mRNA_P-littoralis_Contig78.77.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig78.77.2
Unique NamemRNA_P-littoralis_Contig78.77.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig78.77.2 vs. uniprot
Match: D8LT06_ECTSI (RRM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT06_ECTSI)

HSP 1 Score: 247 bits (630), Expect = 1.730e-71
Identity = 134/169 (79.29%), Postives = 140/169 (82.84%), Query Frame = 1 
Query:  202 EVEAPPDVEGIPNETLFVGNLSYRVSEAVIIKLFTPFGKVVREQFCYHMVGPRRGEPRGFCFVEYSNCEDAAKAIRALHGRKLYGRPLRVRFMTVEGRGRMDYST-DSK-SGGSSSSFIANSDGGKIPPPAGXXXXXXXXXXVTKLALDKKVALLKLKLREAQQQSGTR 702
            EV  PPDVEGIPNETLFVGNLSYRVSEAVIIKLFTPFGKVVREQFCYH VGPR GEPRGFCFVEYSN +DAAKAIRALHGRKLYGRPLRVRFMTVEG+GRMDYST DSK S  +S SF    DG KIPP  G          VTKL+LDKKVALLKLKLREAQ+ +G R
Sbjct:  113 EVAPPPDVEGIPNETLFVGNLSYRVSEAVIIKLFTPFGKVVREQFCYHKVGPRLGEPRGFCFVEYSNVDDAAKAIRALHGRKLYGRPLRVRFMTVEGKGRMDYSTTDSKGSTATSGSFGTYGDGAKIPPTPGAGGEAGAAAGVTKLSLDKKVALLKLKLREAQKAAGKR 281
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BLAST of mRNA_P-littoralis_Contig78.77.2 vs. uniprot
Match: A0A169WBX9_DAUCS (RRM domain-containing protein n=3 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A169WBX9_DAUCS)

HSP 1 Score: 100 bits (250), Expect = 1.070e-20
Identity = 50/114 (43.86%), Postives = 75/114 (65.79%), Query Frame = 1 
Query:  208 EAPPDVEGIPNET-LFVGNLSYRVSEAVIIKLFTPFGKVVREQFCYHMVGPRRGEPRGFCFVEYSNCEDAAKAIRALHGRKLYGRPLRVRFMT----VEGRGRMDYSTDSKSGG 534
            + P ++ G   E+ L++GNL +R++EA +IK+F+PFG +V E F +H  GP+RGEPRG+ FV+Y   E+A  A   +HG+ +YGRPL VR  +    V+G G  D + D+K  G
Sbjct:   31 QEPNNIMGDKYESRLYIGNLDFRITEAALIKMFSPFGTIVSEDFLWHTRGPKRGEPRGYAFVQYRTVEEAKLAKEKVHGKLVYGRPLVVRLASEKDLVDGAGSSDKAIDAKKPG 144
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BLAST of mRNA_P-littoralis_Contig78.77.2 vs. uniprot
Match: UPI001FB14565 (probable RNA-binding protein 18 n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB14565)

HSP 1 Score: 98.6 bits (244), Expect = 4.230e-20
Identity = 47/110 (42.73%), Postives = 74/110 (67.27%), Query Frame = 1 
Query:  247 LFVGNLSYRVSEAVIIKLFTPFGKVVREQFCYHMVGPRRGEPRGFCFVEYSNCEDAAKAIRALHGRKLYGRPLRVRFMTVEGRGRMDYSTDSKSGGSSSSFIANSDGGKI 576
            L++GNL Y++SEA +IK+F+PFGK+V E F  H  GP+RGEPRGF F+++SN E+A  A   ++GR + GRPL VR  + + +  M +++ +  G  + S +  S  G++
Sbjct:   15 LYIGNLDYKISEATLIKMFSPFGKIVAEDFLLHTRGPKRGEPRGFAFIQFSNREEAKLAKVKMNGRLVCGRPLIVRLESEKHQAEMTHNSGAVFGCENGSGLGGSSSGQV 124
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BLAST of mRNA_P-littoralis_Contig78.77.2 vs. uniprot
