mRNA_P-littoralis_Contig79.1.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig79.1.2
Unique NamemRNA_P-littoralis_Contig79.1.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig79.1.2 vs. uniprot
Match: D7FPP6_ECTSI (CSD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPP6_ECTSI)

HSP 1 Score: 264 bits (674), Expect = 1.530e-75
Identity = 133/161 (82.61%), Postives = 146/161 (90.68%), Query Frame = 2 
Query:  788 ERWQKHAQIMSGKSGXXXXXXXXXXYHSQRHGKQNQRPEVSGEREQGRVCSLKDSFGFVRCMDRAGDLFFHLTEAPPNINVGDEVDFFVGMGSRGGKDCALKLNLLPPGTVTSEVVLDASFLGVVERDIRAYPSSMPSTHRANMMGRSRPHESQQAEGLIK 1270
            ERWQKHAQ +SG+S XXXXX        QRHG+QNQRPE SGEREQGRVCS+K+SFGFVRCMDR GDLFFHLTEAPPNINVGDEVDFF+GMG+R GKDCALKLNLLPPGTV+SE++LDASFLGV+ERDIR+YPSSMPSTHRANMMGRSRP E QQ+EGLIK
Sbjct:  120 ERWQKHAQALSGRSXXXXXXYNA----QQRHGQQNQRPEASGEREQGRVCSIKESFGFVRCMDRPGDLFFHLTEAPPNINVGDEVDFFIGMGNRSGKDCALKLNLLPPGTVSSEIILDASFLGVIERDIRSYPSSMPSTHRANMMGRSRPQEYQQSEGLIK 276
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BLAST of mRNA_P-littoralis_Contig79.1.2 vs. uniprot
Match: A0A6H5L4Q3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Q3_9PHAE)

HSP 1 Score: 261 bits (666), Expect = 1.460e-73
Identity = 134/161 (83.23%), Postives = 148/161 (91.93%), Query Frame = 2 
Query:  788 ERWQKHAQIMSGKSGXXXXXXXXXXYHSQRHGKQNQRPEVSGEREQGRVCSLKDSFGFVRCMDRAGDLFFHLTEAPPNINVGDEVDFFVGMGSRGGKDCALKLNLLPPGTVTSEVVLDASFLGVVERDIRAYPSSMPSTHRANMMGRSRPHESQQAEGLIK 1270
            ERWQKHAQ +SG+  XXXXXXXX     QRHG+QNQRPE  GEREQGRVCS+K+SFGFVRCMDR GDLFFHLTEAPPNINVGDEVDFF+GMG+R GKDCALKLNLLPPGTV+SE++LDASFLGV+ERDIR++PSSMPSTHRANMMGRSRP ESQQ+EGLIK
Sbjct:  118 ERWQKHAQALSGRXXXXXXXXXXA---QQRHGQQNQRPEAGGEREQGRVCSIKESFGFVRCMDRPGDLFFHLTEAPPNINVGDEVDFFIGMGNRSGKDCALKLNLLPPGTVSSEIILDASFLGVIERDIRSHPSSMPSTHRANMMGRSRPQESQQSEGLIK 275
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BLAST of mRNA_P-littoralis_Contig79.1.2 vs. uniprot
Match: A0A7S2SQY9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQY9_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 9.510e-20
Identity = 49/87 (56.32%), Postives = 65/87 (74.71%), Query Frame = 2 
Query:  917 REQGRVCSLKDSFGFVRCMDRAGDLFFHLTEAPPNINVGDEVDFFVGMGSRGGKDCALKLNLLPPGTVTSEVVLDASFLGVVERDIR 1177
            RE G+V SLK+ FGF+RC+ R GDLFFH++EAP +I VGDEV+F V   SR G+ CA  ++ LP GTV  E VL+ S++G+V+R IR
