mRNA_P-littoralis_Contig773.18.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig773.18.2
Unique NamemRNA_P-littoralis_Contig773.18.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig773.18.2 vs. uniprot
Match: A0A6H5J9W7_9PHAE (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9W7_9PHAE)

HSP 1 Score: 793 bits (2049), Expect = 4.170e-266
Identity = 583/1002 (58.18%), Postives = 644/1002 (64.27%), Query Frame = 1
Query:    1 QSETCYTDENGETVSPEALRRLLRKFGSHEREELLRKLERNARQTFKVGKLNLVDLAGSERVRLSGATGQRLQESKKINQSLSALGNVISALTDHRGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMISPALESMVETLSTVKFASRAKNIKNQPIVNEDFDQK-------SLLRKYERELKRLRAELEERSRNLVDKRQLLFVEGERRRAEADKMAAIRALE------------------------ERSLEFQREKEEKRHLEGRIAMLTGQMIGRGRRADGGAEGADYADRLADLERERNTIELEKEQI--------------CALNDELEASESHQELIEDALDMRTQQLFHLQKALVLHSSGGDGGEAVGE--------------------GMDQQAPGGWGGIIGTPAASSADSKSAGGSGVASPLRSIPHNPNQXXXXXXXXXXXXXXXXXVFSSATPKNTSAVVNGDRTAARVSDNHHSSQLSSNTASLDDINTNVSDRIRASTAAVTAATAAA--GRDETRQSPPQEDLITFPRFKPHTLMQPTLFSTADPAGGVSLHDTGILAGGDDEQGGEGDRGGXXXXXSGRVEAAKGAGAGVGGTKLLNAWEKIEELEGLVESSRSHNERLLEDLEEVQTDKVSMEYLLREKLERLVQSEIEARVARMHQDGGVDEILRRELDGLRVEAAARARSEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESSSEMLTRTTEELKELRAENTKLRRRVYDIYLRAVRAGHLSSDGKSAKGGESGSKSIAPDGAQGAALQSRCEALLGERKAMQA--------------------------------------------RTIMEQKVQVLVDNVADSACAVLNFVVASESDNGN---GDGHGNVGXXXXXXXXXRRGRTGDEGDTXXXXXXXXXXXXXKTPIEGPGSSSTT---SAATAKDAAARALSKDVGQLRRLVQAAITALRNAEIEDQQRAKDST 2655
            QSET YTDE GE +SPE LR+LLRK GS ERE LLRKLE NARQTFKVGKLNLVDLAGSERVRLSGATGQRL+ESKKINQSLSALGNVISALTDHRGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMISPALESMVETLSTVKFASRAKNIKNQPIVNEDFDQK       SLLRKYERELKRLRAELEERSRNLVDKRQLLFVEGERRRAEADKMAAIRALE                        ERSLEFQREKEEKR LEGRIAMLTGQMIGRGRR+DGGAEG DYADRLADLERERNTIELEKEQ+               AL   L  +E    LIEDALDMRTQQLFHLQKALV+H   G  G  VG+                     +D++   GW   I +P A++A +K A GS     +R   HN  QXXXXXXXXXXXXXXXXX FSS    N +          R  D   SS  +        ++ N       ST   +A  AA   GR+E    P +E+LI+FPRFKPH LMQPTLFST DPAGGVS HD GIL+  D EQGGEGDR  XXXXX GR EA K A  GVGG KLLNAWEKIEELEGLVESSRSHNERLL+DLEEVQTDKVSMEYLLREKLERLVQSEIEARVARMHQ   +  +L   +DG+   A   A ++                                  E ++E+L RTT+EL+ELR EN +LR+++    LR   A  +S + ++ K GE    S+A   AQ AALQ+RCEALLGERKAMQA                                            +TIMEQKV+VLVDNVADSACAVL+ V AS+S   N   GDG+               G T D                 ++  EG  S + T   S+  A++AA RALSKDVGQLRRLVQAAITALRNA+ EDQQR   +T
Sbjct:  559 QSETSYTDEKGEKMSPETLRQLLRKAGSQEREALLRKLETNARQTFKVGKLNLVDLAGSERVRLSGATGQRLRESKKINQSLSALGNVISALTDHRGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMISPALESMVETLSTVKFASRAKNIKNQPIVNEDFDQKVCQKQTDSLLRKYERELKRLRAELEERSRNLVDKRQLLFVEGERRRAEADKMAAIRALETAWGSCLQDPIDLSRTFVAFAYIQERSLEFQREKEEKRLLEGRIAMLTGQMIGRGRRSDGGAEGVDYADRLADLERERNTIELEKEQVERYKQLLMKQRDIMIALTQRL--NERDDALIEDALDMRTQQLFHLQKALVMHGGNGAEGGNVGDDQVCAAASDASTIPGHSGRSNLDRRTLDGW---IDSPGATAAATKVAAGSDKFLSVRPALHNRQQXXXXXXXXXXXXXXXXXSFSSGKSSNVNFEAPEPLGGRRCGDAGVSSSTTPTELHYRSVSGNTIFSPNGSTTKGSATPAAVFGGREEAHNPPLEEELISFPRFKPHALMQPTLFSTDDPAGGVSFHDGGILSREDGEQGGEGDRX-XXXXXXGRGEALKRA--GVGGAKLLNAWEKIEELEGLVESSRSHNERLLKDLEEVQTDKVSMEYLLREKLERLVQSEIEARVARMHQI--ICGVL---IDGVLEHAQHSALTQRPLTERQGPED-----------------------EIATEVLARTTQELEELRCENAELRKQMLAPALRREDANTISENREAGKEGEDDRSSVAHGSAQDAALQNRCEALLGERKAMQASSETNGTKWLPTLCRILTTTTAPYNEARLPADVVTSPRALAFLCQTIMEQKVKVLVDNVADSACAVLDLVAASQSGADNHRAGDGYS--------------GST-DHAQVVLPSPSLAPAGGTESAAEGEVSRAGTESSSSPAAREAAGRALSKDVGQLRRLVQAAITALRNADAEDQQRGITAT 1509          
BLAST of mRNA_P-littoralis_Contig773.18.2 vs. uniprot
Match: D7FRU8_ECTSI (Kinesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRU8_ECTSI)

HSP 1 Score: 481 bits (1238), Expect = 1.250e-160
Identity = 264/280 (94.29%), Postives = 269/280 (96.07%), Query Frame = 1
Query:    1 QSETCYTDENGETVSPEALRRLLRKFGSHEREELLRKLERNARQTFKVGKLNLVDLAGSERVRLSGATGQRLQESKKINQSLSALGNVISALTDHRGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMISPALESMVETLSTVKFASRAKNIKNQPIVNEDFDQKSLLRKYERELKRLRAELEERSRNLVDKRQLLFVEGERRRAEADKMAAIRALEERSLEFQREKEEKRHLEGRIAMLTGQMIGRGRRADGGAEGADYADRLADLERERNTIELEKEQI 840
            QSET YTDE GE +SPE LR+LLRK GS ERE LLRKLE NARQTFKVGKLNLVDLAGSERVRLSGATGQRL+ESKKINQSLSALGNVISALTDHRGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMISPALESMVETLSTVKFASRAKNIKNQPIVNEDFDQKSLLRKYERELKRLRAELEERSRNLVDKRQLLFVEGERRRAEADKMAAIRALEERSLEFQREKEEKR LEGRIAMLTGQMIGRGRR+DGG EG DYADRLADLERERNTIELEKEQ+
Sbjct:    2 QSETSYTDEKGEKMSPETLRQLLRKAGSPEREALLRKLETNARQTFKVGKLNLVDLAGSERVRLSGATGQRLRESKKINQSLSALGNVISALTDHRGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMISPALESMVETLSTVKFASRAKNIKNQPIVNEDFDQKSLLRKYERELKRLRAELEERSRNLVDKRQLLFVEGERRRAEADKMAAIRALEERSLEFQREKEEKRLLEGRIAMLTGQMIGRGRRSDGGTEGVDYADRLADLERERNTIELEKEQV 281          
