mRNA_P-littoralis_Contig772.34.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig772.34.1
Unique NamemRNA_P-littoralis_Contig772.34.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig772.34.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE)

HSP 1 Score: 399 bits (1026), Expect = 5.540e-136
Identity = 206/337 (61.13%), Postives = 244/337 (72.40%), Query Frame = 1
Query:    7 QILGRGNCFD-INQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTTAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQEFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRRADGTDRPFRPPLLLLCRRVPNQHWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGISVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPR----PATDPEEYLF----------NPQHAKLKGQLIESFAYRKKNNDVV*LPTPK 972
            Q+LG+GNCFD + QLS MSKSMA  TFHKFC++FA EMF+EHIYLPTGTY DEVM  + +LG+T A GSTDVTH+GW MCPFTLGRSFTGKEGFPT+A++VTVDH GR + VT  FTGATNDKTI+RYD+ V  IR    Y +REYKLR+A+GT R  R   L++        WVTL+APSKYP   +D AFS+ LESVRKDV CF        RILKLR+ YH RE +DNIFFTCCILHNMLH+FDG+ VF+EN DW GSAG HD  +H P TD+TSVG +    P  + E+             +P HA+LK QLIESFA+RKK ND+  L  PK
Sbjct:   42 QVLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGY--HEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGCF--------RILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLPPKEGEKAECGEGGHVRKERHPDHAELKRQLIESFAFRKKINDITWLSRPK 368          
BLAST of mRNA_P-littoralis_Contig772.34.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 359 bits (922), Expect = 1.310e-118
Identity = 179/321 (55.76%), Postives = 227/321 (70.72%), Query Frame = 1
Query:    4 LQILGRGNCF-DINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTTAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQEFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRRADGTDRPFRPPLLLLCRRVPNQHWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGISVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPRPAT-DPEEYLFNPQHAKLKGQLIESFAYRKKNNDVV*L 960
            LQIL RGNCF DI  +S +S   AAATFH+F + FA+EM+ EHI+LPTG YQ +VM  Y +LGF+ A GSTDVTH+ WGMCP+   RS+TGKEG+PT+A++VTVDH  R + VT  FTG+TNDK+I+RYD AV  IR + +Y ++E+ +  ADGT    +   LL+        WVTL+ PSKYP D +D AFSK LESVRKDVECFFGI+KGRFRILKL + YH +EDIDN+FFTCCILHNMLHS+D  S  +E  +WAG+AGLH+  +H P  D +SVG + ++   E+          + QLI SF YRK  ND+  L
Sbjct:  163 LQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGY--HKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKSKNDIAWL 481          
BLAST of mRNA_P-littoralis_Contig772.34.1 vs. uniprot
Match: A0A6H5KEB6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB6_9PHAE)

HSP 1 Score: 358 bits (918), Expect = 4.690e-116
Identity = 201/390 (51.54%), Postives = 236/390 (60.51%), Query Frame = 1
Query:   85 HKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTTAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQEFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRRADGTDRPFRPPLLL----------LC--------RRVPNQH-----WVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYH-------------------------------------C--------------------REDIDNIFFTCCILHNMLHSFDGISVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPR----PATDPEEYLF----------NPQHAKLKGQLIESFAYRKKNNDVV*LPTPK 972
            HKFC++FA EMF+EHIYL TGTY DEVM  + +LG T A GST+VTH+GW MCPFTLGRSFTGKEGFPT+A EVTVDHAGRA+ VT  FTGATNDKTI+RYD+ V  IR    Y +REYKLR+A+GT+R  R   L+          LC         ++P+       WVTL+APSKYP   +D AFS+ LESVRKDVECFFGILKGRFRILKLR+ YH                                     C                    RE IDNIFFTCCILHNMLH+FDG+ VF+EN DW GSAG HD  +H P TD+TSVG +    P  + EE             +P HA+ K  LIESFA+RKK ND++ L  PK
