mRNA_P-littoralis_Contig1195.5.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1195.5.1
Unique NamemRNA_P-littoralis_Contig1195.5.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1195.5.1 vs. uniprot
Match: A0A6H5JU73_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU73_9PHAE)

HSP 1 Score: 585 bits (1509), Expect = 1.110e-199
Identity = 295/486 (60.70%), Postives = 356/486 (73.25%), Query Frame = 1
Query:  205 RSDSSCISWKRFQNLVLGSKGVLWKTKFIRPAETRWMVIWEGAAILEERWEQVRWLFVEWAAKVLLRTPFMSYWFKATCMLQNPLIRVHAKFCGALHKAILSWAYNWLRGEGGYFLKGPDGVPKRLPPGMRLAEVPDFSLLLLSRLIELREHPWKYFPELLYFAMQKLDDEEFEA----------------------FLQNFE-EGGGFSWEMEQRWIKWTDRHQHLPLSMARLGCSSFYEGKWVGSEKAFEHAVGQEFARALLVVLWPDAYQNVEWVRWDEEHDFREILANDLATAPTQREKDELTLGMFSKLNDETEFRQEVERYAASARGKAEVVNDDNDKGNPSPRASSFPLLWTFPLLYEWSCHLFFFAPIHQQLVESVFSKYDTCTKPCDSREIDIVRLGQFSSAQSRKIQRAHASNSEIRQAGAKAIKVARELSKAASTAVPCERQLRKRSHDVTAFLKGVNDEARFGSEWLFAGIAEE 1593
            RSDSSCISW+RFQNLV G KGV W  KFIRPAETRWMV+W+ AA+LE+RW++VRWL +EWAA  LL TPFM YWFK+ CML +PLIRVHAKFC AL K +LSWAYNW+RGEGGY L+G  GV +RLP GMRLA++ DFSLLL+ RL ELR HP KYFP+LL +A + L +EE  A                      F++NF+ E  G   EM  RW KW D HQHLP SMARL CSSF+EGKW GSEKA EHAVGQE+ARA L+ LWP+  +  EWV WDEEH++ EIL +DL+ A T  EKDELT GMFSKLN   EFR EVERY+ SAR K E+V DD D  + +PR S F ++W+FPLLYEW+ H   FAPIHQQLV+SV S YDTCT+  DSREI IVRLGQF S+QSR++QR HA+N EIR+AG K I VAREL K+A+ A+P + QLRKR  D   FL+  +++++ GS W+   + +E
Sbjct:  285 RSDSSCISWERFQNLVFGCKGVKWGCKFIRPAETRWMVVWDAAALLEDRWDEVRWLHLEWAAAKLLGTPFMDYWFKSLCMLDDPLIRVHAKFCVALRKVVLSWAYNWIRGEGGYLLEGRGGVAERLPAGMRLADIADFSLLLVERLEELRMHPKKYFPDLLAWAEKTLSEEEVSANAAQTLLLFDPVPYCPMLQLAHFMRNFQNEKSGLFREMIARWTKWMDMHQHLPYSMARLACSSFFEGKWAGSEKAIEHAVGQEYARASLLALWPELNEGAEWVGWDEEHEYLEILRDDLSEAETTEEKDELTFGMFSKLNASAEFRGEVERYSLSAREKKEIVVDD-DAESQAPRVSGFDMIWSFPLLYEWARHAILFAPIHQQLVKSVCSTYDTCTQKHDSREIGIVRLGQFRSSQSRRVQRLHATNKEIREAGDKVIAVARELKKSAAQAIPNDWQLRKRVLDTKQFLRDQSEKSKHGSNWVVRSVLKE 769          
BLAST of mRNA_P-littoralis_Contig1195.5.1 vs. uniprot
Match: A0A6H5JN38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN38_9PHAE)

HSP 1 Score: 428 bits (1101), Expect = 6.070e-143
Identity = 249/489 (50.92%), Postives = 301/489 (61.55%), Query Frame = 1
Query:  205 RSDSSCISWKRFQNLVLGSKGVLWKTKFIRPAETRWMVIWEGAAILEERWEQVRWLFVEWAAKVLLRTPFMSYWFKATCMLQNPLIRVHAKFCGALHKAILSWAYNWLRGEGGYFLKGPDGVPKRLPPGMRLAEVPDFSLLLLSRLIELREHPWKYFPELLYFAMQKLDDEEFEAFLQNFEEGGGFSWEMEQRWIKWTDRHQHLPLSMARLGCSSFYEGKWVGSEKAFEHAVGQEFARALLVVLWPDAYQNVEWVRWDEEHDFREILANDLATAPTQREKDELTLGMFSKLNDETEFRQEVERYAASARGKAEVVNDDNDKGNPSPRASSFPLLWTFPLLYEWSCHLFFFAPIHQQLVESVFSKYDTCTKPCDSREIDIVRLGQFSSAQSRKIQRAHASNSEIRQAGAKAIKVARELSKAASTAVPCERQLRKRSHDVTAFLKGVNDEARFGSEWLFAGIAEE----SESEKSAKSDDLS----ESSGD 1647
