prot_P-littoralis_Contig776.27.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig776.27.1
Unique Nameprot_P-littoralis_Contig776.27.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length86
Homology
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BLAST of mRNA_P-littoralis_Contig776.27.1 vs. uniprot
Match: A0A6H5KNQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ6_9PHAE)

HSP 1 Score: 52.0 bits (123), Expect = 5.980e-6
Identity = 25/54 (46.30%), Postives = 32/54 (59.26%), Query Frame = 0 
Query:   28 PTWKFNRGTLTSTPSIATLNAFYTAGHEGNLVGAATSKDHPRKIVFAKAVGQAV 81
            P WKF RGTL  TPS+A LN  Y AGH+         KD+ R+++ A+  GQ V
Sbjct:   49 PGWKFVRGTLVGTPSVAVLNTIYNAGHD-------EEKDYMRRVIQAECEGQIV 95
[Close]
BLAST of mRNA_P-littoralis_Contig776.27.1 vs. uniprot
Match: A0A6H5JB16_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB16_9PHAE)

HSP 1 Score: 49.7 bits (117), Expect = 6.250e-5
Identity = 24/52 (46.15%), Postives = 33/52 (63.46%), Query Frame = 0 
Query:   28 PTWKFNRGTLTSTPSIATLNAFYTAGHEGNLVGAATSKDHPRKIVFAKAVGQ 79
            P WKF+RGTL STPSIA LN  Y AGH+ +       K+H ++ + ++  GQ
Sbjct:   39 PGWKFSRGTLISTPSIAVLNTIYKAGHDDD-------KEHMQREIHSQYGGQ 83
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig776.27.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KNQ6_9PHAE5.980e-646.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JB16_9PHAE6.250e-546.15Integrase catalytic domain-containing protein n=1 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 2..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig776contigP-littoralis_Contig776:46818..47948 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig776.27.1mRNA_P-littoralis_Contig776.27.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig776 46818..47948 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig776.27.1 ID=prot_P-littoralis_Contig776.27.1|Name=mRNA_P-littoralis_Contig776.27.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=86bp
AVEREQQAIEKERQKAIKKKDEPYPRRPTWKFNRGTLTSTPSIATLNAFY
TAGHEGNLVGAATSKDHPRKIVFAKAVGQAVRAKYE
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