Sbjct:  246 HKFCRHFAAEMFDEHIYLLTGTYLDEVMGIFHQLGCTGACGSTNVTHIGWNMCPFTLGRSFTGKEGFPTIACEVTVDHAGRALAVTNGFTGATNDKTIIRYDSGVNKIRTESQYTEREYKLRKANGTERTRRGCFLIVDNGMSVPKDLCVVHHKNIVAKLPSSERVLIWWVTLIAPSKYPQSNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTGGXFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLPPKEGEEEECGEGGHVRKERHPYHAESKRHLIESFAFRKKINDIIWLSRPK 635          
BLAST of mRNA_P-littoralis_Contig772.34.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 327 bits (839), Expect = 4.150e-107
Identity = 170/321 (52.96%), Postives = 216/321 (67.29%), Query Frame = 1
Query:    4 LQILGRGNCF-DINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTTAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQEFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRRADGTDRPFRPPLLLLCRRVPNQHWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGISVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPRPATDPEEYLFNPQHAKLKGQLIESFAYRK-KNNDVV*L 960
            LQIL RGN F DI  +S +S    A+TFH+FCK FA E+++E++YLPTG    +VM+ Y ++GF  A+GSTDVTH+ WGMCP+   R +TGKEG PT+AF+VTVDH+GR + VT+ FTGATNDKTI+RYD AV  IR + VY +++YKL   DG     +   LL+        W TL+ PSK P D  D  FSK LES RKDVEC+FGILKGRFRI KL + +H +E IDN+FFTCCILHNMLHSFD      E  +WAGSAGLH+  D  P+TD++SVG       E          L+ +L+ +F YR+ K  D+V L
Sbjct:   88 LQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGY--HKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVGSMDGQH-EAVEVETGFGALRSKLVTNFVYRREKKRDIVWL 405          
BLAST of mRNA_P-littoralis_Contig772.34.1 vs. uniprot
Match: A0A6H5K872_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K872_9PHAE)

HSP 1 Score: 327 bits (839), Expect = 5.870e-107
Identity = 175/321 (54.52%), Postives = 208/321 (64.80%), Query Frame = 1
Query:    4 LQILGRGNCFD-INQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTTAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQEFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRRADGTDRPFRPPLLLLCRRVPNQHWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGISVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPR----PATDPEEY---------LFNPQHAKLKGQLIESF 924
            L +LG+GNCFD + QLS MS SMA ATFHKFC++FA EMF+EHI+ PT TY DE M  + +LG T A  STDVTH+   MCPFTLGRSFTGKEGFPT+A+EVTVDHA RA+ VT  FTGA NDKT++ YD+ V  IR    Y +R+YKLR+A+GT+R  R                                FS +     +DVECFFGILKGRFRILKLR+ YH RE IDNIFFTCCI HNMLH+FDG+ +F+EN DW GSAG HD  +  P  D+TSVG +    P  D E+               HA+LK QLIESF
Sbjct:  102 LTVLGKGNCFDDVEQLSKMSISMAQATFHKFCRHFAAEMFDEHIFSPTETYLDEFMGIFHQLGCTGACRSTDVTHIDCNMCPFTLGRSFTGKEGFPTIAYEVTVDHASRALAVTNGFTGAMNDKTVIWYDSGVNDIRTESQYTERQYKLRKANGTERTRR------------------------------GCFSIVDNGYHEDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCIRHNMLHTFDGLDLFEENTDWTGSAGHHDAWERDPLMDYTSVGSKGVLLPPKDGEKEERGEGGHVRKERQDHAELKKQLIESF 392          
BLAST of mRNA_P-littoralis_Contig772.34.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 327 bits (839), Expect = 6.770e-106
Identity = 170/321 (52.96%), Postives = 216/321 (67.29%), Query Frame = 1
Query:    4 LQILGRGNCF-DINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTTAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQEFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRRADGTDRPFRPPLLLLCRRVPNQHWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGISVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPRPATDPEEYLFNPQHAKLKGQLIESFAYRK-KNNDVV*L 960
            LQIL RGN F DI  +S +S    A+TFH+FCK FA E+++E++YLPTG    +VM+ Y ++GF  A+GSTDVTH+ WGMCP+   R +TGKEG PT+AF+VTVDH+GR + VT+ FTGATNDKTI+RYD AV  IR + VY +++YKL   DG     +   LL+        W TL+ PSK P D  D  FSK LES RKDVEC+FGILKGRFRI KL + +H +E IDN+FFTCCILHNMLHSFD      E  +WAGSAGLH+  D  P+TD++SVG       E          L+ +L+ +F YR+ K  D+V L
