mRNA_P-littoralis_Contig789.25.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig789.25.1 vs. uniprot
Match: A0A6H5JET4_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET4_9PHAE) HSP 1 Score: 479 bits (1234), Expect = 1.570e-155 Identity = 261/458 (56.99%), Postives = 303/458 (66.16%), Query Frame = 1
Query: 16 VDVMGDLPAAELEEFQFLKVAGLVVKLDAFHAMQRLSKLILKSHGACGAYLARLRDAFFTINAEDLAAVEAALLQAGMSQDEVDIKKTKDWAYFLKRCRRMLPPPAELVKRFDLVNKIYGGLVGKKTKKPLFRAEALEAVKRLRVHIVEDCCSDAPDQALHFEAGKDSE-LYDLSLCSRH*A-LEGYHLHMRLLVAWCLSPRLAHLLLLEHNYRWNLRQSINNRGLGEAVGGFYYQPMLEAIERVTSKLYGNAKYPDWLPTSAYADTGERCGFVRSIFASNGGGGGIAPMEEILGGEDNCGLEPPSGGE-VPCPCI--------------------------------------------------------------------------------------------VRDTMRPVRLQEGPVRNHLRLPDDVGGAATAVAQPWVLQPPDGFEFPTQL 1104
+DV D +AE+EE FLKVAGLVVKLD FHAMQR+SKLILKSHGAC AYLARLRDAFF +NAEDLAAVEAAL QAGMS++EV+ KK KDW YFLKRCRR++P PAEL++RFDLVN +YGGL+ KKTK+PLFRAEALEA+KRLRVHI+ DCCSD+P++AL+FEAGKD+E L L C R LEGYHLHMRLLVAWC+SPRLAHLLLLE+NYRWNLRQS+ NRGL EAVGGFY QPMLEAI+R+TSKLYG AKY WLPTSAY DTGER GFVRSIF SN GGG + EILGG +N G++P E VP P + +RDT+RP R ++ P+R HLR P DVGG A +AQPW+L+ P+GF+ P QL
Sbjct: 680 LDVTADTSSAEVEELLFLKVAGLVVKLDTFHAMQRVSKLILKSHGACRAYLARLRDAFFKVNAEDLAAVEAALRQAGMSKEEVEAKKAKDWVYFLKRCRRLIPRPAELLERFDLVNNLYGGLIDKKTKQPLFRAEALEAIKRLRVHIMNDCCSDSPNEALYFEAGKDAETLCPLFRCIRGTNDLEGYHLHMRLLVAWCISPRLAHLLLLEYNYRWNLRQSMKNRGLDEAVGGFYDQPMLEAIQRMTSKLYGKAKYSQWLPTSAYGDTGERSGFVRSIFPSNVVGGGTDSVLEILGGAENSGIDPAFADEAVPLPELTGSAARLAKMQGVQVPHMPVTSAAEKAKFGDMWLEFVDPAGRQTLLDFDSFALEWNKAVSLMEEGKSAVIPIFRKTAGHLKAYWKAHHEQVNMRDTLRPARGRDAPIREHLRAPGDVGGPAGGLAQPWILEAPEGFQMPEQL 1137
BLAST of mRNA_P-littoralis_Contig789.25.1 vs. uniprot
Match: A0A6H5KEU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEU8_9PHAE) HSP 1 Score: 417 bits (1072), Expect = 4.360e-138 Identity = 220/330 (66.67%), Postives = 259/330 (78.48%), Query Frame = 1
Query: 13 IVDVMGDLPAAELEEFQFLKVAGLVVKLDAFH--AMQRLSKLILKSHGACGAYLARLRDAFFTINAEDLAAVEAALLQAGMSQDEVDIKKTKDWAYFLKRCRRMLPPPAELVKRFDLVNKIYGGLVGKKTKKPLFRAEALEAVKRLRVHIVEDCCSDAPDQALHFEAGKDSE-LYDLSLCSRH*A-LEGYHLHMRLLVAWCLSPRLAHLLLLEHNYRWNLRQSINNRGLGEAVGGFYYQPMLEAIERVTSKLYGNAKYPDWLPTSAYADTGERCGFVRSIFASNGGGGGIAPMEEILGGEDNCGLEPPSGGE-VPCPCIVRDTMRPVRLQ 987
++DV D+ +AE+EE FLK+ L + A A +SKLILKSHGAC AYLARLRD FF +NAEDLAAVEAAL QAGMS++EV+ KK KDW FLKRCRR++P PAEL+KRFD+VN +YGGL+ KKTK+PLFRAEALEA+KRLRVHI+ DCCSDAP++AL+FEAGKD+E L L C R LEG+HLHMRLLVAWC+SPRLAHLLLLE+NYRWNLRQS+ NRGL EAVGGFY QP+LEAI+R+TSKLYG AKY WLPTSAY DTGER GFVRSIF S GGGG + EILGG +N ++P S E VP P + R ++Q
