mRNA_P-littoralis_Contig1196.3.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1196.3.1
Unique NamemRNA_P-littoralis_Contig1196.3.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1196.3.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE)

HSP 1 Score: 438 bits (1126), Expect = 2.400e-150
Identity = 232/344 (67.44%), Postives = 249/344 (72.38%), Query Frame = 1
Query:   10 FRAKFNNWYQRFCKRRGFSIRRRTSVGQKLPTGHEGMAWATVMKLRQALLKRA---------------------------ESVAEQVFEELGNMDQTPVQHEMPVETTLEKRGAKDARISTGGKEKKRFTLCLAVMADGGKVPLRIIFKGTPFIPPTKSGKGKSTQPRKG-----------------------------WCDARECTLWLTESWKLRPNNGSIIKQRPSILVLDDFKCHKDEGFIADLLKRANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTATAVPDTRTGKLKPPGRGQVSTWCKQAWAQITPELVKTCFKICGLTLALDGSED 873
            F+ KFN+WYQRF KR GFSIRRRTSVGQKLP G EGMAWATVMKLR+AL+KRA                            SV  +VFEELGNMDQTPVQHE+PVETTLEK GAKDARISTGGKEK+RFTL LAVMADG KV  RIIFKGTPF PPT SGKGKST PRK                              W D REC  W++ SWKLRPNNGSI++QRP ILVLDDFKCHKDEGFIA L + ANTIVI IPG LTPLLQPLDRMLNKQMKRLLR  YTA++A+AV D R+GKLKPP RG VSTWCK+AW   TPE VKTCF ICGLTLALDGSED
Sbjct:   27 FKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGDEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSED 370          
BLAST of mRNA_P-littoralis_Contig1196.3.1 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE)

HSP 1 Score: 430 bits (1106), Expect = 5.180e-148
Identity = 233/373 (62.47%), Postives = 254/373 (68.10%), Query Frame = 1
Query:   10 FRAKFNNWYQRFCKRRGFSIRRRTSVGQKLPTGHEGMAWATVMKLRQALLKRA---------------------------ESVAEQVFEELGNMDQTPVQHEMPVETTLEKRGAKDARISTGGKEKKRFTLCLAVMADGGKVPLRIIFKGTPFIPPTKSGKGKSTQPRKG-----------------------------WCDARECTLWLTESWKLRPNNGSIIKQRPSILVLDDFKCHKDEGFIADLLKRANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTATAVPDTRTGKLKPPGRGQVSTWCKQAWAQITPELV-----------------------------KTCFKICGLTLALDGSED 873
            F+ K N+WYQRF KR GFSIRRRTSVGQKLP G+EGMAWATVMKLR+AL++RA                            SV  +VF+ELGNMDQTPVQHEMPVETTLEK GAKDARISTGGKEK+RFTL LAVMADG KV  RIIFKGTPFIPP  SGKGKST PRK                              W D REC  W++ SWKLRPNNGSI++QRP ILVLDDFKCHKDEG+IA L + ANTIVI+IPGGLTPLLQPLDRMLNKQMKRLLRG YTA++A+AV D R+GKLKPP RG VSTWCK+AW  ITPE V                             KTCFKICGLTLALDGSED
Sbjct:   27 FKVKINSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVRRAGEIYARRHPPAPDESPIKGEDLTFEQLASVEAEVFKELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIVIVIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESITPETVSSVRKERFALGDVRAWSGENPACSVXETVKTCFKICGLTLALDGSED 399          
BLAST of mRNA_P-littoralis_Contig1196.3.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE)

HSP 1 Score: 433 bits (1114), Expect = 4.920e-147
