prot_P-littoralis_Contig773.19.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig773.19.1
Unique Nameprot_P-littoralis_Contig773.19.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length182
Homology
BLAST of mRNA_P-littoralis_Contig773.19.1 vs. uniprot
Match: A0A6H5KPR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPR3_9PHAE)

HSP 1 Score: 309 bits (791), Expect = 9.550e-105
Identity = 148/178 (83.15%), Postives = 162/178 (91.01%), Query Frame = 0
Query:    1 MMWLANQTRPDILNAVRAVARYSHAPKLVHWRAALHVLMYVRGTTDFGITFQRGVPGGEHMELFVDSDFASKATDRRSVSGAVVMFAGACLMYLSRTQKSVTLSSTEAEYVALAEGMKEAIFLRYLWNFIFPDLDVGCTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARG 178
            +MWLANQTRPDILNAVRAVARYSHAPK +HW AALHVLMYVR T+ +GITFQRG  GG+HMEL VDSDFA+KATDRRSVSGA+VM AGAC+MYL R QKSVTLSSTEAEY+A+ +GMKEAIFLRYLW FIFP  DVGCT V EDNVGA++LASNPATTPNSKHIDI+HHFIRERVARG
Sbjct:   28 LMWLANQTRPDILNAVRAVARYSHAPKRLHWEAALHVLMYVRFTSGYGITFQRGTVGGDHMELLVDSDFANKATDRRSVSGALVMIAGACVMYLCRMQKSVTLSSTEAEYMAMFDGMKEAIFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARG 205          
BLAST of mRNA_P-littoralis_Contig773.19.1 vs. uniprot
Match: A0A6H5JWG1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWG1_9PHAE)

HSP 1 Score: 318 bits (815), Expect = 8.700e-104
Identity = 152/178 (85.39%), Postives = 166/178 (93.26%), Query Frame = 0
Query:    1 MMWLANQTRPDILNAVRAVARYSHAPKLVHWRAALHVLMYVRGTTDFGITFQRGVPGGEHMELFVDSDFASKATDRRSVSGAVVMFAGACLMYLSRTQKSVTLSSTEAEYVALAEGMKEAIFLRYLWNFIFPDLDVGCTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARG 178
            +MWLANQTRPDILNAVRAVARYSHAPK +HW AALHVLMYVR T+ +GITFQRG  GG+HMELFVDSDFA+KATDRRSVSGA+VMFAGAC+MYL RTQKSVTLSSTEAEYVA+++GMKEAIFLRYLW FIFP  DVGCT V EDNVGA++LASNPATTPNSKHIDI+HHFIRERVARG
Sbjct:  362 LMWLANQTRPDILNAVRAVARYSHAPKRLHWEAALHVLMYVRFTSGYGITFQRGTVGGDHMELFVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEAIFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARG 539          
BLAST of mRNA_P-littoralis_Contig773.19.1 vs. uniprot
Match: A0A6H5JHE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHE6_9PHAE)

HSP 1 Score: 306 bits (783), Expect = 1.370e-102
Identity = 152/193 (78.76%), Postives = 164/193 (84.97%), Query Frame = 0
Query:    1 MMWLANQTRPDILNAVRAVARYSHAPKLVHWRAALHVLMYVRGTTDFGITFQRGVPGGEHMELFVDSDFASKATDRRSVSGAVVMFAGACLMYLSRTQKSVTLSSTEAE-------------YVALAEGMKEAIFLRYLWNFIFPDLDVGCTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARGSS 180
            +MWLANQTRPDILNAVRAVARYSHAPK +HW AALHVLMYVR T   GITFQRG  GG+HMELFVDSDFA+KATDRRSVSGA+VMFAGAC+MYL RTQKSVTLSSTEAE             YVA+++GMKEAIFLRYLW FIFP  DVGCT V EDNVGA++LASNPATTPNSKHIDI+HHFI ERVARG S
Sbjct:  107 LMWLANQTRPDILNAVRAVARYSHAPKRLHWEAALHVLMYVRFTRGNGITFQRGTEGGDHMELFVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEXXXXXXXXXXXXEYVAMSDGMKEAIFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIHERVARGGS 299          
BLAST of mRNA_P-littoralis_Contig773.19.1 vs. uniprot
Match: A0A6H5KGK7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGK7_9PHAE)

HSP 1 Score: 318 bits (815), Expect = 2.020e-101
Identity = 152/178 (85.39%), Postives = 166/178 (93.26%), Query Frame = 0
Query:    1 MMWLANQTRPDILNAVRAVARYSHAPKLVHWRAALHVLMYVRGTTDFGITFQRGVPGGEHMELFVDSDFASKATDRRSVSGAVVMFAGACLMYLSRTQKSVTLSSTEAEYVALAEGMKEAIFLRYLWNFIFPDLDVGCTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARG 178
            +MWLANQTRPDILNAVRAVARYSHAPK +HW AALHVLMYVR T+ +GITFQRG  GG+HMELFVDSDFA+KATDRRSVSGA+VMFAGAC+MYL RTQKSVTLSSTEAEYVA+++GMKEAIFLRYLW FIFP  DVGCT V EDNVGA++LASNPATTPNSKHIDI+HHFIRERVARG
Sbjct:  586 LMWLANQTRPDILNAVRAVARYSHAPKRLHWEAALHVLMYVRFTSGYGITFQRGTVGGDHMELFVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEAIFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARG 763          
BLAST of mRNA_P-littoralis_Contig773.19.1 vs. uniprot
Match: A0A6H5K5L3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5L3_9PHAE)

