mRNA_P-littoralis_Contig785.13.4 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig785.13.4 vs. uniprot
Match: D7FKL3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKL3_ECTSI) HSP 1 Score: 493 bits (1270), Expect = 9.370e-146 Identity = 301/434 (69.35%), Postives = 341/434 (78.57%), Query Frame = 1
Query: 121 MKMEKGLRLRRLEQVRQQSRQQAAAVRDEYRQRRQENKRAALRESKRQFEDRRASELLTLNEQLQAKLLEVGTAHRMATCSTLARKGEEERQRAKRSVSAERRRSRNLLAAKKKEAELRESRREIDAAQYRQEVWVEEGLDERDQAREEAHRQEAAAVARRSREELSARRMQQRVEEEGVANATQEAVVEVGSRLEDFKTSRVHATFVLKHGSVPGVRLMGVETAVGDPSKELQRMEALSKEREEAREEADYRAGERGHEAFVQHRDRRAAESVEQELKRLFELDRHHRLRNGAAETNLAALREREIRRAQ--SGALRGEDPRVPGTEITNLRGRHRPTTGDAGEGTLGLATKIDDREWQEWPAWWPTPPPPTGAASD--------TAAP--------SAWP-STRQGQPLPPVQERLRLVRETRQRLLQAAAR 1365
M++EKGLRLRRLEQVRQQSRQQAAAVR+EYR+R+ ENKRAAL+ESKR FED RA+ELL+LN+QLQAKLLEVGTAHRMA CSTLAR+GEEER RAKRSVSAERRR+RNLLAA K+E ELRE+RRE D AQ RQEVW +EG DER +ARE A QEA A ARR+REE + R++QR E+ G TQ VVEVG RLEDFKTSRVHA+FVLKHGS PG+ LMGVETAVGDPSKEL+R+EA KEREEA EEA YRA ERG EAF++ R++RAA VE ELKRL ELDR HRLRNGAAETNLAALREREIRRA+ G GE RVPGTE+TNLR R RP TGD G+G GLA +IDD EW+EWP+WWPTP ++ P SAWP S R P+PP QERLRLVRETR+ L++AAAR
Sbjct: 1 MEIEKGLRLRRLEQVRQQSRQQAAAVREEYRRRQAENKRAALQESKRHFEDNRAAELLSLNQQLQAKLLEVGTAHRMAACSTLAREGEEERLRAKRSVSAERRRNRNLLAATKRETELREARRESDLAQQRQEVWKDEGDDERLRAREAAVMQEAVAAARRAREEFESERLRQRAEKGGSVRTTQAPVVEVGPRLEDFKTSRVHASFVLKHGSTPGISLMGVETAVGDPSKELERLEASEKEREEAEEEAGYRAEERGQEAFMRCRNQRAARVVEAELKRLSELDRQHRLRNGAAETNLAALREREIRRARFGGGGRGGESIRVPGTEMTNLRERRRPATGDLGQGAPGLAPEIDDSEWREWPSWWPTPXXXXXXXXXXXXXXXXHSSIPXXXXXXXSSAWPYSGRTPGPMPPEQERLRLVRETRRGLVEAAAR 434
BLAST of mRNA_P-littoralis_Contig785.13.4 vs. uniprot
Match: A0A6H5KKD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKD4_9PHAE) HSP 1 Score: 363 bits (932), Expect = 3.920e-97 Identity = 779/2284 (34.11%), Postives = 915/2284 (40.06%), Query Frame = 1