Identity = 228/370 (61.62%), Postives = 254/370 (68.65%), Query Frame = 1
Query:   10 FRAKFNNWYQRFCKRRGFSIRRRTSVGQKLPTGHEGMAWATVMKLRQALLKRA---------------------------ESVAEQVFEELGNMDQTPVQHEMPVETTLEKRGAKDARISTG--------------------------GKEKKRFTLCLAVMADGGKVPLRIIFKGTPFIPPTKSGKGKSTQPRKG-----------------------------WCDARECTLWLTESWKLRPNNGSIIKQRPSILVLDDFKCHKDEGFIADLLKRANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTATAVPDTRTGKLKPPGRGQVSTWCKQAWAQITPELVKTCFKICGLTLALDGSED 873
            F++KF +WYQRF KR  FSIRRRTSVG +LP GHEGMAWAT+MKLR+ALL+RA                           E V +++F++LGNMDQTPVQ+EMPVETTLEK GAKDARI+TG                          GKEK+RFTLCLAV ADG KVPLRIIFKGTPF+PP   GKGK+TQPRK                              WCD RE  LW+ +SWKLRPNNGS+++QR  ILVLDDFKCHKD+GFIA L + ANTIVI IPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTA A  D +TGKL PPGRG V+TWCK AWA ITPE VKTCFKICGLTLALDGSED
Sbjct:  114 FKSKFKSWYQRFRKRNKFSIRRRTSVGIRLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFKDLGNMDQTPVQYEMPVETTLEKTGAKDARIATGAGVCCIRTILKPLPYPPTSCILPPPPGKEKERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSED 483          
BLAST of mRNA_P-littoralis_Contig1196.3.1 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE)

HSP 1 Score: 446 bits (1147), Expect = 1.930e-145
Identity = 226/336 (67.26%), Postives = 247/336 (73.51%), Query Frame = 1
Query:   16 AKFNNWYQRFCKRRGFSIRRRTSVGQKLPTGHEGMAWATVMKLRQALLKRA---------------------------ESVAEQVFEELGNMDQTPVQHEMPVETTLEKRGAKDARISTGGKEKKRFTLCLAVMADGGKVPLRIIFKGTPFIPPTKSGKGKSTQPRKG-----------------------------WCDARECTLWLTESWKLRPNNGSIIKQRPSILVLDDFKCHKDEGFIADLLKRANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTATAVPDTRTGKLKPPGRGQVSTWCKQAWAQITPELVKTCFKICGLTLA 855
            +KF +WYQRFCKR  FSIRRRTSVGQKLP GHEGMAWAT+MKLR+ALL+RA                           E V +++FEELGNMDQTPVQHEMPVETTLE  GAKDARI+TGGKEK+RFTLCLAV ADG KVPLRIIFKGTPF+PP   GKGK+TQPRK                              WCD REC LW+ +SWKLRPNNGSI++QR  ILVLDDFKCHKD+GFIA L + ANTIVI IPGGL PL QPLDRMLNKQMKRLLRGMYTAHTA A  D +TGKL PPGRG V+TWCK AWA ITPE+VKTCFKICGLTLA
Sbjct:  183 SKFKSWYQRFCKRNKFSIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLENTGAKDARIATGGKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLIPLFQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLVPPGRGAVATWCKNAWASITPEIVKTCFKICGLTLA 518          
BLAST of mRNA_P-littoralis_Contig1196.3.1 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE)

HSP 1 Score: 429 bits (1104), Expect = 4.000e-144
Identity = 228/346 (65.90%), Postives = 250/346 (72.25%), Query Frame = 1