Sbjct:  179 LQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGY--HKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVGSMDGQH-EAVEVETGFGALRSKLVTNFVYRREKKRDIVWL 496          
BLAST of mRNA_P-littoralis_Contig772.34.1 vs. uniprot
Match: A0A6H5JQM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM6_9PHAE)

HSP 1 Score: 317 bits (812), Expect = 3.680e-105
Identity = 163/259 (62.93%), Postives = 186/259 (71.81%), Query Frame = 1
Query:  238 MCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQEFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRRADGTDRPFRPPLLLLCRRVPNQHWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGISVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPR-----PATDPEEYLF---------NPQHAKLKGQLIESFAYRKKNNDVV*LPTPK 972
            MCPFTLGRSFTGKEGFPT+A+EVTVDH GRA+ VT  FTGATNDKTI+RYD+ V  IR    Y +REYKLR+ +GT+R  R   L++        WVTL+APSKYP    D AFS+ LESVRKDVECFFGILKGRFRILKLR+ YH RE IDNIFFTCCILHNMLH+FDG+ VF EN DW GSAG HD  +H P TD+TSVG +     P    EE            +P HA+LK QLIESFA+RKK ND+  L  PK
Sbjct:    1 MCPFTLGRSFTGKEGFPTIAYEVTVDHVGRALAVTNGFTGATNDKTIIRYDSGVNNIRTESQYTEREYKLRKVNGTERTRRGCFLIMDNWY--HEWVTLIAPSKYPQSNKDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDVFDENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLLPKEGEEEECGEGGHVRKERHPDHAELKRQLIESFAFRKKINDITWLSRPK 257          
BLAST of mRNA_P-littoralis_Contig772.34.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE)

HSP 1 Score: 313 bits (801), Expect = 7.060e-102
Identity = 157/246 (63.82%), Postives = 185/246 (75.20%), Query Frame = 1
Query:    4 LQILGRGNCFD-INQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTTAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQEFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRRADGTDRPFRPPLLLLCRRVPNQHWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHS 738
            L++LG+GNCFD + QLS MS+S+A A FHKFC++ A EMF+EHIYLPTGTY DEVM  + +LG T A GSTDVTH+G  MCPFTLGRSFTGKEGFPT+A+EVTVDHAGRA+ VT  F G TNDKT +RYD+ V  IR    Y +REYKLR+ +GT+R  R   L++               + Y    +D AFS+ LESVRKDVECFFGILKGRFRILKLR+ YH RE IDNIFFTCCILHNMLH+
Sbjct:  137 LKVLGKGNCFDDVEQLSKMSESIAQALFHKFCRHSAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGFAGGTNDKTTIRYDSGVNKIRTESQYTEREYKLRKVNGTERTRRGCFLIV--------------DNGYYESNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHT 368          
BLAST of mRNA_P-littoralis_Contig772.34.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 303 bits (776), Expect = 3.570e-97
Identity = 170/351 (48.43%), Postives = 211/351 (60.11%), Query Frame = 1
Query:    4 LQILGRGNCF-DINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPT--GTYQDEVMDCYRKLGFTTAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQEFTGATNDKTIVRYDAAVQTIRNNKVYK----------------------------DREYKLRRADGTDRPFRPPLLLLCRRVPNQHWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGISVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPRPATDPEEYLFNPQHAKLKGQLIESFAYRKKNN-DVV*L 960
            L ILGRGNCF  I Q+S MS       FHKFC++FA+EM++E I+LPT      D VM  Y +LGFT A+GS DVTH+ W  CP+   RS+TGKEGFPT+A++VTVDHAGRAI VT+ FTG+TNDKTIV +D AV+ I  +K Y                             ++ + +   DGT    +   LL+        W  L+ PSKYP   +D  FSK LESVRKDVECFFGILKGRFRILKL + Y  +E IDN+FFTC ILHNMLH+FDG+    EN +W  SAG+       P+ D  SVG +   D  +     +H   K QL  SFAYRKK+  D+V L
Sbjct:   90 LTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGY--HKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTNWVSSAGVGATLTTEPEADCGSVGTKDVNDQPQLEI--EHTVRKRQLTTSFAYRKKHKKDIVWL 436          