Query: 2719 RYARADGDEIRRSGXXXXXXXXSSPLKPVALRPRPSQSQ--------------LEGTAPYNSIFSRRRQDDEGEEQADVKVADADGSGVSLPHGTGHTVLGRRSGTGSSWATPDSAPAXXXXXXXXXXXXXXXSLVAEAGSVGDVMSPPPPVVSKSRDDSGLGEEGPPQVGAETAPYFLPQQRHSLASGGGQXXXXXXXXXXXXXXXXXXXXXTLPPLDQELSELLERHRRLDREAALLTREAEAGAHRWGDNSD--STLSSSAPRSPSSSSHYGDTSSGTPRSGSSSS--NREAGRSTQDSTSDLTHAAPVSSRSGNVGGPSWRYRRRAGVAAEAAAR-----------ETSLXXXXXXXXXXXXXXXXXXXHAA-----AFSWDRELASTLAREGPAAPGWPSRWRPGVVPGSRAALGLWERAGGLD--RDDDEGDGDQGGSRGRANDEGVSPPDDV-DTAQEVTEWARRIQASIESMNRLVDGFQLAGGGSGXXXXXXXXXXXXXXXXXXXXXXXXXTTPDSSISGLPGAGYPPSGKSDGDVVVPGGLQSTGGGSGGSESAEETRGTSGAMPSA---------------LSAYGLESFASAQLGFRRGLEGLVKSGASERSDEEEKDTEKTRG---------------------WEETKGGERGGERGAAAGRER--------EGGSG--------------------------------GD---------------------------TKRSDRAPLSRSSSWSILARADAVLASASAXXXXXGTEFDGSSGDGCRHGGSVTSLSSGTSLGPDLEAEIASLEALAESLQQRKMRFEPKPALLVQQQQELEEHRRVIRATSVSRADSSPSNSHSFPGGSSEHSLHPIDIEGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------ADESELARHSIATETDSNAGAESVLAALAAFEAELDARDGAGGASSQLLAAGGARAGAPALGLDGTPAGGDDGSNGVRSGGIRPRSSXXXXXXXRSGGYREDGEGSERWSEGLHSRMRTSEEWGVNYGVDHRHRQQPP----LLPSDSAASSSMESYNGLMRQLASFDTEAALRRATSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA---------------------------TAVDADTEKAQGST-------GGINERLGDPSYT-----IEQQGSTSSTIIGSAFQRRHGEAG----GRTEGDPTTXXXXXXXXXXXXXGV------------------------------------------------------QILVPAAGGTPSGS---------------------KVEKGPDSGSSIDRENQSRRGGVDARGGEERT-------------------------------HGM--APAGAFGGGAAGFKPPSLLGEGSSSSFP------AFVGPFGAAGAVSPLAMTPEGGAG----RQGWRDRGAEQSRVFVGGEGSGXXXXXXRDPADGFSXXXXXXXXXXGSSSLYRDKPSLRQRRWVDGLAGDGDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDTXXXXXXLVRGEXXXXXXXGADSDADAGPSLESHTVXXXXXXXXNAFESAGLPSPPPAQHELSLDTDLLVEPSRPAAADNGHEEEQGALTPLEAPGWGSLAEYIEGTSTNSRGSAAAAWRDLSMEEQELILENTGGGVLGLARERGAAGVGGAEALESGAEAEESRGGGNARGREGGVGSDGXXREGXXSGSSDGVTGEAGGGDLDSEEKYSATGVERYDDEHFFGRAGAGGGDLRGNDRGADDDQGKSTISAPAAADAAGDDRAEQAVRFAGDGNQFFSDDGADGTVTPDVSGGGGAALGVAAGDVSWANSGGGVRXXXXXXXXX-----------ESGDLNRGGEGGEPFTPRRAHDD-DIEGLGYYTGVDDGDXXXXGGRRDNIWSRPLSEDRDGGPSLTLPP--ARAGEAA-ERYGEIVSGGR--EDTTLTQDSLNFSEPSLDSLAMWQEGRSARRELEPADRRQPAQTGGLAVSWELGSAAALGEE-QLDPSAAERPDEGQGAGRRREGEREGGGG--------LAAYFNSKAPAFISRSKAREEALRQRKDSRLKARDDAXXXXXXXXXXXXXXXXXXXXXXXXQG-RGAVDARAGGEVGADVAAVPRSGFGETGGRGGRRRVSVQEARQRTARLYNALPEVREXXXXXXXXXERVKRLLEARAVEKDRYRFR 8541