Match: A0A2G5E0G3_AQUCA (RRM domain-containing protein n=2 Tax=Thalictroideae TaxID=1463137 RepID=A0A2G5E0G3_AQUCA)

HSP 1 Score: 97.8 bits (242), Expect = 5.970e-20
Identity = 50/116 (43.10%), Postives = 74/116 (63.79%), Query Frame = 1 
Query:  223 VEGIPNETLFVGNLSYRVSEAVIIKLFTPFGKVVREQFCYHMVGPRRGEPRGFCFVEYSNCEDAAKAIRALHGRKLYGRPLRVRFMTVEGRGRMDYSTDSKSG-GSSSSFIANSDG 567
            V+   +  L++GNL  R++EAV+IK+F+PFGK+V E F +H  GP+RGEPRGF F++++  E+A  A   +HG+   GRPL VRF   +     + +     G G+ SSF+ NS G
Sbjct:    7 VDDKSDRRLYIGNLDQRITEAVLIKMFSPFGKIVSEDFLWHTRGPKRGEPRGFAFIQFNTKEEAELAKEKMHGKFACGRPLVVRFACEKYLVESEANPSKTIGEGNKSSFVGNSSG 122
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BLAST of mRNA_P-littoralis_Contig78.77.2 vs. uniprot
Match: A0A176VG38_MARPO (RRM domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VG38_MARPO)

HSP 1 Score: 98.6 bits (244), Expect = 6.310e-20
Identity = 48/91 (52.75%), Postives = 66/91 (72.53%), Query Frame = 1 
Query:  220 DVEGIPNET----LFVGNLSYRVSEAVIIKLFTPFGKVVREQFCYHMVGPRRGEPRGFCFVEYSNCEDAAKAIRALHGRKLYGRPLRVRFM 480
            D EG+  E     L++GNL +RV+E  +IKLF+PFGK+  E++ +H  GP+RGEPRGF FVEYS  EDA +A  +++GR  +GRPL VRF+
Sbjct:    9 DKEGLGGEKREHKLYIGNLDHRVTEYHVIKLFSPFGKIRCEEYMWHTHGPKRGEPRGFAFVEYSKREDAERAKASMNGRLAFGRPLVVRFV 99
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BLAST of mRNA_P-littoralis_Contig78.77.2 vs. uniprot
Match: A0A565CPV0_9BRAS (RRM domain-containing protein n=1 Tax=Arabis nemorensis TaxID=586526 RepID=A0A565CPV0_9BRAS)

HSP 1 Score: 97.4 bits (241), Expect = 8.140e-20
Identity = 44/91 (48.35%), Postives = 63/91 (69.23%), Query Frame = 1 
Query:  217 PDVEGIPNET----LFVGNLSYRVSEAVIIKLFTPFGKVVREQFCYHMVGPRRGEPRGFCFVEYSNCEDAAKAIRALHGRKLYGRPLRVRF 477
            PD  G  +E     L+VGNL  R++EA ++K+F+P+GK++ E F +H  GP++GEPRG+ FV+YS  E+A  A+  +HGR   GRPL VRF
Sbjct:    2 PDTGGFVDEKNESRLYVGNLDLRINEAALLKMFSPYGKIISEDFLWHTRGPKKGEPRGYAFVQYSRKEEAEVAVEKMHGRLACGRPLVVRF 92
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BLAST of mRNA_P-littoralis_Contig78.77.2 vs. uniprot
Match: A0A803MKS2_CHEQI (RRM domain-containing protein n=4 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803MKS2_CHEQI)

HSP 1 Score: 97.4 bits (241), Expect = 1.100e-19
Identity = 46/90 (51.11%), Postives = 62/90 (68.89%), Query Frame = 1 
Query:  220 DVEGIPNET----LFVGNLSYRVSEAVIIKLFTPFGKVVREQFCYHMVGPRRGEPRGFCFVEYSNCEDAAKAIRALHGRKLYGRPLRVRF 477
            D+ G+ NET    ++VGN+ +R+SEA ++K+F+PFGK+  E F  H  GP+RGEPRGF FV+YS  E+A  A   +HGR   GRPL VR 
