prot_P-littoralis_Contig787.3.20 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig787.3.20
Unique Nameprot_P-littoralis_Contig787.3.20
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length879
Homology
BLAST of mRNA_P-littoralis_Contig787.3.20 vs. uniprot
Match: A0A6H5L6N4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6N4_9PHAE)

HSP 1 Score: 316 bits (810), Expect = 5.660e-91
Identity = 392/926 (42.33%), Postives = 459/926 (49.57%), Query Frame = 0
Query:    1 MKSTHEIHVDLVRLLGSTEHLVSAGEPSADGSWEHWPRFCQFITSLGSIRSQLQARVAETVR-CDSSLS-APPSAEDLASYDRRLEVLRRNRDDLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS---KAMQKDPRSASLPIRNVDDEGGGXXXXXXXXXXXXXXXXXXXXGLFGGRREAGGGXXXXXXADEAEADQ------VAQEISSMAGRLKESSMAINQTLRTQTQVLEDTGDAATQNVDRVKRENARVSERLRNKRAAMVASWCMMITVLVTFLAAYVFVILPFEKRRGPFIA---QAFAQATEPRAHIPSQEXXXXXXXXXXXXXXXXXXXXXEQAYKAAARRAQSKLDSDNVGHRFATEQKEAFRERQAKRMMGAGREKREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDASQVLAGSCSAPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVSVSQVLGIIVYSSRGEAHHGVS-DEYRRKANQAYEERSRQEARDQESADAGLFLVAKEKEDYRRRESEQRVQKAE----------------------------ALRAKVAGKNAVEAMEQQEGEXXXXXALGGRAIEDSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLTEEARLAYQENSRRVEANTASQNEGLRIIAEEKEKYRQRQAQSIIEGA---KNRRLEQXXXXXXDKERVGTADLEDKTKG--LGQQSAAENAADDGAXXXXXXXXXXXXXXXXXXXXXXDEELSGLDAVRMRLREKLAREQG 878
            M+S HEIHVDLVRLL +TE LV+AGEPSADGSWEHWPRFCQFIT L S +SQLQA+VAE  R   + LS A P+AEDLA YDRRLE+LRR RDDLA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            + +++     S   RN  D                        G+FGGRR     XXXXXX              VAQEISSMAGRLKESS+AINQTLRTQTQVLEDTGDAA QNV RVKRENARVSERLR KRAAM ASWCMMITV+ TF A Y  VI+PFEKRRGPF+     AFAQA EPR  IPSQ                      ++AY+  ARRA+ + + DN  HR A E+KEAFR RQA+RMM A R+++                                                +Q +  S   P+S             XXXXXXXXX           XXXXXXX          XXXXXXXXX       XXXXXXXXXXX        +V  V G    +++       S +E+RR+ANQAYEERSR+E  +Q+S +AGL LVA+EKE YR++++E+ +Q A                             AL+ +  G                  A GG    D                                    XXXXXXXXXXXX                                               R  EEARLAY++N+RR   + ASQN G R+++EEKEKYRQRQA+ I+EGA   K +R EQ        E  G     D   G      +    A D  +      XXX             D+   GLDAVRMRLR+ L  ++G
Sbjct:    1 MQSAHEIHVDLVRLLSATERLVAAGEPSADGSWEHWPRFCQFITWLDSTQSQLQAKVAEVSRGAGAGLSPASPAAEDLADYDRRLEILRRKRDDLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAIFTPREDGDRVVRRREARGSSRGRNTKDSS-----------------QDDSGGVFGGRRRXXXXXXXXXXXXXXXXXXXXXXXXVAQEISSMAGRLKESSVAINQTLRTQTQVLEDTGDAAIQNVGRVKRENARVSERLRKKRAAMFASWCMMITVVATFFATYFLVIMPFEKRRGPFVTARTSAFAQAAEPRERIPSQHEHVATAAGAATAEEIQRRA--QEAYRETARRARGRHEGDNAAHRVAREEKEAFRHRQAERMMAANRDRKAAMKKNSQQKTLEAGTDSVPQHRREEGAEVGQVN--------------TQAVRCSAPPPASDEDSSGGAGAFGSXXXXXXXXXGDAKASAGSCTXXXXXXXDDDVTAAAAEXXXXXXXXXDSAEAAGXXXXXXXXXXXAAADTTDQTVPAVGGTEASAAQPVLDPAASVEEHRRRANQAYEERSRRETENQDSTNAGLRLVAEEKEKYRQQQAEKMLQAASERXXXXXXXXXXXXXXXXXXXXXXXXXAALQPRALG------------------ATGGETARDD----------------------------------NXXXXXXXXXXXXDERVGGGQVDRAGGPAAEVAEEADKGSDDAAALPPSVDSQENHQAGRRRAEEARLAYEQNARRAADSLASQNAGQRLVSEEKEKYRQRQAKKIMEGAARRKQQRHEQGGETSDQLELAGDGSPPDSETGRETADGTIGNPAEDPASGVGGDGXXXGATPAVGSSERGSDQGSGGLDAVRMRLRKSLGSKRG 841          
