prot_P-littoralis_Contig78.60.6 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig78.60.6
Unique Nameprot_P-littoralis_Contig78.60.6
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length756
Homology
BLAST of mRNA_P-littoralis_Contig78.60.6 vs. uniprot
Match: D8LT01_ECTSI (DNA polymerase delta subunit 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT01_ECTSI)

HSP 1 Score: 283 bits (723), Expect = 2.390e-84
Identity = 164/231 (71.00%), Postives = 172/231 (74.46%), Query Frame = 0
Query:    5 DADSSGGGTTVQYLEELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDFSQRQGGRKVSTTYLVTGRNGSGGSGAMEVKLVSAEGLDSTRKGLESVTSVHVYSVQAAPCSQPA-DISTQASALRRGRHRLHLWATDLEHSKEMVEESTDAGANLRTHRLSGVRCPESVDVPVPKAPPPPEVVQEESPFAPLGGAISGAAAAAGGR---KNAGSKPKGKAIAPKDFFAAA 231
            DA  + GGT VQYL+ELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDF QRQG RKVS TYLV GR+G GG GA+EVKLVSAEGLDSTRK LE+VT VHVYSVQ APCSQPA D+STQ            LWATDLEH+KEMVEEST+AGANLRTHRLSGVRCPE VDVPVPKAPP                               KNA SKPKGKAIAPKDFFAAA
Sbjct:    4 DAADASGGTQVQYLDELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDFCQRQGERKVSATYLVVGRSGIGGFGAVEVKLVSAEGLDSTRKALETVTCVHVYSVQPAPCSQPAADMSTQ------------LWATDLEHTKEMVEESTEAGANLRTHRLSGVRCPEGVDVPVPKAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNASSKPKGKAIAPKDFFAAA 222          
BLAST of mRNA_P-littoralis_Contig78.60.6 vs. uniprot
Match: A0A6H5KL09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL09_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 1.680e-30
Identity = 90/131 (68.70%), Postives = 96/131 (73.28%), Query Frame = 0
Query:  632 VSGAMDKFTAKGNGGGGSVGGVALKRTKTVLQNRTYMEGGYMKTVREEVEVTDDEEEPPLQPAKTNQTRIPPTDNKKAKTGEENGAENKA---AGTAGKTAAGKTKK----SAPKTTGKQQASMMSFFKKA 755
            V GAMDKFTAKGNG G    GVA+KRTKTVL++RTY EGGYMKTV EEVEVTDDEEE  LQPAKTNQ+R PP   KKAK G EN AE      AG  GK  A  TKK    +APK+ GKQ ASMMSFFKKA
Sbjct:  215 VRGAMDKFTAKGNGTGVDSSGVAVKRTKTVLKSRTYFEGGYMKTVNEEVEVTDDEEEA-LQPAKTNQSRTPPPGTKKAKIGVENKAEGSVETPAGAKGKDGATATKKKTAKAAPKSGGKQ-ASMMSFFKKA 343          
BLAST of mRNA_P-littoralis_Contig78.60.6 vs. uniprot
Match: A0A803YPC9_MELGA (DNA polymerase delta subunit 3 n=2 Tax=Neognathae TaxID=8825 RepID=A0A803YPC9_MELGA)

HSP 1 Score: 77.4 bits (189), Expect = 3.220e-13
Identity = 40/101 (39.60%), Postives = 63/101 (62.38%), Query Frame = 0
Query:   17 YLEELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDFSQRQ----GGRKVSTTYLVTGRNGSGGSGAMEVKLVSAEGLDSTRKGLESVTSVHVYSVQAA 113
            YLE ++ +V D+ ++VT++WL+  L V  N AK+MLYD+ +R+     G ++  TYLV G     G    +V +V  + L++ +  L +VTSVHVYS+Q A
Sbjct:    6 YLENIDEFVTDQNRIVTYKWLSYTLGVHVNQAKQMLYDYVERKRKENSGAQLHVTYLVAGNLTQNGHTCHKVAVVREDKLEAVKSKLTTVTSVHVYSIQKA 106          
BLAST of mRNA_P-littoralis_Contig78.60.6 vs. uniprot
Match: A0A8B9JG61_ASTMX (DNA polymerase delta subunit 3 n=1 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A8B9JG61_ASTMX)

