mRNA_P-littoralis_Contig773.14.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig773.14.2 vs. uniprot
Match: A0A6H5J7K3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7K3_9PHAE) HSP 1 Score: 553 bits (1425), Expect = 1.640e-171 Identity = 565/1109 (50.95%), Postives = 656/1109 (59.15%), Query Frame = 1
Query: 181 MPNLAFSP-GPQQP------SGEKENA--SSTPPKSSNGGGINKKIAGELFAAGGRSSTGSVGRSPLESLAAAPTSGGSVVQCKRDSSCKCPDCDMAASVFGIDELRRVGXXXXXXXXXXXXXXXXXXXXSGGLARSPLRGNSVGGVTLVEPDVDTAPTSPLVADVAADALADAVDVVEDDPHEVETQQPAAVASPSPSPLAV---VAPPVAPSAAIPSTSTHSCDAGDVMPSRAKEAATLPXXXXXXXXXXXXXVEDKDPGVVEGQRLGQDGAEELAAAERAGDGGGTPAPAQGTATAESGGSSKKTGWGFRMARAVFSPKSPKKNMRQGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADDDVLMPTAVGVTVADNLCNSGGMTGEVTGDEDDLASDDGLDKDEAEEEVEEPAEHEEGDAVAAAVGRGTCRPPLLPGKNGNKSGGDXXXXXXXXXXXNLGVNKNAAASGAAGAPFLDVVLGK--GASRRRSSSGRRLSKDVFYECSSEVEHVLASDSESDFDDAN----AVKEQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAIGESNXXXXXXXXXXXXVTSATPITPAXXXXXXXXXXXXXXXXXXXXXGVGAEATKDV--------AGTTARGKGAHEGVFPGAPAVSAAVAASRPXXXXXXXXXXXXXXXXATEVEPANGNNADKPFPQD-----DSSQARGGEARGFPGLGRRRNRRQAPQLELGMAEAYGHEDDRAKFSQAEVDAKIRESSAEERAVFERKVSSLRAAHEAELQAAAEKLARSSSDGNRAKIAARDAEALEREIAMLSERYGEAAAEARTSGKALREKEALLDAVTAQLMGLKADLASSRAEHAAEKQATDGTAEAERRARSLAEGSLQQLEMAYNKLEDSEREKRAAGILKMKQDMQALARAQFAEANKKYTALRAKLERCEAQGRLLETAAANKDAQMLAAKQKTDELQVQVEALQKAQEESAANASRREHLLEEEARLLRDEGESRLNELETMIRERDAAMNGRDVSQDALARMAIRNTQMKESVADLESKVKELEGFCTEALDELDAEKYKNA 3414
MPNLAFSP GPQ P SGEKENA +S+PP G + KK + AAG +V RSPLESL T+G S+V CKRDS+CKCPDCDMAA+VFGI++LR+V XX LARSPL G + V +PD +P A E E Q AAV P P+ V APPV SAA DV PS K T +++D V + GA E AA GG TPA A+A+S GS K GWGFRMARAVFSP SP+K XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXX AD+++ P++ G + D G TG G++D L+ D XXXXXXXXXXX + + N A+G A +DV LG+ A+ RR+SSGRRLSKD F+ECSSEVEHVLASDSESD D + + KEQA+ XXXXXXXXXX XXXXXXXXXXXX A+ TP A+ +DV A + KG V GA A A++ AT +G AD ++ D +Q++ G ARG GLGRRRNRRQ QLELGMAEAYGHED RAKFSQAEVDAKI+E AEE+A FE+ VS+L+A H+A+LQAAA+KL +SSSDGNRAKIAARDAEALEREIAMLSERYGEAAAEA+ SGK L EKEALLDAVTAQLMGLK+DLA++RAEHAAEK+ TA++ERRARSLAE LQQLE AYNKLEDSEREKRAAGILKMK DM+ALA+ QFA ANK++ ALRA+LER EAQ RLLE AA + +A++ A QK+ EL+ QVEALQK + E+AANASRREH+L++EA LR+E ESRL+E+E M RERDAA NGRDVSQDALARMAIRNTQ+KESVADLE KVKELEGFCTEALDELD EK KNA
