mRNA_P-littoralis_Contig789.9.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig789.9.1
Unique NamemRNA_P-littoralis_Contig789.9.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig789.9.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 494 bits (1273), Expect = 2.810e-173
Identity = 232/268 (86.57%), Postives = 244/268 (91.04%), Query Frame = 1
Query:    1 RQGHPVEHKVMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDVTHIAWGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHNMLHTFDGMDDLEE 804
            R+ HPVEHKV+ACLTIL RGN FGSIY LSWMS+  VQK FH+FC+HFATEMYDEHIFLP++ENGELDRVMGQYEKLGFPGAMGSTDVTHI W RCPYNQ RSYTGKEGKPT+GYQVTVNHAGRVLAVTEGFTGSTNDKTIIC D AVDRIR DKQY EK F V+ KDGTT TLKGCYLIVDNGYHKWR LIEPSKYPLS  DLLFSKRLESVRKDVECFFGILK+RFRILKLAMTYQ+QER+DYVFFTCCILHNMLHT DGM  LEE
Sbjct:  119 RRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEE 386          
BLAST of mRNA_P-littoralis_Contig789.9.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE)

HSP 1 Score: 459 bits (1182), Expect = 2.010e-160
Identity = 210/268 (78.36%), Postives = 232/268 (86.57%), Query Frame = 1
Query:    1 RQGHPVEHKVMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDVTHIAWGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHNMLHTFDGMDDLEE 804
            RQ HPVEHKV+A LTIL RGNCF SIY +SWMS+  VQ  FHKFCKHFA EMYDEHI+LP+++NGELD VM QY++LGF GAMGS DVTHI W +CPYN ARSYTGKEG PT+GYQVTVNHAGR +AVTEGFT STNDKT +CWDA V++IR D QYTEKTFDVYN+DGTT TLKGCYL+VDNGYHKW+ L+EP+KYPLS  D+LFSKRLESVRKDVECFFGILK  FRI K+AM Y EQERID VFFTCCILHNMLHTFDGMD L E
Sbjct:   90 RQSHPVEHKVLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVE 357          
BLAST of mRNA_P-littoralis_Contig789.9.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 440 bits (1131), Expect = 5.940e-152
Identity = 213/293 (72.70%), Postives = 231/293 (78.84%), Query Frame = 1
Query:   10 HPVEHKVMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDVTHIAWGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYT----------------------------EKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHNMLHTFDGMDDLEE 804
            HPVEHKV+A LTIL RGNCF SIY +SWMS+  VQ  FHKFC+HFA EMYDE I LPT+E+G+LD VM QY++LGF GA+GS DVTHIAW RCPYNQARSYTGKEG PTI YQVTV+HAGR +AVTEGFTGSTNDKTI+CWD AV++I  DK YT                            EKTFDVYN+DGTT TLKGCYL+VDNGYHKW+ LIEPSKYPLS  DLLFSKRLESVRKDVECFFGILK RFRILKLAM YQ QERID VFFTC ILHNMLHTFDGMD L E
Sbjct:   80 HPVEHKVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVE 372          
BLAST of mRNA_P-littoralis_Contig789.9.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE)

HSP 1 Score: 394 bits (1013), Expect = 1.170e-135
Identity = 189/260 (72.69%), Postives = 210/260 (80.77%), Query Frame = 1
Query:   25 KVMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDVTHIAWGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHNMLHTFDGMDDLEE 804
            +V+A LTIL +GNCF SI+ +SWMS+  VQ  FHKFC+ FA EMYDEHI LP +E+G+L  VM QY++LG                 CPYNQARSYTGK+  PTI YQVTV+HA R +AVTEGFTGSTNDKTI+CWDAAVD+IR DKQYTEKTFD+YN+DGTT TLKGCY + DNGYHKW+ LIEPSKYPLS  DLLFSKRLESVRKDVECFFGILK RFRILKLAM YQ QERID VFFTCCILHNMLHTFDGMD L E