            RSDSSCISW+R +NLV  +KGV+W  KFIRPAETRWMVI + AA+LEERW++                        +T ML +PLIRVHAKFC AL KA+LSWAYNW+RGEGGYFL+G  GV +RLPPGMRLAE  DFSLLL+ RL                                          E  QR            +SM RL CSSFYEGKW GSE+ FEHAVGQE ARALL+  WP+ Y++ EW  W+E++ FRE               ++LTLGMFSKL    EFR+E+ERYAASA  K +VV+D  D  N +PR S F ++WTFP LYEW+CH  FFAPIHQQLVES  S YDT T+  DSRE+DIVRLGQFSS  SR+++R  +SN EIR  G KAI VA  L K+AS AVP ERQLR   HD   FLK  +++++ GS+W+   + EE    SE  +S  S++LS    E SGD
Sbjct:   36 RSDSSCISWRRVKNLVFRAKGVMWICKFIRPAETRWMVIRDAAALLEERWDE------------------------STYMLDDPLIRVHAKFCVALRKAVLSWAYNWIRGEGGYFLEGTGGVAERLPPGMRLAEAADFSLLLVKRL------------------------------------------ERSQR------------MSMTRLACSSFYEGKWAGSEEGFEHAVGQEVARALLLAFWPNRYESTEWKGWEEQNTFRE---------------NKLTLGMFSKLAASAEFREELERYAASAHEKKKVVSDV-DVENQTPRVSGFDMIWTFPQLYEWACHAVFFAPIHQQLVESSSSTYDTGTQKHDSRELDIVRLGQFSSRGSRRVERLDSSNQEIRDEGDKAIAVATVLKKSASHAVPNERQLRNGEHDWRKFLKDKSEKSKHGSKWVVKSVMEEVLSSSEESESEASENLSCTSEEESGD 430          
BLAST of mRNA_P-littoralis_Contig1195.5.1 vs. uniprot
Match: D7FIQ1_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIQ1_ECTSI)

HSP 1 Score: 362 bits (929), Expect = 3.250e-116
Identity = 201/436 (46.10%), Postives = 272/436 (62.39%), Query Frame = 1
Query:  205 RSDSSCISWKRFQNLVLGS--KGVLWKTKFIRPAETRWMVIWEGAAILEERWEQVRWLFVEWAAKVLLRTPFMSYWFKATCMLQNPLIRVHAKFCGALHKAILSWAYNWLRGEGGYFLKGPDGVPKRLPPGMRLAEVPDFSLLLLSRLIELREHPWKYFPELLYFAMQKLDDEEFEAFLQNFEEGGGFSWEMEQRWIKWTDRHQHLPLSMARLGCSSFYEGKWVGSEKAFEHAVGQEFARALLVVLWPDAYQNVEWVRWDEEHDFREILANDLATAPTQREKDELTLGMFSKLNDETEFRQEVERYAASARGKAEVVNDDNDKGNPSPRASSFPLLWTFPLLYEWSCHLFFFAPIHQQLVESVFSKYDTCTKPCDSREIDIVRLGQFSSAQSRKIQRAHASNSEIRQAGAKAIKVARELSKAASTAVPCERQLRKR 1506
            RS+SS  +++R++ +V         W  KF+RPAETRWMV+ +GA +L +RWEQV WLF E+AA+ L +T F +YW ++  ML++PL+RVH  F   L + +  WAYNW+RG+GG+FLKG +GV ++L PGMRL EV DFS LLL +L  +R+ P  YF  +L      L +   + F+ NF E  GF  E +QRWIKW +RHQ LPLSMAR+GC SF+    +  E A E AVG EFARA L V W   Y+     R + E ++R  L  DL      R KDELT G+FS+++ +   R E+E+YA S  G  EV     D+G P    S+   L+ FPLLY+  CH F+F PIHQQL+E+ FSK+D+C +  D  E+DIVR+G + SA+SR I  A A+  +IR AG K ++ ARE    +    P E   RKR
Sbjct:   36 RSESSNANFQRWKRVVQQQFPDAKPWLIKFVRPAETRWMVVMDGAKLLCKRWEQVEWLFCEYAARNLNKTTFRNYWLQSAYMLRDPLVRVHVMFTARLGELLFDWAYNWIRGKGGFFLKG-EGVGRQLFPGMRLVEVADFSRLLLVKLETIRKDPKTYFAAVLERVQTTLSEAMAKLFMTNFSEDKGFFAEFKQRWIKWMERHQQLPLSMARIGCPSFFARTGIMGEGAVEQAVGPEFARAFLHVAWSALYEGEP--RTEREREYRTQLVKDLGGTTDARRKDELTFGLFSRIDSDRSVRNELEQYANSGWGDKEV-----DQGAPKG-TSALARLFDFPLLYKLVCHRFYFVPIHQQLIEAFFSKFDSCAQKTDMAEMDIVRVGGWKSAESRDIVCADATGEKIRAAGKKVLEKAREAKAVSHARKPAENLSRKR 462          
BLAST of mRNA_P-littoralis_Contig1195.5.1 vs. uniprot
Match: A0A6H5JSZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSZ3_9PHAE)

HSP 1 Score: 347 bits (891), Expect = 8.510e-114
Identity = 172/261 (65.90%), Postives = 204/261 (78.16%), Query Frame = 1
Query:  781 RWIKWTDRHQHLPLSMARLGCSSFYEGKWVGSEKAFEHAVGQEFARALLVVLWPDAYQNVEWVRWDEEHDFREILANDLATAPTQREKDELTLGMFSKLNDETEFRQEVERYAASARGKAEVVNDDNDKGNPSPRASSFPLLWTFPLLYEWSCHLFFFAPIHQQLVESVFSKYDTCTKPCDSREIDIVRLGQFSSAQSRKIQRAHASNSEIRQAGAKAIKVARELSKAASTAVPCERQLRKRSHDVTAFLKGVNDEARFGS 1563
