mRNA_P-littoralis_Contig775.23.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig775.23.1 vs. uniprot
Match: A0A6H5L481_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L481_9PHAE) HSP 1 Score: 278 bits (711), Expect = 1.370e-85 Identity = 162/319 (50.78%), Postives = 205/319 (64.26%), Query Frame = 1
Query: 268 MNLEKVMPLPLN*SAYTQTSVELVLKGYGK-NKKQLLMHMQNICTVYACLAVKRNAGIVGTTVRHAAAAKGYKEIAVPGFFRWAKDEGIVLPGWLTMDFMGRTTL*GDPVLFQDGKKL*SRFDEAFRIMKRDYNPIWDRFVRGQPGNNLPSGHTGDDVIDNLLDGLCARNAVSAEAPVLEKDLVESPPGGGGAKPGTEKENAGRGGARETLQESVDGGAAEK----QQGEAGKGDGETDGIKQE--PEDGDGGXXXXXXXXX--LXGESGDYPARPTNWMSPYLITYCLVGRPSDSKDADLRTARVTSGPRNRSGKRKA 1197
+N+++V+PLPL + Y +TS+ L L+ KQ ++ +QN+C VY+CLAVKRNAG+VGT + AAAA+GY+EIAVPGFFRWA+D I P LTM +G T+ G PVL+ +GKKL ++FD A MK+ NPIWDR+V+GQPG NLPSG TGDD I+NLLDGL ++ SAE+PV E DLVES P G K +E DGGA + Q+GE GK T IK+E P+D D XXXX G+ G+YP RP WM P L+ YC +GRPSDS+D DL TAR TSGP R KRK+
Sbjct: 3 INVDEVLPLPLVYNDYVKTSINLALENKKLFTLKQQMLFIQNVCIVYSCLAVKRNAGVVGTEAKRAAAAQGYREIAVPGFFRWARDNDITFPSELTMKRIGATSTDGAPVLYTNGKKLWTKFDAAMLKMKKFCNPIWDRYVKGQPGGNLPSGQTGDDAINNLLDGLYSKTKGSAESPVQEDDLVESTPAADGGK---------------APEEKADGGAPNEDKPDQEGEKGK----TAVIKKERNPDDDDASVXXXXVPSEDEQAGDDGEYPPRPDGWMHPLLLIYCFIGRPSDSEDPDLATARKTSGPPKRGSKRKS 302
BLAST of mRNA_P-littoralis_Contig775.23.1 vs. uniprot
Match: D7FPI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI6_ECTSI) HSP 1 Score: 176 bits (445), Expect = 3.680e-49 Identity = 98/203 (48.28%), Postives = 127/203 (62.56%), Query Frame = 1
Query: 268 MNLEK---VMPLPLN*SAYTQTSVELVL--KGYGKNKKQLLMHMQNICTVYACLAVKRNAGIVGTTVRHAAAAKGYKEIAVPGFFRWAK-----DEGIVLPGWLTMDFMGRTTL*GDPVLFQDGKKL*SRFDEAFRIMKRDYNPIWDRFVRGQPGNNLPSGHTGDDVIDNLLDGL--CARNAVSAEAPVLEKDLVESPPGGGG 840
MN +K V LPL ++Y +T + ++ + G +LL H+QN+C VYACL VKRNAGIV T +HAAAAKGYK+IAV GFF+W K D+ P WLT + MGRT++ GD VLF GKKL RFD R +K+ YNP+WD FV GQPG+ LPSG +D I+ LL+G+ N + E P+ +L E G GG
Sbjct: 1 MNAKKRDGVQSLPLEFNSYAETVISMLRDRRSSGLTDAKLLKHLQNVCIVYACLTVKRNAGIVSTQAKHAAAAKGYKDIAVLGFFKWLKENLEADQYFSQP-WLTFEVMGRTSMSGDAVLFTHGKKLWKRFDNIMRALKKFYNPVWDSFVEGQPGDQLPSGSQDEDAIEYLLNGVYHTISNTGNEENPI---ELEERRGGEGG 199
BLAST of mRNA_P-littoralis_Contig775.23.1 vs. uniprot
Match: A0A6H5JUY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUY9_9PHAE) HSP 1 Score: 174 bits (441), Expect = 4.240e-49 Identity = 83/141 (58.87%), Postives = 105/141 (74.47%), Query Frame = 1
