mRNA_P-littoralis_Contig789.15.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig789.15.1 vs. uniprot
Match: A0A6H5L7W4_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7W4_9PHAE) HSP 1 Score: 150 bits (378), Expect = 4.140e-37 Identity = 113/297 (38.05%), Postives = 159/297 (53.54%), Query Frame = 3
Query: 6 FVHEGRRIPTVFEEGSVLLFDTNPTPKKAEE---GDGRAAQKLGKFKKGDKVTQDGKAWKCLGLARGAKELLQDCGLYKLPGERKAPKLACKRCTAEAKALAEQKKQ-EKRGHHRW*LVVGKGVRIRNLIGKGRVILDAVASGSYSAICRHSRNRRIAWR-RCSRQPDIGVSSSQSITRSATPSSES-------GGTLRPSNAGCAINPSRVFLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTSHRSSTDRVDAVLMAKSTAASPEERKKNEETALAASR 860
F + GR I T F EG VL F ++P +K E R ++LG F G V + + K +G+A+G KE+L+D GLYKL E KAP L C+RC EAKA ++ K G R + G+G + A S C+ + A++ + +R ++ ++ + A E G T C + + L RLP TLS++SLSL RKWAR+SWLY+ AY+ GL+GY+Q RDLKKWT+HRS TD D VL+A+ A + EERK E+ ALAA++
Sbjct: 837 FEYNGRTIYTTFREGDVLCFRSSPFARKTEAEAVAKKRHGKRLGVFPIGTVVKRGTSSEKLIGVAKGMKEILEDMGLYKLASETKAPPLLCQRCKDEAKAKRDKSTMYNKGGESRQQALEGEGDSDDSDXXSEEGGARDAARTSRRCCCQRIISEVKAFKEQMNRVEELFEAAGHACIFLAKYHPELNAIERFWGYTKSIERRVCDYSVLSL-LARLPMTLSTVSLSLCRKWARVSWLYIYAYSHGLEGYLQTRDLKKWTNHRSPTDTADNVLLARGQATTAEERKAKEQAALAAAK 1132
BLAST of mRNA_P-littoralis_Contig789.15.1 vs. uniprot
Match: A0A6H5K2M3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M3_9PHAE) HSP 1 Score: 144 bits (362), Expect = 3.740e-35 Identity = 111/294 (37.76%), Postives = 156/294 (53.06%), Query Frame = 3
Query: 6 FVHEGRRIPTVFEEGSVLLFDTNPTPKKAEEGDGRAAQKLGKFKKGDKVTQDGKAWKCLGLARGAKELLQDCGLYKLPGERKAPKLACKRCTAEAKALAEQKKQ-EKRGHHRW*LVVGKGVRIRNLIGKGRVILDAVASGSYSAICRHSRNRRIAWR-RCSRQPDIGVSSSQSITRSATPSSESGGTLRPSNAGCAINPSRV-------FLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTSHRSSTDRVDAVLMAKSTAASPEERKKNEETALAASR 860
F + GR I T F EG VL F ++P +K E A+ +G V + + K +G+A+G KE+L+D GLYKL E KAP L C+RC EAKA ++ K G R + G+G + A S C+ + A++ + +R ++ ++ + A E R +I RV L RLP TLS++SLSL RKWAR+SWLY+ AY+ GL+GY+Q RDLKKWT+HRS TD D VL+A+ A + EERK E+ ALAA++
Sbjct: 403 FEYNGRTIYTTFREGDVLCFRSSPFARKTE------AEAVGTV-----VKRGTSSEKLIGVAKGMKEILEDMGLYKLASETKAPPLLCQRCKDEAKAKRDKSTMYNKGGESRQQALEGEGDSDDSDXXSEEGGARDAARTSRRCCCQRIISEVKAFKEQMNRVEELFEAAGHACIFLAKYHPELNAIQRFWGYTKSIER-RVCDYSVLSLLARLPMTLSTVSLSLCRKWARVSWLYIYAYSHGLEGYLQTRDLKKWTNHRSPTDTADNVLLARGQATTAEERKAKEQAALAAAK 684
BLAST of mRNA_P-littoralis_Contig789.15.1 vs. uniprot