Query:    7 EFRAKFNNWYQRFCKRRGFSIRRRTSVGQKLPTGHEGMAWATVMKLRQALLKRA---------------------------ESVAEQVFEELGNMDQTPVQHEMPVETTLEKRGAKDARISTGG-KEKKRFTLCLAVMADGGKVPLRIIFKGTPFIPPTKSGKGKSTQPRKG-----------------------------WCDARECTLWLTESWKLRPNNGSIIKQRPSILVLDDFKCHKDEGFIADLLKRANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTATAVPDTRTGKLKPPGRGQVSTWCKQAWAQITPELVKTCFKICGLTLALDGSED 873
            +F+ KFN+WYQRF KR GFSIRRRTSVGQKLP G+EGMAWATVMKL +AL+KRA                            SV  +VFEE+GNMDQ PVQHEMPVETTL+K GAKDARISTGG  EK+RFTL LAV ADG KV  RIIF+GTPFIPPT SGKGKST+PRK                              W D REC  W++ SWKLRPNNGSI++QRP ILVLDDFKCH DEGFIA L + ANTIVI IPGGLTPLLQPLDRMLNKQMKRLLRG YTA++ +AV D R+GKLKPP RG VSTWCK+AW  ITPE VKTC KICGLTLALDGSED
Sbjct:  220 DFKFKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLCEALVKRAGEIYARRHPPAPDESPIKGEDLNSEQLASVEAEVFEEVGNMDQMPVQHEMPVETTLDKTGAKDARISTGGGNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSPSAVADARSGKLKPPERGVVSTWCKEAWESITPETVKTCSKICGLTLALDGSED 565          
BLAST of mRNA_P-littoralis_Contig1196.3.1 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE)

HSP 1 Score: 420 bits (1079), Expect = 3.200e-141
Identity = 227/352 (64.49%), Postives = 244/352 (69.32%), Query Frame = 1
Query:   10 FRAKFNNWYQRFCKRRGFSIRRRTSVGQKLPTGHEGMAWATVMKLRQALLKRA---------------------------ESVAEQVFEELGNMDQTPVQHEMPVETTLEKRGAKDARISTGGKEKKRFTLCLAVMADGGKVPLRIIFKGTPFIPPTKSGKGKSTQPRKG-----------------------------WCDARECTLWLTESWKL--------RPNNGSIIKQRPSILVLDDFKCHKDEGFIADLLKRANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTATAVPDTRTGKLKPPGRGQVSTWCKQAWAQITPELVKTCFKICGLTLALDGSED 873
            F+ KFN+WYQRF KR GFSIRRR SVGQKLP G+EGMAWATV KLR+AL+KRA                            SV  +VFEELGNMDQTPVQHEMPVETTLE  G KDARISTGGKEK+RFTL LAVMADG  V   IIFKGTPFIPPT SGKGKST PRK                              W   +EC  W+  SWKL        RPNNGSI++QRP ILVLDDFKCHKDEGFIA L + ANTIVI IPGGLTPLLQPLDRMLNKQMKRLLRG YTA++A AV D R+GKLKPP RG VSTWCK+AW  +T E V TCFKICGLTLALDGSED
Sbjct:  181 FKVKFNSWYQRFRKRNGFSIRRRASVGQKLPKGYEGMAWATVTKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQPASVEAEVFEELGNMDQTPVQHEMPVETTLEDTGGKDARISTGGKEKERFTLVLAVMADGKMVSPCIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEVHPANRAKHGHPANGMSFGVQEKSWSGQQECNGWIPGSWKLCPNNGSMXRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALNRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSAPAVADARSGKLKPPERGVVSTWCKEAWEFVTSETVNTCFKICGLTLALDGSED 532          
BLAST of mRNA_P-littoralis_Contig1196.3.1 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE)

HSP 1 Score: 417 bits (1071), Expect = 2.220e-139
Identity = 227/356 (63.76%), Postives = 245/356 (68.82%), Query Frame = 1
Query:   10 FRAKFNNWYQRFCKRRGFSIRRRTSVGQKLPTGHEGMAWATVMKLRQALLKRA---------------------------ESVAEQVFEELGNMDQTPVQHEMPVETTLEKRGAKDARISTGGKEKKRFTLCLAVMADGGKVPLRIIFKGTPFIPPTKSGKGKSTQPRKG------------------------------------------WCDARECTLWLTESWKLRPNNGSIIKQRPSILVLDDFKCHKDEGFIADLLKRANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTATAVPDTRTGKLKPPGRGQVSTWCKQAWAQITPELVKTCFKICGLTLALDGSE 870