Query: 268 MNLEKVMPLPLN*SAYTQTSVELVLKGYGKNKKQLLMHMQNICTVYACLAVKRNAGIVGTTVRHAAAAKGYKEIAVPGFFRWAKDEGIVLP-GWLTMDFMGRTTL*GDPVLFQDGKKL*SRFDEAFRIMKRDYNPIWDRFV 687
M L+ V PLPL + Y + ++EL+L G G ++ +LL H+QN+C VYACLAVKRNAGIV T ++ AAAKGYK+IAVPGFF+W K+ GIV+ WLT + MGRT+L G PVLF DGKKL RFD+ R MK+ YN +WDR V
Sbjct: 4 MKLDNVQPLPLEFNGYVEGTLELLLGGKGLSQIKLLKHLQNVCIVYACLAVKRNAGIVSTEAKYKAAAKGYKDIAVPGFFKWLKENGIVIKQAWLTFEVMGRTSLNGAPVLFTDGKKLWKRFDKVMREMKKTYNKVWDRCV 144
BLAST of mRNA_P-littoralis_Contig775.23.1 vs. uniprot
Match: A0A6H5JM89_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM89_9PHAE) HSP 1 Score: 141 bits (355), Expect = 5.280e-33 Identity = 116/371 (31.27%), Postives = 161/371 (43.40%), Query Frame = 1
Query: 346 GYGKNKKQLLMHMQNICTVYACLAVKRNAGIVGTTVRHAAAAKGYKEIAVPGFFRWAKDEG-IVLPGWLTMDFMGRT---------------------------TL*GDPVLFQDGKKL*SRFDEAFRIMKRDYNPIWDRFVRGQPGNNLPSGHTGDDVIDNLLDGL----CARNAVSAEAPVLEKDLVE------------------------SPPG---------GGGAKPGTEKE---NAGRGGARETLQESVDGGAAEKQQG---EAGKGDGETDGIKQEPEDGDGGXXXXXXXXXLXGESGDYPARPTNWMSPYLITYCLVGRPSDSKDADLRTARVTSGPRNRSG---KRKAGLRATTSSGSSNE 1236
G G K+++ +Q + Y + VKRNAG + + R A K YK+ VPGF +W +EG P WLTM+ MGR +L +P L++DGKK+ +R+ +AFR +++D NP++D+ + QPG PSG D +D LL L C + E EK+ + S G GGGA G ++E AGR E + S DGGA + Q E K GE D EPE YP RP NWM Y +T+C GRPS+S+D DL + SGP S K+KA L +++ GS +E
Sbjct: 27 GDGLTMKEVVRQLQTVALCYTAMGVKRNAGEIDSKKREALLLKAYKDDVVPGFLKWLSEEGDCTTPPWLTMEMMGRVAVHTCRHQWHRNAGAEEQGERETAATESLYEEPKLYKDGKKIWARYLDAFRDIRKDANPVYDKTIGDQPGGTPPSGEQYADQLDELLQALWEYQCREKNKTVEVTAEEKEFLRARGPSAAKGXXXXXXXXXXXXXLSSTDGEVVQGTEKEGGGADAGKDEEVAAGAGRAAGSEGIDGSGDGGAGREGQPMEQEQPKTPGEEDDGGSEPE-----------------SVVQYPERPPNWMPYYFLTFCFFGRPSNSEDTDL-AMKAGSGPSGDSRPRKKKKASLGSSSDGGSGSE 379
BLAST of mRNA_P-littoralis_Contig775.23.1 vs. uniprot
Match: A0A6H5KDP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDP2_9PHAE) HSP 1 Score: 129 bits (325), Expect = 6.180e-33 Identity = 62/107 (57.94%), Postives = 81/107 (75.70%), Query Frame = 1
Query: 268 MNLEKVMPLPLN*SAYTQTSVELVLKGYGKNKKQLLMHMQNICTVYACLAVKRNAGIVGTTVRHAAAAKGYKEIAVPGFFRWAKDEGIVLP-GWLTMDFMGRTTL*G 585
M L+ V PLPL + Y + ++EL+L G G ++ +LL H+QN+C VYACLAVKRNAGIV T ++ AAAKGYK+IAVPGFF+W K+ GIV+ WLT + MGRT+L G