            RW  W D HQHLP SMARL CSSF+EGKW GSEKAFEHAVGQE+ARA L+ LWP+ Y+  EWV WDEEH++ EIL +DL+ A T  EKDELT GMFSKLN   EFR EVERYA SAR K E+V DD D  N +PR S F ++W+FPLLYEW+CH   FAPIHQQLVES FS +DTCT+  DSREIDIVRLGQF S+ SR++QR +A+N EIRQAG KAI VAREL K+A+ A+P ERQLRKR+HD   FL+  +++++ GS
Sbjct:    4 RWTIWMDMHQHLPYSMARLACSSFFEGKWAGSEKAFEHAVGQEYARASLLALWPELYEGAEWVGWDEEHEYLEILRDDLSEAETTEEKDELTFGMFSKLNASAEFRGEVERYALSAREKKEIVVDD-DAENQAPRVSGFDMIWSFPLLYEWACHAILFAPIHQQLVESDFSTFDTCTQKHDSREIDIVRLGQFRSSHSRRVQRLYATNKEIRQAGDKAIAVARELKKSAAHAIPNERQLRKRTHDTKQFLRDQSEKSKHGS 263          
BLAST of mRNA_P-littoralis_Contig1195.5.1 vs. uniprot
Match: A0A6H5JI13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI13_9PHAE)

HSP 1 Score: 337 bits (864), Expect = 6.210e-107
Identity = 193/419 (46.06%), Postives = 253/419 (60.38%), Query Frame = 1
Query:  205 RSDSSCISWKRFQNLVLGS--KGVLWKTKFIRPAETRWMVIWEGAAILEERWEQVRWLFVEWAAKVLLRTPFMSYWFKATCMLQNPLIRVHAKFCGALHKAILSWAYNWLRGEGGYFLKGPDGVPKRLPPGMRLAEVPDFSLLLLSRLIELREHPWKYFPELLYFAMQKLDDE-EFEAFLQNFEEGGGFSWEMEQRWIKWTDRHQHLPLSMARLGCSSFYEGKWVGSEKAFEHAVGQEFARALLVVLWPDAYQNVEWVRWDEEHDFREILANDLATAPTQREKDELTLGMFSKLNDETEFRQEVERYAASARGKAEVVNDDNDKGNPSPRASSFPLLWTFPLLYEWSCHLFFFAPIHQQLVESVFSKYDTCTKPCDSREIDIVRLGQFSSAQSRKIQRAHASNSEIRQAGAKAIKVARE 1452
            RS+ S  S++R++ +V         W  KFIRPAETRWMV+ +GA +L ERWEQV WLF E+AA+ L +T F +YW ++ CML++PL+RVH  F   L + +  WAYNW+ G+GG+FLKG +GV +RL P MRL E  DFS LLL +L  +R+ P  Y   LL      L D    E+F    + G  F  E ++RWIK   RHQ LPLSMAR+GC SFY    +    A E AVG EFARA   V WP  Y+     R + E  +R  LA DL      R KDELTLG+FS ++ +   R E+E+YA S  G  E+ ++   KG      S+   L+  PLLY   CH F+F PIHQQL+E+ FSKYD+C K  D  E+D+VR+G + SA+SR I    A + +IR AG K +K A E
Sbjct:   36 RSEPSNASFQRWKRVVAAQFPNAKPWLIKFIRPAETRWMVVMDGAKLLCERWEQVEWLFCEYAARNLNKTTFRNYWVQSACMLRDPLVRVHVMFTARLGELLFDWAYNWIHGKGGFFLKG-EGVGRRLFPAMRLVEAADFSCLLLQKLETIRKDPQTYVAALLDRVRTTLSDPMRGESFRVELQRGQFFIAEFKKRWIKSMQRHQELPLSMARIGCPSFYARTGIMGGGAVEQAVGPEFARAFPHVAWPGLYEGEP--RTERERQYRTQLAKDLGGTTEARRKDELTLGLFSCIDGDLSVRSELEQYANSGWGDKEI-DESAPKGT-----SALARLFDLPLLYRLVCHRFYFVPIHQQLIEAFFSKYDSCAKKTDMAEMDVVRVGGWKSAESRDIVCVDAIDDQIRGAGKKVLKEATE 445          
BLAST of mRNA_P-littoralis_Contig1195.5.1 vs. uniprot
Match: D7FXZ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXZ1_ECTSI)

HSP 1 Score: 306 bits (785), Expect = 1.570e-97
Identity = 165/283 (58.30%), Postives = 202/283 (71.38%), Query Frame = 1
Query:  799 DRHQHLP-LSMARLGCSSFYEGKWVGSEKAFEHAVGQEFARALLVVLWPDAYQNVEWVRWDEEHDFREILANDLATAPTQREKDELTLGMFSKLNDETEFRQEVERYAASARGKAEVVNDDNDKGNPSPRASSFPLLWTFPLLYEWSCHLFFFAPIHQQLVESVFSKYDTCTKPCDSREIDIVRLGQFSSAQSRKIQRAHASNSEIRQAGAKAIKVARELSKAASTAVPCERQLRKRSHDVTAFLKGVNDEARFGSEWLFAGIAEESESEKSAKSDDLSESSG 1644
            DRH   P L   ++     YEGKW G++KA EHAVG+EFARALLV LWP+  ++ EW  W EEHD   IL  DL+ A T  EKD+LT GM+++LN+  EFR+EVE YAASA  K EVV+DD D  NP PR S+F ++W FPLLYEW+ H  F A IH+QLV SVFSKYDTCT+  DSREIDIVRLGQF SAQSR+I++ HASN EIR+AG KAI  AR L KAAS AVP ERQ RKR HDVT F++   ++A++G  W    + + SESE  ++SD  +E SG