R A + +++R SG SP KPVALRPRPSQ Q E T PY+SIF RR+ DDE + D +VA G V P +G G R+G S W TP A S++AE GS GDV GEEGP + GG TLPPLDQEL+ELLER EAAL+TR+AEA A+RW D+ +TLSS APRSPSS HY S + RS S N E R + + D P + + G WR+ GVA A + TS XXXXXXXXXXXXXXXX A A SWDRELA TL+REGPA PGW SRWR +PGSRAALGLWE AGGLD D+ G + GS VSP D DTAQEVTEWARRIQASIE+MNRLVDGFQLAG GS T+PDSS+SG+P + DGD + G + + S S +RG A+ A LSAYG E FASAQ GFRRGLEGLVKSG + +R G + GG + GR EG G GD K R+ LS SS+ S++ RADAVLA A+ G LGPDLEAEIASLEALAESLQQRKMRFEPKPALLVQQQQELEEHRR IRATSV+ + SS +S P S + X XXXXXXXXXXX D S R S+AT+ DSNAGA+S LAAL AF+AEL+AR+ + A G R+ P + PR+ XX GG +EWG D R + P + ES NGL+ +L S DTEA + A + AVD D +A S GG L +P +E++G + A R G AG TEG G V A G G+ G GSS ++ R G D R E T H + A G+ G G + S GE + + F VGP G VSPLAMTP+G +G R+G R Q G G G XXXXXXXXXX ++ R RRW+DGL GDDXXXXXXXXXXXXXXXXXX G V G D+ A + F+ + PSP PA +LSLD ++LVE +R A D+G GA TPLEAPGWGSLA+YIEGTSTNS GSAA WRDLS EEQ+LILE G G G A V G +E A E G GSDG SSD +G E + + DE FG AALG++ GD+SWA XXXXXXXXX E+G + G G RRAHD+ D+ G G G + XXXX R D WSR LS G + L P A AGEAA R+G G R EDT LT+DSL FSEPSLDSLAM +EG R EP G A +WE+GSA + +E Q P+ R + G R EG LAA+F S+A FI+RS+AREEA+RQ XXXXXXXXXXXXXXXXXXXXX Q + V A G DVA P GE+GG RRRVS+QEAR+RTARLYN+LPEVRE XXXXXXXXERV+RLLEARA+EK R+R R
Sbjct: 20 RRAGINENDVRNSGSTGGITR--SPFKPVALRPRPSQPQAXXXXXXXXXXXXAFEATTPYSSIFPRRQGDDE---RTDSRVAG--GGDVGPPGLSG----GIRTGRESVW-TPRGTAAGAAAAVGDAGS----SVMAEPGSAGDVR----------------GEEGPAXXXXXXXXXXXXXXXXXPSGDGG--GVTREGTRGGESEVGSSSTSTLPPLDQELTELLER------EAALITRQAEADANRWDDDDXXANTLSSRAPRSPSSPDHYATDSYSSWRSSGSGDKENEEQKRGSSEEGGDGFLVPPGTHQFGGXX-XGWRFGSGPGVAGGRAGQIRLGAGSGGSAGTSXXXXXXXXXXXXXXXXXGASVVAPGGADAVSWDRELARTLSREGPAVPGWTSRWRQPAMPGSRAALGLWEGAGGLDVVERDEAGVVEIAGS--------VSPGDGAADTAQEVTEWARRIQASIENMNRLVDGFQLAGDGSSSTSRSEAAGTV--------------TSPDSSMSGVPR-------RDDGDALYSGVTADSASHATVSRS-RGSRGVERAVVGAAXXXXXXXXXXXXXSLSAYGFEGFASAQQGFRRGLEGLVKSGVGGGGGASQTGFSSSRAGFGSGSATCTLPPGEPAAXXXXXXXGGSDVGGTSASGVGRTSRSFSPPALEGVDGRPSTAEHHSADGSHEXXXXXXXXXXXXXXXAKGDGAVRWKGXXXXXXXXXXXXXXXXXXXXIKPFVRSSLSSSSASSVMGRADAVLAEAA---RGIGLXXXXXXXXXXXXXXXXXXXXXXXXLGPDLEAEIASLEALAESLQQRKMRFEPKPALLVQQQQELEEHRRAIRATSVAGSLSS----NSRPSASDHTNXXXXXXXXXXXTSSWSSXXXXXXXXXXXSSRLSSGHTNSSNNSNNILLLPSRGNEGVDGSHEVRRSVATDVDSNAGADSALAALEAFQAELEARE------KEATAGGEGRSAPP----------------------VPPRAPGQGTPXXXPGGC-------------------VGDEWGHGVHDDDAGRPRTPRPXXXXXXXXXXXXTPESDNGLIERLLSLDTEAIRKHAAAVAAGGDGCGSSSRGPSFPSSHGGAAVGGYADGRDAAPGAGPGPVELRDTDERPPFGRPSEAAVDDDHHRAVFSVPRAAEAEGGGETILDNPQQQQQETRLEEEGPRDIGV--DAGDGRCGGAGPAAAATTEGGGQASGSDHSVSFNAGAGPGSSTXXXXXXXXXGADGRYSXXXXXXXXXXXXXXXXXXXXXXXXETRLEEEGPRDAAVDAGDGRCGGAGPAAAXXXXXXXQASGSDLSVSFNAGAGPGSSTTGGSEWWRRGADGRYSESETXXXXXXXXXXXXXXXXXXHRSLQRAAPRGPRHSVHAASTGSEEKGLDGGEDSSGGGETAETGFMLPSPTGGVVGPLGGGEEVSPLAMTPQGASGPLPNRRGSRRHHQPQ------GTGDGEGGFFGSRXXXXXXXXXXXXXXXXXXXXATENRTPSRGRRWIDGL---GDDXXXXXXXXXXXXXXXXXXHTPATAARPFGANEGDDGD---GAAAVLADGAVPGTDPRRRNDAVDTAA------RPPAASPRSSEAASLFDGSSSPSPSPAS-DLSLDPEILVE-TRQQAVDSGGGG--GAATPLEAPGWGSLADYIEGTSTNSAGSAAVVWRDLSAEEQDLILEKAGSGGRGSAXXXXE--VEGVVEVEGYGYAGE------------GAGSDGRAA------SSDYGSGXXXXXXXXVAEIKTGRAEQ---DEVLFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------AALGISDGDLSWATQDXXXXXXXXXXXXXXXXXXXXXXXXEAGHVLDAG-GNAWAIARRAHDECDLFGGGMEEGGNXXXXXXXXXRGDESWSRSLS-----GEEIELEPLPATAGEAAGPRHGHEGGGIRQGEDTALTEDSLKFSEPSLDSLAMAREGPPGR---EPGAHAAARPAG--AAAWEIGSAEVVRDETQERPAPDHRGCDAGGPSGRSEGXXXXXXXXXXXXXXELAAFFRSRASGFIARSRAREEAVRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRDQPHQTGVGPGARMRGGVDVAGPPSGLLGESGGXXXRRRVSIQEARKRTARLYNSLPEVREAXXXXXXXXERVRRLLEARALEKSRHRSR 2108
BLAST of mRNA_P-littoralis_Contig785.13.4 vs. uniprot
Match: D7FKL2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKL2_ECTSI) HSP 1 Score: 188 bits (477), Expect = 2.850e-44 Identity = 241/626 (38.50%), Postives = 281/626 (44.89%), Query Frame = 1
Query: 6766 ELSLDTDLLVEPSRPAAADNGHEEEQG-----ALTPLEAPGWGSLAEYIEGTSTNSRGSAAAAWRDLSMEEQELILENTGGGVLGLARERGAAGVGGAEALESGAEAEESRGGGNARGREGGVGSDGXXREGXXSGSSDGVTGEAGGGDLDSEEKYSATGVERYDDEHFFGRAGAGGGDLRGNDRGADDDQGKSTISAPAAADAAGDDRAEQAVRFAGDGNQFFSDDGADGTVTPDVSGGGGAALGVAAGDVSWANSGGGVRXXXXXXXXXESGDLNRGGEGGEP-----------FTPRRAHDD-DIEGLGYYTGVDDGDXXXXGGRRDNIWSRPLSEDRDGGPSLTLPPARAGEAA-ERYGEIVSGGR--EDTTLTQDSLNFSEPSLDSLAMWQEGRSARRELEPADRRQPAQTGGLAVSWELGSAAALGEEQLDPSAAERPDEGQGAGRRREGERE-------------GGGGLAAYFNSKAPAFISRSKAREEALRQRKDSRLKARDDAXXXXXXXXXXXXXXXXXXXXXXXXQGRGAVDARAGGEVGADVAAVPRSGFGETGGRGGRR-RVSVQEARQRTARLYNALPEVREXXXXXXXXXERVKRLLEARAVEKDRYRFR 8541