Sbjct:   20 QVLAWLTILGKGNCFASIFQMSWMSAKTVQGVFHKFCRLFAREMYDEHIHLPAEESGKLHHVMKQYDRLG-----------------CPYNQARSYTGKDWFPTIAYQVTVDHASRAIAVTEGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVE 262          
BLAST of mRNA_P-littoralis_Contig789.9.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI)

HSP 1 Score: 385 bits (988), Expect = 2.030e-132
Identity = 179/217 (82.49%), Postives = 195/217 (89.86%), Query Frame = 1
Query:  154 MYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDVTHIAWGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHNMLHTFDGMDDLEE 804
            MYDEHI LPT+E+G+LD V+ QY++LGF GAMGS DVTHIAW RCPYNQARSYTGKEG PTIGYQVTV+HAGR +AVTEGFTGSTNDKT +CWDAAV++IR DKQYTEKTFDVYN+DGTT TLKGCY++VDNGYHKW+ LIEPSKYPLS  DLLFSKRLESVRKDVECFFGILK R RIL LAM +Q QERID VFFTCCILHNMLHTFDGMD L E
Sbjct:    1 MYDEHIHLPTEESGKLDLVIEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMDQLVE 217          
BLAST of mRNA_P-littoralis_Contig789.9.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 379 bits (973), Expect = 3.710e-127
Identity = 179/268 (66.79%), Postives = 215/268 (80.22%), Query Frame = 1
Query:    1 RQGHPVEHKVMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDVTHIAWGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHNMLHTFDGMDDLEE 804
            RQ  PVE KV+ACL IL+RGN F  IY +S++S   V  TFH+FCK+FA E+YDE+++LPT E  +L +VM QY+++GFPGA+GSTDVTHI WG CPYNQAR YTGKEGKPT+ +QVTV+H+GRVLAVT GFTG+TNDKTII +D AV RIR D  YTE+ + +Y +DG     KGCYL+VDNGYHKWRTLI PSK P+  GDL+FSKRLES RKDVEC+FGILK RFRI KLA+ + +QE ID VFFTCCILHNMLH+FD   D+ E
Sbjct:  166 RQAVPVELKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGE--DLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSE 431          
BLAST of mRNA_P-littoralis_Contig789.9.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 378 bits (970), Expect = 6.580e-127
Identity = 181/268 (67.54%), Postives = 212/268 (79.10%), Query Frame = 1
Query:    1 RQGHPVEHKVMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDVTHIAWGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHNMLHTFDGMDDLEE 804
            R+G PV+ KV+ACL ILARGNCF  IY +S++S      TFH+F ++FA EMY EHIFLPT +  +  +VM QY++LGF GA GSTDVTHI WG CPYNQARSYTGKEG PT+ YQVTV+H  RVLAVT GFTGSTNDK+II +D AV +IR+D  Y+EK F VY  DGT   LKGCYL+VDNGYHKW TLI PSKYP+   DL FSKRLESVRKDVECFFGI+K RFRILKL++ Y +QE ID VFFTCCILHNMLH++D   ++EE
Sbjct:  150 RRGIPVQLKVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQK--KVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEE 415          
BLAST of mRNA_P-littoralis_Contig789.9.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 371 bits (952), Expect = 3.010e-125
Identity = 174/264 (65.91%), Postives = 211/264 (79.92%), Query Frame = 1
Query:   13 PVEHKVMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDVTHIAWGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHNMLHTFDGMDDLEE 804
            P   +V+ACL IL+RGN F  IY +S++S   V  TFH+FCK+FA E+YDE+++LPT E  +L +VM QY+++GFPGA+GSTDVTHI WG CPYNQAR YTGKEGKPT+ +QVTV+H+GRVLAVT GFTG+TNDKTII +D AV RIR D  YTE+ + +Y +DG     KGCYL+VDNGYHKWRTLI PSK P+  GDL+FSKRLES RKDVEC+FGILK RFRI KLA+ + +QE ID VFFTCCILHNMLH+FD   D+ E
Sbjct:   79 PPHTQVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGE--DLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSE 340          
