prot_P-littoralis_Contig79.3.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig79.3.1
Unique Nameprot_P-littoralis_Contig79.3.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length541
Homology
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BLAST of mRNA_P-littoralis_Contig79.3.1 vs. uniprot
Match: A0A6H5LCS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCS2_9PHAE)

HSP 1 Score: 604 bits (1557), Expect = 1.250e-209
Identity = 324/514 (63.04%), Postives = 374/514 (72.76%), Query Frame = 0 
Query:   34 QKVLGIFGIPVAWNVKDCTYDDSEDETYA-------PPISRNSSVAGAGAGSAPATRFTTAESVATRTAVVYGWFLADMRTICGLSEQYFRPPISRPQRQMPARRRRTGLASSAAQGGKGLKRWKHDEGGTQWMAELSTEVVLNGIIRPYLSSASKCALQRTCKDMGRLLGTPEAWETLDLKADVIGRRTMKSGRQSIMSRQPLFFLARSVVLQPRFSLLRTVDMRGLNLGAMGSTPDLLLTLFDSCRRITTLNLWKTYLEDEGMPQPDSSVEKVIAQHLPGVQHLALDMDASNRGLKVLLKGCTSLKSLHIGSRCNRRGDGISMYPNDLGLKEFAIVGAPRLETITLVDKVNIGAVGLRCLLDASTCPRLKTLILVRASRVNDRCLKAIAPRMGRVTSLTLDQCPITPSSVKFVLEKCPELANVVVSTEHGLVDRPEDGRAFLEFLLAQGPTKLSKIDLQRLAPREALAEDFPEWLSKDSALCTAVLGQRL-RIVIGSADTTDERIAPFMAGR 539
            +KV GIFGIPVAWNV+DC YDDSEDE+Y        PP       A A A     TR +T+ S ATR+ VV G                              RRR                       GT WMAELS +VVL+GIIRPYL S SKCALQRTC  M RLL +P+AWETLDL+A +IGRRTMKSGRQSI+SRQPLFFLARSVV QPRFSLL+TVDM+GLNLGAMGSTPDLL+TLF+SCR ITTLNLWKTY+EDE +PQP  SVE VIAQHLPGV+HLAL++D SNRGLKVLL+GCT LKSLHIGSR NR GD ISMYPNDLG+K F  VGAP LET+TLVDK NIGA GLRCLLD S CPRL+ L LVR  RVN+ CLKAIAP MGR+TSLTLDQC + PS+V+F+L+KCPEL ++VVST+HGL+ +P+ GRA LE+LLAQGP+KLSKI++QRL+ R ++  + P WL +D  LC  VLG    RIV+G A+T DERIAPFM GR
Sbjct:  142 RKVPGIFGIPVAWNVEDCDYDDSEDESYTQQSGGSGPPTVG----ATAFAAKCTKTRGSTSVSSATRSRVVRG-----------------------------GRRR-----------------------GTDWMAELSADVVLHGIIRPYLCSTSKCALQRTCNQMRRLLDSPDAWETLDLRAHIIGRRTMKSGRQSILSRQPLFFLARSVVQQPRFSLLKTVDMQGLNLGAMGSTPDLLVTLFESCRHITTLNLWKTYVEDERLPQPQFSVETVIAQHLPGVRHLALEVDDSNRGLKVLLEGCTRLKSLHIGSRSNRAGDSISMYPNDLGMKAFTTVGAPYLETLTLVDKFNIGAAGLRCLLDPSACPRLRKLTLVRTGRVNNHCLKAIAPAMGRLTSLTLDQCLVDPSTVQFILDKCPELTSIVVSTQHGLLQQPQGGRALLEYLLAQGPSKLSKIEVQRLSARGSVLGNVPHWLVQDPGLCATVLGWNSPRIVLGPAETVDERIAPFMVGR 599
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BLAST of mRNA_P-littoralis_Contig79.3.1 vs. uniprot
Match: D7FPP5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPP5_ECTSI)