Sbjct:   26 RECGKVKSLKEKFGFIRCVGRPGDLFFHISEAPRDIEVGDEVEFAVDT-SRDGRLCAKAIDTLPRGTVQFEDVLETSYVGIVDRGIR 111
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BLAST of mRNA_P-littoralis_Contig79.1.2 vs. uniprot
Match: A0A5D6XH35_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XH35_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 3.680e-16
Identity = 48/104 (46.15%), Postives = 65/104 (62.50%), Query Frame = 2 
Query:  917 REQGRVCSLKDSFGFVRCMDRAGDLFFHLTEAPPNINVGDEVDFFVGMGSRGGKDCALKLNLLPPGTVTSEVVLDASFLGVVERDIRAYPS------SMPSTHR 1210
            +EQG V ++K+SFGFV CMDR GDLFFH+TEAP ++ + DEV+F V    R  ++ A +L  LP G++  E V D    GVV R +R+ P+      S P T R
Sbjct:  148 KEQGVVIAIKESFGFVSCMDRDGDLFFHITEAPVDVQLHDEVEFRVKFNQRSSREMACQLVALPKGSIVQEDVADEFLDGVVTRALRSAPNYHNASDSRPQTQR 251
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BLAST of mRNA_P-littoralis_Contig79.1.2 vs. uniprot
Match: K3WP78_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WP78_GLOUD)

HSP 1 Score: 90.9 bits (224), Expect = 9.260e-16
Identity = 47/117 (40.17%), Postives = 69/117 (58.97%), Query Frame = 2 
Query:  920 EQGRVCSLKDSFGFVRCMDRAGDLFFHLTEAPPNINVGDEVDFFVGMGSRGGKDCALKLNLLPPGTVTSEVVLDASFLGVVERDIRAYPSSMPSTHRANMMGRSRPHESQQAEGLIK 1270
            E+G V S+K+SFGFV C+DR GDLFFH+TEAP ++ + DEV+F +    R  KD A +L  LP GT+  E + +  F G+V R +R+  S     + A         + ++  GLI+
Sbjct:  174 EKGIVVSIKESFGFVSCVDREGDLFFHITEAPVDVQLQDEVEFRIKYNQRSAKDIACQLVTLPKGTIVLEDISEEFFEGIVTRGVRSSSSYSSXXYDARQQ-----QQREETHGLIE 285
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BLAST of mRNA_P-littoralis_Contig79.1.2 vs. uniprot
Match: A0A3F2RIS8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RIS8_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 2.370e-14
Identity = 41/85 (48.24%), Postives = 57/85 (67.06%), Query Frame = 2 
Query:  920 EQGRVCSLKDSFGFVRCMDRAGDLFFHLTEAPPNINVGDEVDFFVGMGSRGGKDCALKLNLLPPGTVTSEVVLDASFLGVVERDI 1174
            EQG V S+KDSFGFV CM+R GDLFFH++EAP ++ + DEV+F +    R  K+ A +L  LP GT+  E + +  F GVV + +
Sbjct:  186 EQGFVVSIKDSFGFVSCMEREGDLFFHISEAPVDVQLQDEVEFRIKHNQRSDKEMACQLVALPKGTIVVEDITEEFFNGVVTKSL 270
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BLAST of mRNA_P-littoralis_Contig79.1.2 vs. uniprot
Match: A0A484E9J3_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E9J3_BRELC)

HSP 1 Score: 85.9 bits (211), Expect = 3.810e-14
Identity = 49/130 (37.69%), Postives = 72/130 (55.38%), Query Frame = 2 