Sbjct: 279 LLDVTADMSSAEVEELLFLKLKALDQRNYALLRLAAGEVSKLILKSHGACRAYLARLRDEFFKVNAEDLAAVEAALRQAGMSKEEVEAKKGKDWVLFLKRCRRLIPRPAELLKRFDVVNNLYGGLLDKKTKQPLFRAEALEAIKRLRVHIMNDCCSDAPNEALYFEAGKDAETLCPLFRCIRGTNDLEGFHLHMRLLVAWCISPRLAHLLLLEYNYRWNLRQSMKNRGLDEAVGGFYDQPILEAIQRMTSKLYGKAKYSQWLPTSAYGDTGERSGFVRSIFPSEVGGGGTDSVLEILGGAENSSMDPASVEEAVPLPELTGSAARLAKMQ 608
BLAST of mRNA_P-littoralis_Contig789.25.1 vs. uniprot
Match: A0A6H5JD89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD89_9PHAE) HSP 1 Score: 307 bits (786), Expect = 1.130e-96 Identity = 157/228 (68.86%), Postives = 183/228 (80.26%), Query Frame = 1
Query: 313 RMLPPPAELVKRFDLVNKIYGGLVGKKTKKPLFRAEALEAVKRLRVHIVEDCCSDAPDQALHFEAGKDSE-LYDLSLCSRH*A-LEGYHLHMRLLVAWCLSPRLAHLLLLEHNYRWNLRQSINNRGLGEAVGGFYYQPMLEAIERVTSKLYGNAKYPDWLPTSAYADTGERCGFVRSIFASNGGGGGIAPMEEILGGEDNCGLEPPSGGE-VPCPCIVRDTMRPVRLQ 987
R++P PAEL++RFDLVN +YGGL+ KKTK+PLFRAEALEA+KRLRVHI+ DCCSD+P++AL+FEAGKD+E L L C R LEGYHLHMRLLVAWC+SPRLAHLLLLE+NYRWNLRQS+ NRGL EAVGGFY QPMLEAI+R+TSKLYG AKY WLPTSAY DTGER GFVRSIF SN GGG + EILGG +N G++P E VP P + R ++Q
Sbjct: 206 RLIPRPAELLERFDLVNNLYGGLIDKKTKQPLFRAEALEAIKRLRVHIMNDCCSDSPNEALYFEAGKDAETLCPLFRCIRGTNDLEGYHLHMRLLVAWCISPRLAHLLLLEYNYRWNLRQSMKNRGLDEAVGGFYDQPMLEAIQRMTSKLYGKAKYSQWLPTSAYGDTGERSGFVRSIFPSNVVGGGTDSVLEILGGAENSGIDPAFADEAVPLPELTGSAARLAKMQ 433
BLAST of mRNA_P-littoralis_Contig789.25.1 vs. uniprot
Match: A0A1Y2A9B5_9FUNG (3'-5' exonuclease domain-containing protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2A9B5_9FUNG) HSP 1 Score: 212 bits (540), Expect = 1.550e-58 Identity = 114/236 (48.31%), Postives = 152/236 (64.41%), Query Frame = 1
Query: 82 LVVKLDAFHAMQRLSKLILKSHGACGAYLARLRDAFFTINAEDLAAVEAALLQAGMSQDEVDIKKTKDWAYFLKRCRRMLPPPAELVKRFDLVNKIYGGLVGKKTKKPLFRAEALEAVKRLRVHIVEDCCSDAPDQALHFEAGKDSELYDLSLCSRH*-ALEGYHLHMR-LLVAWCLSPRLAHLLLLEHNYRWNLRQSINNRGLGEAVGGFYYQPMLEAIERVTSKLYGNAKYPDW 783
L V+LD FHAM R++K +LKSHGA ++ARLRDAFF I+ +DL V AAL AG+S DE++ KK DWA+FLK C R++P EL+KR+D V + ++ KT +PLFR+ + V+ LR HI C SD PD L+F G+ S+ + C+R + EGYH HMR LL + SP L HLLLLE N+RWN+R ++ NRGL GGFY Q +L+ I R +S L + Y W
Sbjct: 433 LKVRLDCFHAMNRINKTLLKSHGAYKPFMARLRDAFFLISKDDLDLVVAALKTAGLSDDEIEAKKDYDWAFFLKYCHRLIPCKEELLKRYDFVCNTFQDILDSKTNEPLFRSNTKKEVRNLRKHIQNGCLSDVPDIPLYFLEGRTSQGLPIYRCARGTNSNEGYHRHMRKLLHHYASSPMLLHLLLLEFNFRWNIRMAVKNRGLPSEYGGFYSQSLLDEINRNSSGLSVHVPYLAW 668