BLAST of mRNA_P-littoralis_Contig789.9.1 vs. uniprot
Match: D7FPI7_ECTSI (Transposon protein, putative, Pong sub-class n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI7_ECTSI)

HSP 1 Score: 337 bits (865), Expect = 4.620e-112
Identity = 152/198 (76.77%), Postives = 170/198 (85.86%), Query Frame = 1
Query:    1 RQGHPVEHKVMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDVTHIAWGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYP 594
            RQ HPVEHKV+A LTIL RGNCF SIY +SWMS+A VQ  FH FCKHFA EMYDEHI+LP+++NGELD VM QY++LGF GAMGS DVTHI W +CPYN  RSYTGKEG PTIGYQVTVNHAGR  AVTEGFTGSTNDKTI+CWDAAV++IR DKQYTEKTFDVYN+DGTT TLKGCYL+VDNGYHKW+ L+   + P
Sbjct:  117 RQSHPVEHKVLAWLTILGRGNCFASIYQMSWMSAATVQAMFHMFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIVWNKCPYNLPRSYTGKEGVPTIGYQVTVNHAGRASAVTEGFTGSTNDKTIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILMGAHQVP 314          
BLAST of mRNA_P-littoralis_Contig789.9.1 vs. uniprot
Match: A0A6H5L0X4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0X4_9PHAE)

HSP 1 Score: 334 bits (856), Expect = 5.610e-110
Identity = 169/268 (63.06%), Postives = 188/268 (70.15%), Query Frame = 1
Query:    1 RQGHPVEHKVMACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLPTDENGELDRVMGQYEKLGFPGAMGSTDVTHIAWGRCPYNQARSYTGKEGKPTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEKTFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRLESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHNMLHTFDGMDDLEE 804
            R  HPVEHKV+A LTIL R NCF SI+ +SWMS+  VQ  FHKFC+HFA +MYDEHI L  +E+G+LD V+      G                 CPYNQARSYTGKEG PTI YQV                      TI+CWDAAV++IR DKQYTEKTFDVYN+DGTT TLKG YL+VDNGYHKW+ LIEPSKYPLS  DLLFSKRL+SVR+D     GILK RFRILKLAM YQ QERID VFFTCCI+HNMLHTFDGMD L E
Sbjct:  164 RASHPVEHKVLAWLTILGRNNCFASIFQVSWMSAKTVQGMFHKFCRHFARDMYDEHIHLLAEESGKLDHVVRSGWVYG-----------------CPYNQARSYTGKEGFPTIAYQVV---------------------TIVCWDAAVEKIRTDKQYTEKTFDVYNEDGTTTTLKGWYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLDSVRRDGSASDGILKGRFRILKLAMAYQSQERIDDVFFTCCIMHNMLHTFDGMDQLVE 393          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig789.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JBE2_9PHAE2.810e-17386.57Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHI0_9PHAE2.010e-16078.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNX4_9PHAE5.940e-15272.70DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JUX7_9PHAE1.170e-13572.69DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
D7FSK2_ECTSI2.030e-13282.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JPH7_9PHAE3.710e-12766.79Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JAU4_9PHAE6.580e-12767.54Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KY50_9PHAE3.010e-12565.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPI7_ECTSI4.620e-11276.77Transposon protein, putative, Pong sub-class n=1 T... [more]
A0A6H5L0X4_9PHAE5.610e-11063.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig789contigP-littoralis_Contig789:11630..14635 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FSK2
PFAMsPlant_tran