Query:  881 GKQNQRPEVSGEREQGRVCSLKDSFGFVRCMDRAGDLFFHLTEAPPNINVGDEVDFFVGMGSRGGKDCALKLNLLPPGTVTSEVVLDASFLGVVERDIRAYPSSMPSTHRANMMGRSRPHESQQAEGLIK 1270
            G++   P      EQG V S+K+SFGFV  ++R GDLFFH++EAP  I V DEV+F +    R  K+ A +L  LP GT+  E + D  +LG+V + +   P    S   +N   R +    ++  GLI+
Sbjct:  137 GRRGSSPSRVTPAEQGFVVSIKESFGFVSSLERDGDLFFHISEAPVEIQVHDEVEFQIKYNQRSDKEMACQLVALPKGTIQVEEISDDFYLGIVTKSLSLGPHQGGSRGYSN--NRDQDRRLREEHGLIE 264
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BLAST of mRNA_P-littoralis_Contig79.1.2 vs. uniprot
Match: A0A662X4D1_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X4D1_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 7.080e-14
Identity = 47/118 (39.83%), Postives = 71/118 (60.17%), Query Frame = 2 
Query:  920 EQGRVCSLKDSFGFVRCMDRAGDLFFHLTEAPPNINVGDEVDFFVGMGSRGGKDCALKLNLLPPGTVTSEVVLDASFLGVVERDIRAYPSSMPSTHRANMMGRSRPHESQQAEGLIKA 1273
            E+G V S+K++FGFV CM+R GDLFFH+TEAP ++ + DEV+F V    R  K+ A +L  LP GT+  E V +  F GVV + +   P    +++ +     +R  +  +  GLI+A
Sbjct:  293 ERGFVVSIKENFGFVSCMEREGDLFFHITEAPVDVQLQDEVEFRVKYNQRSDKEMACQLVGLPKGTIVVEDVSEEFFDGVVTKSL---PRGGNNSYNSYNRDDTRHSQRDEPHGLIEA 407
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BLAST of mRNA_P-littoralis_Contig79.1.2 vs. uniprot
Match: A0A3R7K7D7_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K7D7_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 9.170e-14
Identity = 40/84 (47.62%), Postives = 56/84 (66.67%), Query Frame = 2 
Query:  923 QGRVCSLKDSFGFVRCMDRAGDLFFHLTEAPPNINVGDEVDFFVGMGSRGGKDCALKLNLLPPGTVTSEVVLDASFLGVVERDI 1174
            QG V S+KDSFGFV CM+R GDLFFH++EAP ++ + DEV+F +    R  K+ A +L  LP GT+  E + +  F GVV + +
Sbjct:   86 QGFVVSIKDSFGFVSCMEREGDLFFHISEAPVDVQLQDEVEFRIKHNQRSDKEMACQLVALPKGTIVVEDITEEFFNGVVTKSL 169
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BLAST of mRNA_P-littoralis_Contig79.1.2 vs. uniprot
Match: M4C6A3_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C6A3_HYAAE)

HSP 1 Score: 84.3 bits (207), Expect = 1.100e-13
Identity = 47/115 (40.87%), Postives = 67/115 (58.26%), Query Frame = 2 
Query:  932 VCSLKDSFGFVRCMDRAGDLFFHLTEAPPNINVGDEVDFFVGMGSRGGKDCALKLNLLPPGTVTSEVVLDASFLGVVERDIRAYPSSMPSTHRANMMG--RSRPHESQQAEGLIK 1270
            + S+K++FGFV C+DR GDLFFH++EAP +I + DEV+F V    R  KD A +L  LP GT+  EV+ D    G+V +       S+P   R N  G      H +++  GLI+