BLAST of mRNA_P-littoralis_Contig773.18.2 vs. uniprot
Match: D7FRU7_ECTSI (Kinesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRU7_ECTSI)

HSP 1 Score: 383 bits (983), Expect = 2.130e-119
Identity = 263/433 (60.74%), Postives = 294/433 (67.90%), Query Frame = 1
Query: 1369 GRDETRQSPPQEDLITFPRFKPHTLMQPTLFSTADPAGGVSLHDTGILAGGDDEQGGEGDRGGXXXXXSGRVEAAKGAGAGVGGTKLLNAWEKIEELEGLVESSRSHNERLLEDLEEVQTDKVSMEYLLREKLERLVQSEIEARVARMHQDGGVDEILRRELDGLRVEAAARARSEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESSSEMLTRTTEELKELRAENTKLRRRVYDIYLRAVRAGHLSSDGKSAKGGESGSKSIAPDGAQGAALQSRCEALLGERKAMQARTIMEQKVQVLVDNVADSACAVLNFVVASESDNGN---GDGH-GNVGXXXXXXXXXRRGRTGDEGDTXXXXXXXXXXXXXKTPIEGPGSSSTTSAATAKDAAARALSKDVGQLRRLVQAAITALRNAEIEDQQRAKDST 2655
            GR+E   SP +EDLITFPRFKPH LMQPTLFST DPAGG S HD GIL+GGD EQ        XXXX +GRVEA K AGAG  G KLLNAWEKIEELEGLVESSRSHNERLLEDLEEVQTDKVSMEYLLREKLERLVQSEIEARVARMHQDGGVDEILRR+LDGLRVEAAARARSEA                                 E ++E+L RTT+EL+ELR EN +LR+++    LR   A  +S + ++ K GE    S+A D AQ AALQ RCEALLGERKAMQ  TIMEQKVQVLVDNVADSACAVL+ V AS+S   N   GDGH G+                G  G T                +   G+ S++S A A++AA RALSKDVGQLRRLVQAAITALRNA+ EDQQ+   +T
Sbjct:  135 GREEAHHSPFEEDLITFPRFKPHALMQPTLFSTDDPAGGGSFHDGGILSGGDGEQXXXXXXX-XXXXGAGRVEALKRAGAG--GAKLLNAWEKIEELEGLVESSRSHNERLLEDLEEVQTDKVSMEYLLREKLERLVQSEIEARVARMHQDGGVDEILRRQLDGLRVEAAARARSEAVLREEIRCLKSSALAQRPLTERQGPDD------EVATEVLARTTQELEELRCENAELRKQILSPALRREDANSMSENREAGKEGEDDRSSVAHDSAQEAALQDRCEALLGERKAMQ--TIMEQKVQVLVDNVADSACAVLDLVAASQSGIDNRRGGDGHTGSTDHAQVVLPSPSSAPAGGTGSTGEGE------------VSRAGTESSSSPA-AREAAGRALSKDVGQLRRLVQAAITALRNADAEDQQQGITAT 543          
BLAST of mRNA_P-littoralis_Contig773.18.2 vs. uniprot
Match: A0A024T9G2_9STRA (Kinesin-like protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T9G2_9STRA)

HSP 1 Score: 352 bits (903), Expect = 2.090e-103
Identity = 220/382 (57.59%), Postives = 261/382 (68.32%), Query Frame = 1
Query:    1 QSETCYTDENGETVSPEALRRLLRKFGSHEREELLRKLERNARQTFKVGKLNLVDLAGSERVRLSGATGQRLQESKKINQSLSALGNVISALTDHRGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMISPALESMVETLSTVKFASRAKNIKNQPIVNEDFDQKSLLRKYERELKRLRAELEERSRNLVDKRQLLFVEGERRRAEADKMAAIRALEERSLEFQREKEEKRHLEGRIAMLTGQMI-GRGRRADGGAEGA---------------------------------DYADRLADLERERNTIELEK----------------------------EQICALNDELEASESHQELIEDALDMRTQQLFHLQKALVLHSS 960
            QS+T Y D  G+ + PE    L+    +  R+    KLE   RQ+FKVGKLNLVDLAGSERVRLSGATGQRL+ESKKINQSLSALGNVI+ALTD RGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMISPALE++VE+LST+KFA+RAKNIKN+  VNED DQKSLLRKYERELKRLRAELEE++RN+VDKR+LL ++ +RRRAE DKMAAIRALE+RSLEF  EKEEK+ LE RI MLT QM+   G++     +G+                                 +Y  RLADLE+ER TIE EK                            EQI AL DEL+A + HQ+ +E+ LD +T QL HLQ+  + H++
Sbjct:  247 QSQTTYVDTAGKEIPPEEFTALV---NTQARDRS--KLESLVRQSFKVGKLNLVDLAGSERVRLSGATGQRLEESKKINQSLSALGNVIAALTDTRGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMISPALEAIVESLSTLKFANRAKNIKNEARVNEDLDQKSLLRKYERELKRLRAELEEKNRNVVDKRRLLELDEQRRRAEEDKMAAIRALEQRSLEFMLEKEEKKKLEQRIIMLTSQMLMSHGKQKGANDDGSSXXXXXXXGENEFSTEDPQFRIALKEQQDRIRKEYECRLADLEKERETIEEEKAQVDRYKQLLLKQRDIMIALTQRLNERDEQIMALQDELDAYDRHQKSLEEKLDEKTAQLIHLQRVTMEHNA 623          
BLAST of mRNA_P-littoralis_Contig773.18.2 vs. uniprot
Match: A0A0P1ARB4_PLAHL (Kinesin-like protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ARB4_PLAHL)

HSP 1 Score: 354 bits (908), Expect = 2.620e-103
Identity = 232/423 (54.85%), Postives = 272/423 (64.30%), Query Frame = 1
Query:    1 QSETCYTDENGETVSPEALRRLLRKFGSHER-----------------EELLRKLERNARQTFKVGKLNLVDLAGSERVRLSGATGQRLQESKKINQSLSALGNVISALTDHRGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMISPALESMVETLSTVKFASRAKNIKNQPIVNEDFDQKSLLRKYERELKRLRAELEERSRNLVDKRQLLFVEGERRRAEADKMAAIRALEERSLEFQREKEEKRHLEGRIAMLTGQMIGRGRRA--DGGAEGAD-----------------------YADRLADLERERNTIELEK----------------------------EQICALNDELEASESHQELIEDALDMRTQQLFHLQKALVLHSSGGDGGEAVGEGMDQQ---APGGWGGIIGTPAAS 1050
            QS+T Y D  G  V+PE    L+  + + +                    L  KLE   RQ+FKVGKLNLVDLAGSERVRLSGATGQRL+ESKKINQSLSALGNVISALTD RGRQHIPYRDSKLTRILEDSLGGNCKTTMMAM+SPALE+M E+LST+KFA RAK+IKN+  VNED DQKSLLRKYERELKRLRAEL+ERSRN+VDKR+LL ++ +RRRAE DKMAAIRALEERSLEF REKEEK+ LE RI+ LT QM+   +R    G  EG +                       Y  RLADLE+ER TIE EK                            EQI AL DEL+A + +Q+ +E+ LD +T  L HLQ+  + H++   G       +D +   A G WGG + T  AS
Sbjct:  371 QSKTAYVDAKGNDVAPEEFMALVNAYQARQNGGSTSTTGTGGKSLNGIAALHPKLESMIRQSFKVGKLNLVDLAGSERVRLSGATGQRLEESKKINQSLSALGNVISALTDARGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMVSPALEAMTESLSTLKFAHRAKHIKNEARVNEDLDQKSLLRKYERELKRLRAELDERSRNVVDKRRLLELDEQRRRAEEDKMAAIRALEERSLEFMREKEEKKRLEQRISALTSQMLMSSQRRLIPGATEGEETLNVEDPLIKDALKEHQDRIRQEYECRLADLEKERETIEEEKAQVDRYKLLLLKQRDIMIALTQRLNERDEQITALQDELDAYDRYQKELEEKLDEKTAHLIHLQRVAMEHNANSPGK------IDSELLKALGDWGGALRTTTAS 787          