Sbjct:    2 DRHASAPPLQHGQVSLQLLYEGKWAGADKANEHAVGKEFARALLVALWPEKNESAEWREWQEEHDILGILEGDLSEATTPGEKDKLTFGMYTELNESAEFRKEVEVYAASAHEKKEVVSDDLDVDNPPPRVSAFGMIWNFPLLYEWARHAIFLAVIHEQLVGSVFSKYDTCTQQHDSREIDIVRLGQFRSAQSRRIRKLHASNHEIREAGNKAIAEARALRKAASEAVPNERQQRKRGHDVTQFVRTATNKAKYGPGWQVRSVLDMSESE--SESDVSAELSG 282          
BLAST of mRNA_P-littoralis_Contig1195.5.1 vs. uniprot
Match: A0A6H5JMW8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMW8_9PHAE)

HSP 1 Score: 263 bits (673), Expect = 3.450e-79
Identity = 150/332 (45.18%), Postives = 193/332 (58.13%), Query Frame = 1
Query:  313 MVIWEGAAILEERWEQVRWLFVEWAAKVLLRTPFMSYWFKATCMLQNPLIRVHAKFCGALHKAILSWAYNWLRGEGGYFLKGPDGVPKRLPPGMRLAEVPDFSLLLLSRLIELREHPWKYFPELLYFAMQKLDDEEFEAFLQNFEEGGGFSWEMEQRWIKWTDRHQHLPLSMARLGCSSFYEGKWVGSEKAFEHAVGQEFARALLVVLWPDAYQNVEWVRWDEEHDFREILANDLATAPTQREKDELTLGMFSKLNDETEFRQEVERYAASARGKAEVVNDDNDKGNPSPRASSFPLLWTFPLLYEWSCHLFFFAPIHQQLVESVFSKYDTC 1308
            MV+ +GA +L ERWEQV  LF ++A   L +T   +YW ++  ML++P   VH  F   L + +  WAYNW+ G+GG+FLKG +GV +RL PGMRL EV DFS LLL +L  +R+ P  YF  LL      L D   + F+  F E   F  E ++RWIKW  RHQ LPLSMAR+GC SFY    +    A E AVG EFARA L V WP  Y+     R + E ++R  L  DL      R KDELT G+FS ++ +   R E+E+YA S  G  E+     D+  P    S    L  FPLLY+  CH F+F PIHQQL+E+ FSK   C
Sbjct:    1 MVVIDGAKLLCERWEQVERLFCDFARN-LNKTTVRNYWVQSAYMLRDPFFHVHVMFTARLKELLFDWAYNWIHGKGGFFLKG-EGVDRRLFPGMRLVEVADFSRLLLQKLETIRKDPKTYFAALLDRVRATLSDPMVKFFMLAFSEDRVFFAEFKKRWIKWMQRHQELPLSMARIGCPSFYARTGIMGGGAVEQAVGPEFARAFLHVAWPGLYEGEP--RTEREREYRTQLVKDLGGTTEARRKDELTFGLFSCIDGDLSVRSELEQYANSGWGNKEI-----DESAPKS-TSELARLLDFPLLYQLVCHRFYFVPIHQQLIEAFFSKNIVC 322          
BLAST of mRNA_P-littoralis_Contig1195.5.1 vs. uniprot
Match: A0A6H5JQF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQF6_9PHAE)

HSP 1 Score: 247 bits (630), Expect = 1.790e-73
Identity = 142/320 (44.38%), Postives = 189/320 (59.06%), Query Frame = 1
Query:  313 MVIWEGAAILEERWEQVRWLFVEWAAKVLLRTPFMSYWFKATCMLQNPLIRVHAKFCGALHKAILSWAYNWLRGEGGYFLKGPDGVPKRLPPGMRLAEVPDFSLLLLSRLIELREHPWKYFPELLYFAMQKLDDEEFEAFLQNFEEGGGFSWEMEQRWIKWTDRHQHLPLSMARLGCSSFYEGKWVGSEKAFEHAVGQEFARALLVVLWPDAYQNVEWVRWDEEHDFREILANDLATAPTQREKDELTLGMFSKLNDETEFRQEVERYAASARGKAEVVNDDNDKGNPSPRASSFPLLWTFPLLYEWSCHLFFFAPIHQQ 1272
            MV  + A +L +RWEQV WLF ++AA+ L +T F +YW ++  +L++P++RVH      L + +  WAYNW+RG+GG+FLK  +GV +RL PGMRL EV DFS LLL +L  +R+ P  Y      FA +KL       F  N  E  GF    ++RWIKW +RHQ LPLSMAR+GC SFY    + +E A E AVG +FARA L V WP  Y      R + E +FR  L          R KDELT G+FS ++ +   R E+E+YA S     EV     D+G P    S+   L+ +PLLY+  CH F+F PIHQQ
Sbjct:    1 MVDTDRAKLLCDRWEQVSWLFCKYAARYLNKTTFRNYWLQSVYLLRDPILRVHVMLTARLGELLFDWAYNWIRGKGGFFLKC-EGVGRRLFPGMRLVEVADFSRLLLLKLETIRKDPETY------FAAEKL-------FTTNCSEDKGFFALFKKRWIKWMERHQQLPLSMARIGCPSFYARTGIMAEGAVEQAVGPKFARAFLHVAWPGLYDGEP--RTEREREFRTQLVKYSGEITEARRKDELTFGLFSCIDSDLSVRNELEQYANSGWSDKEV-----DQGAPKG-TSALACLFDYPLLYKLVCHRFYFVPIHQQ 298          