            F+ KFN+WYQRF KR GFSIRRRTSVGQKLP G+EGMAWATVMKLR+AL+KRA                            SV  +VFEELGNMDQTPVQHEMPVETTLEK GAKDARISTGG+EK+RFTL LAVMADG KV  RIIFKGTPFIPPT SGK KST PRK                                           W D REC  W+  SWKLRPNNGSI++QRP ILVLDDFKCHKDEGFIA L + A T VI IPGGLT LLQPLDRMLNKQMKRLLRG YTA +A+AV D R+GKL PP  G VSTWCK+AW  IT + V+TCFKICGLTLALDGSE
Sbjct:  209 FKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGEEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPTVSGKVKSTLPRKNSVAWEIHSANXARSGCHGGRQNDVSPRIIFKGTPFIPPTEKSWSDQRECNGWIPGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRGAKT-VIFIPGGLTSLLQPLDRMLNKQMKRLLRGKYTACSASAVADARSGKLNPPEHGVVSTWCKEAWESITSKTVETCFKICGLTLALDGSE 563          
BLAST of mRNA_P-littoralis_Contig1196.3.1 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE)

HSP 1 Score: 406 bits (1043), Expect = 5.370e-136
Identity = 217/344 (63.08%), Postives = 243/344 (70.64%), Query Frame = 1
Query:   10 FRAKFNNWYQRFCKRRGFSIRRRTSVGQKLPTGHEGMAWATVMKLRQALLKRA---------------------------ESVAEQVFEELGNMDQTPVQHEMPVETTLEKRGAKDARISTGGKEKKRFTLCLAVMADGGKVPLRIIFKGTPFIPPTKSGKGKSTQPRKG-----------------------------WCDARECTLWLTESWKLRPNNGSIIKQRPSILVLDDFKCHKDEGFIADLLKRANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTATAVPDTRTGKLKPPGRGQVSTWCKQAWAQITPELVKTCFKICGLTLALDGSED 873
            FR KF NWY RF +R G SIRRRTSVGQKLPTG+EG+A+AT+MKLR ALL+RA                           ESVA +VFEELGNMDQTPVQ EMPVETTLEK GAKDARISTGGKEK+RFTLCLAVMADGGKVPLRIIFKG PFIPP+ + +GK+TQPRKG                             W DA ECTLWL+ESW  RPN+GS+IKQR SILVLDDF              R NT VILIPGGLTPLLQPLDRML+K+MKRL+R  YT + A+A+ D +TGKL+PPGRG VSTWCK++WA IT E VK CFK+CGLTLALDGSED
Sbjct:  200 FRTKFKNWYHRFRERHGLSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLSPAQLESVATEVFEELGNMDQTPVQQEMPVETTLEKGGAKDARISTGGKEKERFTLCLAVMADGGKVPLRIIFKGKPFIPPSTARRGKNTQPRKGSIAAEVLPANQTNFGYPVSGMSFGVQERSWYDACECTLWLSESWGFRPNHGSVIKQRHSILVLDDF--------------RTNTTVILIPGGLTPLLQPLDRMLDKEMKRLMRRRYTQYMASAIADPKTGKLQPPGRGLVSTWCKESWAAITAETVKMCFKVCGLTLALDGSED 529          
BLAST of mRNA_P-littoralis_Contig1196.3.1 vs. uniprot
Match: A0A6H5K583_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K583_9PHAE)

HSP 1 Score: 405 bits (1042), Expect = 3.080e-130
Identity = 222/392 (56.63%), Postives = 251/392 (64.03%), Query Frame = 1
Query:   10 FRAKFNNWYQRFCKRRGFSIRRRTSVGQKLPTGHEGMAWATVMKLRQALLKRA---------------------------ESVAEQVFEELGNMDQTPVQHEMPVETTLEKRGAKDARISTGGKEKKRFTLCLAVMADGGKVPLRIIFKGTPFIPPTKSGKGKSTQPRKG-----------------------------WCDARECTLWLTESWKLRPNNGSIIKQRPSILVLDDFKCHKDEGFIADLLKRANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMY------------------------------------------------TAHTATAVPDTRTGKLKPPGRGQVSTWCKQAWAQITPELVKTCFKICGLTLALDGSED 873