HSP 1 Score: 80.1 bits (196), Expect = 2.770e-12
Identity = 45/129 (34.88%), Postives = 72/129 (55.81%), Query Frame = 0
Query:   17 YLEELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDF----SQRQGGRKVSTTYLVTGRNGSGGSGAMEVKLVSAEGLDSTRKGLESVTSVHVYSVQAAPCSQPADI-STQASALRRGRHRLHLWAT 140
            YL+ ++ +V D+ K+VT++WL+L L V  N AK+MLY +     + + G  +  TYLV+G+    GS   +V +V  + LD T+  L+   SVHVYSVQ A       + ST   A++      + ++T
Sbjct:    5 YLDNIDEYVNDQNKIVTYKWLSLTLGVHVNTAKQMLYHYLDQRRKERSGTTLHATYLVSGKCSENGSVCHKVSVVREDQLDDTKSKLDKTISVHVYSVQKAELKDSGPLYSTDYDAVKENLKNCNKYST 133          
BLAST of mRNA_P-littoralis_Contig78.60.6 vs. uniprot
Match: UPI0001CB96C3 (DNA polymerase delta subunit 3-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CB96C3)

HSP 1 Score: 80.1 bits (196), Expect = 3.090e-12
Identity = 42/95 (44.21%), Postives = 62/95 (65.26%), Query Frame = 0
Query:   17 YLEELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDFSQRQGGRKVSTTYLVTGRNGSGGSGAME-VKLVSAEGLDSTRKGLESVTSVHVYSV 110
            YLE L+ +V+DE K+VT++WL+  LSV  N AK+MLY + Q+Q  + +  TYLV G    G    M+ + LV    L++T+  L+ VTSVH+YS+
Sbjct:    7 YLENLQEYVVDENKIVTYKWLSKTLSVHVNQAKQMLYMYVQKQKKKDLCVTYLVGGEQKDGDGLVMKKLSLVRGNQLEATKCSLDKVTSVHIYSI 101          
BLAST of mRNA_P-littoralis_Contig78.60.6 vs. uniprot
Match: W5K564_ASTMX (DNA polymerase delta subunit 3 n=4 Tax=Astyanax mexicanus TaxID=7994 RepID=W5K564_ASTMX)

HSP 1 Score: 80.1 bits (196), Expect = 4.740e-12
Identity = 45/129 (34.88%), Postives = 72/129 (55.81%), Query Frame = 0
Query:   17 YLEELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDF----SQRQGGRKVSTTYLVTGRNGSGGSGAMEVKLVSAEGLDSTRKGLESVTSVHVYSVQAAPCSQPADI-STQASALRRGRHRLHLWAT 140
            YL+ ++ +V D+ K+VT++WL+L L V  N AK+MLY +     + + G  +  TYLV+G+    GS   +V +V  + LD T+  L+   SVHVYSVQ A       + ST   A++      + ++T
Sbjct:    5 YLDNIDEYVNDQNKIVTYKWLSLTLGVHVNTAKQMLYHYLDQRRKERSGTTLHATYLVSGKCSENGSVCHKVSVVREDQLDDTKSKLDKTISVHVYSVQKAELKDSGPLYSTDYDAVKENLKNCNKYST 133          
BLAST of mRNA_P-littoralis_Contig78.60.6 vs. uniprot
Match: H9GKZ2_ANOCA (DNA polymerase delta subunit 3 n=2 Tax=Anolis carolinensis TaxID=28377 RepID=H9GKZ2_ANOCA)

HSP 1 Score: 79.3 bits (194), Expect = 7.050e-12
Identity = 54/172 (31.40%), Postives = 84/172 (48.84%), Query Frame = 0
Query:   17 YLEELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDFSQRQG----GRKVSTTYLVTGRNGSGGSGAMEVKLVSAEGLDSTRKGLESVTSVHVYSVQAAPCSQPADI-STQASALRRGRHR------LHLWATDLEHSKEMVEESTDAGANLRTHRLSGVRCPESVDVPV 177
            YLE ++ +V D+ +VVT++WL+  L V  N AK+MLYD+ +R+     G ++  TYLV G     G    +V +V  E L++ +  L +V SVHVYS+Q A       + ST    ++           +H  A     + EM +  T A  N ++  L G     +   PV
Sbjct:    6 YLENIDEFVTDQNRVVTYKWLSYTLGVHVNQAKQMLYDYVERKRKESPGVQLHVTYLVAGNLVQNGHTCHKVAVVKEEKLEAMKSKLSTVASVHVYSIQKATLKDSGPLYSTDYDIIKANLQNCSKFSAIHCAAAVARSAAEMAQVETPASVNAQS--LPGTNAAAAAAAPV 175          
BLAST of mRNA_P-littoralis_Contig78.60.6 vs. uniprot
Match: UPI0009E350DA (DNA polymerase delta subunit 3-like isoform X2 n=2 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E350DA)

