mRNA_P-littoralis_Contig772.24.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig772.24.1 vs. uniprot
Match: D7FN64_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN64_ECTSI) HSP 1 Score: 438 bits (1126), Expect = 4.050e-152 Identity = 217/296 (73.31%), Postives = 244/296 (82.43%), Query Frame = 1
Query: 130 MPSTWLDVLTLDLDLVGLLKESPSSLGGFISVFGTLLAFVRPTIPGDSPHMLRTLFPLAAWFLFSDEATATPTNLIDDDALESFFYVNGICTTHRMALATGAELSEMFNKNVTVVHNPTDSALMDLAECIIGKLWTGQSFATSKPSSLLLDKLLKTLKDTTIPKVVLVAHSQGTIIASDVLGRLWNAV--------AMEKLEMYNLANAAHWMDQ-RDGYPYIESLCNQRDSVAMLGANAPERVKKMWNIDIAGPVLYPSTSRWGHMISAHYLKHLKNGDYPHSKLRTYMSNTTAP 990
MP TWLDVLTLDL L LLKES SS+ FIS+FGTLLAFVRPTIPGDSP +LRTL PL AW +FSDEAT TP L+DD + ESFFYVNGICTT RMALATGAELS+MFNKNVTVVHNPTDS ++D+ EC+ KLWTGQSFATS+P +LL+D+LL+ L+D T KVVL+AHSQGTIIASD L RLW AV M+KLE+YNLANAAHWMDQ D PYIES+CNQRD+V MLGANAPE VK+ WNI IAGPV+YP+T+RWGHMISAHYLKHLKNGDYP SKL TYM+ P
Sbjct: 1 MPGTWLDVLTLDLGLDDLLKESKSSITSFISMFGTLLAFVRPTIPGDSPRVLRTLLPLVAWVVFSDEATVTPDQLVDDGSPESFFYVNGICTTRRMALATGAELSKMFNKNVTVVHNPTDSFIVDIFECVFAKLWTGQSFATSRPCALLMDRLLEALRDPTKTKVVLIAHSQGTIIASDALRRLWTAVDKGELTHDEMKKLEIYNLANAAHWMDQTEDRVPYIESICNQRDTVGMLGANAPESVKQSWNIRIAGPVVYPTTNRWGHMISAHYLKHLKNGDYPGSKLHTYMNTAKEP 296
BLAST of mRNA_P-littoralis_Contig772.24.1 vs. uniprot
Match: A0A0G4GTY4_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GTY4_VITBC) HSP 1 Score: 132 bits (331), Expect = 9.490e-32 Identity = 100/312 (32.05%), Postives = 158/312 (50.64%), Query Frame = 1
Query: 106 FLILGILGMPSTWLDVLTLDLDLVGLLKESPSSLGGFISVFGTLLAFVRPTIPGDSPHMLRTLF-PLAAWFLFSDEATATPTNLIDD-DALESFFYVNGICTTHRMALATGAELSEMFNKNVTVVHNPTDSALMDLAECIIGKL---WTGQSFATSKPSSLLLDKLLKTLKDTTIPKVVLVAHSQGTIIASDVLGRLW--------NAVAMEKLEMYNLANAAHWMDQRDGYPY---IESLCNQRDSVAMLGANAPER-----VKKMWNIDIAGPVLYPSTSRWGHMISAHYLKHLKNGDYPHSKLRTYMSN 978
+ +LGI+G P TW+ ++ L+ P + G + VF TL+ P +P D P+ R F LF + + P +D E++ YVNG+ T +A+ L E+F +++TVVHNPTDS ++DL EC+ GKL W + +P ++L + ++ D KVVL+ HSQGTII ++VL R+ + A +KLE+Y A+ AH +D + +ESLCN D+VA+LG P V + + + + GH+++ HYL++ N +Y S L Y+ N
Sbjct: 90 YAVLGIIGGPWTWMCMVKTLLE--------PGVIDGLVCVFETLV----PAVPCDPPNWCRQYFGDFITRLLFRESSMTKPVPAENDRHPDEAWIYVNGVGTGMPIAVENAKRLVELFGRSITVVHNPTDSFIVDLLECVAGKLKLMWWWKV----EPVGVVL-RTVEQAFDQGKTKVVLIGHSQGTIIVNNVLDRIARKHINSPPDLKAQKKLEVYLFADCAHHIDTASLEQHSICVESLCNSYDTVALLGGTYPRPETWRDVTEEQRVVNKRVRVVVQDGKGGHLLNTHYLENFAN-EYKGSHLHQYLVN 383
