mRNA_P-littoralis_Contig775.27.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig775.27.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 199 bits (506), Expect = 4.690e-60 Identity = 94/112 (83.93%), Postives = 103/112 (91.96%), Query Frame = 1
Query: 1 KWRTLIEPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFRILKLAMTYQKQERLDYVFFTCCILHNMLHTYDGMDNLEENVNWVGSAELRNTWEHNVDSSSVGTKDVND 336
KWR LIEP+KYP++E D+ FS RLESVRKDVECFFGILK RFRILKLAMTYQKQERLDYVFFTCCILHNMLHT+DGM LEE+VNWVGSAEL+NT HN+DSSSVGTKD+ND
Sbjct: 305 KWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQNTSGHNLDSSSVGTKDLND 416
BLAST of mRNA_P-littoralis_Contig775.27.1 vs. uniprot
Match: A0A6H5JZL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZL5_9PHAE) HSP 1 Score: 165 bits (418), Expect = 3.090e-50 Identity = 80/113 (70.80%), Postives = 89/113 (78.76%), Query Frame = 1
Query: 4 WRTLIEPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFRILKLAMTYQKQERLDYVFFTCCILHNMLHTYDGMDNLEENVNWVGSAELRNTW--EHNVDSSSVGTKDVND 336
W+ LIEP+KYP++E D+ F RLESVRKDVECFFGILK RFRILKLAM YQ QER+D VFFTCCILHNMLHT+DGMD L EN NW+ SA + T E D SVGTKDVND
Sbjct: 18 WQILIEPSKYPLSENDLLFLKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWISSAGVGATLATEPEADCGSVGTKDVND 130
BLAST of mRNA_P-littoralis_Contig775.27.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE) HSP 1 Score: 169 bits (429), Expect = 7.300e-50 Identity = 82/114 (71.93%), Postives = 91/114 (79.82%), Query Frame = 1
Query: 1 KWRTLIEPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFRILKLAMTYQKQERLDYVFFTCCILHNMLHTYDGMDNLEENVNWVGSAELRNTW--EHNVDSSSVGTKDVND 336
KW+ LIEP+KYP++E+D+ FS RLESVRKDVECFFGILK RFRILKLAM YQ QER+D VFFTCCILHNMLHT+DGMD L EN NWV SA + T E D S GTKDVND
Sbjct: 181 KWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTLATEPEADCGSFGTKDVND 294
BLAST of mRNA_P-littoralis_Contig775.27.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI) HSP 1 Score: 164 bits (416), Expect = 2.510e-48 Identity = 80/113 (70.80%), Postives = 89/113 (78.76%), Query Frame = 1
Query: 1 KWRTLIEPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFRILKLAMTYQKQERLDYVFFTCCILHNMLHTYDGMDNLEENVNWVGSAELRNT--WEHNVDSSSVGTKDVN 333
KW+ LIEP+KYP++E D+ FS RLESVRKDVECFFGILK R RIL LAM +Q QER+D VFFTCCILHNMLHT+DGMD L EN NWV SA + T E DS SVGTKDVN
Sbjct: 136 KWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTSVTEPEADSGSVGTKDVN 248
BLAST of mRNA_P-littoralis_Contig775.27.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 165 bits (418), Expect = 3.850e-47 Identity = 82/114 (71.93%), Postives = 90/114 (78.95%), Query Frame = 1
Query: 1 KWRTLIEPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFRILKLAMTYQKQERLDYVFFTCCILHNMLHTYDGMDNLEENVNWVGSAELRNTW--EHNVDSSSVGTKDVND 336
KW+ LIEP+KYP++E D+ FS RLESVRKDVECFFGILK RFRILKLAM YQ QER+D VFFTC ILHNMLHT+DGMD L EN NWV SA + T E D SVGTKDVND
Sbjct: 291 KWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTNWVSSAGVGATLTTEPEADCGSVGTKDVND 404
BLAST of mRNA_P-littoralis_Contig775.27.1 vs. uniprot
Match: A0A6H5JTC6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC6_9PHAE) HSP 1 Score: 155 bits (393), Expect = 1.890e-45 Identity = 73/110 (66.36%), Postives = 84/110 (76.36%), Query Frame = 1
Query: 1 KWRTLIEPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFRILKLAMTYQKQERLDYVFFTCCILHNMLHTYDGMDNLEENVNWVGSAELRNTWEHN--VDSSSVGTK 324
KW TLI P+KYPI + D+ FS RLESVRKDVECFFGI+K FRILKL++ Y KQE +D VFFTCCILHNMLH+YD +EE NW G+A L N WEHN +D SSVG K