HSP 1 Score: 78.2 bits (191), Expect = 9.820e-12
Identity = 53/163 (32.52%), Postives = 82/163 (50.31%), Query Frame = 0
Query:   17 YLEELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDFSQRQGGRK----VSTTYLVTGRNGSGGSGAMEVKLVSAEGLDSTRKGLESVTSVHVYSVQAAPCSQPADIST-QASALRRGRHRLHLWATDLEHSKEMVEESTDAGANLRTHRLSGV----RCP 170
            YL  L+ +V DE K+VT++WL+  LSV  N AK+MLY F+Q+Q   K    ++ TY+V GR    G       +   E L+ T+K    VTS+H+YS+Q         + T      R+  +  + W+    H    V  + D G +  T R++G+    +CP
Sbjct:    8 YLANLDEFVNDEDKIVTYKWLSRTLSVPVNKAKQMLYAFAQKQKTSKSASHLNITYIVGGRCSLDGEKVHRYVITQDENLEETKKSFSVVTSLHIYSIQKCQLKDSNSLYTVDYDMQRQHNNESNRWSHV--HCSAAVPLA-DKGVSRGTRRINGLANGEKCP 167          
BLAST of mRNA_P-littoralis_Contig78.60.6 vs. uniprot
Match: A0A673A7P9_9TELE (DNA polymerase delta subunit 3 n=2 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A673A7P9_9TELE)

HSP 1 Score: 77.8 bits (190), Expect = 1.120e-11
Identity = 52/161 (32.30%), Postives = 81/161 (50.31%), Query Frame = 0
Query:   17 YLEELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLY---DFSQRQGGRKVSTTYLVTGRNGSGGSGAMEVKLVSAEGLDSTRKGLESVTSVHVYSVQAAPCSQPADISTQASALRRGRHRLHLWATDLEHSKEMVEESTDAGANLRT-HRLSGVRCPESV 173
            YL+ ++ +V D  K+VT++WL+L L V  N AK+MLY   D  +++ G ++  TYLV+G+    G  + +V +V  E L+  +  +  V SVHVYSVQ A                       L++ D +  +E          NL+T  R S +RCP +V
Sbjct:    5 YLDNIDEYVNDHNKIVTYKWLSLTLGVHVNTAKQMLYHYLDHKRKESGAQLHATYLVSGKFVDNGQTSHKVSVVREEQLEDFKSKMNLVVSVHVYSVQKALLKDSGP----------------LYSVDYDAVRE----------NLKTCSRYSAIRCPSAV 139          
BLAST of mRNA_P-littoralis_Contig78.60.6 vs. uniprot
Match: UPI000C04A474 (DNA polymerase delta subunit 3-like n=1 Tax=Stylophora pistillata TaxID=50429 RepID=UPI000C04A474)

