mRNA_P-littoralis_Contig776.23.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig776.23.1 vs. uniprot
Match: Q8QNC4_ESV1K (EsV-1-158 n=2 Tax=root TaxID=1 RepID=Q8QNC4_ESV1K) HSP 1 Score: 107 bits (266), Expect = 1.650e-25 Identity = 66/179 (36.87%), Postives = 91/179 (50.84%), Query Frame = 2
Query: 5 KVPTRLSFRVENWSCPLQCQRCGFVKSDRFPCLNKVCFGTPLC*RHNREEYGVVAKQSTIPGAGKGLFATKSF--STMVRPLISIVSTSATREK*RHHTRSA*GRIAASTLRVREGWVRLRMLCSRAVEKYLTSRF----TILC----QAYRRLRGGGQ----IWLRARKHIDVGEDIF 499
+ PT LSFR NWSCPL C +C + D C N+VCFG+P+C HN +YGV K STIPGAGKGLFAT+ + + P +T H R G AA T +V+ + CSR + ++F T+ + R R G +WL++ K I+ G++IF
Sbjct: 6 RAPTELSFRTANWSCPLTCGQCTHTRDDGLRCKNRVCFGSPVCWVHNARKYGVKIKDSTIPGAGKGLFATRKIPRDSWICPYSGEATTMNCI-----HQRYPEGETAAYTEQVQAN-LAYDCACSRGIGSLANAQFNSNGTVSALRRHNCFSRYRPVGDGVPGVWLKSTKVIEEGQEIF 178
BLAST of mRNA_P-littoralis_Contig776.23.1 vs. uniprot
Match: B5LWM5_9PHYC (Putative lysine methyltransferase n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWM5_9PHYC) HSP 1 Score: 102 bits (254), Expect = 1.020e-23 Identity = 41/71 (57.75%), Postives = 52/71 (73.24%), Query Frame = 2
Query: 5 KVPTRLSFRVENWSCPLQCQRCGFVKSDRFPCLNKVCFGTPLC*RHNREEYGVVAKQSTIPGAGKGLFATK 217
+ PT L F +NWSCPL+C +C F + + C N+VCFG PLC HN +++GV KQSTIPGAGKGLFAT+
Sbjct: 7 RAPTELRFETDNWSCPLKCNKCTFTRPNGLRCKNRVCFGFPLCWIHNSQKFGVKIKQSTIPGAGKGLFATR 77
BLAST of mRNA_P-littoralis_Contig776.23.1 vs. uniprot
Match: A0A6H5JFB7_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFB7_9PHAE) HSP 1 Score: 95.1 bits (235), Expect = 6.800e-21 Identity = 40/70 (57.14%), Postives = 51/70 (72.86%), Query Frame = 2
Query: 5 KVPTRLSFRVENWSCPLQCQRCGFVKSDRFPCLNKVCFGTPLC*RHNREEYGVVAKQSTIPGAGKGLFAT 214
+ PT LSFR +WSCPL+C +C +++ C N+VCFG+P+C HN +YGV K STIPGAGKGLFAT
Sbjct: 6 RSPTELSFRTADWSCPLKCGQCTHTRANGTRCRNRVCFGSPVCWLHNCIKYGVEIKDSTIPGAGKGLFAT 75
BLAST of mRNA_P-littoralis_Contig776.23.1 vs. uniprot
Match: A0A6H5JAG7_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAG7_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 1.200e-17 Identity = 55/125 (44.00%), Postives = 74/125 (59.20%), Query Frame = 1
Query: 217 IVQYDGETVDKHCIDKRYPGEMTASYAECV-GKNRC-IDSACSRGLGSLANAMFTSSGKVSHITFHNSLSSLQTATRRRPDMATRQ-KTHRCRGRHFHHYGND-YRLEHNHSTRHRQTVADTRPC 579
I Y GE K CI KRYPG+MTA+YAE + G + IDSAC RG+ SLAN +F ++G VS ++ HN +S + P + + K + F+ YG+ Y L+HNHST+ R DTRPC
Sbjct: 84 ICPYLGEKTSKDCIQKRYPGDMTAAYAEILPGPEQLHIDSACKRGVASLANGLFNANGSVSSLSRHNCVSRYRPVGDGVPGVWLKSTKPLKIGDEIFNWYGDGGYMLQHNHSTKRRTKAPDTRPC 208
BLAST of mRNA_P-littoralis_Contig776.23.1 vs. uniprot