BLAST of mRNA_P-littoralis_Contig772.34.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 301 bits (772), Expect = 2.370e-96
Identity = 162/323 (50.15%), Postives = 210/323 (65.02%), Query Frame = 1
Query:    4 LQILGRGNCF-DINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPT--GTYQDEVMDCYRKLGFTTAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQEFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRRADGTDRPFRPPLLLLCRRVPNQHWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGISVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPRPATDPEEYLFNPQHAKLKGQLIESFAYRKKNN-DVV*L 960
            L ILGRGN F  I  LS MS       FH+FC++FA EM++EHI+LP+      D VM  Y KLGF  A+GSTDVTH+GW  CP+  GRS+TGKEG PT+ ++VTV+HAGR + VT+ FTG+TNDKTI+  D AV  IR +K Y ++ + + + DGT    +   L++        W  L+ PSKYP    D  FSK LESVRKDVECFFGILK RFRILKL + Y  +E +D +FFTCCILHNMLH+ DG+   +E+V+W GSA L +   H  + D +SVG +   D  +      HA+LK +L  +F YRKK+  D+V L
Sbjct:  132 LTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGY--HKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQNTSGH--NLDSSSVGTKDLNDKPQV--EAAHAELKRKLTTNFLYRKKHKKDIVWL 448          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig772.34.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K796_9PHAE5.540e-13661.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JAU4_9PHAE1.310e-11855.76Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEB6_9PHAE4.690e-11651.54DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KY50_9PHAE4.150e-10752.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K872_9PHAE5.870e-10754.52DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5JPH7_9PHAE6.770e-10652.96Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQM6_9PHAE3.680e-10562.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSI7_9PHAE7.060e-10263.82DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5KNX4_9PHAE3.570e-9748.43DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JBE2_9PHAE2.370e-9650.15Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig772contigP-littoralis_Contig772:126882..128437 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FSK2
PFAMsPlant_tran
Model size993
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue4.24e-89
EggNOG OGs2E2RF@1|root,2S9YA@2759|Eukaryota
DescriptionPlant transposon protein
Cds size903
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791595.0270238-UTR-P-littoralis_Contig772:126881..1269351680791595.0270238-UTR-P-littoralis_Contig772:126881..126935Pylaiella littoralis U1_48UTRP-littoralis_Contig772 126882..126935 +
1680791595.06068-UTR-P-littoralis_Contig772:128401..1284371680791595.06068-UTR-P-littoralis_Contig772:128401..128437Pylaiella littoralis U1_48UTRP-littoralis_Contig772 128402..128437 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791595.0384676-CDS-P-littoralis_Contig772:126935..1273481680791595.0384676-CDS-P-littoralis_Contig772:126935..127348Pylaiella littoralis U1_48CDSP-littoralis_Contig772 126936..127348 +
1680791595.049411-CDS-P-littoralis_Contig772:127911..1284011680791595.049411-CDS-P-littoralis_Contig772:127911..128401Pylaiella littoralis U1_48CDSP-littoralis_Contig772 127912..128401 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig772.34.1prot_P-littoralis_Contig772.34.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig772 126936..128401 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig772.34.1

>prot_P-littoralis_Contig772.34.1 ID=prot_P-littoralis_Contig772.34.1|Name=mRNA_P-littoralis_Contig772.34.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=301bp
MSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTTAI
GSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQEFT
GATNDKTIVRYDAAVQTIRNNKVYKDREYKLRRADGTDRPFRPPLLLLCR
RVPNQHWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRIL
KLRLAYHCREDIDNIFFTCCILHNMLHSFDGISVFKENVDWAGSAGLHDP
KDHAPDTDFTSVGPRPATDPEEYLFNPQHAKLKGQLIESFAYRKKNNDVV
*
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mRNA from alignment at P-littoralis_Contig772:126882..128437+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig772.34.1 ID=mRNA_P-littoralis_Contig772.34.1|Name=mRNA_P-littoralis_Contig772.34.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1556bp|location=Sequence derived from alignment at P-littoralis_Contig772:126882..128437+ (Pylaiella littoralis U1_48)
GCCCTCCAGATACTCGGCAGGGGCAACTGCTTCGACATCAACCAGCTGTC GTTAATGAGCAAATCGATGGCGGCAGCAACGTTCCACAAGTTCTGCAAGA ACTTCGCGAAGGAGATGTTCGAGGAGCATATCTACCTTCCAACAGGAACG TACCAAGACGAAGTGATGGACTGCTACCGTAAACTGGGTTTTACTACAGC AATCGGTTCTACCGACGTCACTCACGTCGGCTGGGGCATGTGTCCGTTCA CCCTTGGCCGTTCTTTCACGGGCAAGGAGGGGTTTCCAACCCTGGCGTTC GAGGTTACCGTCGACCACGCGGGGCGCGCCATTGGCGTCACCCAAGAGTT CACCGGTGCGACCAACGACAAGACGATCGTCCGCTACGACGCAGCCGTAC AGACCATCAGGAACAACAAAGTGTACAAGGATCGAGAGTACAAGCTCAGG AGGGCGGATGGCACGGAGTTCACCCGGAAAGGATGCTATTTGATCGTCGA CAACGGCTATCACGAGGTGAGTGTATTGGGGGCGTGGGTAGTATAGAATA TCCGAACGTAGTGCGTGCTCCGTAACGCTTCTGGTTGATGTGAAGCCCGA AAAAAAACACGCCGGTACACCGAAAGCAGACCAATGCCATATTTGTCGGT ACTGAATGAGGATCCTTATGGCATGTCGGCCCCGTGCATCGGGCGTCGAC CTTACTTAGGCAGCGGCACACCAAGGTAAAAAACATTTTGCCGCTTCGCG TTCATTCTATTTGTATTTGTTTTTGTGCTGGATCCGTTTGGACGGTTGCG TTCACGTTCTTACATTTCGAGCATACATTACCCCATTTATAACACCAAAG GTTTAAAAAAACAAATCTGCTCAGGGGTGGTCAGATGGCAAATATTGTAC TTCGAAGTACAAAGTTGTAGGCATCTGTGTTCCACATGTCAACACGGTTC CTCGTTCCCCCGAAGAGTTTGATCGTGAAAATATGTGCGTCGGGGCCTGA GGTTTCCAGAGCCTCTCCGTAGCTCACCAGTCGTCCCTTTCGACCCCCCC TGCTGCTGTTGTGCCGTCGTGTGCCAAATCAACACTGGGTCACCCTCATG GCCCCATCGAAGTACCCGGGTGACGTGGATGACGCGGCCTTCTCCAAGAT GCTTGAGAGTGTGCGCAAGGATGTGGAGTGTTTCTTCGGCATTCTGAAAG GGCGCTTCAGAATCCTGAAGCTCCGCCTGGCCTACCACTGCAGGGAAGAC ATCGATAACATCTTCTTCACGTGCTGCATTCTCCACAACATGCTCCACTC CTTCGACGGCATTAGCGTGTTCAAGGAGAACGTCGACTGGGCAGGCAGCG CTGGTCTGCACGACCCCAAGGACCACGCCCCAGACACGGACTTCACGTCG GTCGGGCCGAGGCCGGCAACCGACCCGGAGGAGTACTTGTTCAATCCGCA ACATGCAAAGCTGAAGGGCCAGCTGATCGAGAGTTTTGCCTACCGCAAGA AAAACAATGACGTTGTCTAGCTCCCTACGCCCAAGTAGAGTTGAGGTGAT TTGGAT
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Coding sequence (CDS) from alignment at P-littoralis_Contig772:126882..128437+

>mRNA_P-littoralis_Contig772.34.1 ID=mRNA_P-littoralis_Contig772.34.1|Name=mRNA_P-littoralis_Contig772.34.1|organism=Pylaiella littoralis U1_48|type=CDS|length=903bp|location=Sequence derived from alignment at P-littoralis_Contig772:126882..128437+ (Pylaiella littoralis U1_48)
ATGAGCAAATCGATGGCGGCAGCAACGTTCCACAAGTTCTGCAAGAACTT
CGCGAAGGAGATGTTCGAGGAGCATATCTACCTTCCAACAGGAACGTACC
AAGACGAAGTGATGGACTGCTACCGTAAACTGGGTTTTACTACAGCAATC
GGTTCTACCGACGTCACTCACGTCGGCTGGGGCATGTGTCCGTTCACCCT
TGGCCGTTCTTTCACGGGCAAGGAGGGGTTTCCAACCCTGGCGTTCGAGG
TTACCGTCGACCACGCGGGGCGCGCCATTGGCGTCACCCAAGAGTTCACC
GGTGCGACCAACGACAAGACGATCGTCCGCTACGACGCAGCCGTACAGAC
CATCAGGAACAACAAAGTGTACAAGGATCGAGAGTACAAGCTCAGGAGGG
CGGATGGCACGGATCGTCCCTTTCGACCCCCCCTGCTGCTGTTGTGCCGT
CGTGTGCCAAATCAACACTGGGTCACCCTCATGGCCCCATCGAAGTACCC
GGGTGACGTGGATGACGCGGCCTTCTCCAAGATGCTTGAGAGTGTGCGCA
AGGATGTGGAGTGTTTCTTCGGCATTCTGAAAGGGCGCTTCAGAATCCTG
AAGCTCCGCCTGGCCTACCACTGCAGGGAAGACATCGATAACATCTTCTT
CACGTGCTGCATTCTCCACAACATGCTCCACTCCTTCGACGGCATTAGCG
TGTTCAAGGAGAACGTCGACTGGGCAGGCAGCGCTGGTCTGCACGACCCC
AAGGACCACGCCCCAGACACGGACTTCACGTCGGTCGGGCCGAGGCCGGC
AACCGACCCGGAGGAGTACTTGTTCAATCCGCAACATGCAAAGCTGAAGG
GCCAGCTGATCGAGAGTTTTGCCTACCGCAAGAAAAACAATGACGTTGTC
TAG
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