BLAST of mRNA_P-littoralis_Contig773.18.2 vs. uniprot
Match: A0A7S1CJY2_9STRA (Kinesin-like protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CJY2_9STRA)

HSP 1 Score: 342 bits (876), Expect = 1.380e-101
Identity = 212/362 (58.56%), Postives = 255/362 (70.44%), Query Frame = 1
Query:    1 QSETCYTDENGETVSPEALRRLLRKFGSHEREELLRKLERNARQTFKVGKLNLVDLAGSERVRLSGATGQRLQESKKINQSLSALGNVISALTDHRGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMISPALESMVETLSTVKFASRAKNIKNQPIVNEDFDQKSLLRKYERELKRLRAELEERSRNLVDKRQLLFVEGERRRAEADKMAAIRALEERSLEFQREKEEKRHLEGRIAMLTGQMIGRGR--------------RADGGAEGADYADRLADLERERNTIELEK----------------------------EQICALNDELEASESHQELIEDALDMRTQQLFHLQKALVLHSS 960
            QSET Y D +G+ +S E   +L+ K  +H  +  L+ LE N RQ+FKVGKLNLVDLAGSERVRL+GATGQRL+ESKKINQSLSAL NVI+ALTD RGRQHIPYRDSKLTRILEDSLGGNCK+TMMAMISPALE+  E+LST+KFA+RAK+IKN+  +NED DQKSLLR+YERELKRLRAELEERSRN+VDKR++L +E ++RRAE DKMAAIR LE RS  F REK EKR LE RI+ML GQ++  G               R    A   +Y DR+  LERER +IE EK                            EQI AL DEL+A + HQ+ +E+ LD +T  L HLQ+  + H++
Sbjct:  349 QSETTYLDNDGKEMSTEDFHKLV-KSRAHG-DAGLKALEANVRQSFKVGKLNLVDLAGSERVRLTGATGQRLEESKKINQSLSALNNVIAALTDPRGRQHIPYRDSKLTRILEDSLGGNCKSTMMAMISPALEAFAESLSTLKFANRAKSIKNEARINEDVDQKSLLRRYERELKRLRAELEERSRNVVDKRKVLELEEQKRRAEEDKMAAIRELEARSRAFMREKAEKRKLEQRISMLQGQVLIGGTPKNMKDTPAFRAALREHQDALRKEYEDRMQRLERERESIEEEKAQVDRYKQLLLKQRDIMIMLTQRLNERDEQIMALQDELDAYDRHQKDLEEKLDSKTAALIHLQRVTMEHAA 708          
BLAST of mRNA_P-littoralis_Contig773.18.2 vs. uniprot
Match: A0A482S6I9_9ARCH (Kinesin motor domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S6I9_9ARCH)

HSP 1 Score: 335 bits (860), Expect = 1.920e-101
Identity = 205/363 (56.47%), Postives = 255/363 (70.25%), Query Frame = 1
Query:    1 QSETCYTDENGETVSPEALRRLLRKFGSHEREELLRKLERNARQTFKVGKLNLVDLAGSERVRLSGATGQRLQESKKINQSLSALGNVISALTDHRGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMISPALESMVETLSTVKFASRAKNIKNQPIVNEDFDQKSLLRKYERELKRLRAELEERSRNLVDKRQLLFVEGERRRAEADKMAAIRALEERSLEFQREKEEKRHLEGRIAMLTGQMIGRGRRADGG---------AEGA-------------DYADRLADLERERNTIELEK----------------------------EQICALNDELEASESHQELIEDALDMRTQQLFHLQK 939
            QSET Y D+ G  ++PE  ++ + K G H RE+ + ++E + +Q FKVGKLNLVDLAGSERV  SGATGQRL+ESK+IN+SL+ LG VISALT+ + RQHIPYR+SKLTR+LEDSLGGNCKTTMMAMISPA+E+M+ET+ST+KFA+RAKNIKN+  VNED DQKSLLRKYERELK+LRAELEERS+N+VDKR+LL ++ +RRRAEADK+AAIRALE RSLEF +EKEEK+ LE RI+ LT QMI RG   D            +G+             +Y D+LA LE+ER TIE EK                            EQI AL DEL+A + H + +E+ LD +T     LQ+
Sbjct:   50 QSETVYVDDRGNELTPEDFQQFMHKRGIH-REQDMARMEDHVKQAFKVGKLNLVDLAGSERVERSGATGQRLEESKQINKSLTMLGYVISALTEAKDRQHIPYRNSKLTRMLEDSLGGNCKTTMMAMISPAMEAMLETISTLKFANRAKNIKNEAKVNEDLDQKSLLRKYERELKQLRAELEERSKNVVDKRRLLELDEQRRRAEADKIAAIRALEARSLEFMQEKEEKKKLEARISQLTNQMI-RGHHVDTSKLNSSNNSLVDGSNEVVKEQQDRLRQEYEDKLAGLEKERETIEEEKAQVDRYKQLLLKQRDIMIALTQRLVERDEQIMALQDELDAYDRHHKELEEKLDEKTALCIKLQR 410          
BLAST of mRNA_P-littoralis_Contig773.18.2 vs. uniprot
Match: A0A5A8D575_CAFRO (Kinesin-like protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D575_CAFRO)

HSP 1 Score: 340 bits (872), Expect = 4.000e-101
Identity = 211/368 (57.34%), Postives = 255/368 (69.29%), Query Frame = 1
Query:    1 QSETCYTDENGETVSPEALRRLLRKFGSHEREELLRKLERNARQTFKVGKLNLVDLAGSERVRLSGATGQRLQESKKINQSLSALGNVISALTDHRGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMISPALESMVETLSTVKFASRAKNIKNQPIVNEDFDQKSLLRKYERELKRLRAELEERSRNLVDKRQLLFVEGERRRAEADKMAAIRALEERSLEFQREKEEKRHLEGRIAMLTGQMIGRGRRADGGAEG-------------------ADYADRLADLERERNTIELEK----------------------------EQICALNDELEASESHQELIEDALDMRTQQLFHLQKALVLHSSG 963
            QSET Y DE+G+ +S E   RL+ K  +H  ++ L++LE N RQ FKVGKLNLVDLAGSERVRL+GATGQRL+ES+KINQSLS+LGNVI+ALTD RGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMISPALE+ VE+LST+KFA+RAKNIKN+  VNED DQKSLLR+YEREL+RLR ELEERSRN+VDKR+LL ++ +       KMAAIRALE RS EF REKEEK+ LEGRI+ L GQM+        G EG                   A Y  +L +LE+ER ++E EK                            +QI AL DEL+A + HQ  +E+ LD +T  L HLQ+  + H++G
Sbjct:  361 QSETTYLDEDGQELSVEQFHRLV-KSRAHG-DDGLKRLEANVRQMFKVGKLNLVDLAGSERVRLTGATGQRLEESRKINQSLSSLGNVIAALTDPRGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMISPALEAFVESLSTLKFANRAKNIKNEARVNEDLDQKSLLRRYERELRRLRTELEERSRNVVDKRRLLELDEQXXXXXXXKMAAIRALEARSREFLREKEEKKRLEGRISALQGQMLT-------GGEGVTDTPAFRNALKEHQEKIRAKYDAKLHELEKERESMEEEKAQVDRYKQLLLKQRDIMILLTQRLNERDDQIVALQDELDAYDRHQRELEEKLDEKTAALIHLQRVALEHNTG 719          
BLAST of mRNA_P-littoralis_Contig773.18.2 vs. uniprot
Match: A0A662YDQ5_9STRA (Kinesin motor domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YDQ5_9STRA)

HSP 1 Score: 347 bits (890), Expect = 4.010e-100
Identity = 279/608 (45.89%), Postives = 353/608 (58.06%), Query Frame = 1
