prot_P-littoralis_Contig78.6.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig78.6.1
Unique Nameprot_P-littoralis_Contig78.6.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length45
Homology
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BLAST of mRNA_P-littoralis_Contig78.6.1 vs. uniprot
Match: A0A6H5JJA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJA7_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 1.090e-11
Identity = 29/34 (85.29%), Postives = 32/34 (94.12%), Query Frame = 0 
Query:    1 MELIGANQIPRPRIDLTGIPGSSKLHQFMRAEKQ 34
            MELIGAN+IPRPR+DLTGIPGSSKL+QFM AE Q
Sbjct:   49 MELIGANEIPRPRVDLTGIPGSSKLYQFMGAENQ 82
[Close]
BLAST of mRNA_P-littoralis_Contig78.6.1 vs. uniprot
Match: A0A6H5KF65_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF65_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 5.450e-8
Identity = 26/34 (76.47%), Postives = 30/34 (88.24%), Query Frame = 0 
Query:    1 MELIGANQIPRPRIDLTGIPGSSKLHQFMRAEKQ 34
            +ELIGANQI RPR+DLTGI G+SKL+QFM AE Q
Sbjct:  569 IELIGANQIRRPRVDLTGIRGTSKLYQFMGAENQ 602
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig78.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JJA7_9PHAE1.090e-1185.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF65_9PHAE5.450e-876.47Reverse transcriptase Ty1/copia-type domain-contai... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig78contigP-littoralis_Contig78:61581..61715 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig78.6.1mRNA_P-littoralis_Contig78.6.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig78 61532..61840 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig78.6.1 ID=prot_P-littoralis_Contig78.6.1|Name=mRNA_P-littoralis_Contig78.6.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=45bp
MELIGANQIPRPRIDLTGIPGSSKLHQFMRAEKQGWNQQILESW*
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