prot_P-littoralis_Contig78.72.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig78.72.2
Unique Nameprot_P-littoralis_Contig78.72.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length343
Homology
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BLAST of mRNA_P-littoralis_Contig78.72.2 vs. uniprot
Match: D8LT04_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT04_ECTSI)

HSP 1 Score: 377 bits (969), Expect = 4.890e-127
Identity = 228/392 (58.16%), Postives = 268/392 (68.37%), Query Frame = 0 
Query:    1 MLHVLKPRLDVYGHT-LRRSKGVDVCCARNGRRRLSTTAEPSKPGSASDEEPGWPLKYKIAGGAFLGTIIPWMFSYAVANDPGSRRLAGKLSPGL-----------VQWFRNR-KGGHFFDEDPKRLEYLAHVPDWIDQPVTIEVRTGSGETRRLMGLHARTPFSSVSGLVHEERSGGGGREGTGARRGWLTDFDVLDEGDSGDGEGEESRLASSPSSWDTSSSSSSFRD---------------NNGSVINDSVRRDVATCNIRSWWDIAALE-EQAXXXXXXXXXXXXXXXXXXXXX------------------TAGV---TSAQKMSAAEQAEAMIEHLDRLMEALEQDKITGARSVDDVEEEVRELRKQRKKLRRQHPGRRRFLGLF 342
            ML VL+PRL  +G   LRR K ++ C  ++G RRLSTTAEP+KP S + EEPGWPLKYK+AGGA LGTIIP++FSYA+ANDPGSRRL  KLSPG+           VQWFR R KGGHFFDEDPKRLEYLAHVPDWI++PV++E+RTGSGETRRL GL A+TPFSSV  LV      GGG         WLTDFDVLDEGD+GDGE +  ++   P++WD SSS +S                  N  S +  +VRRDVA CNIRSWWDIAALE EQA             XXXXXXXX                  T G    +SA+KMS AEQA AMI+HLD ++EALE+DK+TG RS+DDVEE VRELR+Q+K+LRR+HPGRRRFLGLF
Sbjct:    1 MLRVLQPRLPTHGRAPLRRPKVIEGCIRQHGHRRLSTTAEPAKPSSPAAEEPGWPLKYKVAGGAILGTIIPYIFSYAMANDPGSRRLVSKLSPGIATTLPGGGRLGVQWFRQRQKGGHFFDEDPKRLEYLAHVPDWINEPVSMEIRTGSGETRRLDGLDAQTPFSSVGRLVQ-----GGG---------WLTDFDVLDEGDTGDGEAQSGQI---PATWDISSSGASSASSYEHEGSSPYSATSANTSSGVAAAVRRDVAACNIRSWWDIAALEQEQARQPAPLATVAGSAXXXXXXXXXXXXXXXXXXXXXXXXVGTVGAARGSSAKKMSNAEQARAMIQHLDEMVEALERDKLTGVRSIDDVEEAVRELRRQQKELRRKHPGRRRFLGLF 375
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig78.72.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LT04_ECTSI4.890e-12758.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 283..303
NoneNo IPR availableCOILSCoilCoilcoord: 311..331
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 198..213
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..213

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig78contigP-littoralis_Contig78:319434..327079 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig78.72.2mRNA_P-littoralis_Contig78.72.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig78 319409..327982 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig78.72.2 ID=prot_P-littoralis_Contig78.72.2|Name=mRNA_P-littoralis_Contig78.72.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=343bp
MLHVLKPRLDVYGHTLRRSKGVDVCCARNGRRRLSTTAEPSKPGSASDEE
PGWPLKYKIAGGAFLGTIIPWMFSYAVANDPGSRRLAGKLSPGLVQWFRN
RKGGHFFDEDPKRLEYLAHVPDWIDQPVTIEVRTGSGETRRLMGLHARTP
FSSVSGLVHEERSGGGGREGTGARRGWLTDFDVLDEGDSGDGEGEESRLA
SSPSSWDTSSSSSSFRDNNGSVINDSVRRDVATCNIRSWWDIAALEEQAR
RPAATTATAAAAAPSSGGAATAGVTSAQKMSAAEQAEAMIEHLDRLMEAL
EQDKITGARSVDDVEEEVRELRKQRKKLRRQHPGRRRFLGLF*
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