Sbjct:    1 MVSIKETFGFVSCLDREGDLFFHISEAPVDIQLHDEVEFRVKYNQRSDKDVACQLVALPKGTIKVEVINDEVIDGIVTK-------SLPRGGRGNGRGSFNGDRHHNREEHGLIE 108
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig79.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPP6_ECTSI1.530e-7582.61CSD domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L4Q3_9PHAE1.460e-7383.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2SQY9_9STRA9.510e-2056.32Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A5D6XH35_9STRA3.680e-1646.15Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
K3WP78_GLOUD9.260e-1640.17Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A3F2RIS8_9STRA2.370e-1448.24Uncharacterized protein n=1 Tax=Phytophthora kerno... [more]
A0A484E9J3_BRELC3.810e-1437.69Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A662X4D1_9STRA7.080e-1439.83Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A3R7K7D7_9STRA9.170e-1447.62Uncharacterized protein (Fragment) n=2 Tax=Phytoph... [more]
M4C6A3_HYAAE1.100e-1340.87Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig79contigP-littoralis_Contig79:136..5289 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FPP6
Preferred nameCSDE1
PFAMsCSD,R3H,SUZ-C
Model size1282
Max annot lvl2759|Eukaryota
KEGG koko:K19721
KEGG Pathwayko04974,map04974
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000956,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005829,GO:0005886,GO:0006139,GO:0006401,GO:0006402,GO:0006417,GO:0006725,GO:0006807,GO:0007275,GO:0007548,GO:0007549,GO:0008150,GO:0008152,GO:0008406,GO:0008584,GO:0009047,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0012505,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0017148,GO:0019222,GO:0019439,GO:0022414,GO:0022607,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032991,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034655,GO:0040029,GO:0042714,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0045137,GO:0046483,GO:0046546,GO:0046661,GO:0046700,GO:0048513,GO:0048519,GO:0048523,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0061458,GO:0065003,GO:0065007,GO:0070937,GO:0070966,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:2000112,GO:2000113
Exons7
Evalue1.77e-77
EggNOG OGs28K4H@1|root,2QSJ1@2759|Eukaryota
Descriptionnuclear-transcribed mRNA catabolic process, no-go decay