BLAST of mRNA_P-littoralis_Contig1195.5.1 vs. uniprot
Match: A0A6H5KH75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH75_9PHAE)

HSP 1 Score: 201 bits (510), Expect = 7.090e-54
Identity = 155/510 (30.39%), Postives = 208/510 (40.78%), Query Frame = 1
Query:  205 RSDSSCISWKRFQNLVLGS--KGVLWKTKFIRPAETRWMVIWEGAAILEERWEQVRWLFVEWAAKVLLRTPFMSYWFKATCMLQNPLIRVHAKF--------------------------------CGALHKA-------------------------------ILSWAYNWLRGEGGYFLKGPDGVPKRLPPGMRLAEVPDFSLLLLSRLIELREHPWKYFPELLYFA------------------------------------------MQKLDDEEF--------------------------EAFLQNFEEGGGFSWEMEQRWIKWTDRHQHLPLSMARLGCSSFYE--GKWVGSEKAFEHAVGQEFARALLVVLWPDAYQNVEWVRWDEEHDFREILANDLATAPTQREKDELTLGMFSKLNDETEFRQEVERYAASARGKAEVVNDDNDKGNPSPRASSFPLLWTFPLLYEWSCHLFFFAPIHQQLVESVFSKYDTCTKPCDSR 1329
            RS+SS  +++R++ +V         W  KFIRPAETRWMV+ +GA +L ERWEQV WLF E+AA+ L +T F +YW ++ CML++PL+RVH  F                                 G L+K                                +  WAYNW+ G+GG+FLKG +GV +RL PGMRL EV DFS LLL +L  + + P  YF +  Y A                                          M+ ++  +F                          + F+ NF E   F  E+++RWIKW  RHQ LPLSMAR+GC SFY   G   G  K                                                      DELT G FS ++ +   R E E+YA S  G  E+ ++   KG      S+   L+ FPLLY+  CH F+F P  QQL+E+ FSK   C      R
Sbjct:   36 RSESSNANFQRWKRIVAAQFPNAKPWLIKFIRPAETRWMVVMDGAKLLCERWEQVEWLFCEYAARNLNKTTFRNYWVQSACMLRDPLVRVHVMFTARLGELLFDWAAKGSXCERWEQVEWLFCEYAAGNLNKTTYRNYWVQSACMLRDPLVRVHVMFTARLGELLFDWAYNWIHGKGGFFLKG-EGVGRRLSPGMRLVEVADFSRLLLQKLETIHKDPQTYFXQQGYLAHPGNTFHXXXXXXXXXXXVPHNRTTTWHCYKYIYHGRRLFPGMRSVEVADFSRLLLQELETIRKDPQTYFAALLDRAKLFMLNFSEDSFFFAEVKKRWIKWMQRHQELPLSMARIGCPSFYSRTGTMGGGLK------------------------------------------------------DELTFGEFSGVDGDLSVRSEPEQYANSGWGDKEI-DESAPKGT-----SALARLFDFPLLYQLVCHRFYFVPNPQQLIEAFFSKDIVCADATGDR 484          
BLAST of mRNA_P-littoralis_Contig1195.5.1 vs. uniprot
Match: A0A6H5L8G1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8G1_9PHAE)

HSP 1 Score: 179 bits (453), Expect = 1.490e-48
Identity = 95/203 (46.80%), Postives = 128/203 (63.05%), Query Frame = 1
Query:  346 ERWEQVRWLFVEWAAKVLLRTPFMSYWFKATCMLQNPLIRVHAKFCGALHKAILSWAYNWLRGEGGYFLKGPDGVPKRLPPGMRLAEVPDFSLLLLSRLIELREHPWKYFPELLYFAMQKLDDEEFEAFLQNFEEGGGFSWEMEQRWIKWTDRHQHLPLSMARLGCSSFYEGKWVGSEKAFEHAVGQEFARALLVVLWPDAYQ 954
            +RW++V  L  E+AA+ L +T F +YW ++  ML+NPL+RVH  F   L + +  WA NW+RG+GG+FLKG +GV +RL PGMRL EV D S LLL +L  +R+ P  YF  +L      L +   + F+ NF E   F  E ++RWIKW +RHQ LPLSMAR+ C SFY    + ++ A E   G EFARA L V WP  Y+