HSP 1 Score: 308 bits (788), Expect = 6.990e-100
Identity = 149/178 (83.71%), Postives = 162/178 (91.01%), Query Frame = 0
Query:    1 MMWLANQTRPDILNAVRAVARYSHAPKLVHWRAALHVLMYVRGTTDFGITFQRGVPGGEHMELFVDSDFASKATDRRSVSGAVVMFAGACLMYLSRTQKSVTLSSTEAEYVALAEGMKEAIFLRYLWNFIFPDLDVGCTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARG 178
            +MWLANQTRPDILNAVRAVARYSHAPK +HW AALHVLMYVR T+  GITFQRG  GG+HMEL VDSDFA+KATDRRSVSGA+VMFAGAC+MYL RTQKSVTLSSTEAEYVA+++GM EAIFLRYLW  IF  LDVGCT V EDNVGA++LASNPATTPNSKHIDI+HHFIRERVARG
Sbjct:  349 LMWLANQTRPDILNAVRAVARYSHAPKRLHWEAALHVLMYVRFTSGCGITFQRGTVGGDHMELLVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMTEAIFLRYLWKIIFSVLDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARG 526          
BLAST of mRNA_P-littoralis_Contig773.19.1 vs. uniprot
Match: A0A6H5L5Q2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Q2_9PHAE)

HSP 1 Score: 298 bits (763), Expect = 6.530e-99
Identity = 138/178 (77.53%), Postives = 163/178 (91.57%), Query Frame = 0
Query:    1 MMWLANQTRPDILNAVRAVARYSHAPKLVHWRAALHVLMYVRGTTDFGITFQRGVPGGEHMELFVDSDFASKATDRRSVSGAVVMFAGACLMYLSRTQKSVTLSSTEAEYVALAEGMKEAIFLRYLWNFIFPDLDVGCTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARG 178
            +MWLANQTRPDILNAVRAVARYS+APK VHW+AALH++MY+R T+ +GITFQRG  GG  +E++VDSD+ASKATDRRSVSG VVM AG+C+ + SRTQKSVTLSSTEAEY A+A+GMKEAIFLRYLW+FIFPD DVGCT++ EDNVGA++LA+NPATTPNSKHID++HHFIRERV RG
Sbjct:  132 LMWLANQTRPDILNAVRAVARYSYAPKSVHWKAALHIVMYIRCTSAYGITFQRGTAGGVSLEVYVDSDYASKATDRRSVSGGVVMCAGSCVSFFSRTQKSVTLSSTEAEYAAMADGMKEAIFLRYLWSFIFPDGDVGCTVIKEDNVGALHLANNPATTPNSKHIDVRHHFIRERVDRG 309          
BLAST of mRNA_P-littoralis_Contig773.19.1 vs. uniprot
Match: A0A6H5KAC2_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAC2_9PHAE)

HSP 1 Score: 318 bits (815), Expect = 2.370e-97
Identity = 152/178 (85.39%), Postives = 166/178 (93.26%), Query Frame = 0
Query:    1 MMWLANQTRPDILNAVRAVARYSHAPKLVHWRAALHVLMYVRGTTDFGITFQRGVPGGEHMELFVDSDFASKATDRRSVSGAVVMFAGACLMYLSRTQKSVTLSSTEAEYVALAEGMKEAIFLRYLWNFIFPDLDVGCTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARG 178
            +MWLANQTRPDILNAVRAVARYSHAPK +HW AALHVLMYVR T+ +GITFQRG  GG+HMELFVDSDFA+KATDRRSVSGA+VMFAGAC+MYL RTQKSVTLSSTEAEYVA+++GMKEAIFLRYLW FIFP  DVGCT V EDNVGA++LASNPATTPNSKHIDI+HHFIRERVARG
Sbjct: 1662 LMWLANQTRPDILNAVRAVARYSHAPKRLHWEAALHVLMYVRFTSGYGITFQRGTVGGDHMELFVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEAIFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARG 1839          
BLAST of mRNA_P-littoralis_Contig773.19.1 vs. uniprot
Match: A0A6H5JMP2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP2_9PHAE)