Cds size1035
COG categoryS
BRITEko00000,ko00001,ko00536
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig79.1.2prot_P-littoralis_Contig79.1.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig79 136..5042 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791615.1950421-CDS-P-littoralis_Contig79:135..2751680791615.1950421-CDS-P-littoralis_Contig79:135..275Pylaiella littoralis U1_48CDSP-littoralis_Contig79 136..275 -
1680791615.2103977-CDS-P-littoralis_Contig79:742..8161680791615.2103977-CDS-P-littoralis_Contig79:742..816Pylaiella littoralis U1_48CDSP-littoralis_Contig79 743..816 -
1680791615.2201853-CDS-P-littoralis_Contig79:1047..12181680791615.2201853-CDS-P-littoralis_Contig79:1047..1218Pylaiella littoralis U1_48CDSP-littoralis_Contig79 1048..1218 -
1680791615.2312958-CDS-P-littoralis_Contig79:1341..16381680791615.2312958-CDS-P-littoralis_Contig79:1341..1638Pylaiella littoralis U1_48CDSP-littoralis_Contig79 1342..1638 -
1680791615.2435606-CDS-P-littoralis_Contig79:2256..24141680791615.2435606-CDS-P-littoralis_Contig79:2256..2414Pylaiella littoralis U1_48CDSP-littoralis_Contig79 2257..2414 -
1680791615.2639234-CDS-P-littoralis_Contig79:4293..43961680791615.2639234-CDS-P-littoralis_Contig79:4293..4396Pylaiella littoralis U1_48CDSP-littoralis_Contig79 4294..4396 -
1680791615.2754474-CDS-P-littoralis_Contig79:4950..50421680791615.2754474-CDS-P-littoralis_Contig79:4950..5042Pylaiella littoralis U1_48CDSP-littoralis_Contig79 4951..5042 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791615.2858121-UTR-P-littoralis_Contig79:5042..52891680791615.2858121-UTR-P-littoralis_Contig79:5042..5289Pylaiella littoralis U1_48UTRP-littoralis_Contig79 5043..5289 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig79.1.2

>prot_P-littoralis_Contig79.1.2 ID=prot_P-littoralis_Contig79.1.2|Name=mRNA_P-littoralis_Contig79.1.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=345bp
MDRRHNGGGGDYGHDGGGPGRVGGNRSSFERRPNQDGQEDGGGGGGGGGD
GGRWQNDMYDSNAQQPRRSHGGGGDDYRERGGYQHDQRDQRGDGGRRRSR
GYGGGGREGGFGGGGGRRDNHRGGGGGGGGGYRENQEQTNNGFGGQSAQQ
NWPTPGGASAGGGDGNAGDRGAGEGGGNGSERWQKHAQIMSGKSGGGGGG
GGGGGYHSQRHGKQNQRPEVSGEREQGRVCSLKDSFGFVRCMDRAGDLFF
HLTEAPPNINVGDEVDFFVGMGSRGGKDCALKLNLLPPGTVTSEVVLDAS
FLGVVERDIRAYPSSMPSTHRANMMGRSRPHESQQAEGLIKARN*