Sbjct:   12 DLNGMSNETSDRRIYVGNIDHRISEATLLKMFSPFGKIESEDFLLHTRGPKRGEPRGFAFVQYSTKEEARLAKEKMHGRLACGRPLVVRL 101
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BLAST of mRNA_P-littoralis_Contig78.77.2 vs. uniprot
Match: A0A2G5DIJ7_AQUCA (RRM domain-containing protein n=1 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5DIJ7_AQUCA)

HSP 1 Score: 97.8 bits (242), Expect = 1.810e-19
Identity = 50/116 (43.10%), Postives = 74/116 (63.79%), Query Frame = 1 
Query:  223 VEGIPNETLFVGNLSYRVSEAVIIKLFTPFGKVVREQFCYHMVGPRRGEPRGFCFVEYSNCEDAAKAIRALHGRKLYGRPLRVRFMTVEGRGRMDYSTDSKSG-GSSSSFIANSDG 567
            V+   +  L++GNL  R++EAV+IK+F+PFGK+V E F +H  GP+RGEPRGF F++++  E+A  A   +HG+   GRPL VRF   +     + +     G G+ SSF+ NS G
Sbjct:   56 VDDKSDRRLYIGNLDQRITEAVLIKMFSPFGKIVSEDFLWHTRGPKRGEPRGFAFIQFNTKEEAELAKEKMHGKFACGRPLVVRFACEKYLVESEANPSKTIGEGNKSSFVGNSSG 171
[Close]
BLAST of mRNA_P-littoralis_Contig78.77.2 vs. uniprot
Match: UPI000CECE4CA (probable RNA-binding protein 18 isoform X1 n=2 Tax=Morus notabilis TaxID=981085 RepID=UPI000CECE4CA)

HSP 1 Score: 95.1 bits (235), Expect = 4.930e-19
Identity = 43/77 (55.84%), Postives = 56/77 (72.73%), Query Frame = 1 
Query:  247 LFVGNLSYRVSEAVIIKLFTPFGKVVREQFCYHMVGPRRGEPRGFCFVEYSNCEDAAKAIRALHGRKLYGRPLRVRF 477
            L++GNL  R++EA +IK+F+PFGK+V E F +H  GP+RGEPRGF FV+YS  E+A  A   +HGR   GRPL VR 
Sbjct:   15 LYIGNLDLRITEAALIKMFSPFGKIVSEDFLWHTRGPKRGEPRGFAFVQYSTKEEARLAKEKMHGRLACGRPLVVRL 91
[Close]
BLAST of mRNA_P-littoralis_Contig78.77.2 vs. uniprot
Match: A0A833QJ63_9POAL (Putative RNA-binding protein 18 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833QJ63_9POAL)

HSP 1 Score: 95.1 bits (235), Expect = 5.960e-19
Identity = 55/119 (46.22%), Postives = 74/119 (62.18%), Query Frame = 1 
Query:  223 VEGIPNETLFVGNLSYRVSEAVIIKLFTPFGKVVREQFCYHMVGPRRGEPRGFCFVEYSNCEDAAKAIRALHGRKLYGRPLRVRFM----TVEGRGRMDY-STDSKSGGSSSSFIANSD 564
            VE  P   L+VGNL YR+SE+ IIK+F+ FGK++ E F  H  GP+RGEPRG+ FV+YS  E+A  A   ++GR  +GRP+ VR      T EG       STD+K  G S S +++ D
Sbjct:   15 VEDEPECRLYVGNLDYRISESSIIKMFSCFGKIISEDFLMHKRGPKRGEPRGYAFVQYSTKEEAQLAKSKMNGRLFFGRPIVVRLASEKTTAEGTSTTGATSTDTKLYGISCSKLSHMD 133
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig78.77.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LT06_ECTSI1.730e-7179.29RRM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A169WBX9_DAUCS1.070e-2043.86RRM domain-containing protein n=3 Tax=Daucus carot... [more]
UPI001FB145654.230e-2042.73probable RNA-binding protein 18 n=1 Tax=Impatiens ... [more]