Sbjct:   45 QRWKRVEKLVREYAARYLNKTTFRNYWLQSAYMLRNPLVRVHVVFTARLGELLFDWANNWIRGKGGFFLKG-EGVGRRLFPGMRLVEVADCSRLLLLKLETIRKDPKTYFAAVLERVRTTLSEPMEKLFMTNFSEDKVFFAEFKKRWIKWMERHQQLPLSMARIACPSFYARTGIMADGAVE---GPEFARAFLHVAWPGLYE 243          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1195.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A6H5JU73_9PHAE1.110e-19960.70Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN38_9PHAE6.070e-14350.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIQ1_ECTSI3.250e-11646.10Uncharacterized protein n=3 Tax=Ectocarpus silicul... [more]
A0A6H5JSZ3_9PHAE8.510e-11465.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JI13_9PHAE6.210e-10746.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXZ1_ECTSI1.570e-9758.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JMW8_9PHAE3.450e-7945.18Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JQF6_9PHAE1.790e-7344.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KH75_9PHAE7.090e-5430.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L8G1_9PHAE1.490e-4846.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1195contigP-littoralis_Contig1195:28603..32169 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Model size1656
Hectar predicted targeting categoryother localisation
Exons3
Cds size1656
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789503.213372-CDS-P-littoralis_Contig1195:28602..288081680789503.213372-CDS-P-littoralis_Contig1195:28602..28808Pylaiella littoralis U1_48CDSP-littoralis_Contig1195 28603..28808 +
1680789503.2259383-CDS-P-littoralis_Contig1195:30382..308961680789503.2259383-CDS-P-littoralis_Contig1195:30382..30896Pylaiella littoralis U1_48CDSP-littoralis_Contig1195 30383..30896 +
1680789503.235427-CDS-P-littoralis_Contig1195:31233..321691680789503.235427-CDS-P-littoralis_Contig1195:31233..32169Pylaiella littoralis U1_48CDSP-littoralis_Contig1195 31234..32169 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1195.5.1prot_P-littoralis_Contig1195.5.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1195 28603..32169 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1195.5.1

>prot_P-littoralis_Contig1195.5.1 ID=prot_P-littoralis_Contig1195.5.1|Name=mRNA_P-littoralis_Contig1195.5.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=552bp
RASGSEPSRTHPLHAPSRSQPNLEEQARRSLVTIKRETTHQFSLRCSDHT
TFDTREFHHIWRHGKQRPRSDSSCISWKRFQNLVLGSKGVLWKTKFIRPA
ETRWMVIWEGAAILEERWEQVRWLFVEWAAKVLLRTPFMSYWFKATCMLQ
NPLIRVHAKFCGALHKAILSWAYNWLRGEGGYFLKGPDGVPKRLPPGMRL
AEVPDFSLLLLSRLIELREHPWKYFPELLYFAMQKLDDEEFEAFLQNFEE
GGGFSWEMEQRWIKWTDRHQHLPLSMARLGCSSFYEGKWVGSEKAFEHAV
GQEFARALLVVLWPDAYQNVEWVRWDEEHDFREILANDLATAPTQREKDE
LTLGMFSKLNDETEFRQEVERYAASARGKAEVVNDDNDKGNPSPRASSFP
LLWTFPLLYEWSCHLFFFAPIHQQLVESVFSKYDTCTKPCDSREIDIVRL
GQFSSAQSRKIQRAHASNSEIRQAGAKAIKVARELSKAASTAVPCERQLR
KRSHDVTAFLKGVNDEARFGSEWLFAGIAEESESEKSAKSDDLSESSGDD
E*
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mRNA from alignment at P-littoralis_Contig1195:28603..32169+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1195.5.1 ID=mRNA_P-littoralis_Contig1195.5.1|Name=mRNA_P-littoralis_Contig1195.5.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3567bp|location=Sequence derived from alignment at P-littoralis_Contig1195:28603..32169+ (Pylaiella littoralis U1_48)