Model size804
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue2.25e-133
EggNOG OGs2E2RF@1|root,2S9YA@2759|Eukaryota
DescriptionPlant transposon protein
Cds size774
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791613.9824317-CDS-P-littoralis_Contig789:11629..118721680791613.9824317-CDS-P-littoralis_Contig789:11629..11872Pylaiella littoralis U1_48CDSP-littoralis_Contig789 11630..11872 -
1680791613.9981716-CDS-P-littoralis_Contig789:12194..127251680791613.9981716-CDS-P-littoralis_Contig789:12194..12725Pylaiella littoralis U1_48CDSP-littoralis_Contig789 12195..12725 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791614.0089674-UTR-P-littoralis_Contig789:12725..127281680791614.0089674-UTR-P-littoralis_Contig789:12725..12728Pylaiella littoralis U1_48UTRP-littoralis_Contig789 12726..12728 -
1680791614.0239253-UTR-P-littoralis_Contig789:14608..146351680791614.0239253-UTR-P-littoralis_Contig789:14608..14635Pylaiella littoralis U1_48UTRP-littoralis_Contig789 14609..14635 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig789.9.1prot_P-littoralis_Contig789.9.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig789 11630..12725 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig789.9.1

>prot_P-littoralis_Contig789.9.1 ID=prot_P-littoralis_Contig789.9.1|Name=mRNA_P-littoralis_Contig789.9.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=258bp
MACLTILARGNCFGSIYMLSWMSSAVVQKTFHKFCKHFATEMYDEHIFLP
TDENGELDRVMGQYEKLGFPGAMGSTDVTHIAWGRCPYNQARSYTGKEGK
PTIGYQVTVNHAGRVLAVTEGFTGSTNDKTIICWDAAVDRIRKDKQYTEK
TFDVYNKDGTTRTLKGCYLIVDNGYHKWRTLIEPSKYPLSVGDLLFSKRL
ESVRKDVECFFGILKIRFRILKLAMTYQEQERIDYVFFTCCILHNMLHTF
DGMDDLEE
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mRNA from alignment at P-littoralis_Contig789:11630..14635-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig789.9.1 ID=mRNA_P-littoralis_Contig789.9.1|Name=mRNA_P-littoralis_Contig789.9.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3006bp|location=Sequence derived from alignment at P-littoralis_Contig789:11630..14635- (Pylaiella littoralis U1_48)
CGGCAAGGCCACCCAGTGGAGCATAAGGTGAGGTTAGGAGGTGCTTCACT CACTACTTTGGCGGTTGTACAGGTGGTGGAAGCAGTAGACTGTCCGCATG CATGTCTTGCACTATAGAGATGTGAATTCAAAAAATCGTACTAAATATAG AGCGCTGCAGGTACTGCTGTATGATGTCATACGTATAGTATCATACACCA AGTACTTCGTACTCTGTATTATAGTCTACTTCGTTCAGAGATGCTGTACT TAGCAGCAATAGCGTTGCTTCCGTTCCTGTGTACGTATAATACATAAGAG GATACAAAAAGGATGTGCCCGCCCCTCTTGCAGCACTAAAGCTGGTACAC CTGTACAGCACTAGTGAGGCTGCAAAAAATATTACCGTTCTCTCGCTTAT GGTCGATGGGCATTGCTGCATGCATTGGTGTCGCGTTTTACTCGGGTGCA GGCAGTGCCTGGTTGCGTATTTGCTCGTTATCGTGGCGATCCCATAGCTG CGTAAAAAAGGCTTATTTTTCTCATGAAGCCTCAACAACACAATGATACA GCGATATGATATGATATGATCTTCGTATTTCTCCTTGATAAGCTACGTAC CAGACAAGGTTCGTGTCCCTGTCAGCTGTCGCCTTCTAGAGCAGTACTGG TACTAGAATGTCGGTGCCGCGACGTTCTAGTGTGCAGGCAACTCCTGGAT GCCGACATGTGCCGATTAGTATAAGATTATCACACCAGTGATAAAGTACT GCAGTCTGAACACCACTAATGAGACCGTTTCTTACGGCTCCGTTATTTGG TCCAGCGTTTTTTCTCCTGAGGTATCCCCCCAATAAAAGAGAGCCCAAAC GGTTGAAAAATATACTTCTTGAGCATAACAGGAGATAGCACCGAGCAGAA CTCAACCCCTGGGACACCAATTGAGACTATAACTGTTAAACGGTACGCTC TAGTGTTCTCAGGTTGGCCACGGGAAATTTGGTGGGTGTGGGCTTCGGCT GTGGCGAGGTTTCGGCGGCGGAGTGGGTTGAGGTAGGAAAATCCGGTGGA