prot_P-littoralis_Contig1197.23.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1197.23.1
Unique Nameprot_P-littoralis_Contig1197.23.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length125
Homology
BLAST of mRNA_P-littoralis_Contig1197.23.1 vs. uniprot
Match: A0A6H5JMP6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP6_9PHAE)

HSP 1 Score: 132 bits (331), Expect = 3.290e-33
Identity = 65/123 (52.85%), Postives = 84/123 (68.29%), Query Frame = 0
Query:    3 WEYKGRTQAGVEVDWLSEDQILKAKSFTPLQLDGFIALWHLYHPNITPSEEANHDPRAAIA----LSRKAALQLYPIGTHVQKDFGSGLTLNGQVFDFKDRYWRVRYTDNNWEEVTRTELKRL 121
            WEY+G+  +G   DWLSED +L+  SFTPLQLDGF+ALWHLYHP     ++AN  P  ++     LSR  AL+L+PI   ++K+   G+ L GQVFDF   YWRV Y+D NWEE+ R EL+RL
Sbjct:  758 WEYRGKLGSGAVSDWLSEDVMLR--SFTPLQLDGFVALWHLYHP-----QQANDLPPVSVKPRAPLSRAEALKLFPIDFTLRKELDGGVNLQGQVFDFLQPYWRVGYSDQNWEELARRELERL 873          
BLAST of mRNA_P-littoralis_Contig1197.23.1 vs. uniprot
Match: A0A6H5KEH2_9PHAE (RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEH2_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 5.640e-32
Identity = 62/121 (51.24%), Postives = 80/121 (66.12%), Query Frame = 0
Query:    3 WEYKGRTQAGVEVDWLSEDQILKAKSFTPLQLDGFIALWHLYHPNITPSEEANHDPRAAIALSRKAALQLYPIGTHVQKDFGSGLTLNGQVFDFKDRYWRVRYTDNNWEEVTRTELKRLLR 123
            WEYKG++  GV  DWL E+ +   +SFTPLQLD F+ALWHLY P +  +  A    +    LSR  AL ++PIG   QK+   G+ L GQV+D+   YWRVRYTD NWEE++R EL+RL R
Sbjct: 1764 WEYKGKSGNGVVSDWLPEETM--RRSFTPLQLDCFVALWHLYFPQLA-NASAPDSVKPRTPLSRAQALHVFPIGFTFQKELAGGILLQGQVYDYVSPYWRVRYTDGNWEELSRRELERLAR 1881          
BLAST of mRNA_P-littoralis_Contig1197.23.1 vs. uniprot
Match: A0A6H5KNP4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNP4_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 5.600e-20
Identity = 52/123 (42.28%), Postives = 71/123 (57.72%), Query Frame = 0
Query:    2 SWEYKGRTQAGVEVDWLSEDQILKAKSFTPLQLDGFIALWHLYH-PNITPSEEANHDPRAAIALSRKAALQLYPIGTHVQK---DFGSGLTLN-GQVFDFKDRYWRVRYTDNNWEEVTRTELK 119
            +WEY+G+ Q G    WL+ED +    SF+PLQLD F ALW  YH  ++ P              +R+AALQ +P+ T V K   D    + L+ G+V DF D YWRV ++D +WEE TR EL+
Sbjct: 1565 AWEYRGKYQDGTTSSWLTEDTV--KDSFSPLQLDVFHALWEDYHGSDVAPRPPGAPTRGEREVATREAALQEFPLNTEVAKELRDKDDNIILSRGKVCDFYDPYWRVEFSDGDWEEFTRRELR 1685          
BLAST of mRNA_P-littoralis_Contig1197.23.1 vs. uniprot
Match: A0A6H5K3V4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3V4_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 4.970e-19
Identity = 49/123 (39.84%), Postives = 73/123 (59.35%), Query Frame = 0
Query:    2 SWEYKGRTQAGVEVDWLSEDQILKAKSFTPLQLDGFIALWHLYH-PNITPSEEANHDPRAAIALSRKAALQLYPIGTHVQKDF----GSGLTLNGQVFDFKDRYWRVRYTDNNWEEVTRTELK 119
            +WEYKG+ Q G   DWL+ED +    SF+PLQL  F AL   YH  ++ P              +R+AAL+ +P+ T V ++     G+ +   G+V DF D YWRV+++D++WEE+TR EL+
Sbjct: 2110 AWEYKGKYQEGTPSDWLTEDTV--KDSFSPLQLGIFHALCEDYHGTDVAPRPPGALSRGEHEVATREAALKEFPLDTEVARELLDSDGNVVVSRGKVCDFYDPYWRVKFSDDDWEELTRRELR 2230          