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mRNA from alignment at P-littoralis_Contig79:136..5289-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig79.1.2 ID=mRNA_P-littoralis_Contig79.1.2|Name=mRNA_P-littoralis_Contig79.1.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=5154bp|location=Sequence derived from alignment at P-littoralis_Contig79:136..5289- (Pylaiella littoralis U1_48)
GCCCGAACGCACGCTACACGTGGGGAAGCTGCACCCACCTGGACGTGAGG
TCTTCTCAAACCCCGTAGACGCTTGAAATAATCTGGTACACACCACGCTG
TCAGACGTAAACATCTTGCAGGTACAAGGAAGGTCCAGCGCGTGGCTGGC
GAAGACCCCACGGGAACATATCATTTTCTCATAGGATCTCACCCAACAGC
ACAGCACTGCTGCTGTTGCACTCAGCGAAGAGACCTCTGCAGCAGCAATG
GACAGGCGACATAACGGGGGTGGTGGCGATTATGGTCATGATGGCGGAGG
ACCAGGAAGAGTAGGCGGCAATCGTTCCTCCTTCGAACGGTGAGAGAGCT
GTTTGTAACTTACCGGTATCAACTGTTCTGCGGACACCACCTTCGCACTC
TCGGCGGCTTTCTTTGATCCATAGTTACATACTGTATCATACATACGCGC
ACAGCAGTACACGAACGTCTTCGCTCACCCGGGTACTTGGAGGAACGTGC
GCCAAATATGAGTGCCGCGTTAGTGCACAGCTCTAAGGATATCTCGAAGC
CTGTCCATGCGACAAGCATTTCGTTTCATGTAAATCTCGGGCTTGTCGGC
AGGCATGTTTATCTTGGGTATAGTTCAGTTGCGAGTGTCACCTGCAAACA
TGACGAACTTGTTTCAAGAGCAGGGCTCCATCCAGCCCACGTATTTTCCC
TCCTCGGCGTGCAGCGAAAGCTCGGCTGGTTCAAACTACAACAGTCGCGA
GTACTGCGTTGATGTGATGTTGACGGCAGTCAGAGTGAGCACATGTATCC
TGGAGCTTCACTCGTGATAATGCCAACGGCCTCTACCGCCGCACCTTCGT
TTCCGCTCCTGTGCACATCTATTTGCTCCATCACACGACCCAGGAGACCA
AACCAGGACGGCCAGGAGGACGGCGGTGGTGGAGGTGGTGGTGGTGGAGA
TGGAGGCCGGTGGCAAAACGACATGTACGACAGCAACGCCCAACAGGTGA
ACATACAGATTCTCTTTCACCAAAACTCACCTCTGGGTTTGTTTTTGCGA
TATGTTCCGTCACGGCGCAAGTTCGATCCGTGTGGTGTGCGCTCCGCGTC
ACGGCGAACGAACACGAACGGACGTACAACACAGATGAGACACAAAGCAC
GAGAGGAAACGCACCGTCCGTACGCAGCGCAATTTTCACGTCCAAAACCT
TTCAAAAGTCAACTTGACTGTCCTCGACGAAGACGTGCTTTAATTGCTGC
TTTATCGTTGTGAGCATGACACAACGAAATGACCTCCGCTGTATATGTTC
CTGTATGAAGCTGCATTACGGCGTGGGTTGTTATCCGTTTCGCATTTGTA
TAGTTGTGTAGTCTGCTCTACTGCTGCACAGCTGCCAGGTGCCAACTTCG
ACCCCACCCAACCCGTTACGTCTGCACTCTGAGCCCGACAACGCAAAAAT
TGAAAAACCCATGGAGGTGCCTTAGGTGCTCAGGCATTGCATTAGTTTAA
GCCTCTCCTACACCCCTCTTCTTTCACGTACTAACCCCCTCCTCTCAGAG
AAGGGTTTGGGCTGTGCAAGAGTCAAGTGAAGGATGTGAGGGCCTGTTTT
AAGGGAAAATGTGACACCCGGATTGGAGGCCCAATTTGGACAGACCTATG
ATATTAGCTTTTATGGAAAAAAGACACATGTCGTTTTAACGAAAAATGTG
ACACCCGGGTTGGTGGAGCAGTTGTAGCTGGTCTGCGTTCCGAAGATGCG
ACGTACATGAAAACCCATGGAAGCAACTGCGGTTGACAGCAGGCGGTTGA
ACGCCAGCGCCGACTACACAAACAATGTACTAACTGGTGTACTTGCAACT
ATAGAACGCGCATTCACGCGCAAGTATTAGAGACTACCTAGCGTCCGCCG
ACAAGCGGCGGTAGGAGCCATGCTCAGGAGGCAGGGCACTATCTGCTACC