Query:  109 KLERNARQTFKVGKLNLVDLAGSERVRLSGATGQRLQESKKINQSLSALGNVISALTDHRGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMISPALESMVETLSTVKFASRAKNIKNQPIVNEDFDQKSLLRKYERELKRLRAELEERSRNLVDKRQLLFVEGERRRAEADKMAAIRALEERSLEFQREKEEKRHLEGRIAMLTGQMIGRGRR--------ADGGAEGA----------------------DYADRLADLERERNTIELEKEQICALNDELEASESHQELIEDALDMRTQQLFHLQKALVLHSSGGDGGEAVGEGMDQQAPGGWGGIIGTPAASSADSKSAGGSGVASPLRSIPHNPNQXXXXXXXXXXXXXXXXXVFSSATPKNTSAVVNGDRTAARVSDNHHSSQLSSNTASLDDINTNVSDRIRA--STAAVTAATAAAGRDETRQSPPQEDLITFPRFKPHTLMQPTLFSTADPAGGVSLHDTGILAGGDDEQGGEGDRGGXXXXXSGRVEAAKGAGAGVGGTKLLNAWEKIEELEGLVESSRSHNERLLEDLEEVQTDKVSMEYLLREKLERLVQSEIEARVARMHQDGGVDE 1836
            KLE   RQ+FKVGKLNLVDLAGSERVRLSGATGQRL+ESKKINQSLSALGNVISALTD RGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMISPALE+M E+LST+KFA+RAK+IKN+  VNED DQKSLLRKYERELKRLRAELEERSRN+VDKR+LL ++ +RRRAE DKMAAIRALEERS EF REKEEK+ LE RI+ LT QM+  G+R        A GG E                        +Y  RLADLE+ER TIE EK Q+                       R +QL   Q+ +++         A+ + ++++                                      ++   XXXXXXXXXXXXXX       + T+ +++      RV+  H       N +S   INT +   + A   +A+ TA   AA   +T   PPQE LIT  +++PH +    +    D  G  +LH                               A G         LL+A EK++EL  LV++  + ++R+ ++LE+V+++KVS+E+LLREKLE+LVQ E+EAR+  M++    D+
Sbjct:  461 KLEAMVRQSFKVGKLNLVDLAGSERVRLSGATGQRLEESKKINQSLSALGNVISALTDARGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMISPALEAMTESLSTLKFANRAKHIKNEARVNEDLDQKSLLRKYERELKRLRAELEERSRNVVDKRRLLELDEQRRRAEEDKMAAIRALEERSREFMREKEEKKRLEQRISTLTSQMLMSGQRRLPSSTSLAAGGGEAEAFDPEDPLIRDAIKEHQDRIRQEYECRLADLEKERETIEEEKAQVD----------------------RYKQLLLKQRDIMI---------ALTQRLNER--------------------------------------DEQITXXXXXXXXXXXXXXXXXXXXXEKTAHLIH----LQRVTMEH-------NASSPGKINTELLKALGAWGGSASHTAVAPAAASAKTA-GPPQELLITHKQYRPHAVDPVIVNDNNDSNGNNNLH---------------------------HASGAPG---------LLSAEEKMQELRTLVDTQTAEHQRMAKELEDVKSEKVSVEFLLREKLEKLVQVELEARLKAMNRPSSSDD 951          
BLAST of mRNA_P-littoralis_Contig773.18.2 vs. uniprot
Match: A0A1V9ZZT9_9STRA (Kinesin-like protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZZT9_9STRA)

HSP 1 Score: 341 bits (875), Expect = 6.850e-100
Identity = 203/303 (67.00%), Postives = 234/303 (77.23%), Query Frame = 1
Query:    1 QSETCYTDENGETVSPEALRRLLRKFGSHEREELLRKLERNARQTFKVGKLNLVDLAGSERVRLSGATGQRLQESKKINQSLSALGNVISALTDHRGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMISPALESMVETLSTVKFASRAKNIKNQPIVNEDFDQKSLLRKYERELKRLRAELEERSRNLVDKRQLLFVEGERRRAEADKMAAIRALEERSLEFQREKEEKRHLEGRIAMLTGQMI----GRGRRADGGAEGA-------------------DYADRLADLERERNTIELEKEQI 840
            QS+T Y D NG+ +  E    L+    S +R     KLE   RQ+FKVGKLNLVDLAGSERVRLSGATGQRL+ESKKINQSLSALGNVI+ALTD RGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMISPALE++VE+LST+KFA+RAKNIKN+  VNED DQKSLLRKYERELKRLRAELEE++RN+VDKR+LL ++ +RRRAE DKMAAIRALE+RSLEF  EKEEK+ LE RI MLT QM+     + + A+GG E +                   +Y  RLADLE+ER TIE EK Q+
Sbjct:  303 QSQTTYVDTNGKEIPLEEFTTLVNSQTSRDRT----KLESLVRQSFKVGKLNLVDLAGSERVRLSGATGQRLEESKKINQSLSALGNVIAALTDTRGRQHIPYRDSKLTRILEDSLGGNCKTTMMAMISPALEAIVESLSTLKFANRAKNIKNEARVNEDLDQKSLLRKYERELKRLRAELEEKNRNVVDKRRLLELDEQRRRAEEDKMAAIRALEQRSLEFMLEKEEKKKLEQRIIMLTSQMLMSHQNKQKNAEGGGEFSTEDPQFRLALKEQQERIRKEYECRLADLEKERETIEEEKAQV 601          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig773.18.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J9W7_9PHAE4.170e-26658.18Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
D7FRU8_ECTSI1.250e-16094.29Kinesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
D7FRU7_ECTSI2.130e-11960.74Kinesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A024T9G2_9STRA2.090e-10357.59Kinesin-like protein n=2 Tax=Aphanomyces invadans ... [more]
A0A0P1ARB4_PLAHL2.620e-10354.85Kinesin-like protein n=1 Tax=Plasmopara halstedii ... [more]
A0A7S1CJY2_9STRA1.380e-10158.56Kinesin-like protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A482S6I9_9ARCH1.920e-10156.47Kinesin motor domain-containing protein (Fragment)... [more]
A0A5A8D575_CAFRO4.000e-10157.34Kinesin-like protein n=1 Tax=Cafeteria roenbergens... [more]
A0A662YDQ5_9STRA4.010e-10045.89Kinesin motor domain-containing protein n=1 Tax=No... [more]
A0A1V9ZZT9_9STRA6.850e-10067.00Kinesin-like protein n=1 Tax=Thraustotheca clavata... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig773contigP-littoralis_Contig773:91300..102855 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FRU8
PFAMsKinesin
Model size2655
Max annot lvl2759|Eukaryota
KEGG koko:K20196
Hectar predicted targeting categoryother localisation
Exons15
Evalue2.05e-161
EggNOG OGsCOG5059@1|root,KOG4280@2759|Eukaryota
Descriptionmicrotubule motor activity
Cds size2655
COG categoryZ
BRITEko00000,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791596.0391169-CDS-P-littoralis_Contig773:91299..914401680791596.0391169-CDS-P-littoralis_Contig773:91299..91440Pylaiella littoralis U1_48CDSP-littoralis_Contig773 91300..91440 +