BLAST of mRNA_P-littoralis_Contig1197.23.1 vs. uniprot
Match: A0A6H5JAJ3_9PHAE (RT_RNaseH_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAJ3_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 3.350e-16
Identity = 46/122 (37.70%), Postives = 67/122 (54.92%), Query Frame = 0
Query:    2 SWEYKGRTQAGVEVDWLSEDQILKAKSFTPLQLDGFIALWHLYHPNITPSEEANHDPRAAIAL-SRKAALQLYPIGTHVQKDF----GSGLTLNGQVFDFKDRYWRVRYTDNNWEEVTRTEL 118
            +WEY+   Q G    W +E+++    SF+PLQLD F AL+ L++        A    R    + SR+ ALQL+P+GT V ++F    G         FD  D YWRV Y D +WEE+T++E+
Sbjct: 1813 TWEYQDHYQDGALSPWPTEEEV--GDSFSPLQLDVFHALYELFYGENGAPRPAGPPTRGEREVASREQALQLFPVGTQVGREFADSDGHLKVFKATAFDCCDPYWRVEYPDGDWEELTKSEM 1932          
BLAST of mRNA_P-littoralis_Contig1197.23.1 vs. uniprot
Match: A0A6H5KBF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBF4_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 6.720e-12
Identity = 33/59 (55.93%), Postives = 41/59 (69.49%), Query Frame = 0
Query:   64 LSRKAALQLYPIGTHVQKDFGSGLTLNGQVFDFKDRYWRVRYTDNNWEEVTRTELKRLL 122
            L R  ++Q+   G   QKDFG G  L GQVF  +DRYWRVRY++ NWEE+TR EL+R L
Sbjct: 1068 LQRGLSVQVKMQGFTSQKDFGGGQKLQGQVFGHRDRYWRVRYSNQNWEELTRQELERCL 1126          
BLAST of mRNA_P-littoralis_Contig1197.23.1 vs. uniprot
Match: A0A836CCZ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCZ7_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 1.200e-7
Identity = 29/75 (38.67%), Postives = 45/75 (60.00%), Query Frame = 0
Query:   50 PSEEANHDPRAAIALSRKAALQLYPIGTHVQKDF----GSGLT-LNGQVFDFKDRYWRVRYTDNNWEEVTRTELK 119
            P +     P+    + R++ALQLYPIGT + ++     G  +T + G V +F   YWR+RY D  WE++TRT++K
Sbjct:   59 PRQRDRPTPKEDAGMRRESALQLYPIGTALVREHRTVVGGPITYVWGAVKNFVSPYWRIRYEDGEWEQMTRTQVK 133          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1197.23.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JMP6_9PHAE3.290e-3352.85Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KEH2_9PHAE5.640e-3251.24RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp.... [more]
A0A6H5KNP4_9PHAE5.600e-2042.28Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K3V4_9PHAE4.970e-1939.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JAJ3_9PHAE3.350e-1637.70RT_RNaseH_2 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5KBF4_9PHAE6.720e-1255.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CCZ7_9STRA1.200e-738.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1197contigP-littoralis_Contig1197:51274..51648 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1197.23.1mRNA_P-littoralis_Contig1197.23.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1197 51258..51681 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1197.23.1 ID=prot_P-littoralis_Contig1197.23.1|Name=mRNA_P-littoralis_Contig1197.23.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=125bp
MSWEYKGRTQAGVEVDWLSEDQILKAKSFTPLQLDGFIALWHLYHPNITP
SEEANHDPRAAIALSRKAALQLYPIGTHVQKDFGSGLTLNGQVFDFKDRY
WRVRYTDNNWEEVTRTELKRLLRA*
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