prot_P-littoralis_Contig79.1.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig79.1.2
Unique Nameprot_P-littoralis_Contig79.1.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length345
Homology
BLAST of mRNA_P-littoralis_Contig79.1.2 vs. uniprot
Match: D7FPP6_ECTSI (CSD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPP6_ECTSI)

HSP 1 Score: 264 bits (674), Expect = 1.080e-76
Identity = 133/161 (82.61%), Postives = 146/161 (90.68%), Query Frame = 0
Query:  181 ERWQKHAQIMSGKSGXXXXXXXXXXYHSQRHGKQNQRPEVSGEREQGRVCSLKDSFGFVRCMDRAGDLFFHLTEAPPNINVGDEVDFFVGMGSRGGKDCALKLNLLPPGTVTSEVVLDASFLGVVERDIRAYPSSMPSTHRANMMGRSRPHESQQAEGLIK 341
            ERWQKHAQ +SG+S XXXXX        QRHG+QNQRPE SGEREQGRVCS+K+SFGFVRCMDR GDLFFHLTEAPPNINVGDEVDFF+GMG+R GKDCALKLNLLPPGTV+SE++LDASFLGV+ERDIR+YPSSMPSTHRANMMGRSRP E QQ+EGLIK
Sbjct:  120 ERWQKHAQALSGRSXXXXXXYNA----QQRHGQQNQRPEASGEREQGRVCSIKESFGFVRCMDRPGDLFFHLTEAPPNINVGDEVDFFIGMGNRSGKDCALKLNLLPPGTVSSEIILDASFLGVIERDIRSYPSSMPSTHRANMMGRSRPQEYQQSEGLIK 276          
BLAST of mRNA_P-littoralis_Contig79.1.2 vs. uniprot
Match: A0A6H5L4Q3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Q3_9PHAE)

HSP 1 Score: 261 bits (666), Expect = 1.030e-74
Identity = 134/161 (83.23%), Postives = 148/161 (91.93%), Query Frame = 0
Query:  181 ERWQKHAQIMSGKSGXXXXXXXXXXYHSQRHGKQNQRPEVSGEREQGRVCSLKDSFGFVRCMDRAGDLFFHLTEAPPNINVGDEVDFFVGMGSRGGKDCALKLNLLPPGTVTSEVVLDASFLGVVERDIRAYPSSMPSTHRANMMGRSRPHESQQAEGLIK 341
            ERWQKHAQ +SG+  XXXXXXXX     QRHG+QNQRPE  GEREQGRVCS+K+SFGFVRCMDR GDLFFHLTEAPPNINVGDEVDFF+GMG+R GKDCALKLNLLPPGTV+SE++LDASFLGV+ERDIR++PSSMPSTHRANMMGRSRP ESQQ+EGLIK
Sbjct:  118 ERWQKHAQALSGRXXXXXXXXXXA---QQRHGQQNQRPEAGGEREQGRVCSIKESFGFVRCMDRPGDLFFHLTEAPPNINVGDEVDFFIGMGNRSGKDCALKLNLLPPGTVSSEIILDASFLGVIERDIRSHPSSMPSTHRANMMGRSRPQESQQSEGLIK 275          
BLAST of mRNA_P-littoralis_Contig79.1.2 vs. uniprot
Match: A0A7S2SQY9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQY9_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 3.400e-20
Identity = 49/87 (56.32%), Postives = 65/87 (74.71%), Query Frame = 0
Query:  224 REQGRVCSLKDSFGFVRCMDRAGDLFFHLTEAPPNINVGDEVDFFVGMGSRGGKDCALKLNLLPPGTVTSEVVLDASFLGVVERDIR 310
            RE G+V SLK+ FGF+RC+ R GDLFFH++EAP +I VGDEV+F V   SR G+ CA  ++ LP GTV  E VL+ S++G+V+R IR
Sbjct:   26 RECGKVKSLKEKFGFIRCVGRPGDLFFHISEAPRDIEVGDEVEFAVDT-SRDGRLCAKAIDTLPRGTVQFEDVLETSYVGIVDRGIR 111          
BLAST of mRNA_P-littoralis_Contig79.1.2 vs. uniprot
Match: A0A5D6XH35_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XH35_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 1.170e-16
Identity = 48/104 (46.15%), Postives = 65/104 (62.50%), Query Frame = 0
Query:  224 REQGRVCSLKDSFGFVRCMDRAGDLFFHLTEAPPNINVGDEVDFFVGMGSRGGKDCALKLNLLPPGTVTSEVVLDASFLGVVERDIRAYPS------SMPSTHR 321
            +EQG V ++K+SFGFV CMDR GDLFFH+TEAP ++ + DEV+F V    R  ++ A +L  LP G++  E V D    GVV R +R+ P+      S P T R
Sbjct:  148 KEQGVVIAIKESFGFVSCMDRDGDLFFHITEAPVDVQLHDEVEFRVKFNQRSSREMACQLVALPKGSIVQEDVADEFLDGVVTRALRSAPNYHNASDSRPQTQR 251          
BLAST of mRNA_P-littoralis_Contig79.1.2 vs. uniprot
Match: K3WP78_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WP78_GLOUD)