Sbjct: 93 KWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGLFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAK 202
BLAST of mRNA_P-littoralis_Contig775.27.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 157 bits (398), Expect = 1.330e-44 Identity = 77/114 (67.54%), Postives = 86/114 (75.44%), Query Frame = 1
Query: 1 KWRTLIEPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFRILKLAMTYQKQERLDYVFFTCCILHNMLHTYDGMDNLEENVNWVGSAELRN--TWEHNVDSSSVGTKDVND 336
KW+ L+EPTKYP++E DI FS RLESVRKDVECFFGILK FRI K+AM Y +QER+D VFFTCCILHNMLHT+DGMD L EN WV SA E DSS+VG KD ND
Sbjct: 276 KWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVENTLWVSSAGAGTGVATEQEADSSTVGAKDTND 389
BLAST of mRNA_P-littoralis_Contig775.27.1 vs. uniprot
Match: A0A6H5JXJ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXJ4_9PHAE) HSP 1 Score: 149 bits (377), Expect = 1.360e-44 Identity = 74/109 (67.89%), Postives = 80/109 (73.39%), Query Frame = 1
Query: 16 IEPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFRILKLAMTYQKQERLDYVFFTCCILHNMLHTYDGMDNLEENVNWVGSAELRN--TWEHNVDSSSVGTKDVND 336
+EPTKYP++E DI FS RLESVRKDVECFFGILK RFRILKL M Y +QER+D VFFTCCILHNMLH +DGMD L EN WV A E DSS VG KD ND
Sbjct: 1 MEPTKYPLSENDILFSKRLESVRKDVECFFGILKGRFRILKLVMAYHEQERIDNVFFTCCILHNMLHIFDGMDQLVENTLWVSGAGAGTGVATEQEADSSFVGAKDTND 109
BLAST of mRNA_P-littoralis_Contig775.27.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 158 bits (400), Expect = 3.820e-44 Identity = 74/110 (67.27%), Postives = 85/110 (77.27%), Query Frame = 1
Query: 1 KWRTLIEPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFRILKLAMTYQKQERLDYVFFTCCILHNMLHTYDGMDNLEENVNWVGSAELRNTWEHN--VDSSSVGTK 324
KW TLI P+KYPI + D+ FS RLESVRKDVECFFGI+K RFRILKL++ Y KQE +D VFFTCCILHNMLH+YD +EE NW G+A L N WEHN +D SSVG K
Sbjct: 334 KWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAK 443
BLAST of mRNA_P-littoralis_Contig775.27.1 vs. uniprot
Match: A0A6H5JQM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM6_9PHAE) HSP 1 Score: 150 bits (378), Expect = 5.390e-43 Identity = 70/112 (62.50%), Postives = 85/112 (75.89%), Query Frame = 1
Query: 1 KWRTLIEPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFRILKLAMTYQKQERLDYVFFTCCILHNMLHTYDGMDNLEENVNWVGSAELRNTWEHN--VDSSSVGTKDV 330
+W TLI P+KYP + +D FS LESVRKDVECFFGILK RFRILKL M Y K+E +D +FFTCCILHNMLHT+DG+D +EN +W GSA + WEH+ D +SVG+K V
Sbjct: 93 EWVTLIAPSKYPQSNKDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDVFDENTDWTGSAGHHDAWEHDPLTDYTSVGSKGV 204 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig775.27.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig775.27.1 >prot_P-littoralis_Contig775.27.1 ID=prot_P-littoralis_Contig775.27.1|Name=mRNA_P-littoralis_Contig775.27.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=112bp KWRTLIEPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFRILKLAMTback to top mRNA from alignment at P-littoralis_Contig775:87496..87831- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig775.27.1 ID=mRNA_P-littoralis_Contig775.27.1|Name=mRNA_P-littoralis_Contig775.27.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=336bp|location=Sequence derived from alignment at P-littoralis_Contig775:87496..87831- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig775:87496..87831- >mRNA_P-littoralis_Contig775.27.1 ID=mRNA_P-littoralis_Contig775.27.1|Name=mRNA_P-littoralis_Contig775.27.1|organism=Pylaiella littoralis U1_48|type=CDS|length=336bp|location=Sequence derived from alignment at P-littoralis_Contig775:87496..87831- (Pylaiella littoralis U1_48)back to top |