mRNA_P-littoralis_Contig780.1.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig780.1.1 vs. uniprot
Match: D7FXR9_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR9_ECTSI) HSP 1 Score: 472 bits (1215), Expect = 2.350e-162 Identity = 240/343 (69.97%), Postives = 275/343 (80.17%), Query Frame = 1
Query: 7 SLPYRHQLVSLLLVLVLVLQPPSARAIVYNVSASGSGLDLYEAMDLAEAGDTVSLADGTYDGAIVSTRDGTKDNPITVVGGADAIINGEFGDRSVHITHSFMTLKGFSVQGKIGPSNSTED--YVEKCVYVEGTGGVNSSSPLDGFVMEGLSIENCGGECVRLKDYVVNANITGNTIQNCGIYDYEFPSDEKNGEGVYIGTSSNQWTYGPDACDNNVVKANNISTSGNECVDIKEGATGNIIEDNVCSNQLDANSGCYDSRGDGNTFRYNVGSDCVGAGVRLGGWEIDGHQYGVNNSVYGNRFLAVGFGAIKILVAGQGDICGNSCEDGSCGLTGNALAEIRE 1029
SLP L S LL+ + PSA A+ YNVSA G G+DLYEAMDLAEAGDTV+L +GTYD A+VS RDG +PITV GG AII G RSV ITHSF+TLKGFSV+GKIG SN T+ +V KCVYVEG G NSS+ LDGFVME + ++NCGGECVRLKD VVNA +TGNTI NCG++DY F S++KNGEGVYIGTSS QWT G D C+ NVV N ISTSGNECVDIKEG++GN+IEDN CS+QLDA SGCYDSRGDGNTFRYNVGS+C GAGVRLGGWE+DGHQYGVNNSVYGN F AVG GA+K+LV QGDICGN+CE+GSC LTG+ +E R+
Sbjct: 14 SLPVPRLLRSALLLXXXXVLSPSAFAVTYNVSADGDGIDLYEAMDLAEAGDTVNLQNGTYDSALVSIRDGEFGSPITVAGGPGAIIKGSSSSRSVFITHSFITLKGFSVEGKIG-SNDTDQASWVNKCVYVEGPG-ANSSAVLDGFVMEDMVVQNCGGECVRLKDSVVNAQVTGNTISNCGVHDYMFNSEDKNGEGVYIGTSSTQWTNGEDTCNGNVVSRNLISTSGNECVDIKEGSSGNVIEDNFCSDQLDAESGCYDSRGDGNTFRYNVGSECTGAGVRLGGWEVDGHQYGVNNSVYGNDFYAVGVGALKVLVGEQGDICGNTCEEGSCSLTGDDESERRD 354
BLAST of mRNA_P-littoralis_Contig780.1.1 vs. uniprot
Match: D7FXR8_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR8_ECTSI) HSP 1 Score: 463 bits (1191), Expect = 2.980e-156 Identity = 231/334 (69.16%), Postives = 267/334 (79.94%), Query Frame = 1
Query: 7 SLPYRHQLVSLLLVLVLVLQPPSARAIVYNVSASGSGLDLYEAMDLAEAGDTVSLADGTYDGAIVSTRDGTKDNPITVVGGADAIINGEFGDRSVHITHSFMTLKGFSVQGKIGPSNSTE-DYVEKCVYVEGTGGVNSSSPLDGFVMEGLSIENCGGECVRLKDYVVNANITGNTIQNCGIYDYEFPSDEKNGEGVYIGTSSNQWTYGPDACDNNVVKANNISTSGNECVDIKEGATGNIIEDNVCSNQLDANSGCYDSRGDGNTFRYNVGSDCVGAGVRLGGWEIDGHQYGVNNSVYGNRFLAVGFGAIKILVAGQGDICGNSCEDGSCGLTG 1005
SLP L S LL+ + PSARA+ Y+ SA G G DLYEAMDLA+AGDTV+L DGTYD A+VS RDG +PITV GG AII G + RSV ITHSF+TLKGF+V+GKIG S++ E +V KCVYVEG G SS+ LDGFVME + ++NCGGECVRLKD V+NA + GNTI NCG++DY F S +KNGEGVYIGTSS QWT G D C++N+V N ISTSGNECVDIKEGA+GN+IEDN+CS QLDA SGCYDSRGDGNTFRYNVG+DC+GAGVRLGGWE+DGHQYGV NSVYGN F AVG GA+K+LV QGDICGN+CEDGSC L G
