prot_P-littoralis_Contig78.77.2 (polypeptide) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig78.77.2 vs. uniprot
Match: D8LT06_ECTSI (RRM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT06_ECTSI) HSP 1 Score: 247 bits (631), Expect = 3.560e-79 Identity = 134/169 (79.29%), Postives = 140/169 (82.84%), Query Frame = 0
Query: 51 EVEAPPDVEGIPNETLFVGNLSYRVSEAVIIKLFTPFGKVVREQFCYHMVGPRRGEPRGFCFVEYSNCEDAAKAIRALHGRKLYGRPLRVRFMTVEGRGRMDYST-DSK-SGGSSSSFIANSDGGKIPPPAGXXXXXXXXXXVTKLALDKKVALLKLKLREAQQQSGTR 217
EV PPDVEGIPNETLFVGNLSYRVSEAVIIKLFTPFGKVVREQFCYH VGPR GEPRGFCFVEYSN +DAAKAIRALHGRKLYGRPLRVRFMTVEG+GRMDYST DSK S +S SF DG KIPP G VTKL+LDKKVALLKLKLREAQ+ +G R
Sbjct: 113 EVAPPPDVEGIPNETLFVGNLSYRVSEAVIIKLFTPFGKVVREQFCYHKVGPRLGEPRGFCFVEYSNVDDAAKAIRALHGRKLYGRPLRVRFMTVEGKGRMDYSTTDSKGSTATSGSFGTYGDGAKIPPTPGAGGEAGAAAGVTKLSLDKKVALLKLKLREAQKAAGKR 281
BLAST of mRNA_P-littoralis_Contig78.77.2 vs. uniprot
Match: A0A169WBX9_DAUCS (RRM domain-containing protein n=3 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A169WBX9_DAUCS) HSP 1 Score: 100 bits (250), Expect = 4.800e-23 Identity = 50/114 (43.86%), Postives = 75/114 (65.79%), Query Frame = 0
Query: 53 EAPPDVEGIPNET-LFVGNLSYRVSEAVIIKLFTPFGKVVREQFCYHMVGPRRGEPRGFCFVEYSNCEDAAKAIRALHGRKLYGRPLRVRFMT----VEGRGRMDYSTDSKSGG 161
+ P ++ G E+ L++GNL +R++EA +IK+F+PFG +V E F +H GP+RGEPRG+ FV+Y E+A A +HG+ +YGRPL VR + V+G G D + D+K G
Sbjct: 31 QEPNNIMGDKYESRLYIGNLDFRITEAALIKMFSPFGTIVSEDFLWHTRGPKRGEPRGYAFVQYRTVEEAKLAKEKVHGKLVYGRPLVVRLASEKDLVDGAGSSDKAIDAKKPG 144
BLAST of mRNA_P-littoralis_Contig78.77.2 vs. uniprot
Match: UPI001FB14565 (probable RNA-binding protein 18 n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB14565) HSP 1 Score: 98.6 bits (244), Expect = 2.360e-22 Identity = 47/110 (42.73%), Postives = 74/110 (67.27%), Query Frame = 0
Query: 66 LFVGNLSYRVSEAVIIKLFTPFGKVVREQFCYHMVGPRRGEPRGFCFVEYSNCEDAAKAIRALHGRKLYGRPLRVRFMTVEGRGRMDYSTDSKSGGSSSSFIANSDGGKI 175
L++GNL Y++SEA +IK+F+PFGK+V E F H GP+RGEPRGF F+++SN E+A A ++GR + GRPL VR + + + M +++ + G + S + S G++
Sbjct: 15 LYIGNLDYKISEATLIKMFSPFGKIVAEDFLLHTRGPKRGEPRGFAFIQFSNREEAKLAKVKMNGRLVCGRPLIVRLESEKHQAEMTHNSGAVFGCENGSGLGGSSSGQV 124
BLAST of mRNA_P-littoralis_Contig78.77.2 vs. uniprot