Match: A0A6H5J8Q0_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8Q0_9PHAE) HSP 1 Score: 85.5 bits (210), Expect = 1.400e-17 Identity = 54/125 (43.20%), Postives = 74/125 (59.20%), Query Frame = 1
Query: 217 IVQYDGETVDKHCIDKRYPGEMTASYAECV-GKNRC-IDSACSRGLGSLANAMFTSSGKVSHITFHNSLSSLQTATRRRPDMATRQ-KTHRCRGRHFHHYGND-YRLEHNHSTRHRQTVADTRPC 579
I Y GE K CI KRYPG+MTA+YAE + G + IDSAC RG+ SL+N +F ++G VS ++ HN +S + P + + K + F+ YG+ Y L+HNHST+ R DTRPC
Sbjct: 45 ICPYLGEKTSKDCIQKRYPGDMTAAYAEMLPGPEQLHIDSACKRGVASLSNGLFNANGSVSSLSRHNCVSRYRPVGDGVPGVWLKSTKPLKIGDEIFNWYGDGGYMLQHNHSTKRRTKAPDTRPC 169
BLAST of mRNA_P-littoralis_Contig776.23.1 vs. uniprot
Match: Q6XLV1_9PHYC (FirrV-1-G2 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLV1_9PHYC) HSP 1 Score: 82.4 bits (202), Expect = 7.060e-16 Identity = 38/77 (49.35%), Postives = 45/77 (58.44%), Query Frame = 2
Query: 11 PTRLSFRVEN------WSCPLQCQRCGFVKSDRFPCLNKVCFGTPLC*RHNREEYGVVAKQSTIPGAGKGLFATKSF 223
P +SF E WSCPL CQRC +V+ + C +VC G P C H R +GV K STIP AGKGLFAT+ F
Sbjct: 14 PREMSFVFEKDEDDSTWSCPLLCQRCAYVRPNGEQCKKRVCVGHPFCWIHVRAAFGVTVKTSTIPNAGKGLFATRDF 90
BLAST of mRNA_P-littoralis_Contig776.23.1 vs. uniprot
Match: A0A6H5K4T1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4T1_9PHAE) HSP 1 Score: 63.9 bits (154), Expect = 1.240e-8 Identity = 32/73 (43.84%), Postives = 41/73 (56.16%), Query Frame = 2
Query: 2 TKVPTRLSFRVENWSCPLQCQRCGFVKSDRFPCLNKVCFGTPLC*RHNREEYGVVAKQSTIPGAGKGLFATKS 220
++ T F+ +WS PL RC C +V FG PL HN+ +Y V K STIPGAG+GLFAT+S
Sbjct: 3 SRTKTSWYFQTADWSLPLVSGRCQHETRKGTRCKKRVSFGYPLRSVHNKLKYEVQIKPSTIPGAGEGLFATRS 75 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig776.23.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig776.23.1 >prot_P-littoralis_Contig776.23.1 ID=prot_P-littoralis_Contig776.23.1|Name=mRNA_P-littoralis_Contig776.23.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=194bp NKSAYPVKLSCRKLVVPPPVSTMRLCEIRSFSVPKQSLFRDTPLLATQPRback to top mRNA from alignment at P-littoralis_Contig776:35565..36146+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig776.23.1 ID=mRNA_P-littoralis_Contig776.23.1|Name=mRNA_P-littoralis_Contig776.23.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=582bp|location=Sequence derived from alignment at P-littoralis_Contig776:35565..36146+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig776:35565..36146+ >mRNA_P-littoralis_Contig776.23.1 ID=mRNA_P-littoralis_Contig776.23.1|Name=mRNA_P-littoralis_Contig776.23.1|organism=Pylaiella littoralis U1_48|type=CDS|length=582bp|location=Sequence derived from alignment at P-littoralis_Contig776:35565..36146+ (Pylaiella littoralis U1_48)back to top |