Sbjct: 14 SLPVSPLLRSALLLXXXXILSPSARAVTYDASADGDGFDLYEAMDLAQAGDTVNLQDGTYDSALVSVRDGEFGSPITVSGGPGAIIKGSYSSRSVLITHSFITLKGFTVEGKIGTSDTDEASWVNKCVYVEGPGS-QSSAVLDGFVMEDMIVQNCGGECVRLKDSVINAQVMGNTISNCGVHDYMFNSGDKNGEGVYIGTSSTQWTNGEDTCNDNLVSGNRISTSGNECVDIKEGASGNVIEDNICSEQLDAESGCYDSRGDGNTFRYNVGTDCMGAGVRLGGWEVDGHQYGVGNSVYGNDFNAVGEGALKVLVGEQGDICGNTCEDGSCSLVG 346
BLAST of mRNA_P-littoralis_Contig780.1.1 vs. uniprot
Match: D7FZD2_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZD2_ECTSI) HSP 1 Score: 392 bits (1007), Expect = 1.290e-128 Identity = 203/335 (60.60%), Postives = 244/335 (72.84%), Query Frame = 1
Query: 91 YNVSASGSGLDLYEAMDLAEAGDTVSLADGTYDGAIVSTRDGTKDNPITVVGGADAIINGE-FGDRSVHITHSFMTLKGFSVQGKIGPSNSTEDYVEKCVYVEGTGGVNSSSPLDGFVMEGLSIENCGGECVRLKDYVVNANITGNTIQNCGIYDYEFPSDEKNGEGVYIGTSSNQWTYGP-DACDNNVVKANNISTSGNECVDIKEGATGNIIEDNVCSNQLDANSGCYDSRGDGNTFRYNVGSDCVGAGVRLGGWEIDGHQYGVNNSVYGNRFLAVGFGAIKILVAGQGDICGNSCEDGSCGLTGNALAEIRETWDEAC-GDVGGPSTSSFID 1086
Y+V+ G G L EAMDLAEAGDTVSL DGTY+ A+ + RDG NPITVVGG AII + RSV + HSF+ LKGF+V+G+IG + + YV C+YV+G G +SS+ LDGFVME ++++NCGGECVRLKD V NA I NTI NCGI+DY F S + NG+GV IGTSS++W G D C NN+V N I TS NECVD+KEGA GN+IEDN+C NQLD NSGCY+SRG+ N FR N GSDC+GAGVRLGGWE+DG QYGV NSVY N F VGFGA+KI+V GQG ICGN+C C L G+ L + +TWD AC D STSS+ D
Sbjct: 3 YDVTVDGDGFGLAEAMDLAEAGDTVSLQDGTYEQALETVRDGESGNPITVVGGPGAIIKAQNSASRSVFVGHSFIELKGFTVEGQIGTEVTEDSYVLNCIYVQGPGS-DSSTFLDGFVMEEMAVQNCGGECVRLKDGVTNAKIFSNTITNCGIHDYMFESGDMNGQGVCIGTSSDEWPDGEEDVCTNNLVAGNVIDTSANECVDVKEGAYGNVIEDNMCYNQLDINSGCYNSRGNDNIFRNNAGSDCLGAGVRLGGWEVDGFQYGVGNSVYDNDFNDVGFGALKIMVDGQGTICGNTCAGDDCQLIGDYLDDTIDTWDHACYEDDEVTSTSSYYD 336
BLAST of mRNA_P-littoralis_Contig780.1.1 vs. uniprot
Match: A0A6H5LEX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEX7_9PHAE) HSP 1 Score: 346 bits (888), Expect = 8.480e-112 Identity = 176/267 (65.92%), Postives = 213/267 (79.78%), Query Frame = 1
Query: 7 SLPYRHQLVSLLLVLVLVLQPPSARAIVYNVSASGSGLDLYEAMDLAEAGDTVSLADGTYDGAIVSTRDGTKDNPITVVGGADAIINGEFGDRSVHITHSFMTLKGFSVQGKIGPSNSTE-DYVEKCVYVEGTGGVNSSSPLDGFVMEGLSIENCGGECVRLKDYVVNANITGNTIQNCGIYDYEFPSDEKNGEGVYIGTSSNQWTYGPDACDNNVVKANNISTSGNECVDIKEGATGNIIEDNVCSNQLDANSGCYDSRGDGNTFR 804