Match: A0A176VG38_MARPO (RRM domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VG38_MARPO) HSP 1 Score: 98.6 bits (244), Expect = 3.440e-22 Identity = 48/91 (52.75%), Postives = 66/91 (72.53%), Query Frame = 0
Query: 57 DVEGIPNET----LFVGNLSYRVSEAVIIKLFTPFGKVVREQFCYHMVGPRRGEPRGFCFVEYSNCEDAAKAIRALHGRKLYGRPLRVRFM 143
D EG+ E L++GNL +RV+E +IKLF+PFGK+ E++ +H GP+RGEPRGF FVEYS EDA +A +++GR +GRPL VRF+
Sbjct: 9 DKEGLGGEKREHKLYIGNLDHRVTEYHVIKLFSPFGKIRCEEYMWHTHGPKRGEPRGFAFVEYSKREDAERAKASMNGRLAFGRPLVVRFV 99
BLAST of mRNA_P-littoralis_Contig78.77.2 vs. uniprot
Match: A0A2G5E0G3_AQUCA (RRM domain-containing protein n=2 Tax=Thalictroideae TaxID=1463137 RepID=A0A2G5E0G3_AQUCA) HSP 1 Score: 97.8 bits (242), Expect = 3.600e-22 Identity = 50/116 (43.10%), Postives = 74/116 (63.79%), Query Frame = 0
Query: 58 VEGIPNETLFVGNLSYRVSEAVIIKLFTPFGKVVREQFCYHMVGPRRGEPRGFCFVEYSNCEDAAKAIRALHGRKLYGRPLRVRFMTVEGRGRMDYSTDSKSG-GSSSSFIANSDG 172
V+ + L++GNL R++EAV+IK+F+PFGK+V E F +H GP+RGEPRGF F++++ E+A A +HG+ GRPL VRF + + + G G+ SSF+ NS G
Sbjct: 7 VDDKSDRRLYIGNLDQRITEAVLIKMFSPFGKIVSEDFLWHTRGPKRGEPRGFAFIQFNTKEEAELAKEKMHGKFACGRPLVVRFACEKYLVESEANPSKTIGEGNKSSFVGNSSG 122
BLAST of mRNA_P-littoralis_Contig78.77.2 vs. uniprot
Match: A0A565CPV0_9BRAS (RRM domain-containing protein n=1 Tax=Arabis nemorensis TaxID=586526 RepID=A0A565CPV0_9BRAS) HSP 1 Score: 97.4 bits (241), Expect = 5.060e-22 Identity = 44/91 (48.35%), Postives = 63/91 (69.23%), Query Frame = 0
Query: 56 PDVEGIPNET----LFVGNLSYRVSEAVIIKLFTPFGKVVREQFCYHMVGPRRGEPRGFCFVEYSNCEDAAKAIRALHGRKLYGRPLRVRF 142
PD G +E L+VGNL R++EA ++K+F+P+GK++ E F +H GP++GEPRG+ FV+YS E+A A+ +HGR GRPL VRF
Sbjct: 2 PDTGGFVDEKNESRLYVGNLDLRINEAALLKMFSPYGKIISEDFLWHTRGPKKGEPRGYAFVQYSRKEEAEVAVEKMHGRLACGRPLVVRF 92
BLAST of mRNA_P-littoralis_Contig78.77.2 vs. uniprot
Match: A0A803MKS2_CHEQI (RRM domain-containing protein n=4 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803MKS2_CHEQI) HSP 1 Score: 97.4 bits (241), Expect = 6.730e-22 Identity = 46/90 (51.11%), Postives = 62/90 (68.89%), Query Frame = 0
Query: 57 DVEGIPNET----LFVGNLSYRVSEAVIIKLFTPFGKVVREQFCYHMVGPRRGEPRGFCFVEYSNCEDAAKAIRALHGRKLYGRPLRVRF 142
D+ G+ NET ++VGN+ +R+SEA ++K+F+PFGK+ E F H GP+RGEPRGF FV+YS E+A A +HGR GRPL VR
Sbjct: 12 DLNGMSNETSDRRIYVGNIDHRISEATLLKMFSPFGKIESEDFLLHTRGPKRGEPRGFAFVQYSTKEEARLAKEKMHGRLACGRPLVVRL 101