            FR KF NWY  F +R GFSIRRRTSVGQKLPTG+EG+A+AT+MKLR ALL+RA                           ESVA +VFEELGNMDQTPVQ EMPVETTLEKRG KDARISTGGKEK RFT CLAVMADGGKVP RIIFKG PFIPP+ +G+ K+TQ RKG                             WCDARECTLWL+ESW+ RPN+GS+IKQR SILVLDDF+CH+ E F+ DL +R NT VILIPGGLTPLLQPLDRMLNK+MKRL+RG                                                  T + A+A+ D +TGKL+PPGRG VST  K++WA ITPE VK CFK+CGLTLALDGSED
Sbjct:   96 FRTKFKNWYHCFRERHGFSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLTPAQLESVAAKVFEELGNMDQTPVQQEMPVETTLEKRGVKDARISTGGKEKDRFTPCLAVMADGGKVPQRIIFKGKPFIPPSTAGREKNTQTRKGYIAAEVLLANRTKFGYPVSGMFFVVQEKSWCDARECTLWLSESWRFRPNHGSVIKQRHSILVLDDFRCHRSESFVKDLRRRTNTTVILIPGGLTPLLQPLDRMLNKEMKRLMRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQYMASAIADPKTGKLQPPGRGLVSTRYKESWAAITPETVKMCFKVCGLTLALDGSED 487          
BLAST of mRNA_P-littoralis_Contig1196.3.1 vs. uniprot
Match: A0A6H5KRZ1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ1_9PHAE)

HSP 1 Score: 390 bits (1003), Expect = 3.610e-130
Identity = 207/327 (63.30%), Postives = 226/327 (69.11%), Query Frame = 1
Query:   61 FSIRRRTSVGQKLPTGHEGMAWATVMKLRQALLKRA---------------------------ESVAEQVFEELGNMDQTPVQHEMPVETTLEKRGAKDARISTGGKEKKRFTLCLAVMADGGKVPLRIIFKGTPFIPPTKSGKGKSTQPRKG-----------------------------WCDARECTLWLTESWKLRPNNGSIIKQRPSILVLDDFKCHKDEGFIADLLKRANTIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTATAVPDTRTGKLKPPGRGQVSTWCKQAWAQITPELVKTCFKICGLTLALDGSED 873
            F+IRR TSVGQKLP GHEGMAWAT+MKLR+ALL+RA                           E V +++FEELGNMDQTPVQHE PVE  L KR     R       ++RFTLCLAV ADG KVPLRIIFKGTPF+PP   GKGK+TQPRK                              WCD REC LW+ +SWKLRPNNGSI++QR  ILVLDDFKCHKD+GFIA L + ANTIVI IPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTA A  D +TGKL PPGRG V+TWCK AWA ITPE  KTCFKICGLTLALDGSED
Sbjct:  168 FNIRRCTSVGQKLPKGHEGMAWATLMKLRKALLERAGKIYAQRYPPAPGENPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHETPVER-LWKR---PVRRMPASPPEERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETAKTCFKICGLTLALDGSED 490          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1196.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K6L9_9PHAE2.400e-15067.44DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JUK2_9PHAE5.180e-14862.47DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KE45_9PHAE4.920e-14761.62DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K8Y4_9PHAE1.930e-14567.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHT8_9PHAE4.000e-14465.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTG5_9PHAE3.200e-14164.49DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KRZ8_9PHAE2.220e-13963.76DDE-1 domain-containing protein n=3 Tax=Ectocarpus... [more]