SLP L + LL+L+L+L PSARA+ ++ SA G G DLYEAMDLA+AGDTV+L DGTYD A+VS R G +PITV GG AII G + RSV ITHSF+TLKGF+V+GK+G S++ E +V KCVYVEG G SS+ LDGFVME + ++NCGGECVRLKD VVNA +TGNTI NCG++D+ F S +KNGEGVYIGTSS QWT G D C++N+V N ISTSGNECVDIKEGA+GN++E+N+CS+QLDA SGCYDSRGDGNTFR
Sbjct: 14 SLPVSPLLRNALLLLLLLLHSPSARAVTFDASADGDGFDLYEAMDLAQAGDTVNLQDGTYDSALVSVRGGEFGSPITVSGGPGAIIKGSYSSRSVLITHSFITLKGFTVEGKVGTSDTDEASWVNKCVYVEGPGS-QSSAVLDGFVMEDMIVQNCGGECVRLKDSVVNAQVTGNTISNCGVHDFMFNSGDKNGEGVYIGTSSTQWTNGEDTCNDNLVFGNRISTSGNECVDIKEGASGNVVENNICSDQLDAESGCYDSRGDGNTFR 279
BLAST of mRNA_P-littoralis_Contig780.1.1 vs. uniprot
Match: A0A6H5KT05_9PHAE (Beta_helix domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KT05_9PHAE) HSP 1 Score: 334 bits (856), Expect = 9.500e-109 Identity = 158/317 (49.84%), Postives = 219/317 (69.09%), Query Frame = 1
Query: 40 LLVLVLVLQPPSARAIVYNVSASGSGLDLYEAMDLAEAGDTVSLADGTYDGAIVSTRDGTKDNPITVVGGADAIINGEFGDRSVHITHSFMTLKGFSVQGKIGPSNSTEDYVEKCVYVEGTGGVNSSSPLDGFVMEGLSIENCGGECVRLKDYVVNANITGNTIQNCGIYDYEFPSDEKNGEGVYIGTSSNQWTYGPDACDNNVVKANNISTSGNECVDIKEGATGNIIEDNVCSNQLDANSGCYDSRGDGNTFRYNVGSDCVGAGVRLGGWEIDGHQYGVNNSVYGNRFLAVGFGAIKILVAGQGDICGNSCEDGS 990
+L+L+ + Q AR ++ S G + A+ A AGDTV LADGTY+ AIV+ + G NP+ + GG DA++N + V++ HS++TL+GFSV GKI + E YV+KCV+VEGT + L+GFVM+ + ++NCG ECVRLK ++V A I+ N IQ+CG+ D+ + + KNGEG+Y+GTSS QW+ GPD C++N + N I+ +GNECVDIKEG+TG I+E+N CS QLD +SGC+ SRGDGN FRYN SDC+G GVR+GGWE+DGH+YG +NS+Y N F G + QG +CGNSC+ G+
Sbjct: 1 MLLLITIRQLADART--FDASPDGVPYSIASALAEAGAGDTVVLADGTYNEAIVTVQGGESGNPLIITGGRDALVNAGDDGKVVYVQHSWVTLEGFSVDGKISDDDEAESYVDKCVFVEGTS-TSGDERLEGFVMQDVYVQNCGDECVRLKSFIVGAVISDNVIQDCGVRDFVYGNSGKNGEGIYVGTSSTQWSDGPDECNDNTITGNTITPNGNECVDIKEGSTGTIVEENTCSGQLDEDSGCFGSRGDGNVFRYNTASDCLGVGVRIGGWEVDGHKYGQDNSIYENSFTRAESGGLSFFALPQGKVCGNSCQGGA 314
BLAST of mRNA_P-littoralis_Contig780.1.1 vs. uniprot
Match: A0A6H5K1D2_9PHAE (Beta_helix domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1D2_9PHAE) HSP 1 Score: 323 bits (829), Expect = 5.330e-102 Identity = 171/345 (49.57%), Postives = 219/345 (63.48%), Query Frame = 1
Query: 82 AIVYNVSASGSGLDLYEAMDLAEAGDTVSLADGTYDGAIVSTRDGTKDNPITVVGGADAIINGEFGDRS-------VHITHSFMTLKGFSVQGKIGPSNSTEDYVEKCVYVEGTG--------GVNSSSPLDGFVMEGLSIENCGGECVRLKDYVVNANITGNTIQNCGIYDYEFPSDEKNGEGVYIGTSSNQW--------TYGPDACDNNVVKANNISTSGNECVDIKEGATGNIIEDNVCSNQLDANSGCYDSRGDGNTFRYNVGSDCVGAGVRLGGWEIDGHQYGVNNSVYGNRFLAVGFGAIKILVAGQGDICGNSCEDGSCGLTGNALAEIRETWDEAC 1047