CGTGCGAGCGGAAGCGAGCCGTCCCGCACGCACCCGCTTCACGCCCCCTC TCGCTCACAACCCAATCTGGAGGAGCAAGCGAGAAGGAGCTTGGTAACAA TCAAGAGAGAAACGACACATCAGTTCAGCTTGCGTTGCAGTGATCACACC ACGTTCGACACGAGAGAATTTCATCACATTTGGCGCCACGGCAAGCAACG TCCACGGTGAGCTGTCTGTCGTCTTATTATCTCTTCTCTGTTCCTGAGCT CCTTCGACCGCTCCTCCCCCCCCGCCTTTTGCTTTCAGTTCGTACTGGTT TCAGTACAGCCACTGCTGAAACATTTTGTTCTTAGTATTTCCAGTATAAA CTGGTCCGCTGTCTTGGTAGTGTCATATATATATTTTTTTCGTGATCGAA CATCTGAGCACGTACCGAGATGTCTTCGGACTCAGCTTCTTCCAGCCCTG TGCACAACCGTACTAGCAACAGCAGTGGTAGCCCGGCGAGTGCCACGGTA TCGCTTGCTGCTTCATCTAGTCACGGTAGTGAGCTTGACAGTGTGCTCTC GCTTGATGCTGAAAACTTAGAGTCGCTTCAGCATGAACCTGCTGCAGCCG ACCACAGGATGAGTTCCGTTGAGTTGCACACACACAGGCAGTCACCCCCA AACCATGGCCACGGCTTCGCAAGCCTCAGCCATGAGTAGTGTACTGCCTC TTGCGGTAGTGCCTCCAATTGCTGTAAAATCAGGCCCTGTTGTACAGGCT AGTTCAGCACATCCGTCGGTTTCAGCAATGGCCTCTGCCGCCGTATCTGA TCATGTACCTGTATCGGTCGATACAGCCTCTACTACTGCAGTACTGCTGT TAGAAAATTCCGACACTACTGCTGTACGATCTGGAATGAATGATGATGAT ACTACTGCAGTACTGCTGTTAGAAAATTCCGACACTACTGCTGCACGATC TGGAATGGATGAAACTACTGCAGTTTTATCACACACACTCTCCCTCGAGC ACAGGTTCGAGAGCTCAAACACAACAATGCTTGACTCGGTTCTTGAAACA CTCCGTGAGCTCAGCACCTCACCCGACGCCTCGGGATCTCCGGACCCATC CGAGTCTCCTCCTTCGGGATCAGGGGGAAAGTCGGCTGCATTCTCGCGCC CTTCCCCAACAACTGTTAGGGCTGCGCCTGACCCCCCTTTTTGAGGGTAA AATATGTCCGGAGTTCGTTCCGAAAATGCTGAATAGATTTATTTTAGCCA ATCATATAACAACATTTTGAGTGACGTTTTCATCTGTTGGAGTCGAAGAG CCCAAAGAACAAACCAAAGAACGGCGAGTACGTGTGTGTGCCGGTGCTGC TGCTGCTCTCACGATTTTCTCTCAAGCGTTCTAGAGGCGCGATGCTGATG AAGCAGCAGTAACAGCAGCACTAGCAGTGTGCACTGCTGTGCAAAGCAGC CGCCTTGATTCAACAAGCAGCAGTAGCCAGATCACACCACCAGTGGGCCG CCATGGCCGATAGCGCGCAAGGACGCGGACAGCAGCCCCAGAGCAACAAT CAATCTCAACAAGCAGAGAGCGAGCCTGCTCCTGCTGCTGCTGCTTCTGC TTTCGATGGCTTCGTCTTTGCTATCCGTATCGGATGTCTCTTGCACATCC TGCACCTCGCGGTGAATGCGGGGATGCAGTCTCTGTTCTTCATGGGCCCC CTCACTCAGGCGTCATGGCACGAGTGGCCAAAGCCTCACCTCGTCGCTTT ACTTGGATCACTTTGGTACAACACCTCCAGGTCGGATTCATCTTGTATTT CATGGAAAAGATTTCAAAACCTGGTGTTAGGAAGCAAAGGGGTCTTGTGG AAAACAAAATTCATCAGGCCCGCCGAAACGCGGTGGATGGTGATTTGGGA GGGCGCAGCCATTCTTGAGGAACGCTGGGAGCAGGTCCGGTGGCTGTTTG TGGAGTGGGCTGCCAAGGTTCTACTTCGCACCCCGTTTATGTCGTACTGG TTCAAGGCGACGTGCATGCTCCAAAATCCTCTCATCCGAGTACACGCTAA GTTTTGTGGTGCCCTGCACAAGGCGATCCTGAGTTGGGCATACAACTGGC TGCGTGGCGAGGGTGGATACTTCTTGAAGGGCCCTGATGGAGTACCGAAG CGGCTGCCACCTGGGATGCGATTGGCCGAAGTACCTGACTTCTCCCTCTT GTTACTCTCCCGCCTGATCGAGCTTCGCGAGCACCCATGGAAGTATTTTC CTGAGCTGCTCTATTTTGCGATGCAGAAGCTGGACGACGAAGAGGTGAAA AAATGATTTCCCAGCAGCAGCTGTTTTTTATCTGAACAAATGAATGAAAA AATGTTTTTACAGCAGTCTGAATTTGACTGAAACAAAGAGGGAAAAATGA TTTTTTTCCAAATCAAGAAAGAGAAGGCTGAGCAAAACTTTTTGCGGAAC ATCTTCTGCTGCTCTTTGCCTGCTCTCTTTCTCCGCTATCTCTGTCGTCT CCTGCTCGCGAGCGCCGGCTCGCATGCGTTGTGACTGGACTTTCACTACC ACCGTTAGCAACCCTCACGAGTTTCCTGTATTTCGCCTACCCCTAAGTTC TCTATTCTCCTGACGCGTGCTGCTCGACCAGTTCGAGGCATTTTTGCAAA ATTTCGAAGAAGGTGGCGGCTTTTCTTGGGAGATGGAGCAGCGGTGGATC AAATGGACGGACAGGCACCAGCACCTTCCCCTCAGCATGGCGCGCCTGGG