1680791596.050131-CDS-P-littoralis_Contig773:92168..923711680791596.050131-CDS-P-littoralis_Contig773:92168..92371Pylaiella littoralis U1_48CDSP-littoralis_Contig773 92169..92371 +
1680791596.0601268-CDS-P-littoralis_Contig773:92796..929441680791596.0601268-CDS-P-littoralis_Contig773:92796..92944Pylaiella littoralis U1_48CDSP-littoralis_Contig773 92797..92944 +
1680791596.074759-CDS-P-littoralis_Contig773:93486..936421680791596.074759-CDS-P-littoralis_Contig773:93486..93642Pylaiella littoralis U1_48CDSP-littoralis_Contig773 93487..93642 +
1680791596.0862482-CDS-P-littoralis_Contig773:94397..945201680791596.0862482-CDS-P-littoralis_Contig773:94397..94520Pylaiella littoralis U1_48CDSP-littoralis_Contig773 94398..94520 +
1680791596.0979264-CDS-P-littoralis_Contig773:95109..951751680791596.0979264-CDS-P-littoralis_Contig773:95109..95175Pylaiella littoralis U1_48CDSP-littoralis_Contig773 95110..95175 +
1680791596.1149213-CDS-P-littoralis_Contig773:96807..968551680791596.1149213-CDS-P-littoralis_Contig773:96807..96855Pylaiella littoralis U1_48CDSP-littoralis_Contig773 96808..96855 +
1680791596.1289117-CDS-P-littoralis_Contig773:97544..976611680791596.1289117-CDS-P-littoralis_Contig773:97544..97661Pylaiella littoralis U1_48CDSP-littoralis_Contig773 97545..97661 +
1680791596.13874-CDS-P-littoralis_Contig773:98027..987221680791596.13874-CDS-P-littoralis_Contig773:98027..98722Pylaiella littoralis U1_48CDSP-littoralis_Contig773 98028..98722 +
1680791596.148855-CDS-P-littoralis_Contig773:99410..995311680791596.148855-CDS-P-littoralis_Contig773:99410..99531Pylaiella littoralis U1_48CDSP-littoralis_Contig773 99411..99531 +
1680791596.1603434-CDS-P-littoralis_Contig773:99975..1000911680791596.1603434-CDS-P-littoralis_Contig773:99975..100091Pylaiella littoralis U1_48CDSP-littoralis_Contig773 99976..100091 +
1680791596.1750894-CDS-P-littoralis_Contig773:100947..1010911680791596.1750894-CDS-P-littoralis_Contig773:100947..101091Pylaiella littoralis U1_48CDSP-littoralis_Contig773 100948..101091 +
1680791596.1876268-CDS-P-littoralis_Contig773:101120..1011681680791596.1876268-CDS-P-littoralis_Contig773:101120..101168Pylaiella littoralis U1_48CDSP-littoralis_Contig773 101121..101168 +
1680791596.1990173-CDS-P-littoralis_Contig773:101537..1016641680791596.1990173-CDS-P-littoralis_Contig773:101537..101664Pylaiella littoralis U1_48CDSP-littoralis_Contig773 101538..101664 +
1680791596.2126963-CDS-P-littoralis_Contig773:102453..1028551680791596.2126963-CDS-P-littoralis_Contig773:102453..102855Pylaiella littoralis U1_48CDSP-littoralis_Contig773 102454..102855 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig773.18.2prot_P-littoralis_Contig773.18.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig773 91300..102855 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig773.18.2

>prot_P-littoralis_Contig773.18.2 ID=prot_P-littoralis_Contig773.18.2|Name=mRNA_P-littoralis_Contig773.18.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=885bp
QSETCYTDENGETVSPEALRRLLRKFGSHEREELLRKLERNARQTFKVGK
LNLVDLAGSERVRLSGATGQRLQESKKINQSLSALGNVISALTDHRGRQH
IPYRDSKLTRILEDSLGGNCKTTMMAMISPALESMVETLSTVKFASRAKN
IKNQPIVNEDFDQKSLLRKYERELKRLRAELEERSRNLVDKRQLLFVEGE
RRRAEADKMAAIRALEERSLEFQREKEEKRHLEGRIAMLTGQMIGRGRRA
DGGAEGADYADRLADLERERNTIELEKEQICALNDELEASESHQELIEDA
LDMRTQQLFHLQKALVLHSSGGDGGEAVGEGMDQQAPGGWGGIIGTPAAS
SADSKSAGGSGVASPLRSIPHNPNQQQQRRPSTAPPNTTTTNVFSSATPK
NTSAVVNGDRTAARVSDNHHSSQLSSNTASLDDINTNVSDRIRASTAAVT
AATAAAGRDETRQSPPQEDLITFPRFKPHTLMQPTLFSTADPAGGVSLHD
TGILAGGDDEQGGEGDRGGGGGGGSGRVEAAKGAGAGVGGTKLLNAWEKI
EELEGLVESSRSHNERLLEDLEEVQTDKVSMEYLLREKLERLVQSEIEAR
VARMHQDGGVDEILRRELDGLRVEAAARARSEATLREEVRRLKRSAFTQR
PASEHGGVNDDEIRHRESSSEMLTRTTEELKELRAENTKLRRRVYDIYLR
AVRAGHLSSDGKSAKGGESGSKSIAPDGAQGAALQSRCEALLGERKAMQA
RTIMEQKVQVLVDNVADSACAVLNFVVASESDNGNGDGHGNVGGGGGGGG
GGRRGRTGDEGDTTSSSPPPTYATTTKTPIEGPGSSSTTSAATAKDAAAR
ALSKDVGQLRRLVQAAITALRNAEIEDQQRAKDST
back to top

mRNA from alignment at P-littoralis_Contig773:91300..102855+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig773.18.2 ID=mRNA_P-littoralis_Contig773.18.2|Name=mRNA_P-littoralis_Contig773.18.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=11556bp|location=Sequence derived from alignment at P-littoralis_Contig773:91300..102855+ (Pylaiella littoralis U1_48)