Sbjct: 4 MKLDNVQPLPLEFNGYVEGTLELLLGGKGLSQIKLLKHLQNVCIVYACLAVKRNAGIVSTEAKYKAAAKGYKDIAVPGFFKWLKENGIVIKQAWLTFEVMGRTSLNG 110
BLAST of mRNA_P-littoralis_Contig775.23.1 vs. uniprot
Match: A0A6H5JZP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZP4_9PHAE) HSP 1 Score: 129 bits (325), Expect = 5.100e-32 Identity = 62/107 (57.94%), Postives = 81/107 (75.70%), Query Frame = 1
Query: 268 MNLEKVMPLPLN*SAYTQTSVELVLKGYGKNKKQLLMHMQNICTVYACLAVKRNAGIVGTTVRHAAAAKGYKEIAVPGFFRWAKDEGIVLP-GWLTMDFMGRTTL*G 585
M L+ V PLPL + Y + ++EL+L G G ++ +LL H+QN+C VYACLAVKRNAGIV T ++ AAAKGYK+IAVPGFF+W K+ GIV+ WLT + MGRT+L G
Sbjct: 4 MKLDNVQPLPLEFNGYVEGTLELLLGGKGLSQIKLLKHLQNVCIVYACLAVKRNAGIVSTEAKYKAAAKGYKDIAVPGFFKWLKENGIVIKQAWLTFEVMGRTSLNG 110
BLAST of mRNA_P-littoralis_Contig775.23.1 vs. uniprot
Match: D7FSK1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK1_ECTSI) HSP 1 Score: 129 bits (325), Expect = 1.150e-30 Identity = 79/189 (41.80%), Postives = 103/189 (54.50%), Query Frame = 1
Query: 643 RIMKRDYNPIWDRFVRGQPGNNLPSGHTGDDVIDNLLDGLCARNAVSAEAPV----LEKDLVESPPGGGGAKPGTEKENAGRGGARETLQESVDGGAAEKQQGEAGKGDGETDGIKQEPEDGDGGXXXXXXXXXLXGESGDYPARPTNWMSPYLITYCLVGRPSDSKDADLRTARVTSGPRNRSGKRKA 1197
R MK+ YN +WD V GQPG NLPSG D +D LL+G+ + +AE P+ ++ DL GG A ++ GR + DGG AE+ +G A GIK+EP G+ G + G YP RP WM PYL+TYCL+GRPS S+D DLRT R TSGP+ R GK+K+
Sbjct: 2 REMKKTYNKVWDSLVEGQPGENLPSGEQEGDALDYLLNGVYHLSTGNAEDPIELEDIDDDLDNDADDGGAAG----LQDNGRNDGESPPGQVEDGGGAEESEGGAPA----VGGIKEEPAVGNQGSGDGAPSDNIEEADGGYPDRPDKWMHPYLLTYCLIGRPSSSEDPDLRTTRKTSGPKGRGGKQKS 182
BLAST of mRNA_P-littoralis_Contig775.23.1 vs. uniprot
Match: A0A6H5JJR6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR6_9PHAE) HSP 1 Score: 119 bits (299), Expect = 8.460e-29 Identity = 70/172 (40.70%), Postives = 92/172 (53.49%), Query Frame = 1
Query: 268 MNLEKVMPLPLN*SAYTQTSVELVL--KGYGKNKKQLLMHMQNICTVYACLAVKRNAGIVGTTVRHAAAAKGYKEIAVPGFFRWAK-----DEGIVLPGWLTMDFMGRTTL*GDPVLFQDGKKL*SRFDEAFRIMKRDYNPIWDRFVRGQPGNNLPSGHTGDDVIDNLLDGL 762
M L+ V LPL ++Y +T + ++ + G +LL H+QN+C VYACLAVKRNAGIV T +HAA AKGYK+IAVPGFF+W K D+ P WLT + MGRT++ G GQPG+ LPSG +D I+ LL G+
Sbjct: 4 MKLDGVQSLPLEFNSYAETVISMLRDKRSSGLTDTKLLKHLQNVCIVYACLAVKRNAGIVSTQAKHAAVAKGYKDIAVPGFFKWLKENLEADQYFSQP-WLTFEVMGRTSMSG-----------------------------------GQPGDQLPSGSQDEDAIEYLLHGV 139
BLAST of mRNA_P-littoralis_Contig775.23.1 vs. uniprot