HSP 1 Score: 577 bits (1487), Expect = 2.280e-202
Identity = 287/381 (75.33%), Postives = 329/381 (86.35%), Query Frame = 0 
Query:  160 MAELSTEVVLNGIIRPYLSSASKCALQRTCKDMGRLLGTPEAWETLDLKADVIGRRTMKSGRQSIMSRQPLFFLARSVVLQPRFSLLRTVDMRGLNLGAMGSTPDLLLTLFDSCRRITTLNLWKTYLEDEGMPQPDSSVEKVIAQHLPGVQHLALDMDASNRGLKVLLKGCTSLKSLHIGSRCNRRGDGISMYPNDLGLKEFAIVGAPRLETITLVDKVNIGAVGLRCLLDASTCPRLKTLILVRASRVNDRCLKAIAPRMGRVTSLTLDQCPITPSSVKFVLEKCPELANVVVSTEHGLVDRPEDGRAFLEFLLAQGPTKLSKIDLQRLAPREALAEDFPEWLSKDSALCTAVLGQ-RLRIVIGSADTTDERIAPFMAGR 539
            MAELSTEVVL+GIIRPYL S SKCALQRTC  M RLL TP+AWETLDL+A VIGRRTMKSGRQSI+SRQPLFFLARSVV QPRFSLL+TVDM+GLNLGAMGSTPDLL+TLF+SCR ITTLNLWKTY+EDE +PQP  SVE VIAQHLPGV HLAL++DASNRGL+VLL+GCT LKSLHIGSR N+ GD ISMYPNDLG+K F  VGAP LET+TLVDKVNIGA GLRCLL+ S CPRL+TL LVR  RVND CLKAIAP MGR+TSLTLDQCP+ PS+V+F+L+KCPEL ++VVST+HGL+ +P+DGRA LE+LLAQGP++LSKI++QRL+ R ++  + P WL +D  LC  VL     RIVIG A+T DERIAPFMAGR
Sbjct:    1 MAELSTEVVLHGIIRPYLCSTSKCALQRTCNQMHRLLDTPDAWETLDLRAHVIGRRTMKSGRQSILSRQPLFFLARSVVQQPRFSLLKTVDMQGLNLGAMGSTPDLLVTLFESCRHITTLNLWKTYVEDERLPQPQFSVETVIAQHLPGVHHLALEVDASNRGLRVLLEGCTRLKSLHIGSRSNQAGDSISMYPNDLGMKAFTAVGAPYLETLTLVDKVNIGAAGLRCLLNPSACPRLRTLTLVRTGRVNDHCLKAIAPAMGRLTSLTLDQCPVKPSTVQFILDKCPELTSMVVSTQHGLLQQPQDGRALLEYLLAQGPSRLSKIEVQRLSARGSVLGNVPYWLVQDPGLCATVLEWISPRIVIGPAETADERIAPFMAGR 381
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig79.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LCS2_9PHAE1.250e-20963.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPP5_ECTSI2.280e-20275.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 352..490
e-value: 8.3E-8
score: 33.5
coord: 153..351
e-value: 5.2E-15
score: 57.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..34
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 242..458

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig79contigP-littoralis_Contig79:6815..12198 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig79.3.1mRNA_P-littoralis_Contig79.3.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig79 5448..12936 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig79.3.1 ID=prot_P-littoralis_Contig79.3.1|Name=mRNA_P-littoralis_Contig79.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=541bp
MSGGCLPRNRSRSSKSRKNNDKKGNTRRSKSGPQKVLGIFGIPVAWNVKD
CTYDDSEDETYAPPISRNSSVAGAGAGSAPATRFTTAESVATRTAVVYGW
FLADMRTICGLSEQYFRPPISRPQRQMPARRRRTGLASSAAQGGKGLKRW
KHDEGGTQWMAELSTEVVLNGIIRPYLSSASKCALQRTCKDMGRLLGTPE
AWETLDLKADVIGRRTMKSGRQSIMSRQPLFFLARSVVLQPRFSLLRTVD
MRGLNLGAMGSTPDLLLTLFDSCRRITTLNLWKTYLEDEGMPQPDSSVEK
VIAQHLPGVQHLALDMDASNRGLKVLLKGCTSLKSLHIGSRCNRRGDGIS
MYPNDLGLKEFAIVGAPRLETITLVDKVNIGAVGLRCLLDASTCPRLKTL
ILVRASRVNDRCLKAIAPRMGRVTSLTLDQCPITPSSVKFVLEKCPELAN
VVVSTEHGLVDRPEDGRAFLEFLLAQGPTKLSKIDLQRLAPREALAEDFP
EWLSKDSALCTAVLGQRLRIVIGSADTTDERIAPFMAGRV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf