mRNA_P-littoralis_Contig789.5.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig789.5.1 vs. uniprot
Match: A0A6H5L481_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L481_9PHAE) HSP 1 Score: 284 bits (726), Expect = 3.850e-84 Identity = 151/278 (54.32%), Postives = 197/278 (70.86%), Query Frame = 1
Query: 19 LDNEDI-TQKQLLIHMQSVCIVYACLAVKRNAGILDKESKLAAAAKGYEEIAVPGFFRWARDNDIVLPAWLTVEKMGCSTLTGAPILFKDGAKLWSRFDTAMRVMKRDFNPIWDRYIKGQLGKNTLPSGQTGDDAIDNLLDGLHAQTPGTVDCPLGEDDLVEATSSGRVGGAGEEKIDGXXXXXXXXXKDTQQGGASGKEGRIDGVKQE-----SXXXXXXXXXXGSPEELGDSNDYPERPKNWMHQYLMIFCLIGRPSSSEDPDLATARKTSGPPGR 834
L+N+ + T KQ ++ +Q+VCIVY+CLAVKRNAG++ E+K AAAA+GY EIAVPGFFRWARDNDI P+ LT++++G ++ GAP+L+ +G KLW++FD AM MK+ NPIWDRY+KGQ G N LPSGQTGDDAI+NLLDGL+++T G+ + P+ EDDLVE+T + G A EEK DG ++ G++G+ +K+E XXXX E+ GD +YP RP WMH L+I+C IGRPS SEDPDLATARKTSGPP R
Sbjct: 27 LENKKLFTLKQQMLFIQNVCIVYSCLAVKRNAGVVGTEAKRAAAAQGYREIAVPGFFRWARDNDITFPSELTMKRIGATSTDGAPVLYTNGKKLWTKFDAAMLKMKKFCNPIWDRYVKGQPGGN-LPSGQTGDDAINNLLDGLYSKTKGSAESPVQEDDLVESTPAADGGKAPEEKADGGAPNEDKPDQE-------GEKGKTAVIKKERNPDDDDASVXXXXVPSEDEQAGDDGEYPPRPDGWMHPLLLIYCFIGRPSDSEDPDLATARKTSGPPKR 296
BLAST of mRNA_P-littoralis_Contig789.5.1 vs. uniprot
Match: A0A6H5JUY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUY9_9PHAE) HSP 1 Score: 153 bits (386), Expect = 3.330e-39 Identity = 71/119 (59.66%), Postives = 93/119 (78.15%), Query Frame = 1
Query: 13 VLLDNEDITQKQLLIHMQSVCIVYACLAVKRNAGILDKESKLAAAAKGYEEIAVPGFFRWARDNDIVLP-AWLTVEKMGCSTLTGAPILFKDGAKLWSRFDTAMRVMKRDFNPIWDRYI 366
+LL + ++Q +LL H+Q+VCIVYACLAVKRNAGI+ E+K AAAKGY++IAVPGFF+W ++N IV+ AWLT E MG ++L GAP+LF DG KLW RFD MR MK+ +N +WDR +
Sbjct: 26 LLLGGKGLSQIKLLKHLQNVCIVYACLAVKRNAGIVSTEAKYKAAAKGYKDIAVPGFFKWLKENGIVIKQAWLTFEVMGRTSLNGAPVLFTDGKKLWKRFDKVMREMKKTYNKVWDRCV 144
BLAST of mRNA_P-littoralis_Contig789.5.1 vs. uniprot
Match: D7FPI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI6_ECTSI) HSP 1 Score: 152 bits (383), Expect = 2.790e-38 Identity = 72/145 (49.66%), Postives = 103/145 (71.03%), Query Frame = 1
Query: 25 NEDITQKQLLIHMQSVCIVYACLAVKRNAGILDKESKLAAAAKGYEEIAVPGFFRWARDN----DIVLPAWLTVEKMGCSTLTGAPILFKDGAKLWSRFDTAMRVMKRDFNPIWDRYIKGQLGKNTLPSGQTGDDAIDNLLDGLH 447
+ +T +LL H+Q+VCIVYACL VKRNAGI+ ++K AAAAKGY++IAV GFF+W ++N WLT E MG ++++G +LF G KLW RFD MR +K+ +NP+WD +++GQ G + LPSG +DAI+ LL+G++
Sbjct: 32 SSGLTDAKLLKHLQNVCIVYACLTVKRNAGIVSTQAKHAAAAKGYKDIAVLGFFKWLKENLEADQYFSQPWLTFEVMGRTSMSGDAVLFTHGKKLWKRFDNIMRALKKFYNPVWDSFVEGQPG-DQLPSGSQDEDAIEYLLNGVY 175
BLAST of mRNA_P-littoralis_Contig789.5.1 vs. uniprot
Match: A0A6H5KBX2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBX2_9PHAE) HSP 1 Score: 135 bits (339), Expect = 1.360e-31 Identity = 105/268 (39.18%), Postives = 129/268 (48.13%), Query Frame = 1
Query: 43 KQLLIHMQSVCIVYACLAVKRNAGILDKESKLAAAAKGYEEIAVPGFFRWARDN----DIVLPAWLTVEKMGCSTLTGAPILFKDGAKLWSRFDTAMRVMKRDFNPIWDRYIKGQLGKNTLPSGQTGDDAIDNLLDGLHAQTPGTVDCPLGEDDLVEATSSGRVGGAGEEKIDGXXXXXXXXXKDTQQGGASGKEGRIDGVKQESXXXXXXXXXXGSPEELGDSNDYPERPKNWMHQYLMIFCLIGRPSSSEDPDLATARKTSGPPGR 834
+Q+L H+Q+VCIVYACLAVKRNAGI+ ++K AAAA+GY++IAVPGFF+W ++N D L WLT E LG N + +T AI+ LLD ++ GT D +D +E G GG GE DG XX XXXXX S E + +P+RPK WMHQYL+ FCLIGRP SSEDPDL TARKTSG GR
Sbjct: 15 RQVLKHLQNVCIVYACLAVKRNAGIVSTQAKHAAAAQGYKDIAVPGFFKWLQENLDKEDFFLQPWLTFED--------------------------------------------NLGTNYRRAAKTN--AIEYLLDEVYRMESGTGDA----EDPIELEERG--GGEGEGSEDGSGESSPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDDAP-SEEITREEGGFPQRPKKWMHQYLLTFCLIGRPCSSEDPDLRTARKTSGAKGR 229
BLAST of mRNA_P-littoralis_Contig789.5.1 vs. uniprot
Match: A0A6H5JUN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUN8_9PHAE) HSP 1 Score: 131 bits (329), Expect = 5.950e-31 Identity = 89/229 (38.86%), Postives = 121/229 (52.84%), Query Frame = 1
Query: 241 MGCSTLTGAPILFKDGAKLWSRFDTAMRVMKRDFNPIWDRYIKGQLGKNTLPSGQTGDDAIDNLLDGLHAQTPGTVDCPLGEDDLVEATSSGRVGGAGEEKIDGXXXXXXXXXKDTQQGGASGKEGRID--------------GVKQESXXXXXXXXXXGSPEELG-DSNDYPERPKNWMHQYLMIFCLIGRPSSSEDPDLATARKTSGPPGRERTPRKQTTRGGKRKA 882
MG +++TG +LF DG KLW RF +R +K+ +NP+ +++GQ G + LPSG GDDAI+ LLDG++ GT + +D +E G GG GE D +D + G G E ++ G+K+E EE+ + +P+RP WMHQYL+ CLIGRP SSEDPDL TARK SGP R + K RGGK+KA
Sbjct: 1 MGKTSMTGGAVLFTDGEKLWKRFYKTLREIKKYYNPV---FVEGQPG-DQLPSGSQGDDAIEYLLDGVYHMESGTGNA----EDPIELEERG--GGEGEGWEDDSGESSPTESEDGESGKQKGTEEAVEPQESSGDDSPAGEGGMKKEPEDDTPGNGDDAPSEEITREEGGFPQRPNKWMHQYLLTLCLIGRPCSSEDPDLRTARKISGPKVRGASGAKG--RGGKQKA 217
BLAST of mRNA_P-littoralis_Contig789.5.1 vs. uniprot
Match: A0A6H5JGS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGS6_9PHAE) HSP 1 Score: 130 bits (327), Expect = 2.250e-29 Identity = 92/276 (33.33%), Postives = 129/276 (46.74%), Query Frame = 1
Query: 10 LVLLDNEDITQKQLLIHMQSVCIVYACLAVKRNAGILDKESKLAAAAKGYEEIAVPGFFRWARDNDIVLPAWLTVEKMGCSTLTGAPILFKDGAKLWSRFDTAMRVMKRDFNPIWDRYIKGQLGKNTLPSGQTGDDAIDNLLDGLHAQTPGTVDCPL----GEDDLVEATSSGRVGGAGEEKIDGXXXXXXXXXKDTQQGGASGKEGRIDGVKQESXXXXXXXXXXGSPEELGD-SNDYPERPKNWMHQYLMIFCLIGRPSSSEDPDLATARKTSG 822
L+L +++ +LL H+QSVCIVYACLAVKRNAGI+ E+K AAAKGY++IAVPGF++W R + A D + D G P G+ +D +D LL+G++ + G + P+ G+DDL + GG EE + G E + G+K+E E++ + +YP+R WMH YL+ +CLIGR SSSEDP+L TARKT G
Sbjct: 26 LLLGGGNGLSKIKLLKHLQSVCIVYACLAVKRNAGIVSMEAKHKAAAKGYKDIAVPGFYKWLRILQV-----------------------------------AQGQRHNDLAGVADVRAPG------TPXGEQEEDVLDYLLNGVYHLSSGNAEDPIELEDGDDDLED-------GGEPEE--------------------SEGDEPGVGGIKEEPAVGNQGDGDGAPSEDIEEVDGEYPDRGNKWMHPYLLTYCLIGRASSSEDPELRTARKTDG 233
BLAST of mRNA_P-littoralis_Contig789.5.1 vs. uniprot
Match: A0A6H5JM89_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM89_9PHAE) HSP 1 Score: 134 bits (338), Expect = 2.820e-29 Identity = 104/341 (30.50%), Postives = 147/341 (43.11%), Query Frame = 1
Query: 25 NEDITQKQLLIHMQSVCIVYACLAVKRNAGILDKESKLAAAAKGYEEIAVPGFFRW-ARDNDIVLPAWLTVEKMG---------------------------CSTLTGAPILFKDGAKLWSRFDTAMRVMKRDFNPIWDRYIKGQLGKNTLPSGQTGDDAIDNLLDGLHA----QTPGTVDCPLGEDDLVEATSSGRVGGA----------------------GEEKIDGXXXXXXXXXKDTQQGGASGKEGRIDGVKQESXXXXXXXXXXGSPEELGDSND----------YPERPKNWMHQYLMIFCLIGRPSSSEDPDLATARKTSGPPGRERTPRKQ 855
+ +T K+++ +Q+V + Y + VKRNAG +D + + A K Y++ VPGF +W + + D P WLT+E MG +L P L+KDG K+W+R+ A R +++D NP++D+ I Q G T PSG+ D +D LL L + TV+ E + + A G G EK G G A+G EG IDG P+ G+ +D YPERP NWM Y + FC GRPS+SED DLA + SGP G R PRK+
Sbjct: 27 GDGLTMKEVVRQLQTVALCYTAMGVKRNAGEIDSKKREALLLKAYKDDVVPGFLKWLSEEGDCTTPPWLTMEMMGRVAVHTCRHQWHRNAGAEEQGERETAATESLYEEPKLYKDGKKIWARYLDAFRDIRKDANPVYDKTIGDQPG-GTPPSGEQYADQLDELLQALWEYQCREKNKTVEVTAEEKEFLRARGPSAAKGXXXXXXXXXXXXXLSSTDGEVVQGTEKEGGGADAGKDEEVAAGAGRAAGSEG-IDGSGDGGAGREGQPMEQEQPKTPGEEDDGGSEPESVVQYPERPPNWMPYYFLTFCFFGRPSNSEDTDLAM-KAGSGPSGDSR-PRKK 363
BLAST of mRNA_P-littoralis_Contig789.5.1 vs. uniprot
Match: D7FSK1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK1_ECTSI) HSP 1 Score: 117 bits (292), Expect = 4.590e-25 Identity = 68/177 (38.42%), Postives = 100/177 (56.50%), Query Frame = 1
Query: 319 MRVMKRDFNPIWDRYIKGQLGKNTLPSGQTGDDAIDNLLDGLHAQTPGTVDCPLGEDDLVE-ATSSGRVGGAGEEKIDGXXXXXXXXXKDTQQGGASGKEG---RIDGVKQESXXXXXXXXXXGSPEELGDSND-YPERPKNWMHQYLMIFCLIGRPSSSEDPDLATARKTSGPPGR 834
MR MK+ +N +WD ++GQ G+N LPSG+ DA+D LL+G++ + G + P+ +D+ + + GGA + +G + GGA EG + G+K+E + + +++ YP+RP WMH YL+ +CLIGRPSSSEDPDL T RKTSGP GR
Sbjct: 1 MREMKKTYNKVWDSLVEGQPGEN-LPSGEQEGDALDYLLNGVYHLSTGNAEDPIELEDIDDDLDNDADDGGAAGLQDNGRNDGESPPGQVEDGGGAEESEGGAPAVGGIKEEPAVGNQGSGDGAPSDNIEEADGGYPDRPDKWMHPYLLTYCLIGRPSSSEDPDLRTTRKTSGPKGR 176
BLAST of mRNA_P-littoralis_Contig789.5.1 vs. uniprot
Match: A0A6H5KDP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDP2_9PHAE) HSP 1 Score: 104 bits (260), Expect = 6.150e-23 Identity = 51/85 (60.00%), Postives = 68/85 (80.00%), Query Frame = 1
Query: 13 VLLDNEDITQKQLLIHMQSVCIVYACLAVKRNAGILDKESKLAAAAKGYEEIAVPGFFRWARDNDIVLP-AWLTVEKMGCSTLTG 264
+LL + ++Q +LL H+Q+VCIVYACLAVKRNAGI+ E+K AAAKGY++IAVPGFF+W ++N IV+ AWLT E MG ++L G
Sbjct: 26 LLLGGKGLSQIKLLKHLQNVCIVYACLAVKRNAGIVSTEAKYKAAAKGYKDIAVPGFFKWLKENGIVIKQAWLTFEVMGRTSLNG 110
BLAST of mRNA_P-littoralis_Contig789.5.1 vs. uniprot
Match: A0A6H5JZP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZP4_9PHAE) HSP 1 Score: 104 bits (260), Expect = 4.570e-22 Identity = 51/85 (60.00%), Postives = 68/85 (80.00%), Query Frame = 1
Query: 13 VLLDNEDITQKQLLIHMQSVCIVYACLAVKRNAGILDKESKLAAAAKGYEEIAVPGFFRWARDNDIVLP-AWLTVEKMGCSTLTG 264
+LL + ++Q +LL H+Q+VCIVYACLAVKRNAGI+ E+K AAAKGY++IAVPGFF+W ++N IV+ AWLT E MG ++L G
Sbjct: 26 LLLGGKGLSQIKLLKHLQNVCIVYACLAVKRNAGIVSTEAKYKAAAKGYKDIAVPGFFKWLKENGIVIKQAWLTFEVMGRTSLNG 110 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig789.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig789.5.1 >prot_P-littoralis_Contig789.5.1 ID=prot_P-littoralis_Contig789.5.1|Name=mRNA_P-littoralis_Contig789.5.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=363bp MQSVCIVYACLAVKRNAGILDKESKLAAAAKGYEEIAVPGFFRWARDNDIback to top mRNA from alignment at P-littoralis_Contig789:5867..9934+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig789.5.1 ID=mRNA_P-littoralis_Contig789.5.1|Name=mRNA_P-littoralis_Contig789.5.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4068bp|location=Sequence derived from alignment at P-littoralis_Contig789:5867..9934+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig789:5867..9934+ >mRNA_P-littoralis_Contig789.5.1 ID=mRNA_P-littoralis_Contig789.5.1|Name=mRNA_P-littoralis_Contig789.5.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1089bp|location=Sequence derived from alignment at P-littoralis_Contig789:5867..9934+ (Pylaiella littoralis U1_48)back to top |