Match: A0A6H5K5X3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5X3_9PHAE) HSP 1 Score: 119 bits (298), Expect = 6.870e-26 Identity = 63/131 (48.09%), Postives = 85/131 (64.89%), Query Frame = 1
Query: 268 MNLEKVMPLPLN*SAYTQTSVELVL-KGYGKNKKQLLMHMQNICTVYACLAVKRNAGIVGTTVRHAAAAKGYKEIAVPGFFRWAKD----EGIVLPGWLTMDFMGRTTL*GDPVLFQDGKKL*SRFDEAFR 645
M L+ V LPL ++Y + + ++ + G +LL H+QN C VYACLAVKRNAGIV T RHAAAA+GYK+IAVPGF + ++ E L WLT + MG++++ G VLF DG+KL RFD+ R
Sbjct: 228 MKLDGVQSLPLKFNSYAEAVISMLRDRSSGLTDAKLLKHLQNGCIVYACLAVKRNAGIVSTQARHAAAAQGYKDIAVPGFIKRLQENLDKEDFFLQPWLTCEVMGKSSMKGGAVLFTDGEKLWKRFDKILR 358
BLAST of mRNA_P-littoralis_Contig775.23.1 vs. uniprot
Match: A0A6H5JPS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPS0_9PHAE) HSP 1 Score: 119 bits (299), Expect = 8.780e-26 Identity = 63/131 (48.09%), Postives = 86/131 (65.65%), Query Frame = 1
Query: 268 MNLEKVMPLPLN*SAYTQTSVELVL-KGYGKNKKQLLMHMQNICTVYACLAVKRNAGIVGTTVRHAAAAKGYKEIAVPGFFRWAKD----EGIVLPGWLTMDFMGRTTL*GDPVLFQDGKKL*SRFDEAFR 645
M L+ V LPL ++Y +T V ++ + G +LL H+QN VYACLAVKRNAGIV T +HAAAA+GYK+IAVP FF+W ++ E L WLT + MG+T++ G VLF +G+K+ RFD+ R
Sbjct: 400 MKLDGVQSLPLEFNSYAETVVSMLRDRSSGLTDAKLLKHLQNGRIVYACLAVKRNAGIVSTQAKHAAAAQGYKDIAVPSFFKWLQENLDKEDSFLQPWLTFEVMGKTSMKGGAVLFTNGEKMWKRFDKILR 530 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig775.23.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig775.23.1 >prot_P-littoralis_Contig775.23.1 ID=prot_P-littoralis_Contig775.23.1|Name=mRNA_P-littoralis_Contig775.23.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=205bp MKRDYNPIWDRFVRGQPGNNLPSGHTGDDVIDNLLDGLCARNAVSAEAPVback to top mRNA from alignment at P-littoralis_Contig775:82288..84866+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig775.23.1 ID=mRNA_P-littoralis_Contig775.23.1|Name=mRNA_P-littoralis_Contig775.23.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2579bp|location=Sequence derived from alignment at P-littoralis_Contig775:82288..84866+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig775:82288..84866+ >mRNA_P-littoralis_Contig775.23.1 ID=mRNA_P-littoralis_Contig775.23.1|Name=mRNA_P-littoralis_Contig775.23.1|organism=Pylaiella littoralis U1_48|type=CDS|length=615bp|location=Sequence derived from alignment at P-littoralis_Contig775:82288..84866+ (Pylaiella littoralis U1_48)back to top |