BLAST of mRNA_P-littoralis_Contig789.25.1 vs. uniprot
Match: A0A6H5JPK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPK9_9PHAE) HSP 1 Score: 195 bits (496), Expect = 1.320e-53 Identity = 113/268 (42.16%), Postives = 164/268 (61.19%), Query Frame = 1
Query: 76 AGLVVKLDAFHAMQRLSKLILKSHGACGAYLARLRDAFFTINAEDL---AAVEAALLQAGMSQDEVDIKKTKDWAYFLKRCRRMLPPPAELVKRFDLVNKIYGGLVGKKTKKPLFRAEALEAVKRLRVHIVEDCCSDAPDQALHFEAGKDSELYDLSLCSRH*-ALEGYHLHMR-LLVAWCLSPRLAHLLLLEHNYRWNLRQSINNRGLGEAVGGFYYQPMLEAIERVTSKLYGNAK-YPDWLPTSAYADTGERCGFVRSIFASNGGG 861
+ L V+LD FHA+QR+SKL KSHGA ++ARLRDA F +N +D+ +AVE AL GM+ + V K K+W +F++ CRR++P L++RF+LV + + +V K+ + L R A +AV+ LR HI C SD L++ +GK+S C R EGYH ++R LL +C SP LAH +LLE NYRWN+R ++ NRGL VG F+ Q +E I+R T+ Y ++ +P+W+ ADTGE+ G S++ GG
Sbjct: 174 SALKVRLDIFHALQRVSKLCKKSHGAFKPFMARLRDACFIVNLDDIKEASAVEQALAGKGMTPEAVVEYKDKNWTFFVRNCRRLVPEQKRLLERFNLVIRQFQDVVDAKSGETLLRPCARQAVELLRKHIESGCLSDPERVPLYYTSGKNSAGITTRRCVRGTNCTEGYHRYVRRLLSTYCASPSLAHSVLLEFNYRWNVRMAVKNRGLPREVGEFFDQFEIEIIQRETASWYPDSPLFPEWVSALDAADTGEQSGLSESLWGPASGG 441
BLAST of mRNA_P-littoralis_Contig789.25.1 vs. uniprot
Match: A0A6H5KLP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLP1_9PHAE) HSP 1 Score: 186 bits (473), Expect = 5.580e-49 Identity = 109/267 (40.82%), Postives = 160/267 (59.93%), Query Frame = 1
Query: 76 AGLVVKLDAFHAMQRLSKLILKSHGACGAYLARLRDAFFTINAEDL---AAVEAALLQAGMSQDEVDIKKTKDWAYFLKRCRRMLPPPAELVKRFDLVNKIYGGLVGKKTKKPLFRAEALEAVKRLRVHIVEDCCSDAPDQALHFEAGKDSELYDLSLCSRH*ALEGYHLHMR-LLVAWCLSPRLAHLLLLEHNYRWNLRQSINNRGLGEAVGGFYYQPMLEAIERVTSKLYGNAK-YPDWLPTSAYADTGERCGFVRSIFASNGGG 861
+ L V+LD FHA+QR+SKL KSHGA ++ARLRDA F +N +D+ +AVE AL GM+ + V K K+W +F++ CRR++P L++RF+LV + + +V K+ + L R A +AV+ LR HI C SD L++ K + + EGYH ++R LL +C SP LAH +LLE NYRWN+R ++ NRGL VG F+ Q +E I+R T+ Y ++ +P+W+ ADTGE+ G S++ GG
Sbjct: 174 SALKVRLDIFHALQRVSKLCKKSHGAFRPFMARLRDACFIVNLDDIKEASAVEQALAGKGMTPEAVVEYKDKNWTFFVRNCRRLVPEQKRLLERFNLVIRQFQDVVDAKSGETLLRPCARQAVELLRKHIESGCLSDPERVPLYYT--KSAGITTRRCVRGTNCTEGYHRYLRRLLSTYCASPSLAHSVLLEFNYRWNVRMAVKNRGLPREVGEFFDQFEIEIIQRETASWYPDSPLFPEWVSALDAADTGEQSGLSESLWGPASGG 438
BLAST of mRNA_P-littoralis_Contig789.25.1 vs. uniprot
Match: D7G3Q9_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q9_ECTSI) HSP 1 Score: 186 bits (471), Expect = 2.100e-48 Identity = 99/222 (44.59%), Postives = 143/222 (64.41%), Query Frame = 1