CAGAGCGAGACGTGCTACACGGACGAGAACGGGGAGACGGTTAGCCCAGA GGCCCTCCGACGGCTCCTGAGAAAGTTCGGGTCCCACGAGCGGGAGGAGC TGCTGAGAAAGCTGGAGAGGAACGCGCGACAGACGTTTAAGGTGCGATGC GAAAAAGGAAGAAAAATGCGTTTGATAGAACCGAACGAAGCAGGAGGAAG GAACGAAAATAACCGAGAGAGTTGGAGGCAAATCTACTTCACAGAGGCGG TGGACAGCACCCACCGAGAGGGGCCCAAAAGGTTATCCGAGATAATACCT TTGTCCACAGCGGGTGCCCTCGGAGAAACATTCAACGAAGTGCTTCGTAT CTCCTGTGAGTAGCAGCAGACTTTTTCAAGTAATCGCTCAGCATATATGG AAGGCCTGAGAAAATGTATCCACTTCGTCGACGCCACTATGGAAGGCCTC TACTCGCTACAGTAAGGTCCCTTGACGTGGTAACTTTTATAACCCGTTAC CGTAGGTGGGGCTAATGTTTCCTCTCGTTGCAGCGTAACGAGGAATGTCA AGCGATGGCCGAGCTGAGCTCGATCAGGGCTAGGTAGAGAGAGTGTGGCA AGGGAGGCCATCGTGGGCCTTCCTTAATCCCACGAATCCGGTCATGGTCG CAATCTCACTTCCAGATTATCTGTGTCCAGGGTTCGGAGATCGTGGGATA CTATATTTGTCCGATAGATCTCCTAATCTGTCCGTTATGTATGCGTTCCT GTATTCCCTAGGAAGATGCAAATCCATGGTATCTACACACACATATATAT ATAAATCAACACACCAAACGCCTAACCTTTCGTGCATGCGCGCCCCATCC ACACCCTCTGAACGCAAAGGTCGGCAAGCTCAACCTGGTTGATCTGGCGG GGTCCGAGCGTGTGAGGCTGTCCGGTGCAACGGGGCAGCGCTTGCAGGAG AGCAAGAAGATTAACCAGTCTCTTTCAGCCCTCGGAAACGTCATCTCGGC CCTCACGGACCATCGGGGGAGGCAGCACATCCCGTATCGTGATTCAAAAC TCACCCGAATTCTAGAAGACAGGTGAGTGCCGGGTCGAGCTGGGTCGAGC TACCCTTTTTCTCTATTCCCTGCTGGCACGTTTTCTTTAAAATGACTTTA AGGCCACTGGCTAGATTTGGCGATAATAAATTCGAGACAAAACAACAACA ACAACAACAACAACACCTAGTTTGTGCTTTTACCGCGCCGTGAATCAACG AAAGCGTGTGAAACCAAGGAATATTGCTCTTATATGCGGCATGTAGAGCT GACCCCCCGAATATACCCCGCCTGCCATCCAATGTCTGTATTGTGCCCGC TCTTGTTTCTTGTGTATATTTTTTGTGTGTTTTGGTGTGTGTACGTGCGC GCGTATGACTTTCTACCACTTCTACTGCTGCTACTACTTCTACGACAACG ACAACGACAACTACAACTACAACCACAATAACCGGCAACCAATGAAGCCT CGGAGGGAACTGTAAAACGACGATGATGGCCATGATCAGCCCGGCGCTGG AGAGCATGGTGGAGACCCTCTCTACGGTGAAGTTCGCGAGCAGGGCGAAG AACATCAAGAATCAGCCCATCGTCAACGAAGATTTCGACCAAAAGGTGTA TATTCTACGTTGGACACACTTCGAAATGGATCAACATGGTGTCAAACAGG CTTTCTATTGCAACATACTACACGCACGATTGATACGGAGACGAACTTCT TGCTGTTCGCAGAAGTCTCGACAAAGGAATCGTGTTTAGTTTTCGGCACT GTAGGGGTGTTCATCATGTGCACACGAGAGATACCCTCCCTTACTGGCTG CCCGTGAGTTCTGTCCCAATCAATGTGTTCCCGTAGTGTGAGGCGTTTAC GCAAAGTCCCTTCCGAGAAAAACGTGTTACACACGTGTCCCAAGCGTTGC ATCCCAGAAAACAAGCTGGTACACTCGTGTTACAACCGGTTTACCTACCA GCCCTCCGCAAGAGAATAGACCATCAACGCCAAGACATCACATACACGAG CGAGCGAGAGAGAGCTCAACCCCACCCCGTAGCTTACATCTACCGAGAGA AATACATACACACAGACGCACACGCACACACACGAGCGAGGGCTTAATCC CGCCCCGCCCGTTACTTCTCCCTGCAAAAACACTTAGTCATTGCTCAGGA AGTACGAGCGAGAGCTGAAACGACTGAGGGCGGAGCTCGAGGAACGGAGC CGAAACCTCGTGGACAAGCGGCAGCTCCTATTCGTCGAGGGGGAGAGAAG GCGCGCCGAAGCCGATAAAATGGCGGCTATTCGGGCTCTTGAGGTACGGT CAGCACATGCAGCAACGCGTCCGTCGGAAACAACCCTCTTTACGAAGCAA ACAATGCAGTTTCAGTGTCAAAATTCAAATATCAGACCTTGTGGAACGTT GTGCGCTGTAAATGAAGTAAGTAAGGGAGATGAGATGAAATACGGGAGAC GCTCTTGTGGTACTTCGCCAAAGTTCAGAGTGTCTTGTGCTGTGGTCGGC CGCGTGCTGCACTTACTTCCGTCACGAGCTCTGTGCGATCCACTTGTCAT CGTATGCGGTACCTAATTCAATACTGGCGCGCGTCTCCGAGTTTTGTGGA ACTTGTCAAAAGCAATGAACCCCGAAGAATAATTGGCGCGGCAGAAGCTG CGAGGCAGGCTATCAAGGCCAGAACCAACCAATGCGGGTTATCACAGTGG GGGTCCAGATATAGCGGCACGTCGTGCCAGAAGCTGCATGTTGCCTACAC AAGGCGCATGCCGCTATCCATCAACAGCGGTGGTATGCCGCAATATCGGA TGAAAGCGCCACGCGCGATACAACAACAGTACCATACGTGCTCGTGAAGC AAAGTTGTTGACAGAGAGTAGACCATAAGTGCTAGCTCAACCCCACCTAT AGGAGCTCTGACTTCCGCCGAGAGGGGTTCCGTCTTTGAAGGGATGGGAG TCAACGACAAAACGGCTGAATGAAGCTCCAAACAAGTATCGTCTCCCGCC CCAATCGATGAGCTACCAAGAATCGTGTGATAACCTTCATTTTTTCAGGA GCGCTCCTTGGAGTTCCAAAGAGAGAAGGAAGAAAAACGCCACCTGGAAG GTCGCATCGCCATGCTCACCGGACAAATGATCGGGAGGGGTAGGCGCGCA GATGGGGGCGCCGAAGGAGCGGTGAGACATGCCTAGCGCCAGCAACGGGT GTTTTTCATCGGCTTGAAGTGTTCTTCGCCGCCCGTAAACGCTTGGCTTC TGCGCAACTCAAAACGTGCTCCATCCTTTTCACTATAGCTGTCCTCTCGA CGTTGCTCTACGGTGTTTACCCGCCTTAAGCGAAGGCAGGACTCCTCAAA GACGTTCGAGGCATCCCCTTTCTGTCTTCAATGGCAGCTCTCTGGCGAAT GAATTATTTGTTCTCTCGCAAGTTTGCACACACTTGTGCAACGGGCTTTT GGCCCTCGTTTTTGAGTTTCAAGAGCAAGCAGCATGTTGTTTCGGTCGTA CGTACGGAAGCTAACACCATTTTACCAGCACTTCTTGATTTGAAACTAAT TCGATGGTGCCGCACTTCATCCCTTTTTGTGCTGTTGGTGCTGTTGGTGA TGATGTTGATCCTGATGCTGCTGCTGCCGTTGCTGCTGTTGGTGATGATG TTGATCCGAATGCTGCTGCTGCTGCACCTGCTGTTGGTGGCGATGGTGGT GGCTCTGCTGTTGGTACTGTGCTGTGGGTGTCGCTGCCGCCCCACCGAAC TCGCGGAAAGGACTATGCTGACCGTCTGGCAGATCTCGAGCGAGAGCGGA ACACGATCGAGCTGGAGAAAGAGCAGGTCACGGCAATTCAGAAGCCCATC TAACTACTGTAGGCGGACACGGAAACGCGGTTGGTTTTGAAAATCGCTTT TTTTCCAACTTGTCGGCTTCGAAGGGAGAATACTGTATCACATTCGGCTA CGAGTATGGCACTGACACAGGCGGGAAATCGGCCAAGCGCACCGTCAGTC GGATATTGGTGAAGCCTCGGAAGGGCCTGCACAGCAGTTGAACGCTGGAG AATTGTAATAATGCTAACTTCCGCTTGGACAAAGCGGGAGGAAACGAGAT AAACACTGAACGGCTAGATATGCCTCCAGCAAGATTCGTACAGCTGTCCG ACGGCTTCCATTTGGTTAGCGGTCGGGGATGTGAAAAGCAAAACGGACAT GACGAATAGCTACTTCTCTATATCTCACGTTCAGCTCTTCAAGTTCATTC CACAGAACGGTTGAGAATTGAAGAACGCCCAACAATAGGCAACTCAGCTC GCCCTACCTTCACTTGGCACCCGGCGGCGTTTTCGTCCGCGTTTCGACGC CCGGCACACTACTGGCAGGTGGAGAGGTACAAGCAACTGCTGATGAAGCA GAGGGACATCATGATAGCTTTGACGCAGCGGCTCAACGAGAGGGACGATG CGGTGAGTGCAACAGGTTCAAGAGCAATAGGGCCGAGGGGAGGTATCCTC CTTTCGTCCCCTGAGCATCCAGACCACTCCACAAGTACGACGTTTGAATC GCACCCTTGGACTTCGTAATACCCAGGTGTTTGCAGTGCACCTTTGCTGT TTTGTGTCGCTTTGTTGAACAAAGTTCTGGTAATTCGGGGCAGTGTCATT GCGGATTGTCGGTGTCGTCAACTGCGCGGGCCTGAGGAAGGTTTCTTTTG ATGGGTGCTGGGTGGTCTTCGTCGCCGGGAAAGGAATAGGCGACCTTCCT TGGTCGCATTCGATACGATAGGGTGAAAGAACGTCAATCAGCCCTGTCCC TGAAAGTTGTTGGTGTTCTTGTTGTTGTTGTTGATGATTTTTCACGTCAG CTCATCGCAAGAATCTAGGCCGTGGTCACAAGCCAGGCTACAAATAGCGC CACAGAAGAAAAAATAGAAAAGTACAGTTGAAAAAAGTGATGTGCAGCTT CGAGAATAGGCGATACGTTCTGGTGGGGTGAGTGCTATCTGTCGTTGCCA GGGGTGGCGTGCTTTCCACACACCAGAACCTACTCGAACTGTCTGCGCGA GGAAAGTAAACAAATGAAAATGGTTCTCAGCTCATTGTCCGCACACCAAC