Match: A0A6H5K7K1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7K1_9PHAE) HSP 1 Score: 117 bits (294), Expect = 1.920e-26 Identity = 58/106 (54.72%), Postives = 70/106 (66.04%), Query Frame = 2
Query: 317 GEARASSLVASGGEGGEDTEPDRQGESD----TRRCCLRFVLSNLPAFKEQKNRVEEMFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRVCD*SVKSFLKTTP 622
GE+R +L G D + G D +RRCC + ++S + AFKEQ NRVEE+FEAAGH CIFL KYHPE NAIER WG++K+IERRVCD SV S L P
Sbjct: 307 GESRQQALEGEGDSDDSDXXSEEGGARDAARTSRRCCCQRIISEVKAFKEQMNRVEELFEAAGHACIFLAKYHPELNAIERFWGYTKSIERRVCDYSVLSLLARLP 412
BLAST of mRNA_P-littoralis_Contig789.15.1 vs. uniprot
Match: A0A6H5K344_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K344_9PHAE) HSP 1 Score: 117 bits (294), Expect = 2.460e-26 Identity = 58/106 (54.72%), Postives = 70/106 (66.04%), Query Frame = 2
Query: 317 GEARASSLVASGGEGGEDTEPDRQGESD----TRRCCLRFVLSNLPAFKEQKNRVEEMFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRVCD*SVKSFLKTTP 622
GE+R +L G D + G D +RRCC + ++S + AFKEQ NRVEE+FEAAGH CIFL KYHPE NAIER WG++K+IERRVCD SV S L P
Sbjct: 383 GESRQQALEGEGDSDDSDXXSEEGGARDAARTSRRCCCQRIISEVKAFKEQMNRVEELFEAAGHACIFLAKYHPELNAIERFWGYTKSIERRVCDYSVLSLLARLP 488
BLAST of mRNA_P-littoralis_Contig789.15.1 vs. uniprot
Match: A0A6H5KGB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGB3_9PHAE) HSP 1 Score: 115 bits (287), Expect = 1.580e-25 Identity = 50/76 (65.79%), Postives = 61/76 (80.26%), Query Frame = 2
Query: 392 ESDTRRCCLRFVLSNLPAFKEQKNRVEEMFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRVCD*SVKSFLKTT 619
+ +RRCC R ++S + AF+EQ NRVEE+FEAAGH CIFL KYHPE NAIER WG++KAIERRVCD SV+S +T
Sbjct: 389 DGTSRRCCCRRIISEVKAFQEQMNRVEELFEAAGHVCIFLAKYHPELNAIERFWGYTKAIERRVCDYSVQSLXSST 464
BLAST of mRNA_P-littoralis_Contig789.15.1 vs. uniprot
Match: A0A6H5K8V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8V9_9PHAE) HSP 1 Score: 108 bits (270), Expect = 1.750e-23 Identity = 53/85 (62.35%), Postives = 67/85 (78.82%), Query Frame = 3
Query: 606 FLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTSHRSSTDRVDAVLMAKSTAASPEERKKNEETALAASR 860
L RLP TLS++SLSL RKWAR+SWLY+ AY+ GL+GY+Q RDLKKWT+HRS TD D VL+A+ A + EERK E+ ALAA++
Sbjct: 277 LLARLPMTLSTVSLSLCRKWARVSWLYIYAYSHGLEGYLQTRDLKKWTNHRSPTDTADNVLLARGQATTAEERKAKEQAALAAAK 361
BLAST of mRNA_P-littoralis_Contig789.15.1 vs. uniprot
Match: A0A6H5JT56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT56_9PHAE) HSP 1 Score: 107 bits (266), Expect = 1.760e-22 Identity = 101/322 (31.37%), Postives = 149/322 (46.27%), Query Frame = 3