BLAST of mRNA_P-littoralis_Contig78.77.2 vs. uniprot
Match: A0A2G5DIJ7_AQUCA (RRM domain-containing protein n=1 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5DIJ7_AQUCA) HSP 1 Score: 97.8 bits (242), Expect = 1.030e-21 Identity = 50/116 (43.10%), Postives = 74/116 (63.79%), Query Frame = 0
Query: 58 VEGIPNETLFVGNLSYRVSEAVIIKLFTPFGKVVREQFCYHMVGPRRGEPRGFCFVEYSNCEDAAKAIRALHGRKLYGRPLRVRFMTVEGRGRMDYSTDSKSG-GSSSSFIANSDG 172
V+ + L++GNL R++EAV+IK+F+PFGK+V E F +H GP+RGEPRGF F++++ E+A A +HG+ GRPL VRF + + + G G+ SSF+ NS G
Sbjct: 56 VDDKSDRRLYIGNLDQRITEAVLIKMFSPFGKIVSEDFLWHTRGPKRGEPRGFAFIQFNTKEEAELAKEKMHGKFACGRPLVVRFACEKYLVESEANPSKTIGEGNKSSFVGNSSG 171
BLAST of mRNA_P-littoralis_Contig78.77.2 vs. uniprot
Match: UPI000B8CF78D (probable RNA-binding protein 18 n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8CF78D) HSP 1 Score: 95.1 bits (235), Expect = 3.540e-21 Identity = 55/153 (35.95%), Postives = 86/153 (56.21%), Query Frame = 0
Query: 66 LFVGNLSYRVSEAVIIKLFTPFGKVVREQFCYHMVGPRRGEPRGFCFVEYSNCEDAAKAIRALHGRKLYGRPLRVRFMTVE--GRGRMDYSTDSKSGGSSSSFIANSDGGKIPPPAGXXXXXXXXXXVTKLALDKKVALLKLKLREAQQQSGT 216
L+VGNL RV+EA +IK+F+P+GK+V E F +H GP+RGEPRGF F++YS E+A A +HGR GRPL VR + + + D S + + +S + +S G +++ K+A +K KL+ +++SG+
Sbjct: 15 LYVGNLDLRVTEAALIKMFSPYGKIVSEDFLWHTRGPKRGEPRGFAFIQYSTKEEAKLAKEKMHGRLACGRPLVVRIASEKYLEQAAQDPSKATTGDTNKTSLVGSSSG--------------------QMSRSAKIAAIKSKLKSLEEESGS 147
BLAST of mRNA_P-littoralis_Contig78.77.2 vs. uniprot
Match: UPI000CECE4CA (probable RNA-binding protein 18 isoform X1 n=2 Tax=Morus notabilis TaxID=981085 RepID=UPI000CECE4CA) HSP 1 Score: 95.1 bits (235), Expect = 3.730e-21 Identity = 43/77 (55.84%), Postives = 56/77 (72.73%), Query Frame = 0
Query: 66 LFVGNLSYRVSEAVIIKLFTPFGKVVREQFCYHMVGPRRGEPRGFCFVEYSNCEDAAKAIRALHGRKLYGRPLRVRF 142
L++GNL R++EA +IK+F+PFGK+V E F +H GP+RGEPRGF FV+YS E+A A +HGR GRPL VR
Sbjct: 15 LYIGNLDLRITEAALIKMFSPFGKIVSEDFLWHTRGPKRGEPRGFAFVQYSTKEEARLAKEKMHGRLACGRPLVVRL 91 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig78.77.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-littoralis_Contig78.77.2 ID=prot_P-littoralis_Contig78.77.2|Name=mRNA_P-littoralis_Contig78.77.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=218bpback to top |