BLAST of mRNA_P-littoralis_Contig772.24.1 vs. uniprot
Match: A0A6C0AZA8_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0AZA8_9ZZZZ) HSP 1 Score: 127 bits (320), Expect = 5.830e-31 Identity = 76/225 (33.78%), Postives = 120/225 (53.33%), Query Frame = 1
Query: 316 LFSDEATATPTNLIDDDALESFFYVNGICTTHRMALATGAELSEMFNKNVTVVHNPTDSALMDLAECIIGKLWTGQSFATSKPSSLLLDKLLKTLKDTTIPKVVLVAHSQGTIIASDVLGRLWNA-----VAMEKLEMYNLANAAHWMDQ-RDGYPYIESLCNQRDSVAMLGANAPERVKKMWNIDIAGPVLYPSTSRWGHMISAHYLKHLKNGDYPHSKLRTYM 972
LF + ++ D + F Y+NGI + ++ L L + NK + ++HN T + +MDL EC+IGK ++ ++ S++ L + L D I K++++ HSQGTII + VL + + + KLE+Y AN A M ++ PY+E N D VA G N P+ ++K NID ++ S + GHM+++HYL + K DYP SKL TY
Sbjct: 76 LFGSNSKYIKNDIELDSSGNCFIYINGIMSNEKLVLINKKYLETLLNKPINIIHNITQTLVMDLIECLIGK----ETEYLTEASTICLYTITAKLLDDNINKIIIICHSQGTIIVAKVLNTIKKMGLDKDIYLSKLEIYAFANCATNMSYIKNNLPYMEHFANDNDFVAKCGCNCPQSIEKYINID---GEIFISKDKSGHMLNSHYLNNFKV-DYPTSKLNTYF 292
BLAST of mRNA_P-littoralis_Contig772.24.1 vs. uniprot
Match: A0A0M9DZM6_9DELT (Uncharacterized protein n=1 Tax=Candidatus Magnetomorum sp. HK-1 TaxID=1509431 RepID=A0A0M9DZM6_9DELT) HSP 1 Score: 128 bits (322), Expect = 7.880e-31 Identity = 85/265 (32.08%), Postives = 127/265 (47.92%), Query Frame = 1
Query: 259 IPGDSPHMLRTLFPLAAWFLFSDEATAT-PTNLIDDDAL---ESFFYVNGICTTHRMALATGAELSEMFNKNVTVVHNPTDSALMDLAECIIGKLWTGQSFATSKPSSLLLDKLLKTLKDTTIPKVVLVAHSQGTIIASDVLGRLWNAVA---------MEKLEMYNLANAAHWMDQRDGY--------PYIESLCNQRDSVAMLGANAPERVKKMWNIDIAGPVLYPSTSRWGHMISAHYLKHLKNGDYPHSKLRTYMSNTTAP 990
+P P+ P+ D T P N+ D D E++FY+NGI T ++L L+ +F++ + + NP+DS +DL EC IGK W + P+ L+ + L D I +V+L+AHSQGTIIA+++L L + + M+KLE+Y AN A M G PYIE+ N+ D VA +G +P K W+I+I G Y WGH+ ++HYL +S R+ N P
Sbjct: 67 LPIPIPYRYLNWLPIPETLFLKDTHIFTYPENMKDQDENFPNEAWFYINGIATNTDLSLMNCKYLNRLFHRRIIAIQNPSDSIFVDLLECAIGKRWK----RSMSPARKALEPVTAALNDPDIERVILIAHSQGTIIAANILRSLTDDMGTQHVTPFEQMKKLEIYAFANCADDMQYIKGMKSATGRSVPYIENFANENDIVARMGILSPR--KDFWDINIDGDC-YIRKGVWGHLFNSHYLNGFDTSRANYSPFRSTTRNGATP 324
BLAST of mRNA_P-littoralis_Contig772.24.1 vs. uniprot
Match: A0A1V1PIU6_9DELT (Uncharacterized protein n=1 Tax=Candidatus Magnetoglobus multicellularis str. Araruama TaxID=890399 RepID=A0A1V1PIU6_9DELT) HSP 1 Score: 124 bits (312), Expect = 2.080e-29 Identity = 79/223 (35.43%), Postives = 115/223 (51.57%), Query Frame = 1
