prot_P-littoralis_Contig78.126.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig78.126.1
Unique Nameprot_P-littoralis_Contig78.126.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length669
Homology
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BLAST of mRNA_P-littoralis_Contig78.126.1 vs. uniprot
Match: D7FWV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWV4_ECTSI)

HSP 1 Score: 266 bits (681), Expect = 2.370e-80
Identity = 172/295 (58.31%), Postives = 193/295 (65.42%), Query Frame = 0 
Query:    7 QQQLKRRRCRDAD-DFSTSESPPGMKHRNLNAASASPTLPRSVTLATAISPFAAPASSSAXXXXXXHETXXXXXXXXXXXXXXXXXXAGLSLLDVSVLVASGGWLDLSSGKHLQEASGTLCRDCREYVGSHLRVDYSTPRVLWPLRTAGGVIFGRSDRSGKE---------EADGGTG-----------ERVGGAC--RGSAESGSSGKGSWLIS---QQNGFGGCRKGRSIPPMRVTMMTWERPLSDLAHGRALPPGLQSLYFACSFRYFDVDWVSFPPSLLSLSFGQNFDQAI 275
            +QQL RRR RDA  + S S +PPGM+HR++N   A P  P     A A+   A+PA+++                  XXXXXXXX   G SLLDVS LVASGGWLDL+SGKHLQEASGTLCRDCREYVGSHLRVDYSTPR LWPLRT G V+FG+    G            A GG G           E  GG     G++ S S GKG  L S   QQ G+    KGRSIPP+RVT MTWERPLSDLAHGRALPPGL SL+FACSFRYFDV WVSFP SLLSLSFGQNFDQ++
Sbjct:    5 EQQLNRRRHRDAGGNTSPSRTPPGMRHRSVNVVPALPASPPPSRGAAAVGAAASPATAADPEP----SVLAPGSPATXXXXXXXXAGTGPSLLDVSFLVASGGWLDLASGKHLQEASGTLCRDCREYVGSHLRVDYSTPRALWPLRTVGVVLFGKGPGGGGRVHGIGNSAAAASGGVGVRRLAGGFIGKENAGGTGYRTGASSSASGGKGGLLSSRLQQQYGW----KGRSIPPLRVTTMTWERPLSDLAHGRALPPGLHSLHFACSFRYFDVGWVSFPTSLLSLSFGQNFDQSV 291
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BLAST of mRNA_P-littoralis_Contig78.126.1 vs. uniprot
Match: A0A6H5KHB9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHB9_9PHAE)