HSP 1 Score: 90.9 bits (224), Expect = 2.970e-16
Identity = 47/117 (40.17%), Postives = 69/117 (58.97%), Query Frame = 0
Query:  225 EQGRVCSLKDSFGFVRCMDRAGDLFFHLTEAPPNINVGDEVDFFVGMGSRGGKDCALKLNLLPPGTVTSEVVLDASFLGVVERDIRAYPSSMPSTHRANMMGRSRPHESQQAEGLIK 341
            E+G V S+K+SFGFV C+DR GDLFFH+TEAP ++ + DEV+F +    R  KD A +L  LP GT+  E + +  F G+V R +R+  S     + A         + ++  GLI+
Sbjct:  174 EKGIVVSIKESFGFVSCVDREGDLFFHITEAPVDVQLQDEVEFRIKYNQRSAKDIACQLVTLPKGTIVLEDISEEFFEGIVTRGVRSSSSYSSXXYDARQQ-----QQREETHGLIE 285          
BLAST of mRNA_P-littoralis_Contig79.1.2 vs. uniprot
Match: A0A3F2RIS8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RIS8_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 8.100e-15
Identity = 41/85 (48.24%), Postives = 57/85 (67.06%), Query Frame = 0
Query:  225 EQGRVCSLKDSFGFVRCMDRAGDLFFHLTEAPPNINVGDEVDFFVGMGSRGGKDCALKLNLLPPGTVTSEVVLDASFLGVVERDI 309
            EQG V S+KDSFGFV CM+R GDLFFH++EAP ++ + DEV+F +    R  K+ A +L  LP GT+  E + +  F GVV + +
Sbjct:  186 EQGFVVSIKDSFGFVSCMEREGDLFFHISEAPVDVQLQDEVEFRIKHNQRSDKEMACQLVALPKGTIVVEDITEEFFNGVVTKSL 270          
BLAST of mRNA_P-littoralis_Contig79.1.2 vs. uniprot
Match: A0A484E9J3_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E9J3_BRELC)

HSP 1 Score: 85.9 bits (211), Expect = 1.350e-14
Identity = 49/130 (37.69%), Postives = 72/130 (55.38%), Query Frame = 0
Query:  212 GKQNQRPEVSGEREQGRVCSLKDSFGFVRCMDRAGDLFFHLTEAPPNINVGDEVDFFVGMGSRGGKDCALKLNLLPPGTVTSEVVLDASFLGVVERDIRAYPSSMPSTHRANMMGRSRPHESQQAEGLIK 341
            G++   P      EQG V S+K+SFGFV  ++R GDLFFH++EAP  I V DEV+F +    R  K+ A +L  LP GT+  E + D  +LG+V + +   P    S   +N   R +    ++  GLI+
Sbjct:  137 GRRGSSPSRVTPAEQGFVVSIKESFGFVSSLERDGDLFFHISEAPVEIQVHDEVEFQIKYNQRSDKEMACQLVALPKGTIQVEEISDDFYLGIVTKSLSLGPHQGGSRGYSN--NRDQDRRLREEHGLIE 264          
BLAST of mRNA_P-littoralis_Contig79.1.2 vs. uniprot
Match: A0A662X4D1_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X4D1_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 2.520e-14
Identity = 47/118 (39.83%), Postives = 71/118 (60.17%), Query Frame = 0
Query:  225 EQGRVCSLKDSFGFVRCMDRAGDLFFHLTEAPPNINVGDEVDFFVGMGSRGGKDCALKLNLLPPGTVTSEVVLDASFLGVVERDIRAYPSSMPSTHRANMMGRSRPHESQQAEGLIKA 342
            E+G V S+K++FGFV CM+R GDLFFH+TEAP ++ + DEV+F V    R  K+ A +L  LP GT+  E V +  F GVV + +   P    +++ +     +R  +  +  GLI+A
Sbjct:  293 ERGFVVSIKENFGFVSCMEREGDLFFHITEAPVDVQLQDEVEFRVKYNQRSDKEMACQLVGLPKGTIVVEDVSEEFFDGVVTKSL---PRGGNNSYNSYNRDDTRHSQRDEPHGLIEA 407          
BLAST of mRNA_P-littoralis_Contig79.1.2 vs. uniprot
Match: A0A3R7K7D7_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K7D7_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 3.310e-14
Identity = 40/84 (47.62%), Postives = 56/84 (66.67%), Query Frame = 0
Query:  226 QGRVCSLKDSFGFVRCMDRAGDLFFHLTEAPPNINVGDEVDFFVGMGSRGGKDCALKLNLLPPGTVTSEVVLDASFLGVVERDI 309
            QG V S+KDSFGFV CM+R GDLFFH++EAP ++ + DEV+F +    R  K+ A +L  LP GT+  E + +  F GVV + +
Sbjct:   86 QGFVVSIKDSFGFVSCMEREGDLFFHISEAPVDVQLQDEVEFRIKHNQRSDKEMACQLVALPKGTIVVEDITEEFFNGVVTKSL 169          
BLAST of mRNA_P-littoralis_Contig79.1.2 vs. uniprot
Match: M4C6A3_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C6A3_HYAAE)