Query: 373 ESFFYVNGICTTHRMALATGAELSEMFNKNVTVVHNPTDSALMDLAECIIGKLWTGQSFATSKPSSLLLDKLLKTLKDTTIPKVVLVAHSQGTIIASDVLGRLWNAVA---------MEKLEMYNLANAAHWMD------QRDGYP--YIESLCNQRDSVAMLGANAPERVKKMWNIDIAGPVLYPSTSRWGHMISAHYLKHLKNGDYPHSKLRTYMSNTTAP 990
E++F+VNGI T MA L E+F + + + NPTDS L+DL EC +GK W + P+ L + K L D I +V+L+ HSQGTII++++L L M+KLE+Y AN A M+ G+P YIE+ N+ D VA LG +P K++W+I I G +Y + WGH+++ HYL +S R+ N P
Sbjct: 107 EAWFFVNGIATNTDMAKMNCRYLHELFGRRIVGIQNPTDSILVDLLECAVGKRWK----RSMSPAQNALGPISKALNDPDIHRVILIGHSQGTIISANILRSLVEDHGQTYVQPFDNMKKLEIYAFANCADSMEYIQDIRSEIGHPVPYIENFANEHDLVARLGMLSPR--KELWDIRIDGD-MYVRKNGWGHLLNTHYLNGFDTKRSDYSPFRSLTKNGATP 322
BLAST of mRNA_P-littoralis_Contig772.24.1 vs. uniprot
Match: A0A7S1JP67_9ALVE (Hypothetical protein n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1JP67_9ALVE) HSP 1 Score: 117 bits (292), Expect = 3.520e-27 Identity = 87/272 (31.99%), Postives = 133/272 (48.90%), Query Frame = 1
Query: 196 PSSLGGFISVFGTLLAFVRPTIPGDSPHMLRTLF-PLAAWFLFSDEATATPTNLIDD-DALESFFYVNGICTTHRMALATGAELSEMFNKNVTVVHNPTDSALMDLAECIIGKL---WTGQSFATSKPSSLLLDKLLKTLKDTTIPKVVLVAHSQGTIIASDVLGRLWNAVAMEKLEMYNLANAAHWMDQRDGYPYIESLCNQRDSVAMLGANAPER-----VKKMWNIDIAGPVLYPSTSRWGHMISAHYLKHLKNGDYPHSKLRTYMSNT 981
P G + VF TL+ P +P D P+ R F W LF + +T DD E++ YVNG+ T +A+ L E+F +++TVVHNPTDS ++DL EC+ GKL W + +P ++L + ++ D KVVL+ HSQGTII ++VL R+ ++ H + +ESLCN D+VA+LG P V K + + + GH+++ HYL + N +Y S+L Y+ N+
Sbjct: 10 PGVRDGLLCVFETLV----PAVPCDPPNWCRQYFGDFITWLLFREGSTTKLVQAEDDRHPDEAWIYVNGVGTGMPIAVENAKRLVELFGRSITVVHNPTDSFIVDLLECVAGKLKLMWWWKV----EPVGVVL-RTVEQAFDQGKTKVVLIGHSQGTIIVNNVLDRIARKHINSPPDLKAQKKLEHSIR-------VESLCNSYDTVALLGGAYPRPGTWRDVTKQQRVVNKRVRVVVQDGKGGHLLNTHYLDNFAN-EYKGSRLHQYLVNS 264
BLAST of mRNA_P-littoralis_Contig772.24.1 vs. uniprot
Match: A0A0M9DRH3_9BACT (Uncharacterized protein n=1 Tax=bacterium 336/3 TaxID=1664068 RepID=A0A0M9DRH3_9BACT) HSP 1 Score: 111 bits (278), Expect = 9.200e-25 Identity = 95/304 (31.25%), Postives = 146/304 (48.03%), Query Frame = 1
Query: 118 GILGMPSTWLDV---LTLDLDLVGLLKESPSSLGGFISVFGTLLAFVRPTIPGDSPHMLRTLFPLAAWFLFSDEATATPTNLIDDDALESFFYVNGICTTHRMALATGAELSEMFNKNVTVVHNPTDSALMDLAECIIGKLW-TGQSFATSKPSSLLLDKLLKTLKDTTIPKVVLVAHSQGTIIASDVLGRLWNA--VAMEKLEMYNLANAAHWMDQR-----DGYPYIESLCNQRDSVAMLGANAPERVKKMWNIDIAGPVLYPSTSRWGHMISAHYLKHLKNGDYPH-------SKLRTYMS 975