Sbjct: 1 MPNLAFSPVGPQHPPLHDRGSGEKENAHTASSPPV----GSVTKKAT--VAAAGS-----TVVRSPLESL----TAGTSIV-CKRDSTCKCPDCDMAAAVFGINDLRQVAGGGGIPSSPTASGIPPPSXXXA-LARSPLAGGASRDVARDDPDGALPTWTPAPA------------------VEGEGLQEAAVMPPKPAVAGVDSPAAPPVPDSAA-----------RDVPPSVKKADVTA---------MPSAPADERDAAVHKQPGESSGGASETAA------GGETPA----AASAKSAGSKK--GWGFRMARAVFSPLSPRKXXXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPPLVETTVEPAAXXXXXXXXXLAPPADNEI--PSSAGAGMGDG--GKHGNTGAADGNDDLLSGDXXX-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPRDSNDTATGGAACGGMDVFLGERSAAAARRASSGRRLSKDRFFECSSEVEHVLASDSESDSGDKDVDPFSSKEQASESEQAAEQPTSPVNETNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRASSATPMSLLSVVEADSPAAALEAAVATAKVADVNRDVEPRGMTVAANSAPSQKGEEADVDGGAAAPGDEATATQ--------------AATATHTPERSGGEADAHDGKEKSAARDEAQSQAGGARGLMGLGRRRNRRQGTQLELGMAEAYGHEDHRAKFSQAEVDAKIKERLAEEQAAFEKTVSALKATHDADLQAAADKLQQSSSDGNRAKIAARDAEALEREIAMLSERYGEAAAEAKHSGKMLLEKEALLDAVTAQLMGLKSDLATTRAEHAAEKRRMTETADSERRARSLAESKLQQLEAAYNKLEDSEREKRAAGILKMKNDMKALAQQQFAGANKQHAALRARLERSEAQIRLLEEAAKDLNAKLETAGQKSTELRGQVEALQKEKAEAAANASRREHVLQQEATALRNEAESRLDEMEAMARERDAANNGRDVSQDALARMAIRNTQLKESVADLEGKVKELEGFCTEALDELDREKAKNA 1009
BLAST of mRNA_P-littoralis_Contig773.14.2 vs. uniprot
Match: D7FRV0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV0_ECTSI) HSP 1 Score: 516 bits (1330), Expect = 1.370e-157 Identity = 535/1138 (47.01%), Postives = 630/1138 (55.36%), Query Frame = 1
Query: 181 MPNLAFSP-GPQQP------SGEKENAS--STPPKSSNGGGINKKIAGELFAAGGRSSTGSVGRSPLESLAAAPTSGGSVVQCKRDSSCKCPDCDMAASVFGIDELRRVGXXXXXXXXXXXXXXXXXXXXSGGLARSPLRGN--SVGGVTLVEPDVDTAPTSPLVADVAADALADAVDVVEDDPH-EVETQQPAAVASPSPSPLAVVAPPVAPSAAIPSTSTHSCDAGDVMPSRAKEAATLPXXXXXXXXXXXXXVEDKDPGVVEGQRLGQDGAEELAAAERAGDGGGTPAPAQGTATAESGGSSKKTGWGFRMARAVFSPKSPKKNMR-----QGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADDDVLMPTAVGVTVADNLCNSGGMTGEVTGDEDDLASDDGLDKDEAEEEVEEPAEHEEGDAVAAAVGRGTCRPPLLPGKNGNKSGGDXXXXXXXXXXXNLGVNKNAAASGAAGAPFLDVVLGK-----GASRRRSSSGRRLSKDVFYECSSEVEHVLASDSESDFDDAN----AVKEQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAIGESNXXXXXXXXXXXXVTSATPITPAXXXXXXXXXXXXXXXXXXXXXGV-------GAEATKDVAGTTARGKGAHEGVFPGAPAVSAAVAASR-------PXXXXXXXXXXXXXXXXATEVEPA-------------NGNNADKPFPQDDSSQARGGEARGFPGLGRRRNRRQAPQLELGMAEAYGHEDDRAKFSQAEVDAKIRESSAEERAVFERKVSSLRAAHEAELQAAAEKLARSSSDGNRAKIAARDAEALEREIAMLSERYGEAAAEARTSGKALREKEALLDAVTAQLMGLKADLASSRAEHAAEKQATDGTAEAERRARSLAEGSLQQLEMAYNKLEDSEREKRAAGILKMKQDMQALARAQFAEANKKYTALRAKLERCEAQGRLLETAAANKDAQMLAAKQKTDELQVQVEALQKAQEESAANASRREHLLEEEARLLRDEGESRLNELETMIRERDAAMNGRDVSQDALARMAIRNTQMKESVADLESKVKELEGFCTEALDELDAEKYKNAKLMAAVG 3435