GTGTAGTTCTTTTTACGAAGGAAAGTGGGTTGGGTCGGAGAAGGCTTTTG AGCATGCTGTAGGGCAGGAGTTTGCGCGGGCTTTACTGGTGGTCCTTTGG CCTGACGCATACCAGAACGTGGAGTGGGTGAGATGGGATGAAGAACATGA TTTCCGTGAAATCCTTGCAAACGACCTTGCAACGGCACCAACGCAGAGAG AGAAGGATGAGCTCACTCTAGGCATGTTTTCAAAGTTGAACGATGAGACA GAGTTCAGACAAGAAGTCGAGCGGTATGCCGCATCCGCGCGAGGCAAGGC AGAGGTTGTGAACGATGATAACGATAAGGGTAATCCATCACCTCGTGCTT CAAGCTTTCCTTTGCTGTGGACTTTTCCTTTGCTCTACGAATGGTCATGC CACCTGTTCTTTTTTGCGCCGATTCACCAGCAACTTGTCGAGAGCGTGTT TTCCAAGTATGATACGTGCACAAAGCCGTGCGATTCGAGAGAGATTGACA TCGTTCGCCTGGGTCAGTTCTCATCAGCTCAGTCAAGAAAGATACAGAGG GCTCACGCCTCCAACTCCGAAATCCGGCAAGCAGGAGCCAAGGCAATCAA GGTTGCTCGAGAGTTGAGTAAAGCTGCTTCTACCGCAGTTCCGTGCGAGC GACAGCTTCGCAAACGATCACACGACGTCACCGCATTCTTGAAAGGCGTC AATGACGAGGCTAGGTTTGGGTCGGAATGGCTTTTTGCAGGAATTGCAGA GGAGTCTGAGTCTGAGAAGTCAGCAAAGTCAGACGATCTCAGCGAGTCGT CGGGCGATGACGAGTGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig1195:28603..32169+

>mRNA_P-littoralis_Contig1195.5.1 ID=mRNA_P-littoralis_Contig1195.5.1|Name=mRNA_P-littoralis_Contig1195.5.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1656bp|location=Sequence derived from alignment at P-littoralis_Contig1195:28603..32169+ (Pylaiella littoralis U1_48)
CGTGCGAGCGGAAGCGAGCCGTCCCGCACGCACCCGCTTCACGCCCCCTC
TCGCTCACAACCCAATCTGGAGGAGCAAGCGAGAAGGAGCTTGGTAACAA
TCAAGAGAGAAACGACACATCAGTTCAGCTTGCGTTGCAGTGATCACACC
ACGTTCGACACGAGAGAATTTCATCACATTTGGCGCCACGGCAAGCAACG
TCCACGGTCGGATTCATCTTGTATTTCATGGAAAAGATTTCAAAACCTGG
TGTTAGGAAGCAAAGGGGTCTTGTGGAAAACAAAATTCATCAGGCCCGCC
GAAACGCGGTGGATGGTGATTTGGGAGGGCGCAGCCATTCTTGAGGAACG
CTGGGAGCAGGTCCGGTGGCTGTTTGTGGAGTGGGCTGCCAAGGTTCTAC
TTCGCACCCCGTTTATGTCGTACTGGTTCAAGGCGACGTGCATGCTCCAA
AATCCTCTCATCCGAGTACACGCTAAGTTTTGTGGTGCCCTGCACAAGGC
GATCCTGAGTTGGGCATACAACTGGCTGCGTGGCGAGGGTGGATACTTCT
TGAAGGGCCCTGATGGAGTACCGAAGCGGCTGCCACCTGGGATGCGATTG
GCCGAAGTACCTGACTTCTCCCTCTTGTTACTCTCCCGCCTGATCGAGCT
TCGCGAGCACCCATGGAAGTATTTTCCTGAGCTGCTCTATTTTGCGATGC
AGAAGCTGGACGACGAAGAGTTCGAGGCATTTTTGCAAAATTTCGAAGAA
GGTGGCGGCTTTTCTTGGGAGATGGAGCAGCGGTGGATCAAATGGACGGA
CAGGCACCAGCACCTTCCCCTCAGCATGGCGCGCCTGGGGTGTAGTTCTT
TTTACGAAGGAAAGTGGGTTGGGTCGGAGAAGGCTTTTGAGCATGCTGTA
GGGCAGGAGTTTGCGCGGGCTTTACTGGTGGTCCTTTGGCCTGACGCATA
CCAGAACGTGGAGTGGGTGAGATGGGATGAAGAACATGATTTCCGTGAAA
TCCTTGCAAACGACCTTGCAACGGCACCAACGCAGAGAGAGAAGGATGAG
CTCACTCTAGGCATGTTTTCAAAGTTGAACGATGAGACAGAGTTCAGACA
AGAAGTCGAGCGGTATGCCGCATCCGCGCGAGGCAAGGCAGAGGTTGTGA
ACGATGATAACGATAAGGGTAATCCATCACCTCGTGCTTCAAGCTTTCCT
TTGCTGTGGACTTTTCCTTTGCTCTACGAATGGTCATGCCACCTGTTCTT
TTTTGCGCCGATTCACCAGCAACTTGTCGAGAGCGTGTTTTCCAAGTATG
ATACGTGCACAAAGCCGTGCGATTCGAGAGAGATTGACATCGTTCGCCTG
GGTCAGTTCTCATCAGCTCAGTCAAGAAAGATACAGAGGGCTCACGCCTC
CAACTCCGAAATCCGGCAAGCAGGAGCCAAGGCAATCAAGGTTGCTCGAG
AGTTGAGTAAAGCTGCTTCTACCGCAGTTCCGTGCGAGCGACAGCTTCGC
AAACGATCACACGACGTCACCGCATTCTTGAAAGGCGTCAATGACGAGGC
TAGGTTTGGGTCGGAATGGCTTTTTGCAGGAATTGCAGAGGAGTCTGAGT
CTGAGAAGTCAGCAAAGTCAGACGATCTCAGCGAGTCGTCGGGCGATGAC
GAGTGA
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