prot_P-littoralis_Contig78.133.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig78.133.1
Unique Nameprot_P-littoralis_Contig78.133.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length129
Homology
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BLAST of mRNA_P-littoralis_Contig78.133.1 vs. uniprot
Match: A0A6H5L5G4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5G4_9PHAE)

HSP 1 Score: 50.8 bits (120), Expect = 9.920e-5
Identity = 25/71 (35.21%), Postives = 41/71 (57.75%), Query Frame = 0 
Query:   30 GPDNVTHQIKGRGDIAVDLKSDVGSMLMAVKNAAYVPTFAYNLLSMSQCVRQGYKFETDDPGMLVTKKSTG 100
            G D     + G GD+ + L+++ G + + V NAA+VP F YNLLS+S    +G+ +     G+ +T K+ G
Sbjct:   22 GGDKAPVPLLGYGDVTLVLQTEDGGVPVPVLNAAHVPKFPYNLLSLSSLAEEGHTYSGMKGGLTLTTKAGG 92
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig78.133.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L5G4_9PHAE9.920e-535.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig78contigP-littoralis_Contig78:622519..622905 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig78.133.1mRNA_P-littoralis_Contig78.133.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig78 622519..622905 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig78.133.1 ID=prot_P-littoralis_Contig78.133.1|Name=mRNA_P-littoralis_Contig78.133.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=129bp
WHIDSGASGTVTRSSRMMTNFRPCNKLVAGPDNVTHQIKGRGDIAVDLKS
DVGSMLMAVKNAAYVPTFAYNLLSMSQCVRQGYKFETDDPGMLVTKKSTG
EHLLMRPDNDLYVSYGRRVDGEVETACAV
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