HSP 1 Score: 84.3 bits (207), Expect = 4.100e-14
Identity = 47/115 (40.87%), Postives = 67/115 (58.26%), Query Frame = 0
Query:  229 VCSLKDSFGFVRCMDRAGDLFFHLTEAPPNINVGDEVDFFVGMGSRGGKDCALKLNLLPPGTVTSEVVLDASFLGVVERDIRAYPSSMPSTHRANMMG--RSRPHESQQAEGLIK 341
            + S+K++FGFV C+DR GDLFFH++EAP +I + DEV+F V    R  KD A +L  LP GT+  EV+ D    G+V +       S+P   R N  G      H +++  GLI+
Sbjct:    1 MVSIKETFGFVSCLDREGDLFFHISEAPVDIQLHDEVEFRVKYNQRSDKDVACQLVALPKGTIKVEVINDEVIDGIVTK-------SLPRGGRGNGRGSFNGDRHHNREEHGLIE 108          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig79.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPP6_ECTSI1.080e-7682.61CSD domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L4Q3_9PHAE1.030e-7483.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2SQY9_9STRA3.400e-2056.32Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A5D6XH35_9STRA1.170e-1646.15Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
K3WP78_GLOUD2.970e-1640.17Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A3F2RIS8_9STRA8.100e-1548.24Uncharacterized protein n=1 Tax=Phytophthora kerno... [more]
A0A484E9J3_BRELC1.350e-1437.69Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A662X4D1_9STRA2.520e-1439.83Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A3R7K7D7_9STRA3.310e-1447.62Uncharacterized protein (Fragment) n=2 Tax=Phytoph... [more]
M4C6A3_HYAAE4.100e-1440.87Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011129Cold shock domainSMARTSM00357csp_8coord: 226..286
e-value: 3.3E-4
score: 30.0
IPR002059Cold-shock protein, DNA-bindingPFAMPF00313CSDcoord: 226..276
e-value: 4.1E-6
score: 26.5
IPR002059Cold-shock protein, DNA-bindingPROSITEPS51857CSD_2coord: 224..285
score: 14.136621
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 223..292
e-value: 7.2E-18
score: 66.3
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 223..290
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..156
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..226
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 324..344
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 212..226
NoneNo IPR availablePANTHERPTHR12913UNR PROTEIN N-RAS UPSTREAM GENE PROTEINcoord: 205..328
NoneNo IPR availablePANTHERPTHR12913:SF1COLD SHOCK DOMAIN-CONTAINING PROTEIN E1coord: 205..328

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig79contigP-littoralis_Contig79:136..5042 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig79.1.2mRNA_P-littoralis_Contig79.1.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig79 136..5289 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig79.1.2 ID=prot_P-littoralis_Contig79.1.2|Name=mRNA_P-littoralis_Contig79.1.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=345bp
MDRRHNGGGGDYGHDGGGPGRVGGNRSSFERRPNQDGQEDGGGGGGGGGD
GGRWQNDMYDSNAQQPRRSHGGGGDDYRERGGYQHDQRDQRGDGGRRRSR
GYGGGGREGGFGGGGGRRDNHRGGGGGGGGGYRENQEQTNNGFGGQSAQQ
NWPTPGGASAGGGDGNAGDRGAGEGGGNGSERWQKHAQIMSGKSGGGGGG
GGGGGYHSQRHGKQNQRPEVSGEREQGRVCSLKDSFGFVRCMDRAGDLFF
HLTEAPPNINVGDEVDFFVGMGSRGGKDCALKLNLLPPGTVTSEVVLDAS
FLGVVERDIRAYPSSMPSTHRANMMGRSRPHESQQAEGLIKARN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011129CSD
IPR002059CSP_DNA-bd
IPR012340NA-bd_OB-fold