Query: 15 EGRRIPTVFEEGSVLLFDTN----PTPKKAEEGDGRAAQK------------LGKFKKGDKVTQDGKAWKCLGLARGAKELLQDCGLYKLPGERKAPKLACKRCTAEAKALAEQKKQEKRGHHRW*LVVGKGVRIRNLIGKGRVILDAVASGSYSAICRH--SRNRRIAWRR--CSRQPDIGVSSSQSITRSATPSSESGGTL-------RPS-NA-----GCAINPSRV--------FLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTSHRSSTDRVDAVLMAKSTAA-SPEERKKNEETALAA 854
+G + F EG +LFDT+ TP++ EE + AA+K LG F G+KV G+ +G A+G ++LL + GL+ +PG+ L CK C E KA+ RG R + L R D G+ + R+ RR C R+ + + + + G + P NA G A + R+ L+ LP LS + L +R W+R++WLY+EAY GL Y++ RDLKKW SHRS T+R D+V++A++ A + EE+KK EE ALAA
Sbjct: 168 QGNLVHATFREGDTVLFDTHVYAAKTPEQLEEEEREAAKKDPKYKRPKIGSSLGDFNAGEKVRTTGRTSGLIGQAKGGQQLLMEMGLWDVPGQAPIRVLECKACKEERKAIKAAITAFNRGGE---------ARQQALDDAAREDQDGGGDGASPEEGTEGGAAGNRVGMRRRCCIRKVFAELKAFKMELNKIEKMFKKAGHICIFLAKYHPELNAIERYWGYAKHILRLSCEYSLPHMLEILPGALSGVPLGFVRGWSRVTWLYLEAYDEGLVDYLEVRDLKKWLSHRSPTERGDSVVLARAGAGKTEEEKKKAEEKALAA 480
BLAST of mRNA_P-littoralis_Contig789.15.1 vs. uniprot
Match: A0A6H5K659_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K659_9PHAE) HSP 1 Score: 107 bits (267), Expect = 2.030e-22 Identity = 96/315 (30.48%), Postives = 142/315 (45.08%), Query Frame = 3
Query: 15 EGRRIPTVFEEGSVLLFDTN----PTPKKAEEGDGRAAQK------------LGKFKKGDKVTQDGKAWKCLGLARGAKELLQDCGLYKLPGERKAPKLACKRCTAEAKALAEQKKQEKRGHHRW*LVVGKGVRIRNLIGKGRVILDAVASGSYSAICRHSRNRRIAWRRCSRQPDIGVSSSQSITRSATPSSES------------------GGTLRPSNAGCAINPSRVFLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTSHRSSTDRVDAVLMAKSTAA-SPEERKKNEETALAA 854
+G + F EG +LFDT+ TP++ EE + AA+K LG FK G+KV G+ +G A+G ++LL + GL+ +PG+ L CK C E KA+ RG + R + G G + +A R RR R+ + I + + G C + + L+ LP LS + L +R W+R++WLY+EAY GL Y++ RDLKKW SHRS T+R D+V++A++ A + EE+KK EE ALAA
Sbjct: 601 QGNLVHATFREGDTVLFDTHVYAAKTPEQLEEEEREAAKKDPKYKRPKFGSSLGDFKAGEKVRTTGRTSGLIGQAKGGQQLLMEMGLWDVPGQAPIRVLECKACKEERKAIKAAITAFNRGGEARQQALDDAAR-EDQDGGGDGASPEEGTEGGAAGNRVGMRRRCCIRKVFAELKAFKMELNKIEKMFKKAGHICIFLAKYHPELNAIERYWGYVKHLLRLSCEYSLPHM-LEILPGALSGVPLGFVRGWSRVTWLYLEAYDEGLVDYLEVRDLKKWLSHRSPTERGDSVVLARAGAGKTEEEKKKAEEKALAA 913
BLAST of mRNA_P-littoralis_Contig789.15.1 vs. uniprot
Match: A0A6H5KDG4_9PHAE (Uncharacterized protein n=6 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDG4_9PHAE) HSP 1 Score: 105 bits (262), Expect = 1.010e-21 Identity = 100/320 (31.25%), Postives = 149/320 (46.56%), Query Frame = 3