A +Y VS G+ + L A+++A AGD VSLADGTY IV+ G + NP+ + GG AIIN GDRS V I HS++TL+GF++ G++ + E YV+KC++VEG G S L G V++GL I+NCG EC+R++++V NA I N I+NCGIYD+ F D K GE +YIGTSSNQW T GPD + N+V N + GNECVDIKEGAT N++E N C +Q DA SGCYDSRG+ NTFRYN C+GAG+RLGG IDG YGV+N VYGN FL G+IK V QG IC NSC +G CG++ EI +WD+ C
Sbjct: 32 AAMYEVSPDGNPMTLTAALEVAGAGDIVSLADGTYREPIVTMNAGVEGNPLVITGGRGAIINYFSGDRSLMWSQKVVDIRHSYVTLEGFTIDGQLDDEDVEESYVDKCIFVEGQAAPTMLTHQGQEVESALIGTVIDGLKIQNCGMECIRMRNFVTNAVIQNNDIENCGIYDFRFQFDGKIGEAIYIGTSSNQWEDGTGDRVTNGPDGSNYNLVTGNKLVPRGNECVDIKEGATMNVVEYNECEDQRDAESGCYDSRGNENTFRYNTAVQCLGAGIRLGGHTIDGFVYGVDNHVYGNEFLETEAGSIKSRVEPQGVICDNSCANGECGVSEEGDEEIEGSWDQGC 376
BLAST of mRNA_P-littoralis_Contig780.1.1 vs. uniprot
Match: D8LJ42_ECTSI (FirrV-1-B30 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ42_ECTSI) HSP 1 Score: 310 bits (794), Expect = 8.990e-95 Identity = 160/346 (46.24%), Postives = 218/346 (63.01%), Query Frame = 1
Query: 82 AIVYNVSASGSGLDLYEAMDLAEAGDTVSLADGTYDGAIVSTRDGTKDNPITVVGGADAIINGEFGDRS-------VHITHSFMTLKGFSVQGKIGPSNSTEDYVEKCVYVEGTG--------GVNSSSPLDGFVMEGLSIENCGGECVRLKDYVVNANITGNTIQNCGIYDYEFPSDEKNGEGVYIGTSSNQW--------TYGPDACDNNVVKANNISTSGNECVDIKEGATGNIIEDNVCSNQLDANSGCYDSRGDGNTFRYNVGSDCVGAGVRLGGWEIDGHQYGVNNSVYGNRFLAVGFGAIKILVAGQGDICGNSCEDGSCGLTGNAL-AEIRETWDEAC 1047
A Y VS G + L A+++A AGDT+SL DG Y +V+ + G + NP+ + GG DA++N GD+S V I HS++TL+GF++ G+I ++ + +V+KC++VEG G + L G V++ + I+NCG EC+R++++V N I N I++CGIYDY + D K GE +YIGTSSNQW T GPD C+ N+V N + GNECVDIKEGAT N++E N C +Q D SGCYDSRG+ NTFRYN +C+G G+RLGG EIDG YGV+N VYGN F G G+IK QG IC NSCEDG C ++ EI ++WD+ C
Sbjct: 78 AATYEVSPDGDPMTLAAALEVAGAGDTISLGDGIYREPLVTMKAGVEGNPLVIEGGRDAVVNYYTGDKSIMWSQKVVDIRHSWVTLRGFTIDGQIDDADHEDSFVDKCIFVEGQAAPEDVEYDGRTVETALIGTVIDSMKIQNCGMECIRMRNFVTNTVIIDNDIEDCGIYDYRYTFDGKVGEAIYIGTSSNQWADGADGRVTNGPDGCNYNLVTGNKLVPRGNECVDIKEGATMNVVEYNDCEDQRDVESGCYDSRGNENTFRYNTAENCLGGGIRLGGHEIDGITYGVDNHVYGNSFRETGDGSIKARRDPQGVICENSCEDGDCDVSEEGDDEEIEDSWDQEC 423
BLAST of mRNA_P-littoralis_Contig780.1.1 vs. uniprot