BLAST of mRNA_P-littoralis_Contig787.3.20 vs. uniprot
Match: D7FHQ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHQ2_ECTSI)

HSP 1 Score: 302 bits (773), Expect = 5.130e-86
Identity = 259/394 (65.74%), Postives = 284/394 (72.08%), Query Frame = 0
Query:    1 MKSTHEIHVDLVRLLGSTEHLVSAGEPSADGSWEHWPRFCQFITSLGSIRSQLQARVAETVRCDSSLSAP--PSAEDLASYDRRLEVLRRNRDDLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKAMQKDPRSASLPIRNVDDEGGGXXXXXXXXXXXXXXXXXXXXGLFGGRREAGGGXXXXXXADEAEADQVAQEISSMAGRLKESSMAINQTLRTQTQVLEDTGDAATQNVDRVKRENARVSERLRNKRAAMVASWCMMITVLVTFLAAYVFVILPFEKRRGPFIA---QAFAQATEPRAHIPSQEXXXXXXXXXXXXXXXXXXXXXEQAYKAAARRAQSKLDSDNVGHRFATEQKEAFRERQAKRMMGAGREKR 389
            M S HEIHV+LVRLL +TE LV+AGEPSA GSWE+WPRFCQFITSL S +SQLQARVAE  R   +  +P  P+AEDLA YDRRLE+LRR RD    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                        XXXXXXXXXXXXXXXXXXXX              X   ADEAEADQVAQEISSMAGRLKESS+AINQTLRTQTQVLEDTGDAATQNVDRVKRENARVSERLR KRAAM ASWCMMITV+VTF A Y  VI+PFEKRRGPF+A    AFAQA EPR  IPS+                      ++AY+  ARRA+ + + DN  HR A E+KEAFR RQA+RMM A R+++
Sbjct:    1 MPSVHEIHVELVRLLSATERLVAAGEPSASGSWENWPRFCQFITSLDSTQSQLQARVAEVSRGAGAGLSPALPTAEDLADYDRRLEILRRKRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------XERAADEAEADQVAQEISSMAGRLKESSVAINQTLRTQTQVLEDTGDAATQNVDRVKRENARVSERLRKKRAAMFASWCMMITVVVTFFATYFLVIVPFEKRRGPFVAARTSAFAQAAEPRERIPSEHDAAATAAGAATAEEIQRRA--QEAYRETARRARGRHEGDNAAHRVAREEKEAFRHRQAERMMAANRDRK 378          
BLAST of mRNA_P-littoralis_Contig787.3.20 vs. uniprot
Match: A0A835YQ05_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ05_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 4.170e-8
Identity = 41/78 (52.56%), Postives = 54/78 (69.23%), Query Frame = 0
Query:  224 MAINQTLRTQTQVLEDTGDAATQNVDRVKRENARVSERLRNKRAAMVASWCMMITVLVTFLAAYVFVILPFEKRRGPF 301
            M IN+TL+TQT +LEDT   A +N+ +V RE  RV+ +LR KR A  AS  +++TVL+TF+A Y FVI  F KRR  F
Sbjct:  719 MEINRTLKTQTALLEDTETVAAKNLSKVMREAERVAVQLRKKRRATCASCTVILTVLLTFMATYAFVIKAFSKRRSIF 796          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig787.3.20 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L6N4_9PHAE5.660e-9142.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHQ2_ECTSI5.130e-8665.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YQ05_9STRA4.170e-852.56Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 557..577
NoneNo IPR availableCOILSCoilCoilcoord: 76..96
NoneNo IPR availableCOILSCoilCoilcoord: 398..430
NoneNo IPR availableCOILSCoilCoilcoord: 248..268