AGCTGGCTTTAGTTCATGATCCATGTCGCAGCCATCTCGGCACCTACCAG
AATTGTGTGTATATAATCATATGTACGCGCGCGTGTGTGTGTATTGTGAG
TGTGAGTGTGGGTGTGGGTGTGGGTGTGAGTGCTCCCCGCAGGCCTGCCA
GCTGCAGCAGCACAGCTGCTTTCTGCTAGCTTCGTGCGTGTTTTTTGTCG
GTCTCTTTGGTCAAAAACACTACTACTGCTGAGCTGTACTGCTGTACACG
AAACTTGTTGTCATTTCATCCACTGCCTTTCGGTTCTCGCACCAACTCCC
TTGGCCATTCCAACTCCGATTCGACGGATTCCAATAGTCAACCTCTCGAG
AGGTTGATTTGTTTTGAGGAAAAAGCTAGCCCCGTGGGATGCGAAAGCTA
GCCCCGTAGAATGCAAAGTTGATTGACCAATCAGAAGCAATTCCAAATCC
AACTAGCTTTCCAATCCGGGTGTCACTTTTTCCGTTAAAACAAGCCCTGA
CAACAATGAGAGATAAAGGCCATTGTTGGGACAGAAGGTTAAAGATGAAC
AACACTTGGCGATACATGGTAGATGGGCAGGTGCGAGAGATGATGTGGGT
GAAAATGTATCTGAACGGCTCAATAAAATATGCCAAAAACTGACATTCGA
GGGCAAACACGAAGAGGGTCAAAAATACAAAAATTCGCACATTGTAGATA
AAGTGCAGTACGTACATGTCTATCATGGAGCGCCCGAATGCTCGTGGTGA
CTCTAGTTGGAGTTGTGACGGTGCCCCCTCCATCTCGAAAGGGATGCGTG
GTAAATAGTCACTTGGCGGACCCAAGCAGCAATGGAGTTCCCCTTGCCCC
CTCTCTCACACGCGTCTCTCCCTTCCCCAATTTTTCGGCCTTGAATGATT
GTCATACATACTATACCTTCAACAGCCTCGGAGAAGCCACGGTGGTGGCG
GAGATGACTATCGGGAAAGAGGCGGCTACCAGCACGACCAGCGTGATCAA
AGGGGAGACGGAGGAAGGAGAAGGTCGCGCGGTTACGGCGGTGGGGGGAG
GGAAGGGGGCTTTGGCGGCGGCGGTGGAAGACGGTGAGCAACCCCGCGAA
TTCGGCGTTGTGTTACCTGCACATTCTCTTTTGCGGACTGCCGGTCCACG
TTGTCAAGAAAATGTCTTGGTTGTGGTTGCCTCTTGCAGTGCTCTTGCTC
GCATTGCTTAGAGCCCTTTTTCATCAGGTAGAACACCGACTGAGCGGTCT
AAAGAGAAAGCCAATGTGGCCTTGCCAATGTACTGTACCGTGCCGCACAT
TGCGGCAGTGCTGGGCGTTTTTTAACCAAGTTATTCTCACTTGGTTACTC
GCGATTTCAGTGCAGTACACGCACTCGACTTGTTTCTTCCTGGTTTAGTC
AGCGTGGCATGAGGACAAGCAGCTGCCAACGTCTCAGGAATTCAGACTCG
ACGGCCATGCTCAGCTCATAACAGCAGCCCGCCTGTCCCATATTCACGCT
TGAATGTTGTCTATATCCCCCCCCCCGCCACCCTTTCCTCGCCACCGGGC
GATTATTCGAGTCTAAGGCAACGGTCTCAGTTGAAAACGAAACATCCGAC
CGCGAGACAGACACCTTCATCAACCCCATTCGCCCTCCACCTGCCACTTT
TCTTCCAATTCATTTTTTTGCGTTGACGGTCGTCTTGCGAATGTGTCTCA
GCGACAACCACCGCGGGGGCGGCGGCGGCGGTGGAGGTGGCTACAGGGAA
AATCAGGAACAAACAAATAATGGCTTCGGTGGTCAGTCAGCACAGCAAAA
CTGGCCTACTCCCGGCGGAGCCAGTGCGGGGGGTGGGGATGGGAATGCCG
GGGATAGGGGGGCTGGGGAGGGGGGTGGGAATGGGAGTGAGCGCTGGCAA
AAGCACGCGCAGATAATGAGTGGGAAGAGTGGCGGGGGCGGCGGAGGTGG
CGGTGGTGGTGGCTATCATTCCCAGCGGCACGGCAAACAAAACCAGAGGT
GACTCCGCTGATTGTTGTTTGGCACTTCAACCAAATATTGGAGAATAGTT
CCTCAATACTCCTGATGCTTTTAAAGTCTTGTGTATCATACTTATTTGCC
AGCACTTTGGACTCGTCGCAGGCCCGAGGTTAGCGGTGAGAGGGAGCAGG
GGCGAGTGTGCTCCCTCAAGGATTCATTTGGCTTCGTCCGCTGCATGGAT
AGGGCCGGTGACCTGTTTTTCCACCTGACCGAGGCACCCCCGAACATTAA
CGTCGGAGACGAAGTAGACTTCTTCGTCGGCATGGGCAGCAGGTGAGATG