Query: 88 VKLDAFHAMQRLSKLILKSHGACGAYLARLRDAFFTINAEDLAAVEAALLQAGMSQDEVDIKKTKDWAYFLKRCRRMLPPPAELVKRFDLVNKIYGGLVGKKTKKPLFRAEALEAVKRLRVHIVEDCCSDAPDQALHFEAGKDSELYDLSLCSRH*A-LEGYHLHMR-LLVAWCLSPRLAHLLLLEHNYRWNLRQSINNRGLGEAVGGFYYQPMLEAIERVT 747
V+LD FHA+ RLS+ I K HGA +ARLRDA F +N +D+ +E L + GMS +V K +DW+YFL++CRR++PPP+EL+KRFD V + +G V +K+ L R ++++AV LR HIV C SD A+++ GK ++ C R +EGYH ++R LL ++C SP LA +LLE N+RWNL+ + NRGL +G Y Q ++E I+R T
Sbjct: 545 VRLDLFHALNRLSRTIKKGHGAFRPIMARLRDACFLVNRDDVLQIEKVLERRGMSPAQVQQAKDQDWSYFLRKCRRLVPPPSELLKRFDKVVQEFGNCVDNISKEVLLRPKSMKAVSLLRKHIVAGCLSDPDGVAMYYAVGKTTDGLVNYRCVRGTNDVEGYHRYLRTLLASYCASPALAQSVLLEFNFRWNLKMMVKNRGLPAELGEHYNQHLVEIIQRAT 766
BLAST of mRNA_P-littoralis_Contig789.25.1 vs. uniprot
Match: A0A6H5JRJ6_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ6_9PHAE) HSP 1 Score: 185 bits (470), Expect = 6.990e-48 Identity = 113/289 (39.10%), Postives = 163/289 (56.40%), Query Frame = 1
Query: 88 VKLDAFHAMQRLSKLILKSHGACGAYLARLRDAFFTINAEDL-------------AAVEAALLQAGMSQDEVDIKKTKDWAYFLKRCRRMLPPPAELVKRFDLVNKIYGGLVGKKTKKPLFRAEALEAVKRLRVHIVEDCCSDAPDQALHFEAGKDSE-LYDLSLCSRH*ALEGYHLHMR-LLVAWCLSPRLAHLLLLEHNYRWNLRQSINNRGLGEAVGGFYYQPMLEAIERVTSKL-YGNAKYPDWLPTSAYADTGERCGFVRSIFASNGGGGGIAPMEEILGGEDN 906
V+LD FH + R+S++ KSHGA ++ARLRDA F +N +D+ +VE L GM +EV ++W++FL+ RR++P L+KRFD V + +GG V + + L R +A++AV++LR HI DC SD A++F GK+ L D +EGYH ++R LL ++C SP LA +LLE NYRWNLR I NRGL A+GG Y Q ++E+I+R T+ + +P+W DTGER G RS++ G E+ G DN
Sbjct: 488 VRLDPFHTLNRISRMTKKSHGAFKPFMARLRDACFLVNRDDVYQASLKPFGWIWERSVEMTLEARGMKPEEVQQLTEQNWSFFLRSSRRLVPRRDVLLKRFDRVIEEFGGCVDNTSGEVLLRPKAMKAVRQLRKHIENDCLSDPDGMAMYFAIGKNKHGLTDYRCVRGTNDVEGYHRYLRTLLASYCASPSLAQSVLLEFNYRWNLRMMIKNRGLPAALGGHYNQYLVESIQRDTADWDSSHPVFPEWPAAIDSVDTGERFGLERSLWGGERDG-------EVWGIADN 769
BLAST of mRNA_P-littoralis_Contig789.25.1 vs. uniprot
Match: D7FIV1_ECTSI (Similar to Werner syndrome protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV1_ECTSI) HSP 1 Score: 166 bits (420), Expect = 1.090e-41 Identity = 97/255 (38.04%), Postives = 140/255 (54.90%), Query Frame = 1
Query: 79 GLVVKLDAFHAMQRLSKLILKSHGACGAYLARLRDAFFTINAEDLAAVEAALLQAGMSQDEVDIKKTKDWAYFLKRCRRMLPPPAELVKRFDLVNKIYGGLVGKKTKKPLFRAEALEAVKRLRVHIVEDCCSDAPDQALHFEAGKDSELYDLSLCSRH*ALEGYHLHMRLLVAWCLSPRLAHLLLLEHNYRWNLRQSINNRGLGEAVGGFYYQPMLEAIERVTSKLY-GNAKYPDWLPTSAYADTGERCGFVRSI 840