A0A2G5E0G3_AQUCA5.970e-2043.10RRM domain-containing protein n=2 Tax=Thalictroide... [more]
A0A176VG38_MARPO6.310e-2052.75RRM domain-containing protein n=2 Tax=Marchantia p... [more]
A0A565CPV0_9BRAS8.140e-2048.35RRM domain-containing protein n=1 Tax=Arabis nemor... [more]
A0A803MKS2_CHEQI1.100e-1951.11RRM domain-containing protein n=4 Tax=Chenopodium ... [more]
A0A2G5DIJ7_AQUCA1.810e-1943.10RRM domain-containing protein n=1 Tax=Aquilegia co... [more]
UPI000CECE4CA4.930e-1955.84probable RNA-binding protein 18 isoform X1 n=2 Tax... [more]
A0A833QJ63_9POAL5.960e-1946.22Putative RNA-binding protein 18 n=1 Tax=Carex litt... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig78contigP-littoralis_Contig78:345623..351034 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LT06
PFAMsRRM_1
Model size2741
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons5
Evalue5.84e-80
EggNOG OGs29A52@1|root,2RZNU@2759|Eukaryota
Ec32 ortholog descriptionRNA recognition motif domain, eukaryote
Ec32 orthologEc-08_004360.1
DescriptionRNA-binding protein
Cds size654
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig78.77.2prot_P-littoralis_Contig78.77.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig78 345674..348998 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791605.1051562-UTR-P-littoralis_Contig78:345622..3456731680791605.1051562-UTR-P-littoralis_Contig78:345622..345673Pylaiella littoralis U1_48UTRP-littoralis_Contig78 345623..345673 +
1680791605.1949866-UTR-P-littoralis_Contig78:348998..3510341680791605.1949866-UTR-P-littoralis_Contig78:348998..351034Pylaiella littoralis U1_48UTRP-littoralis_Contig78 348999..351034 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791605.1282868-CDS-P-littoralis_Contig78:345673..3458941680791605.1282868-CDS-P-littoralis_Contig78:345673..345894Pylaiella littoralis U1_48CDSP-littoralis_Contig78 345674..345894 +
1680791605.141197-CDS-P-littoralis_Contig78:347027..3471321680791605.141197-CDS-P-littoralis_Contig78:347027..347132Pylaiella littoralis U1_48CDSP-littoralis_Contig78 347028..347132 +
1680791605.1527529-CDS-P-littoralis_Contig78:347710..3478931680791605.1527529-CDS-P-littoralis_Contig78:347710..347893Pylaiella littoralis U1_48CDSP-littoralis_Contig78 347711..347893 +
1680791605.1651466-CDS-P-littoralis_Contig78:348289..3483771680791605.1651466-CDS-P-littoralis_Contig78:348289..348377Pylaiella littoralis U1_48CDSP-littoralis_Contig78 348290..348377 +