I G P +W D +L LLK S + F F++P IP L+++ + +F D + + + I+D E +F++NGI T +A++ G +S +F + +T++HNPT+ +D+ + +GK T FA +L ++ K L + KVVL++HSQGT+I S +L L + KLE+Y AN A M + + P IES N+ D VA LG P R ++ I I G WGH ++ HYLK G+Y H SKL TY++
Sbjct: 22 SIFGEPDSWADTDKFSEFNLASADLLKFVKYSSEVALPPFFGDSQFLKPFIPS----FLQSILFMERASIF-DVSMVSKNDQIED---EKWFFINGIVTNEDLAMSNGKYISLLFQRPITILHNPTNGIGLDMIQSAMGKFGHTNVEFA-----KFVLPQIRKALSEK--EKVVLMSHSQGTLITSTILDMLIQERNPYIGKLEIYAFANCAEEMSHKPIADKNNKPLIESFSNEHDVVAKLGVLHPYREER--GIQIDGEHFIKKDG-WGHFLNIHYLKGFVKGEYIHDSGKKVTSKLFTYLN 307
BLAST of mRNA_P-littoralis_Contig772.24.1 vs. uniprot
Match: A0A7S2KLI0_9STRA (Hypothetical protein n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KLI0_9STRA) HSP 1 Score: 110 bits (275), Expect = 1.330e-23 Identity = 75/225 (33.33%), Postives = 111/225 (49.33%), Query Frame = 1
Query: 358 DDDALESFFYVNGICTTHRMALATGAELSEMFNKNVTVVHNPTDSALMDLAECIIGKLWTGQSFATSKPSSLLLDKLLKTLKDTTIPKVVLVAHSQGTIIASDVLGRLWNAVA----------------MEKLEMYNLANAAHWMDQRDGYPYIESLCNQRDSVAMLGANAPERVKKMWNIDIAGPVLYP------STSRWGHMISAHYLKHLKNGDYPHSKLRT 966
+D E + + NGI A +++EMF + ++HNPTD ++DL EC++GK + T P LL + L K +K K+VLVAHSQGTII+ +V+ + + M KLE+Y A AAH+M + ++E L N+ D VA+LG P +K +W ++Y TS WGH HYL ++ G + SKL T
Sbjct: 185 NDHPEELWIFCNGIMNDVDDAKRACKKITEMFGRPCKLLHNPTDGPILDLLECLMGKTGLFRLGCTG-PRKLLRNILDKEMKKDCYKKIVLVAHSQGTIISGNVIADFNDRIEDKEKYTVEEREVIKKNMSKLEVYIFAGAAHYMSGKY-VSHLECLSNRGDVVAVLGHIFPNILKSIWRNTRGNGIIYDHCKDHVETSNWGHSFIPHYLAPMEKGCFSGSKLAT 407
BLAST of mRNA_P-littoralis_Contig772.24.1 vs. uniprot
Match: A0A7S1JPN1_9ALVE (Hypothetical protein (Fragment) n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1JPN1_9ALVE) HSP 1 Score: 102 bits (254), Expect = 2.560e-22 Identity = 71/197 (36.04%), Postives = 105/197 (53.30%), Query Frame = 1
Query: 196 PSSLGGFISVFGTLLAFVRPTIPGDSPHMLRTLF-PLAAWFLFSDEATATPTNLIDD-DALESFFYVNGICTTHRMALATGAELSEMFNKNVTVVHNPTDSALMDLAECIIGKL---WTGQSFATSKPSSLLLDKLLKTLKDTTIPKVVLVAHSQGTIIASDVLGRLW--------NAVAMEKLEMYNLANAAHWMD 747
P G + VF TL+ P +P D P+ R F W LF + +T DD E++ YVNG+ T +A+ L E+F +++TVVHNPTDS ++DL EC+ GKL W + +P ++L + ++ D KVVL+ HSQGTII ++VL R+ + A +KLE+Y A+ AH +D