AAAAAAAACGCTGTCCGAGCCTGTTTTTTGGCCGGAAAAACAAGAGCGAA GTCTGTTATTTCGTTTCATCTATTTTTCCATCTCCAACACACACCGCCGC CAAAATCTCGCCACAGCCCGAACCCACTGCCACCAAACTTCCTGTGGCCA ACTTGAGAACGTAGGAGCACACGATCTATCAGGTTTGATTGGCATCTGTG TCGTAGAGGTCGAGTTCTGGTTGGTGCTGTCGCACGATGTGTGCAATGGC GATCAAACCTATCGCCACGTCGCTTCAGTGTTCTGAGATTGGCCATGGCA AGTTTGATGGATGTGGGCCTTAGCTGCTGTAAGATTTTGCCGGTGGTGTA CGTCGTGGTAGAATAAACAATGCCAAAAGAATCCTGTTCGAGCAGGCTCG CACGGAAACAAAACAGGCTCGAACACAGCAGTCCACACATATTTTTTTTT TGTCATTGTTTGGGATACCTCAACCCACACCGCCGCCAAAACGAATTCGA CACAGCAAAAGCCCACACCCACCAAACTCCCTTCGGCTAAAACCTCAGCA CACGGGAGTGCACGCTCCAACAGGTTTGATCGCCATCGCTGCGTGCCAGA GGCCAAGTTCCGACTGGTGTTGCCGCGTGATGTGCTCAACAGTTTTTTGT TCGGTCGTTAGGAATCTTCTCCGTTTTCGGGGGGGGGGGGATCAAAATGA AATGATACAATACTCAGGAAACCAGAACCAGCCGTATGACCAGCCTCACA TTGTTCACACCTTCTTATTTTGATAAAGCACAACACCTTACATGACACCT TGTGGCTGATTGCGTGGATTCCCGTCCAATCAACAAATGTTGCGATTGGT GCTATAGGTGATGGCCTGCCTGACCATACTCGCCAGAGGGAACTGTTTCG GAAGCATCTACATGCTTTCGTGGATGAGCAGCGCGGTAGTGCAGAAGACG TTCCACAAATTCTGCAAGCACTTCGCGACGGAAATGTACGACGAGCACAT CTTCCTCCCGACGGACGAGAACGGCGAGCTTGACCGCGTTATGGGACAGT ACGAGAAGCTGGGGTTCCCGGGCGCAATGGGTTCCACTGATGTTACCCAT ATAGCGTGGGGTAGGTGCCCCTACAACCAAGCCCGCTCGTACACTGGAAA GGAAGGCAAGCCTACCATCGGGTACCAGGTGACGGTCAACCATGCTGGGC GCGTGTTGGCCGTGACAGAGGGGTTCACAGGGTCCACCAACGACAAGACG ATCATCTGCTGGGATGCAGCGGTGGACCGGATTCGCAAAGACAAGCAGTA CACGGAAAAGACATTTGACGTCTACAACAAGGATGGCACCACGCGAACCC TGAAGGGTTGCTACTTGATCGTTGACAACGGTTACCACAAGGTGAAAAAT GTTTGGTATCACATGGAACGCGATTGTGTTTTTGTCGAATCGCATGGGCA TTTTTGGCCGAACAAAAGTTCCTCCCAGTTAGCCGCGCTCAAAATTGTCC CCCACGTCCTCTTGGGTGCTGTGGACATGATTGTGTGACACTGAATTGCT CCCCATAATGGTGTTGTTGAAGCTGTGGGGGGATGAAGCAGTTGACAAGT TTACACAGTTCGTTTAGTACCCAATCCTCAAAATGGAACGCGGTACAGGA CGATTTATTAATACTTGATCATTCCAGGTGCGCCCTTTTTTTGTGTTCGT TCGTTCTATTCAGTGGCGGACGCTGATCGAGCCCTCCAAGTACCCGCTGA GCGTAGGCGACTTGCTCTTCTCGAAGAGGCTGGAGAGCGTAAGGAAGGAT GTGGAGTGCTTCTTCGGCATTCTGAAGATTCGCTTCAGAATCCTCAAGCT CGCCATGACCTACCAGGAGCAGGAGCGCATTGACTACGTGTTCTTCACGT GCTGCATCCTGCACAACATGCTGCATACCTTCGACGGCATGGACGACCTG GAGGAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig789:11630..14635-

>mRNA_P-littoralis_Contig789.9.1 ID=mRNA_P-littoralis_Contig789.9.1|Name=mRNA_P-littoralis_Contig789.9.1|organism=Pylaiella littoralis U1_48|type=CDS|length=774bp|location=Sequence derived from alignment at P-littoralis_Contig789:11630..14635- (Pylaiella littoralis U1_48)
ATGGCCTGCCTGACCATACTCGCCAGAGGGAACTGTTTCGGAAGCATCTA
CATGCTTTCGTGGATGAGCAGCGCGGTAGTGCAGAAGACGTTCCACAAAT
TCTGCAAGCACTTCGCGACGGAAATGTACGACGAGCACATCTTCCTCCCG
ACGGACGAGAACGGCGAGCTTGACCGCGTTATGGGACAGTACGAGAAGCT
GGGGTTCCCGGGCGCAATGGGTTCCACTGATGTTACCCATATAGCGTGGG
GTAGGTGCCCCTACAACCAAGCCCGCTCGTACACTGGAAAGGAAGGCAAG
CCTACCATCGGGTACCAGGTGACGGTCAACCATGCTGGGCGCGTGTTGGC
CGTGACAGAGGGGTTCACAGGGTCCACCAACGACAAGACGATCATCTGCT
GGGATGCAGCGGTGGACCGGATTCGCAAAGACAAGCAGTACACGGAAAAG
ACATTTGACGTCTACAACAAGGATGGCACCACGCGAACCCTGAAGGGTTG
CTACTTGATCGTTGACAACGGTTACCACAAGTGGCGGACGCTGATCGAGC
CCTCCAAGTACCCGCTGAGCGTAGGCGACTTGCTCTTCTCGAAGAGGCTG
GAGAGCGTAAGGAAGGATGTGGAGTGCTTCTTCGGCATTCTGAAGATTCG
CTTCAGAATCCTCAAGCTCGCCATGACCTACCAGGAGCAGGAGCGCATTG
ACTACGTGTTCTTCACGTGCTGCATCCTGCACAACATGCTGCATACCTTC
GACGGCATGGACGACCTGGAGGAG
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