HSP 1 Score: 312 bits (800), Expect = 5.720e-97
Identity = 150/178 (84.27%), Postives = 164/178 (92.13%), Query Frame = 0
Query:    1 MMWLANQTRPDILNAVRAVARYSHAPKLVHWRAALHVLMYVRGTTDFGITFQRGVPGGEHMELFVDSDFASKATDRRSVSGAVVMFAGACLMYLSRTQKSVTLSSTEAEYVALAEGMKEAIFLRYLWNFIFPDLDVGCTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARG 178
            +MWLANQTRPDILNAVRAVARYSHAPK +HW AALHVLMYVR T+ +GITFQRG  GG+HMELFVDSDFA+KATDRRSVSGA+VMFAGAC+MYL RTQKS TLSSTEAEYVA+++GMKEAIFLRYLW FIFP  DVGCT V EDNVGA++LASNPATTPNSK IDI+HHFIRERVARG
Sbjct:  890 LMWLANQTRPDILNAVRAVARYSHAPKRLHWEAALHVLMYVRFTSGYGITFQRGTVGGDHMELFVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSGTLSSTEAEYVAMSDGMKEAIFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKQIDIRHHFIRERVARG 1067          
BLAST of mRNA_P-littoralis_Contig773.19.1 vs. uniprot
Match: A0A6H5KAQ1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAQ1_9PHAE)

HSP 1 Score: 306 bits (783), Expect = 3.390e-95
Identity = 146/178 (82.02%), Postives = 163/178 (91.57%), Query Frame = 0
Query:    1 MMWLANQTRPDILNAVRAVARYSHAPKLVHWRAALHVLMYVRGTTDFGITFQRGVPGGEHMELFVDSDFASKATDRRSVSGAVVMFAGACLMYLSRTQKSVTLSSTEAEYVALAEGMKEAIFLRYLWNFIFPDLDVGCTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARG 178
            +MWLANQTRPDILNAVRAVARYSHAPK +HW AALHVLM+VR T+ +GITFQRG  GG+HMELFVDSDFA+KATDRRSVSGA+VMFAGAC+MYL RTQKSVTLSSTEAEYVA+++GMKEAIFLR+LW F+FP  DVGCT V EDNVGA +LAS  A+TPNSKHIDI+HHFIRERVARG
Sbjct:  778 LMWLANQTRPDILNAVRAVARYSHAPKRLHWEAALHVLMFVRFTSGYGITFQRGTVGGDHMELFVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEAIFLRHLWKFVFPGRDVGCTPVWEDNVGAFHLASKSASTPNSKHIDIRHHFIRERVARG 955          
BLAST of mRNA_P-littoralis_Contig773.19.1 vs. uniprot
Match: A0A6H5JE07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE07_9PHAE)

HSP 1 Score: 306 bits (783), Expect = 2.390e-94
Identity = 147/176 (83.52%), Postives = 160/176 (90.91%), Query Frame = 0
Query:    3 WLANQTRPDILNAVRAVARYSHAPKLVHWRAALHVLMYVRGTTDFGITFQRGVPGGEHMELFVDSDFASKATDRRSVSGAVVMFAGACLMYLSRTQKSVTLSSTEAEYVALAEGMKEAIFLRYLWNFIFPDLDVGCTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARG 178
            WLANQTRPDILNAVRAVARYSHAPK +HW AALHVLMYVR T+ +GITFQRG  GG+H ELFVDSDFA+KATDRRSVSGA+VMFAGAC+MYL RTQKSVTLSSTEAEYVA+++GMKEA FL YLW  IFP  DVGCT V EDNVGA++LASNPATTPNSKHIDI+HHFIRERVARG
Sbjct:  877 WLANQTRPDILNAVRAVARYSHAPKRLHWEAALHVLMYVRFTSGYGITFQRGTVGGDHWELFVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEATFLWYLWKIIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARG 1052          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig773.19.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KPR3_9PHAE9.550e-10583.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWG1_9PHAE8.700e-10485.39Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JHE6_9PHAE1.370e-10278.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KGK7_9PHAE2.020e-10185.39Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K5L3_9PHAE6.990e-10083.71Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L5Q2_9PHAE6.530e-9977.53Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KAC2_9PHAE2.370e-9785.39Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JMP2_9PHAE5.720e-9784.27Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KAQ1_9PHAE3.390e-9582.02Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JE07_9PHAE2.390e-9483.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 7..83
NoneNo IPR availablePANTHERPTHR11439:SF308SUBFAMILY NOT NAMEDcoord: 7..83
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 64..178
e-value: 8.87914E-46
score: 145.304

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig773contigP-littoralis_Contig773:109031..109576 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig773.19.1mRNA_P-littoralis_Contig773.19.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig773 108782..109597 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig773.19.1 ID=prot_P-littoralis_Contig773.19.1|Name=mRNA_P-littoralis_Contig773.19.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=182bp
MMWLANQTRPDILNAVRAVARYSHAPKLVHWRAALHVLMYVRGTTDFGIT
FQRGVPGGEHMELFVDSDFASKATDRRSVSGAVVMFAGACLMYLSRTQKS
VTLSSTEAEYVALAEGMKEAIFLRYLWNFIFPDLDVGCTLVHEDNVGAVY
LASNPATTPNSKHIDIKHHFIRERVARGSSG*
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