A0A6H5JQM5_9PHAE5.370e-13663.08DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K583_9PHAE3.080e-13056.63Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KRZ1_9PHAE3.610e-13063.30DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1196contigP-littoralis_Contig1196:50430..51812 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FXD3
Preferred namePOGK
PFAMsBrkDBD,DDE_1,HTH_Tnp_Tc5,KRAB
Model size873
Max annot lvl2759|Eukaryota
KEGG koko:K09228
Hectar predicted targeting categoryother localisation
Exons4
Evalue9.52e-98
EggNOG OGsKOG3105@1|root,KOG3105@2759|Eukaryota
DescriptionDNA binding
Cds size873
COG categoryCH
BRITEko00000,ko03000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789503.2970853-CDS-P-littoralis_Contig1196:50429..505981680789503.2970853-CDS-P-littoralis_Contig1196:50429..50598Pylaiella littoralis U1_48CDSP-littoralis_Contig1196 50430..50598 +
1680789503.307869-CDS-P-littoralis_Contig1196:50679..508051680789503.307869-CDS-P-littoralis_Contig1196:50679..50805Pylaiella littoralis U1_48CDSP-littoralis_Contig1196 50680..50805 +
1680789503.3199956-CDS-P-littoralis_Contig1196:51147..512891680789503.3199956-CDS-P-littoralis_Contig1196:51147..51289Pylaiella littoralis U1_48CDSP-littoralis_Contig1196 51148..51289 +
1680789503.3292582-CDS-P-littoralis_Contig1196:51376..518121680789503.3292582-CDS-P-littoralis_Contig1196:51376..51812Pylaiella littoralis U1_48CDSP-littoralis_Contig1196 51377..51812 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1196.3.1prot_P-littoralis_Contig1196.3.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1196 50430..51812 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1196.3.1

>prot_P-littoralis_Contig1196.3.1 ID=prot_P-littoralis_Contig1196.3.1|Name=mRNA_P-littoralis_Contig1196.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=291bp
SEEFRAKFNNWYQRFCKRRGFSIRRRTSVGQKLPTGHEGMAWATVMKLRQ
ALLKRAESVAEQVFEELGNMDQTPVQHEMPVETTLEKRGAKDARISTGGK
EKKRFTLCLAVMADGGKVPLRIIFKGTPFIPPTKSGKGKSTQPRKGWCDA
RECTLWLTESWKLRPNNGSIIKQRPSILVLDDFKCHKDEGFIADLLKRAN
TIVILIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTATAVPDTRTGKLK
PPGRGQVSTWCKQAWAQITPELVKTCFKICGLTLALDGSED
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mRNA from alignment at P-littoralis_Contig1196:50430..51812+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1196.3.1 ID=mRNA_P-littoralis_Contig1196.3.1|Name=mRNA_P-littoralis_Contig1196.3.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1383bp|location=Sequence derived from alignment at P-littoralis_Contig1196:50430..51812+ (Pylaiella littoralis U1_48)