1680791605.1790009-CDS-P-littoralis_Contig78:348941..3489981680791605.1790009-CDS-P-littoralis_Contig78:348941..348998Pylaiella littoralis U1_48CDSP-littoralis_Contig78 348942..348998 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig78.77.2

>prot_P-littoralis_Contig78.77.2 ID=prot_P-littoralis_Contig78.77.2|Name=mRNA_P-littoralis_Contig78.77.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=218bp
MATTSGPSEKLEDDRDSSTGSTPTAASKSGAGGGAGEGAAAVAGGAAAGV
EVEAPPDVEGIPNETLFVGNLSYRVSEAVIIKLFTPFGKVVREQFCYHMV
GPRRGEPRGFCFVEYSNCEDAAKAIRALHGRKLYGRPLRVRFMTVEGRGR
MDYSTDSKSGGSSSSFIANSDGGKIPPPAGAGADAGAGAGVTKLALDKKV
ALLKLKLREAQQQSGTR*
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mRNA from alignment at P-littoralis_Contig78:345623..351034+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig78.77.2 ID=mRNA_P-littoralis_Contig78.77.2|Name=mRNA_P-littoralis_Contig78.77.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=5412bp|location=Sequence derived from alignment at P-littoralis_Contig78:345623..351034+ (Pylaiella littoralis U1_48)
TCTTCCTCCGCCTCCTCCGATGAGCCGCCATCCTCCAAGAAGAAAGCGGC
AATGGCAACTACATCAGGGCCATCAGAAAAGCTAGAGGACGATCGTGACA
GCAGTACCGGTAGCACCCCAACTGCCGCCAGCAAGAGCGGAGCGGGGGGA
GGGGCGGGCGAGGGGGCGGCGGCGGTGGCGGGGGGGGCAGCGGCAGGGGT
GGAGGTTGAGGCTCCGCCGGACGTGGAAGGGATTCCGAACGAAACCCTGT
TCGTGGGCAACCTCAGCTACAGGTGATGTTTACGTGCTTTTGTTGTCCCG
GGAGGTTGGGTGTTATCCGTGTGATTGCTTGTTTTGTGGTTTTTGCTCTG
CTGCTCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTAGTTGTTGCGCTC
ATCAGTCTTGTTAGATTCCGTCGGTGCTTGTTTTTTATGCTGTTCATTGG
CAAGACAGAGAGAAACGGGGAGAAAAAAGTCATGTTGTTGTTGTTGATCA
ACGCGCTCTTGACTGGAAAAAACTGCCTCATTTCGTTTTTCGACAACTCA
AACCCTCCCTGCCTGTGCACAACGAACTTGGTTCTTTCCCTGGCTTCGTG
TCACACTCATAGTCCAAACCCCCGTCACTTGTGCCTGGGTGATACGAGGA
GTTACTGACACGATGCCCGCCTTTATAGAAGTAATAATATGTCGAAGAAT
GTGAAGTGTATATTAAACCGTGCGTGCCGAAAAACGTGAAGTGTACGTAT
ATAAAACTGAAGGCCGTGTGTCAACAGCCCAGTCGGTGCTCTACGACTTT
GCTCGCCGACAACCACACCAACGACACACTCTCTGAAATCTGCAATCCCC
AACAAGCAGTCAATTACATGCTTCGAATGGCAGGAGACTCAAATGTTCTC
AAACGATACATGGACGAAAAGGAAAAAACATCAGTCAGAAAAGGTCCTGG
CACTACCAAAGGGCTCCGTGGATGAAACCGGAACATCTAAAGTGTAAGCT
TGAGAGATAGGCCGGTATTGCCCGCTCTTCTCCCTCACCCCGGTGGAGTG
GAAAGTAGGGATAGATGCGAATAGCAAACCTTCTTGCCCAACTGCTGTCT
TATGAATGTTCTCCGCATCGATTATTTTATTTACTAGGTATTTCTTTGTT
TTTTCACCGTGTCAACATCGGGGTCAGTAACCCCGGGGTTTGGTCTCCAG
ACTATCCGCAGCAGGAGACCTCATTTCATTCCTATTTCTGCGTTTGCGTT
TGCGGTATCATCCCATCCATTCTGCGCGCCGGTCTGCACCCTTTCGGTAC
AGTATAAGCTGGGCCCACCAGCCGGGGTTACGACAGGCAGGAGCCGTATT
CGTGTCAACATGTAACGAAGTAACAATCGAGAACGTCATGTGGTCTATAT
GCCAGGGTGTCCGAGGCGGTTATCATCAAGCTCTTCACCCCGTTCGGGAA
GGTGGTTCGGGAGCAGTTCTGCTACCACATGGTGGGGCCGAGACGCGGCG