+LSLD D+LVEP + A A TPLEAPGWGSLA+YIEGTSTNS GSAA AWRDLS EEQ+LILEN G G G XX +G + S G T +D+ F G G + + G + +Q A AA AAG AALG+ GD+SWA + GD GG GGE RRAHD+ D+ G G G + G GR D WSR LSE+ L PA AG+AA RYG G R EDTTLT+DSL FSEPSLDSLAM +EG R EP TG A +WE+GSA + Q P+ PD GA G E G LAA+F S+A FISRS+AREEA+RQR XXXXXXXXXX + RG VD VA P GE+G RVS+QEAR+RTARLYN+LPEVRE XXXXXXXXERV+RLL+ARA+EK R+R R
Sbjct: 419 DLSLDPDILVEPHQQAVDSXXXXXXXXXXXXXAATPLEAPGWGSLADYIEGTSTNSAGSAAVAWRDLSTEEQDLILENAGSGGRGPXXXXXXXXXXXXXXXXXXXXXX-------------------XXXDGRAASSDYGNXXXXXXXXXXXXVAEMKTARAEHDEVLFAGGRGPXXXXVLPSTAGDEKEQ----FVAGAAPGAAGRSXXXXXXXXXXXXXXXXXXXXXXXXX---------AALGIGDGDLSWATQ------------ADDGGDYRSGG-GGEAGRVLDAGSNAWAIARRAHDERDLFGGGMEEGRNGGGGDVDDGRGDESWSRSLSEEES---ELEPLPATAGDAAGPRYGHEGGGIRREEDTTLTEDSLKFSEPSLDSLAMAREGPPGR---EPGAHAAARPTG--ASAWEVGSAVVRDQTQERPA----PDHRGGAAGGTRGRSEEXXXXXXXXXXXXXAGELAAFFRSRASGFISRSRAREEAVRQRXXXXXXXXXXXXXXXXXXXXXRRDQPHQTGVGPGARMRGGVD----------VAGPPSGLLGESGXXXXXXXRVSIQEARKRTARLYNSLPEVREAXXXXXXXXERVRRLLQARALEKSRHRSR 977 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig785.13.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig785.13.4 >prot_P-littoralis_Contig785.13.4 ID=prot_P-littoralis_Contig785.13.4|Name=mRNA_P-littoralis_Contig785.13.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=2851bp GLCGGTGDTAAPSIGVAGGGIVSGNRQHLHYSPGEEQAVRMKMEKGLRLRback to top mRNA from alignment at P-littoralis_Contig785:74027..93886- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig785.13.4 ID=mRNA_P-littoralis_Contig785.13.4|Name=mRNA_P-littoralis_Contig785.13.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=19860bp|location=Sequence derived from alignment at P-littoralis_Contig785:74027..93886- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig785:74027..93886- >mRNA_P-littoralis_Contig785.13.4 ID=mRNA_P-littoralis_Contig785.13.4|Name=mRNA_P-littoralis_Contig785.13.4|organism=Pylaiella littoralis U1_48|type=CDS|length=8553bp|location=Sequence derived from alignment at P-littoralis_Contig785:74027..93886- (Pylaiella littoralis U1_48)back to top |