HSP 1 Score: 256 bits (653), Expect = 3.300e-72
Identity = 142/213 (66.67%), Postives = 150/213 (70.42%), Query Frame = 0 
Query:   93 AGLSLLDVSVLVASGGWLDLSSGKHLQEASGTLCRDCREYVGSHLRVDYSTPRVLWPLRTAGGVIFGRSDR----------------------------SGKEEADGGTGERVGGACRGSAESGSSGKGSWLISQQNGFGGCRKGRSIPPMRVTMMTWERPLSDLAHGRALPPGLQSLYFACSFRYFDVDWVSFPPSLLSLSFGQNFDQAIDS 277
            AG SLLDVS LVASGGWLDL+SGKHLQEASGTLCRDCREYVGSHLRVDYSTPR LWPLRTAG V+FGR                               +GKE A GGTG R GG+   SA  G  G   W + QQ   G   KG+SIPP+RVT MTWERPLSDLAHGRALPPGL SL+ ACSFRYFDV WVSFP SLLSLSFGQNFDQ IDS
Sbjct:   68 AGPSLLDVSFLVASGGWLDLASGKHLQEASGTLCRDCREYVGSHLRVDYSTPRALWPLRTAGVVLFGRGPGGGGRMLSIGNSVATASGGVGVRRLAAGFNGKENA-GGTGYRTGGSS--SASGGKGGLLPWRLQQQQQHGW--KGQSIPPLRVTTMTWERPLSDLAHGRALPPGLHSLHLACSFRYFDVGWVSFPTSLLSLSFGQNFDQGIDS 275
[Close]
BLAST of mRNA_P-littoralis_Contig78.126.1 vs. uniprot
Match: D7FWV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWV5_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 8.850e-16
Identity = 40/43 (93.02%), Postives = 41/43 (95.35%), Query Frame = 0 
Query:  625 FDPSSLNGLVWPEGLKAIKLGRVSRAVNDDRRIHPWRAWDEVE 667
            FDPSSLNGLVWPEGLKAI+LGRVSRAVNDDRRIHPW AWDE E
Sbjct:  366 FDPSSLNGLVWPEGLKAIQLGRVSRAVNDDRRIHPWGAWDEPE 408
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig78.126.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FWV4_ECTSI2.370e-8058.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KHB9_9PHAE3.300e-7266.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWV5_ECTSI8.850e-1693.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008615FNIPPFAMPF05725FNIPcoord: 447..488
e-value: 5.7E-7
score: 29.6
coord: 581..622
e-value: 7.3E-6
score: 26.1
coord: 293..334
e-value: 6.5E-5
score: 23.0
coord: 491..533
e-value: 7.1E-7
score: 29.3
coord: 339..379
e-value: 1.1E-5
score: 25.5
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 368..644
e-value: 3.3E-6
score: 27.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 161..183
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 489..644
NoneNo IPR availablePANTHERPTHR32134:SF156SUBFAMILY NOT NAMEDcoord: 489..644
coord: 336..486
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 336..486
coord: 391..532
coord: 258..386
NoneNo IPR availablePANTHERPTHR32134:SF156SUBFAMILY NOT NAMEDcoord: 258..386
NoneNo IPR availablePANTHERPTHR32134:SF156SUBFAMILY NOT NAMEDcoord: 391..532
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 236..585

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig78contigP-littoralis_Contig78:560935..573020 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig78.126.1mRNA_P-littoralis_Contig78.126.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig78 560916..575395 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig78.126.1 ID=prot_P-littoralis_Contig78.126.1|Name=mRNA_P-littoralis_Contig78.126.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=669bp
MQRYQEQQQLKRRRCRDADDFSTSESPPGMKHRNLNAASASPTLPRSVTL
ATAISPFAAPASSSAAAATPAHETAPVATAAAAAAAASASSAAGLSLLDV
SVLVASGGWLDLSSGKHLQEASGTLCRDCREYVGSHLRVDYSTPRVLWPL
RTAGGVIFGRSDRSGKEEADGGTGERVGGACRGSAESGSSGKGSWLISQQ
NGFGGCRKGRSIPPMRVTMMTWERPLSDLAHGRALPPGLQSLYFACSFRY
FDVDWVSFPPSLLSLSFGQNFDQAIDSIAWPPCLQTLTFGWEFNQSVNGV
QWPPGLRTLTFGQSFDQPIESVSWPLGLEDLTFGGRFFQPIHRVAFPPGL
RRLTFGWRFNHPITEVVWPSSLQRLMFGSLFNQPVDGVKWPKGLEQLLFG
RVFNQQIQRTVWASGLRLLALGDFFDQALTGVAWPQNLEFLSLGNKFNQA
VDGVAFPSRLEQLAFGWRFDQPITAVVWPRNLKYLTFHGGFNHPITDVVW
PQDLKQLQLGRNFDQPIREVTFPKGLLRLDLGDNFNRAVDGVEWPPDLQS
LTFGQAFNQRIDTEGTVWPIRLKRLTFGGSFNQPVKGAAWPTTLQEITFG
REFNQPVSEASWPRGLKKLAFGHRFDPSSLNGLVWPEGLKAIKLGRVSRA
VNDDRRIHPWRAWDEVEI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP
IPR032675LRR_dom_sf