AGCCCAGAGGGTGAGAGATGAGAGAGGATCAGCAATAGAGCGGGGAGAAA
AAGTGGGGCCACGTGGCACTTTGCTTCGAACTGGCGCGGAAGTATTTTCT
AGGCTCTCGTTCACCACTGCTGCGCCTACCTGACTGCTTCAAGTGTCCAT
TAATTCGGCCCCGTGTTTGGAGTGGGAAAGTCCAGGGTTTTTGTGCTTGA
GACGCGCGTTGAATCGGGTTTTTTTTTTTATTTTCGGTACCCACACTACC
TGCTTGAATTTTGTTTTTGCCTCTTATGTTCGTTCACTAAGGTAGCTTAT
ATTTCATGTGTTCATGTTAGATTCGTGTGTGTGAGTTTTGCCATCCCATC
TGTTCTGGGCACCAGTCTTCACCTTTCGGTTGAAATTGTGGGCGCCAGCC
GGGGTCACACAGGAGTTGTTGTTTTCTCACGACATAAAAAAAAATAACAT
TTTTTTTTTCGCCCAAGACGGTACGACACGACACTTTTCGCACTTGCAAA
GACGGCTCGACTTAAAGATGATCGGACGCCCTTAATACACACACATGTCT
ATTTACACGCATATTTTTTCTTCAAATCACCCCAAAAGGTTCTGTTTCGT
GGAGTACTCCAACTGCGAAGACGCGGCCAAAGCCATCCGGGCACTCCACG
GCCGCAAGCTGTACGGCCGACCCCTGCGGGTCCGCTTCATGACGGTGGAA
GGGAGGGGCCGGATGGACTACTCCACCGACAGTAAGAGCGGCGGCAGCAG
CAGCAGCTTCATAGCCAACAGGTGAGGGGCAAAAGCGTCGTGTTTGCACA
TTATCGTCTGACTGTGTATGCCGTTAGGCAGGCGGGAATCGGTCGGTAAA
GCTTTTTGTGTGTTGGGTCTTGTTGATTCACTTTGCTTGGCTTGGCTTGA
CGGTTTGTATGTGCTGGCCGGCCTTGCGAGAAAGTCGGAATGCCAAGACG
ACCACGACGACGTCGACAACGTGTGTTTGGGGTCAGGCAGGTCCTACCTG
CTATTTACACCTGACTGGGTTTGCAGTGCCGCACACGCAAGGCACGCGAC
TATTTTACCTTTCTGCCCCCCCCCCCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCACGCCCTTTTCGTGGTCTTGAATTGGCTCCGTTTCG
TCTGTATGCGGGATCAGTGATGGCGGAAAAATTCCACCACCCGCCGGAGC
CGGGGCGGACGCTGGAGCCGGAGCAGGCGTCACTAAGCTGGCCCTCGACA
AAAAGGTAAGACGCGCGCCTTTTTTTTCCTTTTCTTGCCGAACTGACTCT
GCGGAAAAGTTCCCCTTACCTAACGCTACGAGGACGGGATGTTCTTCTTT
CCCACCTCTGCCGACGGTCATTCAGTCTTACCGAACTCTACGGGAAGTAG
TTCCTACCGAAGTAACTCCGCGCAAGGTCTTCCTTACCGGACTCATTCTG
CCGAAGACCATCTTTTCCGAACTCACTCTACGGAAAGGTCCTTCTCACAC
ACCTGACTCTTTCGCAAGGTTAGCCGGGATTCACCCATCGCTCGCGGGGG
GGGGGGAATTCGGCCGCCCACAGCAGCGAAGTAAATCCCCAACTCATCTA
ACTCTCTCAAGGAAAGTCCCCCCCTCATTAACCGAACCCCACGCAAGGAA
CAGAGGAAGGCCGTGACCCTCCCGCGCTTGCATTTTCTGACGACGAACCT
CACGCAACCATGGTACCTTGTACACCCCTTGCAGCTATGTACTTGTAGTT
CGGAAAATAGTACGCACCCCCAAAAAACATGCGCCCATGTCGTTTCTGTT
GGATGGTTGAACGTCGCAGGTGGCGCTGTTGAAGCTCAAGCTGAGGGAGG
CGCAGCAGCAGTCGGGGACCCGATAGAGAACCGCGAAGCATCCATAGTAC
GAGGCAAAGGACAACAACAACAGAAATGTAAAAAAAAAAACGAGAACAGG
TCTCAATGAGCTCAGCTCAAGGGCAACGAAACTGCCTACCGCGGCGCGTG
AGATGTGTTTGTATCCGTAGTGTTGTGTGTGTTGTCATCCCATATTCTCT
GGCACACTAGTCTGCACCCTGCGGTTCAAACTACAGGCTAGGCCCATCGA
CGGGGTCACACAGGAGGAAGGTCAACACAGGAGGAGTTACCCCCACCTTC
CTTCTGCGGTACATGCGTGAGATTTTTTCTCGCGAGCAGCGATCCGCGGT
GCCTACCCTCGTCGGCGAAGCCGAATCTGCTTTTACTAACAGCATAGCCG
CTTTCAAAGTAGCAAAGGAACACATTCACCGGGAATCGAACCCCCGTTCC
TCTGCATCTAGTGGCCAACGAGGGGACCACTAGTCCGTAGTGTATTGTGT
CACGTCACCGCATGTCTGGGACGGGCGATGCAGCAGTGCGTATCATACAT
ATTTGCATTCATGTGTTCGTTTTATCAGGCACACTAAATCCCTCCTCGGG
GGGGGGGGCACTGCTGTTGTTGTACAAGTCCGAGGCCCCCTTTTCCTTTT