NoneNo IPR availableGENE3D1.20.5.110coord: 194..263
e-value: 7.5E-7
score: 31.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..207
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 552..580
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 616..767
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 784..805
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 191..205
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 552..586
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 333..398
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 408..423
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 161..179
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 505..519
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 781..834
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 733..751
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..144
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 312..520
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 314..331
NoneNo IPR availablePANTHERPTHR13050:SF7VESICLE TRANSPORT PROTEIN USE1coord: 9..290
NoneNo IPR availableCDDcd15860SNARE_USE1coord: 202..260
e-value: 1.6794E-11
score: 58.3448
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 200..258
IPR019150Vesicle transport protein, Use1PFAMPF09753Use1coord: 9..289
e-value: 1.6E-15
score: 57.5
IPR019150Vesicle transport protein, Use1PANTHERPTHR13050USE1-LIKE PROTEINcoord: 9..290

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig787contigP-littoralis_Contig787:8144..34345 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig787.3.20mRNA_P-littoralis_Contig787.3.20Pylaiella littoralis U1_48mRNAP-littoralis_Contig787 7905..37060 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig787.3.20 ID=prot_P-littoralis_Contig787.3.20|Name=mRNA_P-littoralis_Contig787.3.20|organism=Pylaiella littoralis U1_48|type=polypeptide|length=879bp
MKSTHEIHVDLVRLLGSTEHLVSAGEPSADGSWEHWPRFCQFITSLGSIR
SQLQARVAETVRCDSSLSAPPSAEDLASYDRRLEVLRRNRDDLASAAAAA
AAVKSKSATENEPPPQHLRQAAATVSTGAATGSKSSSSKAMQKDPRSASL
PIRNVDDEGGGSGSGSGSGSGSGSGSGSGSGGLFGGRREAGGGRGGRREA
DEAEADQVAQEISSMAGRLKESSMAINQTLRTQTQVLEDTGDAATQNVDR
VKRENARVSERLRNKRAAMVASWCMMITVLVTFLAAYVFVILPFEKRRGP
FIAQAFAQATEPRAHIPSQEQQQQQQQQLDGGGAEEIRRRAEQAYKAAAR
RAQSKLDSDNVGHRFATEQKEAFRERQAKRMMGAGREKRERESGSRRNAS
ATREAAAAEVEAESRQRQQEEDDQEEKKDEDEHDNDASQVLAGSCSAPSS
DDTAGGGGGGGGGGDAVVGSCSAPPTDDDSGAAAAAPAAAASPVDSSSAP
PPANEDDDDGGDGDGDDLFAIEEAAAAGAAGAAAVSVSQVLGIIVYSSRG
EAHHGVSDEYRRKANQAYEERSRQEARDQESADAGLFLVAKEKEDYRRRE
SEQRVQKAEALRAKVAGKNAVEAMEQQEGEEEEQGALGGRAIEDSPEAAA
AEATTTATSITDGGVAVAVGGGGGGAKTFGEQAGSQQASGDGGIGIGGGG
GQDIEEEQVSATAGGDSGGAGGNAAAASSAEGPQEEARRRLTEEARLAYQ
ENSRRVEANTASQNEGLRIIAEEKEKYRQRQAQSIIEGAKNRRLEQQQQQ
QQDKERVGTADLEDKTKGLGQQSAAENAADDGAGARAAAAAAAAPSASAR
AAAAADEELSGLDAVRMRLREKLAREQG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019150Vesicle_transport_protein_Use1