MPNLAFSP GPQQP SGEKENA+ S+PP G I KK A + AG +V RSPLESLAA G+ + CKRDS+CKCPDCDMAA+VF I++LR+VG GG+ SP G GV S DVA D A+ P E E +Q AAV P P+ V +P +P +P ++ + +P AK+A K PG G GA E AA GG TPA A+A+S GS KK GWGFRMARAVFSP SP++ + G S XXXXXXXXXXXXXXXXXXXXXXX D+++ G+ N+G G DDL S D E A XXXXXXXXXXX +DV LG+ SGRRLSKD ++ECSSEVEHVLASDSESD D + + KEQA + E+N ++S+ P XXXXXXXXXXXXXXXXXXXX + A + A A+ + V PG V+A A S+ P AT + A N ++ + D +Q++ G ARG GLGRRRNRRQ QLELGMAEAYGHED RAKFSQAEVDAKI+E AEE++ FE+ VS L++ HEA+LQAAA+KL +SSSDGNRAKIAARDAEALEREIAMLSERYGEAAAEA+ SGK L EKEALLDAVTAQLMGLK+DLA++RAEHAAEKQ TA++ERRARSLAE LQQLE+AYNKLEDSEREKRAAGILKMK DM+ALA+ QFA ANK++ ALRA+LER EAQ RLLE AA +A++ A QK+ EL QVEALQ + E+AA+ASRREH+L++EA LR++ ESRL+E+E M RERDAA +GRDVSQDALARMAIRNTQ+KESVADLE KVKELEGFCTEALDELD EK KNAK + A G
Sbjct: 1 MPNLAFSPVGPQQPPLHDRGSGEKENANAASSPPV----GSITKKAA--VAPAGS-----TVVRSPLESLAA-----GTSIVCKRDSTCKCPDCDMAAAVFDINDLRQVGG-------------------GGGIPSSPTAGGIPPPSGVXXXXXXXXXGGAS---RDVARDDHDGALPTWTPAPAGEGEGRQEAAVMPPKPAVAVVDSPAASP---VPDSAARN------VPHNAKKADMTATSSAPDGEHDAAV--HKQPGESCG------GASETAA------GGETPA----AASAKSAGSKKK-GWGFRMARAVFSPLSPRRKQQGDAGGDGKSGTTAALAGELDDEATAAAAGAPPLVETTVELSATAXXXXXXXXXXXXXXXXXXXXXXXXDNEIPSSAGAGMGAGGKHGNTGAADG--NDGNDDLLSGD------------ESAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDVFLGERXXXXXXXXXXXXSGRRLSKDRYFECSSEVEHVLASDSESDSGDKDVDPSSSKEQALESEQTSEQPAPP------------------VNETNSDR---------ISSSLAAAPXXXXXXXXXXXXXXXXXXXXXMSLLPVVEADSPAAALEAAVAAAKAADVNGDVEPGGITVAADSAPSQKVLVRVAPGEETDVDVGAAAPADEATATQAATATYPPEGSGGEANAHDGKEKGAAQDEAQSQAGGARGLMGLGRRRNRRQGTQLELGMAEAYGHEDHRAKFSQAEVDAKIKERLAEEQSAFEKTVSGLKSTHEADLQAAADKLQQSSSDGNRAKIAARDAEALEREIAMLSERYGEAAAEAKHSGKILLEKEALLDAVTAQLMGLKSDLATTRAEHAAEKQRMTETADSERRARSLAESRLQQLEVAYNKLEDSEREKRAAGILKMKNDMKALAQQQFAGANKQHAALRARLERSEAQTRLLEEAAKEFNAKLETAGQKSTELSGQVEALQNEKVEAAASASRREHVLQQEATALRNDAESRLDEMEAMARERDAANSGRDVSQDALARMAIRNTQLKESVADLEGKVKELEGFCTEALDELDREKVKNAKRIFAEG 1031 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig773.14.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig773.14.2 >prot_P-littoralis_Contig773.14.2 ID=prot_P-littoralis_Contig773.14.2|Name=mRNA_P-littoralis_Contig773.14.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1087bp MPNLAFSPGPQQPSGEKENASSTPPKSSNGGGINKKIAGELFAAGGRSSTback to top mRNA from alignment at P-littoralis_Contig773:63744..84705- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig773.14.2 ID=mRNA_P-littoralis_Contig773.14.2|Name=mRNA_P-littoralis_Contig773.14.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=20962bp|location=Sequence derived from alignment at P-littoralis_Contig773:63744..84705- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig773:63744..84705- >mRNA_P-littoralis_Contig773.14.2 ID=mRNA_P-littoralis_Contig773.14.2|Name=mRNA_P-littoralis_Contig773.14.2|organism=Pylaiella littoralis U1_48|type=CDS|length=3261bp|location=Sequence derived from alignment at P-littoralis_Contig773:63744..84705- (Pylaiella littoralis U1_48)back to top |