TAAACCATCAACGGGTTACAACGCCAGCCACGAGAGACCATGCGTACACC GCGTGAAAGATAGCGCATCTTACTTATCGCGTATACTTCAGCGTGTTTGG CGCGCATTGGCAAGCGTCGTTAGTCTCGCCAAACAGACGACAACTTTCAG GAGGGGGAAGGCTTGATCTGTGGAGTAGTATGCACACTTTTACGCGTCAA CGCTGACACTTACATGCATGGGTTGTCGACAAAAAAACTGAATCGGTCAG TCGCCCACTCTTACATAGAACAGTCCAATCAAATCGAAATCAACGGTTGT TACCTTCCTTTGCGTGTGCGTGTCTCCTGTCCACACCATTCGCACCACGC GAAAACAGATTTGCGCCCTTAATGACGAGCTAGAGGCGAGCGAGAGCCAC CAGGAGGTGAGCTTCCGAAACCAAGGTTTGTTGCTCATTCTTTGCCACCT TTTTTATTTGTGCAAATCACTTGCTGCCGAGTAACATCATCGTGAACGAA AGGTGGAAGGAATCATTTCATTGAAAAGCAAGAAAAGTCGAGCATGTCTG TGTCCCCATTGATGAGCCGACGGTGAGAGCGAGAGCCCACACTCGCCGCA CCGTTTGAGGGAACAAGTCATGGTTCAGGCTTTGCTTATACATATCTCAT CCGTTTCACTTCGTCCGTTGCTGTAGCCAGAACACAAGAGAAATTGCTGC CAGTTGTGTCCAGAGCTCGCTGATACCTCAAACATGTGTAAACCACCGTA ATGAACGGAATAGTCCCCCCGCCCTTGGCTGTGTTCTCGTGTTTATGTTC GGCGACAGCAGCGGGGAAGGTACGAAACGTATTTACCTAGTACACCAATG ATAAGTGTAATTTTCGTAATTTCTTATTTTGTGAAACACCTCGTCGAGAT CTCTCTGACGATAATTTGGTCGGTGCCTGCATTTCTCTCGTGGTGGACAA AAAACCGTCCCCGAGAACCAACCGGGGGGGGGTAGCTTGTACCACGTTCC TGGCGGTGCCTCATCCCCGCTCCTCCTGCCCAACAACAACCAACCATGCC AACAGTTTTCCACGCTACGTATCCAAAATACTTGTTTGAACGCAGCTAAT AGAGGACGCGCTGGACATGCGGACACAGCAGTTGTTCCACCTGCAGAAGG CGTTGGTGTTGCACAGCAGTGGAGGTGACGGAGGGGAAGCCGTTGGGGAG GGTATGGACCAGGTGATGTGCTCGTAGGGCTTACTCGTAGGTGTTATCCG TCTGTATGTGTGGTCTCTCGCTCTTTGTCTCTCCCACCCCCCACAACCCC ACATCCATCAATTCATGAATCACGTCGCCACTTACTGGCAAATCATGTGT CTCATAACCGGAACCGTCATGTTAAAAAACTGCTGTAGTTTAGGTGTGAC TTAAACCGTGGTTTTTGGAAAGATAAAAAAAAATGGCTTTCTGAGGCGAT TCAACGTTGTGGTCACCACATGTCGCTATCGAACGTGCGGTGATTGGTCA CTGCCCGAGGAATCTCGTTACTAAACGGATTCAACCTCGTCGCGACTGCC ATTTGCGACGACCCCCCCTGGATCTGAGCAGGCCCCGGGTGGGTGGGGAG GAATTATTGGGACACCGGCGGCATCATCAGCAGATTCAAAATCGGCAGGA GGGTCGGGCGTTGCTTCGCCCCTGCGCTCCATACCGCACAATCCAAACCA GCAACAGCAGCGGCGACCATCTACAGCCCCCCCCAACACGACCACCACCA ACGTGTTTTCCTCCGCCACCCCAAAAAATACGAGTGCCGTCGTCAATGGG GATAGAACGGCGGCAAGGGTATCCGACAATCACCACTCTTCGCAGCTGAG CAGCAACACCGCCTCCTTGGACGACATCAACACCAACGTCAGCGACAGAA TCAGGGCCTCGACGGCTGCAGTAACGGCAGCAACAGCGGCAGCCGGACGG GACGAAACGCGCCAATCCCCTCCCCAAGAAGACCTTATTACGTTTCCCAG GTTCAAGCCGCACACGCTGATGCAGCCAACGCTGTTCAGCACCGCCGACC CCGCGGGCGGGGTTTCCCTCCACGATACGGGCATTCTTGCTGGAGGGGAT GATGAACAGGGGGGAGAAGGCGATCGTGGGGGCGGAGGCGGGGGGGGCTC TGGGCGGGTAGAAGCGGCAAAGGGGGCGGGGGCAGGGGTAGGAGGAACGA AGCTGCTGAACGCATGGGAGAAGATAGAGGAGTTGGAGGGGTTGGTAGAG TCGAGCCGCTCCCACAATGAAAGGTAAAGGGGAGAGAGACAGTGGTCGGA TGCGTTCCACAGTGCCTTTGATTTCATCCGATTTCGAAACATTGACGTCA ACGAAGAGACGCATTTGAGTCTGGCAAAATACGCATTACCGTCAATTACT ACGCGGGGAGGGTCGAACGTTCAAAGTGGAGACTTGAGGTTGTGGTTCTG TGCTCGTCGTTGTTAAGTACGTTATTGTTGTCAAGTACCTAAAGCGGGAA GTGGGGTACACGTTCAAAGCGGAGACTTCAGACGTAGCCCTGTGCTTGTC GTTGAACACGTCCCAAAGGGGAGGTGGGGGCAGAGGTTCAAAGCGGAGAC TCAAGATGCAGCTCTGTGCATTTGTCGTTATTTTTTTTGCCTTTTTCTTG TGCTTCGAAGTAGGCTAGGAAGGCGTTTTTCTATCATTGGACTTTTCTGG ACCAGGTTCACGCTGATGATTGATGATGTCCTTTGGGTGCGTATTGGCCT CTCGGTTTCGTCCTTTTCAGTATTTCGGCGCCATCGAGTGCACATTTCCT TTTTGGACCAGGTTCATGCTGATAATTGGTGATGTCCTTTGGGTGCATCC CGTTTCCGTCCTCTTAAGTATTTCGACGCCATCGAGTGCACACTCGTGCA CGTTTGGAACGTGGTCAATCGCATCGCCATCATGGCTCACTCCGCTTCCC CTTTCGCGCAGATTGCTGGAAGACCTCGAGGAGGTTCAAACCGACAAGGT TTCTATGGAATATCTCCTTCGCGAGAAGCTTGAGCGGCTGGTCCAGTCTG AGATAGAAGCGAGGGTCGCTAGGATGCACCAGGTACGCTTTGCCGCACTG CTGCTATTGTTCGTGCTGCTGCCACTGATGCTCTTGCTGTTGCCGTTATC AGAACCTTTCCGACCCCCATCTAGTACCTTCACACGTGATATGCCATGTC TAAGCTAGTGATAGAGAGCGGTAAATCTCCAACAATCTGTCCCCGTGCTG TTGACTACGTAGAGAGTCGTACGTTGTGGCACTGGCATTGTTGACCTTTA CAACAATCAGTACACGGTACACGCCTCTCCCTTCTCTGTGTGTGCAGCTT CAATCGCTACTTCCTGGTCATGTCAACTACTATCATGGCAAAAATCCCCG AAAAATGTTGCGTTTTTTAACGGGTCTGTTGAAACCGCCTTCCAATTCAC GACGCCTCCAATCCTCACCACAATTGACCATAGAGGCCCTCTTTTTACTA CCTTCCCCGCCCCCAATCATTTCAAGGATGGTGGAGTTGACGAGATACTG AGGCGTGAGCTGGACGGGCTGAGGGTAGAGGCGGCGGCGAGGGCCAGGAG CGAAGCCACTCTCAGGGAAGAAGTCCGGCGTCTCAAGCGCAGGTTTGCAA AAAAGAAAGAGAGGCGTATCTCAGTGAGAACAGGGCCTTTGAGCGCCCCG ATAGACTGTAGAGCGCAGAGAGACATGTGTCAAGTGAGTAGAGGTACTGC AACAAATACTAATAATAATTGTGGTTCTCCAGCTCTACCTCTTCACAACC AGCCAAAGATAGATCGCGACGCGAGAGAAGATCTAGAAACAAATCTGAGG CAGAAAGGCTGAGCATATCGTGTAGGATCGAAAATGCAAAAGCTGTTGTG TGCATTCAGGTTGCGCTACTTTTACCTCAAAATTGCGAGCTGTTTTCTCT GTTCGCTCTCTGGGAGCGAGAGGGAGTTCCATTTCTTGCGTTTGAAAGTT GCCGCCCGGAATATGATATGAGCCTTTACCTTTCGGCGACCTTAATGTGT GTATACGGACCTTTTCTAACAGGGGTAACTTGGGACGCTTTTAAGGGAGA GGAGATGAGCGATTGCAGGAACACAACGGTGCCGTCACTACGACCTTTTC TTCAATTAAATGCGACGCCCGTGGCATTGACATGAATGCGTGGAACTTAT TAAAACAAAATGTTGCAGCTCCGGTGAAAAGCGAGAGTGAGCACCGTCGT CGCAGGCTCGGTCCTGCACTCCCACTTCTTCAAAACCAACAGCCTTAATC TCGCGGAACAAAGGTATTGCTGTTGCTTTTAATGATACAATGTCTTGATC TGATCTGATTGATCCGACTTTGACCGCTCTCACGACACAAAAAATTATGT CGTCCTCAAAATCAAAATCTTCCTTGCCGGTGTATTTTTTGTGCCGTCGG GGGGGGGGGCGGGGTTCGTGCACACTCTCACGTACGTACCATGTATAGCG CCTTCACGCAACGCCCTGCAAGTGAACACGGAGGGGTGAACGACGACGAA ATCCGCCACAGAGAAAGTTCAAGTGAGATGCTCACCAGGACGACCGAGGA GCTCAAGGAGCTCCGCGCTGAGAATACAAAACTTCGGAGGCGGTTGCATC CCGGCGGGAAGGTGCGCAAAGGGTATACGATATATACTTGCGTGCGGTAC