Query: 18 GRRIPTVFEEGSVLLFDTN----PTPKKAEEGDGRAAQK------------LGKFKKGDKVTQDGKAWKCLGLARGAKELLQDCGLYKLPGERKAPKLACKRCTAEAKALAEQKKQEKR-GHHRW*LVVGKGVRIRNLIGKGRVILDAVASGSYSAICRHSRNRRIAWRR--CSRQPDIGVSSSQSITRSATPSSESGGTL-------RPS-NA-----GCAINPSRV--------FLKRLPATLSSMSLSLIRKWARISWLYVEAYATGLDGYMQYRDLKKWTSHRSSTDRVDAVLMAKSTAA-SPEERKKNEETALAA 854
G + F EG +LFDT+ TP++ EE + AA+K LG FK G+KV G+ +G A+G ++LL + GL+ +PG+ L CK C E KA+ R G R + ++ G G + G+ R+ RR C R+ + + + + G + P NA G + R+ L+ LP LS + L +R W+R++WLY+EAY GL Y++ RDLKKW SHRS T+R D+V++A++ A + EE+KK EE ALAA
Sbjct: 981 GNLVHATFREGDTVLFDTHVYAAKTPEQLEEEEREAAKKDPKYKRPKFGSSLGDFKAGEKVRTTGRTSGLIGQAKGGQQLLMEMGLWDVPGQAPIRVLECKACKEERKAIKAAITAFNRVGEARQQALDDAAREDQDGGGDGASPEEGTEGGAAG--------NRVGMRRHCCIRKAFAELKAFKVKLNKVEKMFKKAGHICIFLAKYHPELNAIERYWGYVKHLLRLSCEYSLPHMLEILPGALSGVPLGFVRGWSRVTWLYLEAYDEGLVDYLEVRDLKKWLSHRSPTERGDSVVLARAGAGKTEEEKKKAEEKALAA 1292
BLAST of mRNA_P-littoralis_Contig789.15.1 vs. uniprot
Match: A0A6H5KKI5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKI5_9PHAE) HSP 1 Score: 97.4 bits (241), Expect = 9.450e-21 Identity = 47/92 (51.09%), Postives = 61/92 (66.30%), Query Frame = 2
Query: 350 GGEGGEDTEPDRQGESDTRR-CCLRFVLSNLPAFKEQKNRVEEMFEAAGHRCIFLPKYHPECNAIERVWGHSKAIERRVCD*SVKSFLKTTP 622
GGE G+ + GE+ RR CC+ VLS L AF+E+ N VE +F+A GH CIFLPKYHPE NAIER WG+ K + R C+ S++ L+ P
Sbjct: 55 GGEDGDSSGSGAAGEAGKRRRCCVVRVLSELKAFREELNMVENLFKAHGHLCIFLPKYHPELNAIERYWGYIKHLLRLHCEYSLRHMLQVLP 146 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig789.15.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig789.15.1 >prot_P-littoralis_Contig789.15.1 ID=prot_P-littoralis_Contig789.15.1|Name=mRNA_P-littoralis_Contig789.15.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=139bp MSRTRQRSEGAFTRLWVVQAPRRKEGAEACVQKVYRRGESLGGAEETGEAback to top mRNA from alignment at P-littoralis_Contig789:26832..28188+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig789.15.1 ID=mRNA_P-littoralis_Contig789.15.1|Name=mRNA_P-littoralis_Contig789.15.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1357bp|location=Sequence derived from alignment at P-littoralis_Contig789:26832..28188+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig789:26832..28188+ >mRNA_P-littoralis_Contig789.15.1 ID=mRNA_P-littoralis_Contig789.15.1|Name=mRNA_P-littoralis_Contig789.15.1|organism=Pylaiella littoralis U1_48|type=CDS|length=417bp|location=Sequence derived from alignment at P-littoralis_Contig789:26832..28188+ (Pylaiella littoralis U1_48)back to top |