Match: UPI00036AEC55 (right-handed parallel beta-helix repeat-containing protein n=1 Tax=Hahella ganghwensis TaxID=286420 RepID=UPI00036AEC55) HSP 1 Score: 259 bits (663), Expect = 4.300e-79 Identity = 139/294 (47.28%), Postives = 182/294 (61.90%), Query Frame = 1
Query: 133 AMDLAEAGDTVSLADGTYDGAIVSTRDGTKDNPITVVGGADAIINGEFGDRSVHITHSFMTLKGFSVQGKIGPSNSTEDYVEKCVYVEGTGGVNSSSPLDGFVMEGLSIENCGGECVRLKDYVVNANITGNTIQNCGIYDYEFPSDEKNGEGVYIGTSSNQW------TYGPDACDNNVVKANNISTSGNECVDIKEGATGNIIEDNVCSNQLDANSGCYDSRGDGNTFRYNVGSDCVGAGVRLGGWEIDGHQYGVNNSVYGNRFLAVGFGAIKILVAGQGDICGNSCEDGSCG 996
A+ LA+AGD V L G Y + S R G D PI + G A+++G G R + I HS++ L+ F++ G++G N+ ED+ + VYV+G GFVM +S++N GGECVRL+ YV A I NT NCG+YD++F + KNGE +Y+GTSSNQW T GPD ++N + N T+GNECVDIKEGA N++E N+CS Q D NS +DSRGD N FRYNV D GAGVRLGG +DG QYGVNN VYGN +K++ A Q +CGN D + G
Sbjct: 62 ALSLAQAGDRVYLQPGHYYENVRSVRHGQADMPIIIHGSKSAVLHGAQG-RILEINHSYIHLRNFTIDGQVGSGNTMEDFRDILVYVKGN---EPQQGPTGFVMRAMSLKNAGGECVRLRYYVTEAEIFDNTFYNCGVYDFKFNNGGKNGEAIYVGTSSNQWDDGKNPTGGPDPSNHNWIHHNKFLTNGNECVDIKEGAEYNLVEYNICSGQQDPNSAGFDSRGDHNIFRYNVSHDNKGAGVRLGGNTVDGRQYGVNNQVYGNLLYNNAQAGVKLMAAPQEKVCGNPTSDNTEG 351
BLAST of mRNA_P-littoralis_Contig780.1.1 vs. uniprot
Match: D7FZD3_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZD3_ECTSI) HSP 1 Score: 248 bits (632), Expect = 5.370e-75 Identity = 160/306 (52.29%), Postives = 186/306 (60.78%), Query Frame = 1
Query: 7 SLPYRHQLVSLLLVLVLVLQPPSARAIVYNVSASGSGLDLYEAMDLAEAGDTVSLADGTYDGAIVSTRDGTKDNPITVVGGADAIING-----------------EFGDRS-VHITHSFMTL-KGFSVQGKIGPSNSTED--YVEKCVYVEGTGGVNSSSPLDGFVMEGLSIENCGGECVRLKDYVVNANITGNTIQNCGIYDYEFPS----DEKNGEGVYIGTSS---------------NQWTYGPDACDNNVVKANNISTSGNECVDIKEGATGNIIEDNVCSNQLDANSGCYDSRGDGNTFR 804
SLP L S LL+ + PSA A+ YNVSA G G+DLYEAMDLAEAGDTV+L +GTYD A+VS RDG +PITV GGA G E G+ S V + S L KGFSV+GKIG SN T+ +V KCVYVEG G NSS+ LDGFVME + ++NCGGECVRLKD VVNA +TGNTI + EK SS +WT G D C+ NVV N ISTSGNECVDIKEG++GN+IEDN S+QL+A SGCYDSRGDGNTFR
Sbjct: 14 SLPVPRLLRSALLLXXXXVLSPSAFAVTYNVSADGDGIDLYEAMDLAEAGDTVNLQNGTYDSALVSVRDGEFGSPITVAGGAGGHHQGVLQQPLRVHHAQLHHAQEAGNCSTVQLPCSCQKLPKGFSVEGKIG-SNDTDQASWVNKCVYVEGPG-ANSSAVLDGFVMEDMVVQNCGGECVRLKDSVVNAQVTGNTISRTAASTTTCSTRRTRTEKGSTSALPAPSSAAHRIRYPPVTKKEAQEWTNGEDTCNGNVVSRNLISTSGNECVDIKEGSSGNVIEDNFRSDQLNAESGCYDSRGDGNTFR 317