GAGCTGGACACTTGTCGTCGTCGTCGTTGTTGTTGTTGCTGTCGTCCTGC ACCTGTATTGGCACCACGAGTCTCTCTGGTGTTTTCGTGCATACCTGTAG AGACGAGTTGTATAGTACAGTTGATGCGGCGCCGCCTCGACGGCTTGGTT CGTTTGTGATTGCTCTCACGACTTGGCGGGAAGGACCTACATTTATTACC GTCCAAAGCTCCAAAAAGGAATGCGCTTCATATCACACACGGCCATACTA TGATATGTATCGTGGAAAAAAACGAATCTCACCGCCCTTCCCAGCGATCG AAACGGATTTTTCAGACGATTATCCCCTTAAACCAAAAGGAATCGGTGTG GTCGTTTTTCGTCGCGTGGGGCAGGATTGCGCGACGAGAGACGGAAAATC GGCTAAAGGGGGGGAAAGCGGCAGCAAGAGCATAGCCCCAGACGGTGCCC AGGGAGCGGCGCTACAGAGCCGCTGCGAGGCGTTGCTGGGCGAACGGAAG GCGATGCAGGCGCGTGTGACGGTGGACATCCGCTCAGCGAACAGTGAACA ACACATTGCAGCAGAACATAACACCTACAGTAGCTCAATAAGAAACGCTT GATGTGTTTGCCCCGGGTCTTACGTTTGCTCTTGGGAAATCGTGGCTCAT GCGCTTATTTCACCACTCAGTGTGATCTGCCAGACTGGCTGACTTTCCTG GAAGATCTAGCCGAGGGTTGGGGATCTGCAGCAAAAATCGCACTACTGTA GGCTGTAGGTGGGGCGGGATTGTTCATGTTTGTAAGTTTATCTTGTTTTC CTCTTAGTGTTGATCGATCGCGGGGTCAAAGCGCCAAAAGACGGAGCGGG GAGGAGGGGACGAGATCGAACATGTTTTATCCATGAGAAAAATCAGTGTA ACATATAGTCATGTGGTAAGTGACGGGTAGTGACCTTCAGCCGCCCGCTC TCCGAAAACCTTGGTACAGTACTACGGATCAAATTTACTCGGGACATTTA GTCGCGGGTTGCTTCGTTCTTCTGGCTTTGGCCGTTGGACCGTTCTCACT GTAGCCCTCTGAAGGTATAATTGAAACACCTACGCTTTTCAGGCGAGAGT CAAGAAAGATGCAGCCTTCAAACATTAACCTTCTTGTCGAGTCTCATGCC GGTAACAAAAAATGCCAGCAGGTCCTTGTACAGGAGTACCAAGAGCCGTG CTGTTTGAACTGTGTTCACCTAGATCAGCCTTCCTCACCCCCTCCCCTCC CCTCCCCGCAACCACCTGTGTTTTCCCCTCGCCTGCAACCAATAATCCTT CCAGACTATCATGGAGCAAAAGGTGCAAGTGCTCGTCGATAACGTGGCGG ATTCCGCGTGCGCGGTTCTCAATTTCGTCGTCGCCTCGGAAAGTGACAAC GGCAACGGCGACGGCCACGGCAACGTCGGTGGTGGTGGTGGTGGTGGTGG TGGTGGCCGTCGTGGCCGCACCGGCGACGAAGGGGATACGACTTCATCGT CACCACCACCGACATATGCAACAACAACAAAAACACCCATAGAAGGGCCG GGGTCTTCGTCTACTACATCCGCGGCAACCGCTAAGGACGCGGCAGCCCG GGCACTGAGCAAAGACGTCGGCCAGTTGAGAAGGCTCGTTCAGGCCGCCA TCACGGCGCTTCGGAACGCTGAGATCGAAGACCAGCAGCGGGCGAAGGAC AGCACG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig773:91300..102855+

>mRNA_P-littoralis_Contig773.18.2 ID=mRNA_P-littoralis_Contig773.18.2|Name=mRNA_P-littoralis_Contig773.18.2|organism=Pylaiella littoralis U1_48|type=CDS|length=2655bp|location=Sequence derived from alignment at P-littoralis_Contig773:91300..102855+ (Pylaiella littoralis U1_48)
CAGAGCGAGACGTGCTACACGGACGAGAACGGGGAGACGGTTAGCCCAGA
GGCCCTCCGACGGCTCCTGAGAAAGTTCGGGTCCCACGAGCGGGAGGAGC
TGCTGAGAAAGCTGGAGAGGAACGCGCGACAGACGTTTAAGGTCGGCAAG
CTCAACCTGGTTGATCTGGCGGGGTCCGAGCGTGTGAGGCTGTCCGGTGC
AACGGGGCAGCGCTTGCAGGAGAGCAAGAAGATTAACCAGTCTCTTTCAG
CCCTCGGAAACGTCATCTCGGCCCTCACGGACCATCGGGGGAGGCAGCAC
ATCCCGTATCGTGATTCAAAACTCACCCGAATTCTAGAAGACAGCCTCGG
AGGGAACTGTAAAACGACGATGATGGCCATGATCAGCCCGGCGCTGGAGA
GCATGGTGGAGACCCTCTCTACGGTGAAGTTCGCGAGCAGGGCGAAGAAC
ATCAAGAATCAGCCCATCGTCAACGAAGATTTCGACCAAAAGTCATTGCT
CAGGAAGTACGAGCGAGAGCTGAAACGACTGAGGGCGGAGCTCGAGGAAC
GGAGCCGAAACCTCGTGGACAAGCGGCAGCTCCTATTCGTCGAGGGGGAG
AGAAGGCGCGCCGAAGCCGATAAAATGGCGGCTATTCGGGCTCTTGAGGA
GCGCTCCTTGGAGTTCCAAAGAGAGAAGGAAGAAAAACGCCACCTGGAAG
GTCGCATCGCCATGCTCACCGGACAAATGATCGGGAGGGGTAGGCGCGCA
GATGGGGGCGCCGAAGGAGCGGACTATGCTGACCGTCTGGCAGATCTCGA
GCGAGAGCGGAACACGATCGAGCTGGAGAAAGAGCAGATTTGCGCCCTTA
ATGACGAGCTAGAGGCGAGCGAGAGCCACCAGGAGCTAATAGAGGACGCG
CTGGACATGCGGACACAGCAGTTGTTCCACCTGCAGAAGGCGTTGGTGTT
GCACAGCAGTGGAGGTGACGGAGGGGAAGCCGTTGGGGAGGGTATGGACC
AGCAGGCCCCGGGTGGGTGGGGAGGAATTATTGGGACACCGGCGGCATCA
TCAGCAGATTCAAAATCGGCAGGAGGGTCGGGCGTTGCTTCGCCCCTGCG
CTCCATACCGCACAATCCAAACCAGCAACAGCAGCGGCGACCATCTACAG
CCCCCCCCAACACGACCACCACCAACGTGTTTTCCTCCGCCACCCCAAAA
AATACGAGTGCCGTCGTCAATGGGGATAGAACGGCGGCAAGGGTATCCGA
CAATCACCACTCTTCGCAGCTGAGCAGCAACACCGCCTCCTTGGACGACA
TCAACACCAACGTCAGCGACAGAATCAGGGCCTCGACGGCTGCAGTAACG
GCAGCAACAGCGGCAGCCGGACGGGACGAAACGCGCCAATCCCCTCCCCA
AGAAGACCTTATTACGTTTCCCAGGTTCAAGCCGCACACGCTGATGCAGC
CAACGCTGTTCAGCACCGCCGACCCCGCGGGCGGGGTTTCCCTCCACGAT
ACGGGCATTCTTGCTGGAGGGGATGATGAACAGGGGGGAGAAGGCGATCG
TGGGGGCGGAGGCGGGGGGGGCTCTGGGCGGGTAGAAGCGGCAAAGGGGG
CGGGGGCAGGGGTAGGAGGAACGAAGCTGCTGAACGCATGGGAGAAGATA
GAGGAGTTGGAGGGGTTGGTAGAGTCGAGCCGCTCCCACAATGAAAGATT
GCTGGAAGACCTCGAGGAGGTTCAAACCGACAAGGTTTCTATGGAATATC
TCCTTCGCGAGAAGCTTGAGCGGCTGGTCCAGTCTGAGATAGAAGCGAGG
GTCGCTAGGATGCACCAGGATGGTGGAGTTGACGAGATACTGAGGCGTGA
GCTGGACGGGCTGAGGGTAGAGGCGGCGGCGAGGGCCAGGAGCGAAGCCA
CTCTCAGGGAAGAAGTCCGGCGTCTCAAGCGCAGCGCCTTCACGCAACGC
CCTGCAAGTGAACACGGAGGGGTGAACGACGACGAAATCCGCCACAGAGA
AAGTTCAAGTGAGATGCTCACCAGGACGACCGAGGAGCTCAAGGAGCTCC
GCGCTGAGAATACAAAACTTCGGAGGCGGGTATACGATATATACTTGCGT
GCGGTACGAGCTGGACACTTGTCGTCAGACGGAAAATCGGCTAAAGGGGG
GGAAAGCGGCAGCAAGAGCATAGCCCCAGACGGTGCCCAGGGAGCGGCGC
TACAGAGCCGCTGCGAGGCGTTGCTGGGCGAACGGAAGGCGATGCAGGCG
CGTACTATCATGGAGCAAAAGGTGCAAGTGCTCGTCGATAACGTGGCGGA
TTCCGCGTGCGCGGTTCTCAATTTCGTCGTCGCCTCGGAAAGTGACAACG
GCAACGGCGACGGCCACGGCAACGTCGGTGGTGGTGGTGGTGGTGGTGGT
GGTGGCCGTCGTGGCCGCACCGGCGACGAAGGGGATACGACTTCATCGTC
ACCACCACCGACATATGCAACAACAACAAAAACACCCATAGAAGGGCCGG
GGTCTTCGTCTACTACATCCGCGGCAACCGCTAAGGACGCGGCAGCCCGG
GCACTGAGCAAAGACGTCGGCCAGTTGAGAAGGCTCGTTCAGGCCGCCAT
CACGGCGCTTCGGAACGCTGAGATCGAAGACCAGCAGCGGGCGAAGGACA
GCACG
back to top