CGTTTTTGAATACGCCGAGGGAGGCTACTTGGCTCGTTTGGCGGTCTGCC
CGGTCTGGCTTGGTCTGCCCCGGCCTCTCCACACAGCCATCGCGGAAATA
ATGGTGTGTGTAAACCGGGAGAGAAGGCTCGTCAAGATTACTCGCGATGG
AACCTTCCTTCAGCATATCATATGCATACCGGTATACTTCGGTTAATGCT
TGTCATATTTTCATGAAGTACATACATACATATCATAGCACACATGATTA
ACACACAGGCTGTATTCCCCCAAGCGTCAAATTCATGTGCATGTACCGCT
GCGTTCGTTTGCGTTGACGTTGATGGTGGTGTCATTTTCCAAGACTGCTC
CTAACGTGCGGTACGCTAAGCATAGATACTGCACGAAAGCACGGTGCTCG
GTTGGTGACATGATATCAGTTTTCGTTGTCCTCGCAACCTGTGTAGTAAT
ATTTGTTGTATTGGCCAGGTTGGATGCTTTACTTTCGTAAACTTCGTACA
TACAATGAAGTACTCCGGAGTATATATTTATATGGGTACAATGAAGTATG
TTCAAATTATATTAAGATTGACACAATCTTTTGGGGCTGCTGCTGGGAGC
GATGCGGCTTTCGTCCTTCCTTGTCAGTCTCCTTGGCTAGGTTGGATTGG
CAGGCCAGAACGTGTCCAAGTTCAGTCCTTGTTGTTGTTGTCGTTGTTGC
TGTTGTTGTTTTGTCCAGGACAGAGCCCATCGATCGGTTGGTCTACACAG
TATATGATATTCTTCGTTTCTTGTACCGTAAAGACCGGGGTAAACGCCCC
CGCGACATGATACACAGCAAACGAACGCCCCGGCGCGCGAAGGGTTTTAT
CATACCGACCTCCGCGCAAACCACTCGTACCCTATTGCCTCTAAAAAAAA
GGGAGTGGAGGGGGACTAGCATGAGGTTGCATCAACCACACGCGCTTGCA
ATGATACATAACAAACGAACGGCCCGGCGCGCGAAAAACTTGAAAACAAA
AAGATCAACGCTCCAGGACGTGTTCTCTTCGGCGCTGCTTCTTCTGCAGA
AAGTCGCGCCGCCGACCGCCGAGCAGACAACACGCAAGTAGGTTGCGGGG
GTTGGAGCGCTGCTGCCGTAGCTGGCAGGGATGCTCCGCGCGGCTTTTTG
CAGTGGGGAAACAACGCAGATTTATTGTTAACACGTGTTTTTAATTAATT
CACTGCTGCTTGAACTTATTTTGTTGTTTTCATTCCGAAGCATTCTTTTT
GTACGCTCTTCGCCATTTGTAGTGTTGCAACGTACCACCACGCACGCAAC
ATAACAAGCACAAAAATGAAGATACTCTTTTCGCTCTCTGCTGTGCAGGT
CGAGATGCTGGGTAGTGTCAGTGTAGCACGCCGCCTGCGTCTTTTTTTTC
TATGAAATCGAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig78:345623..351034+

>mRNA_P-littoralis_Contig78.77.2 ID=mRNA_P-littoralis_Contig78.77.2|Name=mRNA_P-littoralis_Contig78.77.2|organism=Pylaiella littoralis U1_48|type=CDS|length=654bp|location=Sequence derived from alignment at P-littoralis_Contig78:345623..351034+ (Pylaiella littoralis U1_48)
ATGGCAACTACATCAGGGCCATCAGAAAAGCTAGAGGACGATCGTGACAG
CAGTACCGGTAGCACCCCAACTGCCGCCAGCAAGAGCGGAGCGGGGGGAG
GGGCGGGCGAGGGGGCGGCGGCGGTGGCGGGGGGGGCAGCGGCAGGGGTG
GAGGTTGAGGCTCCGCCGGACGTGGAAGGGATTCCGAACGAAACCCTGTT
CGTGGGCAACCTCAGCTACAGGGTGTCCGAGGCGGTTATCATCAAGCTCT
TCACCCCGTTCGGGAAGGTGGTTCGGGAGCAGTTCTGCTACCACATGGTG
GGGCCGAGACGCGGCGAGCCCAGAGGGTTCTGTTTCGTGGAGTACTCCAA
CTGCGAAGACGCGGCCAAAGCCATCCGGGCACTCCACGGCCGCAAGCTGT
ACGGCCGACCCCTGCGGGTCCGCTTCATGACGGTGGAAGGGAGGGGCCGG
ATGGACTACTCCACCGACAGTAAGAGCGGCGGCAGCAGCAGCAGCTTCAT
AGCCAACAGTGATGGCGGAAAAATTCCACCACCCGCCGGAGCCGGGGCGG
ACGCTGGAGCCGGAGCAGGCGTCACTAAGCTGGCCCTCGACAAAAAGGTG
GCGCTGTTGAAGCTCAAGCTGAGGGAGGCGCAGCAGCAGTCGGGGACCCG
ATAG
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