CCCTGATTCAAGTCTCTCCACTCCTTGTTCTGACTCATCTTCAGGACTGA
TGATTTTTTTCGTAGATTGGTTGATTTTTCAACACGCCTTTATTTTACAG
AGTGTACCTGTACCGTTTCAGAGCTTGCCGTGCGGAACGGATTTTATTGT
ACATGATAACTCGTGTGTTCGCTGAATTGTGTCCGTTTGTGTGCTTCCAC
TCACTATTTTTGAATTTTTCCAGGGGCGGGAAGGACTGCGCTTTGAAGCT
GAACCTTCTTCCCCCTGGAACAGTGACTTCAGAAGTTGTCCTCGACGGTG
AGCATCTGGTGTAGCTTTTTGCGATGCGGTTATTCAGGGGTGTAGTTTCC
CGAAACAGGCAGAACTCCGAGCTTCAGTTCCACGACTACTTGGATTTATT
TTCGTTTGATTAGTGGGCCTTATTTGTGTCTTTATTTCATGAAAACTTGT
TTTTGGAGGTCGGCGAGATCATCTCGTCGCTTTGCGTTACACTCTTTGTA
TTAGCGTCTCGAAGAGACGTCGCCGTCGACTGCTTGTCGTTTTGCGTGCG
CGGCGCGGTTGTTGGGTGTGTGCTCAATCAAGTCTGGCGATAGAGCGGTA
AGGTGTGTGCTTCTGGTTTATCCTTCCCTGGGGAAGTTGAGATTTCATTT
GCATCTCCCCTAGCTAAAAGCACAACAACGACGAACGACCACAGTCATAG
ACAAGTACTGATACATGGTGGGCGTCCTTCTACTTGCTCCGCTATTTTCT
TCATTTACGTCCAGCATCGTTCCTGGGGGTTGTTGAGAGGGACATACGCG
CGTACCCCTCCTCCATGCCGAGTACTCACCGAGCGAACATGATGGGGCGA
TCCAGACCGCATGAATCCCAGCAGGCCGAGGGGCTCATCAAGGCAAGAAA
TTGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig79:136..5289-

>mRNA_P-littoralis_Contig79.1.2 ID=mRNA_P-littoralis_Contig79.1.2|Name=mRNA_P-littoralis_Contig79.1.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1035bp|location=Sequence derived from alignment at P-littoralis_Contig79:136..5289- (Pylaiella littoralis U1_48)
ATGGACAGGCGACATAACGGGGGTGGTGGCGATTATGGTCATGATGGCGG
AGGACCAGGAAGAGTAGGCGGCAATCGTTCCTCCTTCGAACGGAGACCAA
ACCAGGACGGCCAGGAGGACGGCGGTGGTGGAGGTGGTGGTGGTGGAGAT
GGAGGCCGGTGGCAAAACGACATGTACGACAGCAACGCCCAACAGCCTCG
GAGAAGCCACGGTGGTGGCGGAGATGACTATCGGGAAAGAGGCGGCTACC
AGCACGACCAGCGTGATCAAAGGGGAGACGGAGGAAGGAGAAGGTCGCGC
GGTTACGGCGGTGGGGGGAGGGAAGGGGGCTTTGGCGGCGGCGGTGGAAG
ACGCGACAACCACCGCGGGGGCGGCGGCGGCGGTGGAGGTGGCTACAGGG
AAAATCAGGAACAAACAAATAATGGCTTCGGTGGTCAGTCAGCACAGCAA
AACTGGCCTACTCCCGGCGGAGCCAGTGCGGGGGGTGGGGATGGGAATGC
CGGGGATAGGGGGGCTGGGGAGGGGGGTGGGAATGGGAGTGAGCGCTGGC
AAAAGCACGCGCAGATAATGAGTGGGAAGAGTGGCGGGGGCGGCGGAGGT
GGCGGTGGTGGTGGCTATCATTCCCAGCGGCACGGCAAACAAAACCAGAG
GCCCGAGGTTAGCGGTGAGAGGGAGCAGGGGCGAGTGTGCTCCCTCAAGG
ATTCATTTGGCTTCGTCCGCTGCATGGATAGGGCCGGTGACCTGTTTTTC
CACCTGACCGAGGCACCCCCGAACATTAACGTCGGAGACGAAGTAGACTT
CTTCGTCGGCATGGGCAGCAGGGGCGGGAAGGACTGCGCTTTGAAGCTGA
ACCTTCTTCCCCCTGGAACAGTGACTTCAGAAGTTGTCCTCGACGCATCG
TTCCTGGGGGTTGTTGAGAGGGACATACGCGCGTACCCCTCCTCCATGCC
GAGTACTCACCGAGCGAACATGATGGGGCGATCCAGACCGCATGAATCCC
AGCAGGCCGAGGGGCTCATCAAGGCAAGAAATTGA
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