Sbjct: 10 PGVRDGLLCVFETLV----PAVPCDPPNWCRQYFGDFITWLLFREGSTTKLVQAEDDRHPDEAWIYVNGVGTGMPIAVENAKRLVELFGRSITVVHNPTDSFIVDLLECVAGKLKLMWWWKV----EPVGVVL-RTVEQAFDQGKTKVVLIGHSQGTIIVNNVLDRIARKHINSPPDLKAQKKLEVYLFADCAHHID 197
BLAST of mRNA_P-littoralis_Contig772.24.1 vs. uniprot
Match: A0A0G4EAN0_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EAN0_VITBC) HSP 1 Score: 102 bits (255), Expect = 5.130e-21 Identity = 86/285 (30.18%), Postives = 137/285 (48.07%), Query Frame = 1
Query: 259 IPGDSPHMLRTLFPLAAWFLFSDEATATPTNLIDDDALESFFYVNGICTTHRMALATGAELSEMFNKN-VTVVHNPTDSALMDLAECIIGKL-----WTGQSFATSKPSSLLLDKLLKT----------LKDTTIPKVVLVAHSQGTIIASDVLGRLWNAVA---------------MEKLEMYNLANAAHWMDQ---RDGYPYIESLCNQRDSVAMLGANAPERVKKMWNIDIAG---------PVLYPSTSRWGHMISAHYLKHLKNGDYPHSKLRTYMSNTT 984
+PG R + W F D ++ P + E++ YVNGIC+ +A G L E+F K +TV+HNPTDS +D+ E +GKL W + T + + + + LLK+ T +VVL+AHSQGTIIA++V+ ++ ++VA + KLE+Y A+ AH +D + ++ES+CN+RD A VK W+ D+ G P++ P + GH ++ HYL + + +Y S+L Y + T
Sbjct: 118 LPGLPFRPFRWMPRCLTWLAFRDSSSPNPLDGAPGFEKETWIYVNGICSNGWIAELNGKRLQELFCKRPITVIHNPTDSVWVDVLETFVGKLKLFSWWQVEPEKTLRKA--VEEALLKSGDXXXXXXXXXXXTGKIRVVLIAHSQGTIIANNVVHQIADSVANAKANDEKMKKMKKGLSKLEVYLFADCAHHVDVDLLKSLNVHMESICNERDP-------ALYPVKGQWS-DVNGKVVNDRPKHPIVQPD--KRGHFLNTHYLDNFRR-EYRDSRLHNYETLPT 389 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig772.24.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig772.24.1 >prot_P-littoralis_Contig772.24.1 ID=prot_P-littoralis_Contig772.24.1|Name=mRNA_P-littoralis_Contig772.24.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=333bp MQRLFEPPSPDRPPSLLNAACCSVVPLLLIVWNQTFLILGILGMPSTWLDback to top mRNA from alignment at P-littoralis_Contig772:103396..108530+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig772.24.1 ID=mRNA_P-littoralis_Contig772.24.1|Name=mRNA_P-littoralis_Contig772.24.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5135bp|location=Sequence derived from alignment at P-littoralis_Contig772:103396..108530+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig772:103396..108530+ >mRNA_P-littoralis_Contig772.24.1 ID=mRNA_P-littoralis_Contig772.24.1|Name=mRNA_P-littoralis_Contig772.24.1|organism=Pylaiella littoralis U1_48|type=CDS|length=999bp|location=Sequence derived from alignment at P-littoralis_Contig772:103396..108530+ (Pylaiella littoralis U1_48)back to top |