNAPLSPEELGSFQGSDLNGATSSRGGGGLWQ
GIGVIAVTAGWWAVVGRMGAVGGG*
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