L V+LD FHA+QR+S+L KSHGA ++ARLRDA F +N +D+ VE AL GM+ + V K K+W YFL+ CRR++P L++RF+ V + +V K+ + L R +A++AV +LR HI DC SD L++ G+++ C R Y E NYRWN+R ++ NRGL VG F+ Q +E I+R TS Y N +P+W+ ADTGE+ G +S+
Sbjct: 497 ALQVRLDIFHALQRISRLCKKSHGAFKPFMARLRDACFIVNQDDIKEVEQALGSKGMTPEAVAEYKDKNWTYFLRNCRRLVPERQRLLERFNSVINQFCNVVDAKSGEVLIRPKAMQAVDQLRKHIESDCLSDPHGVPLYYTTGQNAAGITTRRCVRG---TNYT---------------------EFNYRWNIRMAVKNRGLPREVGEFFDQFEIEIIQRETSSWYPDNPLFPEWISALDAADTGEKSGLSQSL 727
BLAST of mRNA_P-littoralis_Contig789.25.1 vs. uniprot
Match: A0A6H5K4M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4M0_9PHAE) HSP 1 Score: 117 bits (294), Expect = 8.640e-25 Identity = 79/231 (34.20%), Postives = 115/231 (49.78%), Query Frame = 1
Query: 220 VEAALLQAGMSQDEVDIKKTKDWAYFLKRCRRMLPPPAELVKRFDLVNKIYGGLVGKKTKKPLFRAEALEAVKRLRVHIVEDCCSDAPDQALHFEAGKDSELYDLSLCSRH*A-LEGYHLHMRLLVAWCLSPRLAHLLLLEHNYRWNLRQSINNRGLGEAVGGFYYQPMLEAIERVTSKLYGNAKYPDWLPTSAYADTGERCGFVRSIFASNGGGGGIAPMEEILGGEDNC 909
VE L GM+ + + K +W++FLKRCRR++PPP+EL+K FD V + +G V +K+ L R ++++AV+ LR HIV C SD A+++ GK ++ C R +EGYHL ++ SP LA +LLE N+RWNL+ + NR + P +P W DTGER G RS++ GG A G E +C
Sbjct: 837 VEKVLECRGMTPAQAEQVKDHNWSFFLKRCRRLVPPPSELLKPFDKVVEEFGNCVDNVSKEALLRPKSMKAVRLLRKHIVAGCLSDPDGVAMYYAIGKTTDGLVRYRCVRGTNDVEGYHL-----ASYSASPALAQSVLLEFNFRWNLKMMVKNRD---------WDPSFPV-------------FPQWQAAVDSVDTGERSGLGRSLW-----GGENAKAWNGAGHEASC 1035 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig789.25.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig789.25.1 >prot_P-littoralis_Contig789.25.1 ID=prot_P-littoralis_Contig789.25.1|Name=mRNA_P-littoralis_Contig789.25.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=212bp MRLLVAWCLSPRLAHLLLLEHNYRWNLRQSINNRGLGEAVGGFYYQPMLEback to top mRNA from alignment at P-littoralis_Contig789:91609..93781- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig789.25.1 ID=mRNA_P-littoralis_Contig789.25.1|Name=mRNA_P-littoralis_Contig789.25.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2173bp|location=Sequence derived from alignment at P-littoralis_Contig789:91609..93781- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig789:91609..93781- >mRNA_P-littoralis_Contig789.25.1 ID=mRNA_P-littoralis_Contig789.25.1|Name=mRNA_P-littoralis_Contig789.25.1|organism=Pylaiella littoralis U1_48|type=CDS|length=636bp|location=Sequence derived from alignment at P-littoralis_Contig789:91609..93781- (Pylaiella littoralis U1_48)back to top |