HSP 1 Score: 79.3 bits (194), Expect = 1.190e-11
Identity = 52/156 (33.33%), Postives = 77/156 (49.36%), Query Frame = 0
Query:   17 YLEELEGWVLDEQKVVTFRWLALVLSVTANAAKKMLYDFSQRQGGRKVST----TYLVTGRNGSGGSGAMEVKLVSAEGLDSTRKGLESVTSVHVYSVQAAPCSQPADIST-QASALRRGRHRLHLWATDLEHSKEMVEESTDAGANLRTHRLSGV 167
            YL  L+ +V DE ++VT++WL+  LSV AN AK+MLY F ++Q G K  +    TYL+ GR    G       +   E L+ T+K    VTS+H+YSVQ         + T      ++     + W+    H    V  + D G N   H ++GV
Sbjct:    8 YLANLDEFVNDENRIVTYKWLSRTLSVPANRAKQMLYAFVEKQKGSKTGSELDVTYLIGGRCSVDGDTVHRFVITQDEKLEETKKNFSLVTSLHIYSVQKCKLKDSNSLYTVDYDVQKQHSSETNRWSHI--HCSAAVPRA-DKGVNRDAHLMNGV 160          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig78.60.6 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LT01_ECTSI2.390e-8471.00DNA polymerase delta subunit 3 n=1 Tax=Ectocarpus ... [more]
A0A6H5KL09_9PHAE1.680e-3068.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A803YPC9_MELGA3.220e-1339.60DNA polymerase delta subunit 3 n=2 Tax=Neognathae ... [more]
A0A8B9JG61_ASTMX2.770e-1234.88DNA polymerase delta subunit 3 n=1 Tax=Astyanax me... [more]
UPI0001CB96C33.090e-1244.21DNA polymerase delta subunit 3-like n=1 Tax=Saccog... [more]
W5K564_ASTMX4.740e-1234.88DNA polymerase delta subunit 3 n=4 Tax=Astyanax me... [more]
H9GKZ2_ANOCA7.050e-1231.40DNA polymerase delta subunit 3 n=2 Tax=Anolis caro... [more]
UPI0009E350DA9.820e-1232.52DNA polymerase delta subunit 3-like isoform X2 n=2... [more]
A0A673A7P9_9TELE1.120e-1132.30DNA polymerase delta subunit 3 n=2 Tax=Sphaeramia ... [more]
UPI000C04A4741.190e-1133.33DNA polymerase delta subunit 3-like n=1 Tax=Stylop... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019038DNA polymerase delta subunit 3PFAMPF09507CDC27coord: 30..115
e-value: 5.2E-23
score: 82.1
IPR019038DNA polymerase delta subunit 3PANTHERPTHR17598DNA POLYMERASE DELTA SUBUNIT 3coord: 14..361
IPR041913DNA polymerase delta subunit 3 superfamilyGENE3D3.90.1030.20DNA polymerase delta, p66 (Cdc27) subunit, wHTH domaincoord: 13..170
e-value: 7.4E-33
score: 115.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 551..574
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 734..748
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 386..400
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 534..550
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 591..620
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 679..755
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 422..438
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 469..487
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 307..657

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig78contigP-littoralis_Contig78:256087..262034 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig78.60.6mRNA_P-littoralis_Contig78.60.6Pylaiella littoralis U1_48mRNAP-littoralis_Contig78 254084..262809 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig78.60.6 ID=prot_P-littoralis_Contig78.60.6|Name=mRNA_P-littoralis_Contig78.60.6|organism=Pylaiella littoralis U1_48|type=polypeptide|length=756bp
MGGEDADSSGGGTTVQYLEELEGWVLDEQKVVTFRWLALVLSVTANAAKK
MLYDFSQRQGGRKVSTTYLVTGRNGSGGSGAMEVKLVSAEGLDSTRKGLE
SVTSVHVYSVQAAPCSQPADISTQASALRRGRHRLHLWATDLEHSKEMVE
ESTDAGANLRTHRLSGVRCPESVDVPVPKAPPPPEVVQEESPFAPLGGAI
SGAAAAAGGRKNAGSKPKGKAIAPKDFFAAAAGGKGKGKGKGGGGGGGGG
ESKAAIEDGQGAAAAATAVAAPAKKKTGIGSFFGKASAAPPSAAPAKKVT
DTKKGGAEAGDYVDADDTIDLASGDEDGAAAAAAETKKQQPQPKPRSSRK
MVIEEDDDEEELLPSGGGLGAGNGCDAVQKEGEVGDEGDGLEDSEEEWDD
GVGNSSSKIPAAAAAAAAVGAVVSTKSSSSSSKKPTTAPTAAAVAAAAAA
KKGEEETKKKKKKSPPAPSSKSKKASSETNNAGSQDDGGCEDASDPADED
EKNKKHGAKKTKATTPPSTASSAKKKPRKSLPDSSESGNEGSSSSSSSSS
DGGDDEKESGAAAKASEKKPKKNASGGKRGVGSDGGAESKDSGGGEAEKK
KRGKAGGAGGKRKGRYDSDDDEGEETPEKGAVSGAMDKFTAKGNGGGGSV
GGVALKRTKTVLQNRTYMEGGYMKTVREEVEVTDDEEEPPLQPAKTNQTR
IPPTDNKKAKTGEENGAENKAAGTAGKTAAGKTKKSAPKTTGKQQASMMS
FFKKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019038POLD3
IPR041913POLD3_sf