BLAST of mRNA_P-littoralis_Contig780.1.1 vs. uniprot
Match: A0A261GHV7_9GAMM (DUF1565 domain-containing protein n=1 Tax=Hahella sp. CCB-MM4 TaxID=1926491 RepID=A0A261GHV7_9GAMM) HSP 1 Score: 247 bits (630), Expect = 4.760e-74 Identity = 136/312 (43.59%), Postives = 181/312 (58.01%), Query Frame = 1
Query: 133 AMDLAEAGDTVSLADGTYDGAIVSTRDGTKDNPITVVGGADAIINGEFGDRSVHITHSFMTLKGFSVQGKIGPSNSTEDYVEKCVYVEGTGGVNSSSPLDGFVMEGLSIENCGGECVRLKDYVVNANITGNTIQNCGIYDYEFPSDEKNGEGVYIGTSSNQWTYG------PDACDNNVVKANNISTSGNECVDIKEGATGNIIEDNVCSNQLDANSGCYDSRGDGNTFRYNVGSDCVGAGVRLGGWEIDGHQYGVNNSVYGNRFLAVGFGAIKILVAGQGDICGNSCEDGSCGLTGNALAEIRETWDEACG 1050
A++ A+ GD V L +G Y + + R G + PI + G A++ GE G R + I H ++ L+ F++ G +G N EDY + ++V+GT + P +GFVM + I N GGECVRL+ +V A I GNT NCG YD++F KNGE +YIGTSS QW G PD + N V N T GNECVDIKEGA N++E+N+C+ Q D SG +D+RGD N RYNV GAG+R+GG ++G QYGV N VYGN+ IKI+ Q +CGNS D S GN E +D A G
Sbjct: 67 ALEYAQPGDRVYLLEGKYYQDVKTVRSGLRSKPILIQGTKSAVLKGENGGRVLQINHDYIHLRNFTIDGLVGKGNGPEDYRKSLIFVQGT--EHKQGP-EGFVMRSMRIRNAGGECVRLRYHVTRAEIFGNTFYNCGAYDFQFDGRGKNGEAIYIGTSSEQWDDGKNPSADPDHSNYNWVHHNYFLTRGNECVDIKEGAAHNLVENNICAGQQDPASGGFDARGDYNIIRYNVSYSNKGAGIRVGGNMVNGRQYGVFNEVYGNKIFDNDNSGIKIMTYPQRYVCGNSMTDNS---KGNITGESATFYDPATG 372 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig780.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig780.1.1 >prot_P-littoralis_Contig780.1.1 ID=prot_P-littoralis_Contig780.1.1|Name=mRNA_P-littoralis_Contig780.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=477bp MISLPYRHQLVSLLLVLVLVLQPPSARAIVYNVSASGSGLDLYEAMDLAEback to top mRNA from alignment at P-littoralis_Contig780:5578..10738- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig780.1.1 ID=mRNA_P-littoralis_Contig780.1.1|Name=mRNA_P-littoralis_Contig780.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5161bp|location=Sequence derived from alignment at P-littoralis_Contig780:5578..10738- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig780:5578..10738- >mRNA_P-littoralis_Contig780.1.1 ID=mRNA_P-littoralis_Contig780.1.1|Name=mRNA_P-littoralis_Contig780.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1431bp|location=Sequence derived from alignment at P-littoralis_Contig780:5578..10738- (Pylaiella littoralis U1_48)back to top |