TCAGAGGAGTTCAGGGCGAAGTTCAACAACTGGTACCAGCGTTTCTGCAA GCGCCGCGGGTTTAGTATCCGCCGGCGTACCAGCGTGGGACAGAAGCTGC CCACAGGACACGAGGGCATGGCGTGGGCGACGGTGATGAAGCTTCGGCAG GCTCTCCTGAAGCGTGCTGGTGAGATCTACGAGAAGCGCAACCCATCTCC GCCCGGCGAGAGCCCCACCAAAGGGGAGGACCTGACTTCCGAGCAGCTAG AGTCGGTGGCCGAGCAAGTTTTCGAAGAACTCGGCAACATGGACCAGACG CCCGTCCAGCACGAGATGCCGGTCGAGACGACTCTGGAGAAGCGTGGTGC CAAGGATGCTCGCATCAGCACCGGCGGTACGAGTCTTTTACTGCTGCTGT TTATTTTTTGTGTACTCGGCATCATTTTATATTTTGGTCTGCTGCTGTTT ATTTTTTGTGTAAAATATTCGGCATCATTTTGTATTTCGTCTACTGCTGT TTATTTTTTGTGTACTCGGCATCATTTTATATTTTTCTACTGCTCTTTAT TTTTTGTGTACTCGGCATCATTTTATATTTTGGTCTGCTGCTGTTTAATT TTTTTGATGCTGTTGTTTGTCGGTGTTTGGTCTCTCTCTTATCCACATAA AAAAACACGAAGGTGAAAGATGAAGTGAACGTTCCTCTATCCCCCGATTT GTACTGATTCCCTCACAGGCAAGGAAAAGAAGCGCTTCACGCTCTGTCTT GCTGTCATGGCAGACGGCGGCAAGGTTCCACTGCGCATCATCTTCAAGGG CACCCCGTTCATCCCGCCGACCAAGTCGGGGAAGGGCAAGAGCACTCAGC CGCGGAAGGGGTCCATCGCGGCAGAGATTGCCCCCGCGAATCGAACCCGC AACGGGCACCCCGCCGGCGGCATGTCGTTTGGAGTGCAGGATAAGAGCTG GTGCGACGCGCGGGAGTGCACCCTGTGGCTCACGGAGAGCTGGAAGCTGC GCCCCAACAACGGCAGCATCATCAAGCAGCGACCAAGCATCTTGGTCTTG GACGACTTCAAGTGCCACAAAGACGAGGGTTTCATCGCCGACCTCCTGAA GAGAGCCAACACCATCGTCATCCTGATCCCGGGCGGTCTGACTCCTCTGC TCCAGCCGCTGGACCGCATGCTCAACAAGCAGATGAAGCGGCTGCTGCgG GGGATGTACACCGCCCACACCGCCACAGCGGTCCCCGACACCAGGACGGG CAAGCTGAAGCCGCCGGGACGTGGGCAGGTGTCGACGTGGTGCAAGCAGG CGTGGGCACAGATCACTCCGGAGCTGGTCAAGACTTGCTTCAAGATCTGC GGGCTCACGCTTGCTCTCGATGGCAGCGAGGAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig1196:50430..51812+

>mRNA_P-littoralis_Contig1196.3.1 ID=mRNA_P-littoralis_Contig1196.3.1|Name=mRNA_P-littoralis_Contig1196.3.1|organism=Pylaiella littoralis U1_48|type=CDS|length=873bp|location=Sequence derived from alignment at P-littoralis_Contig1196:50430..51812+ (Pylaiella littoralis U1_48)
TCAGAGGAGTTCAGGGCGAAGTTCAACAACTGGTACCAGCGTTTCTGCAA
GCGCCGCGGGTTTAGTATCCGCCGGCGTACCAGCGTGGGACAGAAGCTGC
CCACAGGACACGAGGGCATGGCGTGGGCGACGGTGATGAAGCTTCGGCAG
GCTCTCCTGAAGCGTGCTGAGTCGGTGGCCGAGCAAGTTTTCGAAGAACT
CGGCAACATGGACCAGACGCCCGTCCAGCACGAGATGCCGGTCGAGACGA
CTCTGGAGAAGCGTGGTGCCAAGGATGCTCGCATCAGCACCGGCGGCAAG
GAAAAGAAGCGCTTCACGCTCTGTCTTGCTGTCATGGCAGACGGCGGCAA
GGTTCCACTGCGCATCATCTTCAAGGGCACCCCGTTCATCCCGCCGACCA
AGTCGGGGAAGGGCAAGAGCACTCAGCCGCGGAAGGGCTGGTGCGACGCG
CGGGAGTGCACCCTGTGGCTCACGGAGAGCTGGAAGCTGCGCCCCAACAA
CGGCAGCATCATCAAGCAGCGACCAAGCATCTTGGTCTTGGACGACTTCA
AGTGCCACAAAGACGAGGGTTTCATCGCCGACCTCCTGAAGAGAGCCAAC
ACCATCGTCATCCTGATCCCGGGCGGTCTGACTCCTCTGCTCCAGCCGCT
GGACCGCATGCTCAACAAGCAGATGAAGCGGCTGCTGCgGGGGATGTACA
CCGCCCACACCGCCACAGCGGTCCCCGACACCAGGACGGGCAAGCTGAAG
CCGCCGGGACGTGGGCAGGTGTCGACGTGGTGCAAGCAGGCGTGGGCACA
GATCACTCCGGAGCTGGTCAAGACTTGCTTCAAGATCTGCGGGCTCACGC
TTGCTCTCGATGGCAGCGAGGAC
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