mRNA_P-littoralis_Contig772.24.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig772.24.1
Unique NamemRNA_P-littoralis_Contig772.24.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig772.24.1 vs. uniprot
Match: D7FN64_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN64_ECTSI)

HSP 1 Score: 438 bits (1126), Expect = 4.050e-152
Identity = 217/296 (73.31%), Postives = 244/296 (82.43%), Query Frame = 1
Query:  130 MPSTWLDVLTLDLDLVGLLKESPSSLGGFISVFGTLLAFVRPTIPGDSPHMLRTLFPLAAWFLFSDEATATPTNLIDDDALESFFYVNGICTTHRMALATGAELSEMFNKNVTVVHNPTDSALMDLAECIIGKLWTGQSFATSKPSSLLLDKLLKTLKDTTIPKVVLVAHSQGTIIASDVLGRLWNAV--------AMEKLEMYNLANAAHWMDQ-RDGYPYIESLCNQRDSVAMLGANAPERVKKMWNIDIAGPVLYPSTSRWGHMISAHYLKHLKNGDYPHSKLRTYMSNTTAP 990
            MP TWLDVLTLDL L  LLKES SS+  FIS+FGTLLAFVRPTIPGDSP +LRTL PL AW +FSDEAT TP  L+DD + ESFFYVNGICTT RMALATGAELS+MFNKNVTVVHNPTDS ++D+ EC+  KLWTGQSFATS+P +LL+D+LL+ L+D T  KVVL+AHSQGTIIASD L RLW AV         M+KLE+YNLANAAHWMDQ  D  PYIES+CNQRD+V MLGANAPE VK+ WNI IAGPV+YP+T+RWGHMISAHYLKHLKNGDYP SKL TYM+    P
Sbjct:    1 MPGTWLDVLTLDLGLDDLLKESKSSITSFISMFGTLLAFVRPTIPGDSPRVLRTLLPLVAWVVFSDEATVTPDQLVDDGSPESFFYVNGICTTRRMALATGAELSKMFNKNVTVVHNPTDSFIVDIFECVFAKLWTGQSFATSRPCALLMDRLLEALRDPTKTKVVLIAHSQGTIIASDALRRLWTAVDKGELTHDEMKKLEIYNLANAAHWMDQTEDRVPYIESICNQRDTVGMLGANAPESVKQSWNIRIAGPVVYPTTNRWGHMISAHYLKHLKNGDYPGSKLHTYMNTAKEP 296          
BLAST of mRNA_P-littoralis_Contig772.24.1 vs. uniprot
Match: A0A0G4GTY4_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GTY4_VITBC)

HSP 1 Score: 132 bits (331), Expect = 9.490e-32
Identity = 100/312 (32.05%), Postives = 158/312 (50.64%), Query Frame = 1
Query:  106 FLILGILGMPSTWLDVLTLDLDLVGLLKESPSSLGGFISVFGTLLAFVRPTIPGDSPHMLRTLF-PLAAWFLFSDEATATPTNLIDD-DALESFFYVNGICTTHRMALATGAELSEMFNKNVTVVHNPTDSALMDLAECIIGKL---WTGQSFATSKPSSLLLDKLLKTLKDTTIPKVVLVAHSQGTIIASDVLGRLW--------NAVAMEKLEMYNLANAAHWMDQRDGYPY---IESLCNQRDSVAMLGANAPER-----VKKMWNIDIAGPVLYPSTSRWGHMISAHYLKHLKNGDYPHSKLRTYMSN 978
            + +LGI+G P TW+ ++   L+        P  + G + VF TL+    P +P D P+  R  F       LF + +   P    +D    E++ YVNG+ T   +A+     L E+F +++TVVHNPTDS ++DL EC+ GKL   W  +     +P  ++L + ++   D    KVVL+ HSQGTII ++VL R+         +  A +KLE+Y  A+ AH +D      +   +ESLCN  D+VA+LG   P       V +   +      +     + GH+++ HYL++  N +Y  S L  Y+ N
Sbjct:   90 YAVLGIIGGPWTWMCMVKTLLE--------PGVIDGLVCVFETLV----PAVPCDPPNWCRQYFGDFITRLLFRESSMTKPVPAENDRHPDEAWIYVNGVGTGMPIAVENAKRLVELFGRSITVVHNPTDSFIVDLLECVAGKLKLMWWWKV----EPVGVVL-RTVEQAFDQGKTKVVLIGHSQGTIIVNNVLDRIARKHINSPPDLKAQKKLEVYLFADCAHHIDTASLEQHSICVESLCNSYDTVALLGGTYPRPETWRDVTEEQRVVNKRVRVVVQDGKGGHLLNTHYLENFAN-EYKGSHLHQYLVN 383          
BLAST of mRNA_P-littoralis_Contig772.24.1 vs. uniprot
Match: A0A6C0AZA8_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0AZA8_9ZZZZ)

HSP 1 Score: 127 bits (320), Expect = 5.830e-31
Identity = 76/225 (33.78%), Postives = 120/225 (53.33%), Query Frame = 1
Query:  316 LFSDEATATPTNLIDDDALESFFYVNGICTTHRMALATGAELSEMFNKNVTVVHNPTDSALMDLAECIIGKLWTGQSFATSKPSSLLLDKLLKTLKDTTIPKVVLVAHSQGTIIASDVLGRLWNA-----VAMEKLEMYNLANAAHWMDQ-RDGYPYIESLCNQRDSVAMLGANAPERVKKMWNIDIAGPVLYPSTSRWGHMISAHYLKHLKNGDYPHSKLRTYM 972
            LF   +     ++  D +   F Y+NGI +  ++ L     L  + NK + ++HN T + +MDL EC+IGK    ++   ++ S++ L  +   L D  I K++++ HSQGTII + VL  +        + + KLE+Y  AN A  M   ++  PY+E   N  D VA  G N P+ ++K  NID     ++ S  + GHM+++HYL + K  DYP SKL TY 
Sbjct:   76 LFGSNSKYIKNDIELDSSGNCFIYINGIMSNEKLVLINKKYLETLLNKPINIIHNITQTLVMDLIECLIGK----ETEYLTEASTICLYTITAKLLDDNINKIIIICHSQGTIIVAKVLNTIKKMGLDKDIYLSKLEIYAFANCATNMSYIKNNLPYMEHFANDNDFVAKCGCNCPQSIEKYINID---GEIFISKDKSGHMLNSHYLNNFKV-DYPTSKLNTYF 292          
BLAST of mRNA_P-littoralis_Contig772.24.1 vs. uniprot
Match: A0A0M9DZM6_9DELT (Uncharacterized protein n=1 Tax=Candidatus Magnetomorum sp. HK-1 TaxID=1509431 RepID=A0A0M9DZM6_9DELT)

HSP 1 Score: 128 bits (322), Expect = 7.880e-31
Identity = 85/265 (32.08%), Postives = 127/265 (47.92%), Query Frame = 1
Query:  259 IPGDSPHMLRTLFPLAAWFLFSDEATAT-PTNLIDDDAL---ESFFYVNGICTTHRMALATGAELSEMFNKNVTVVHNPTDSALMDLAECIIGKLWTGQSFATSKPSSLLLDKLLKTLKDTTIPKVVLVAHSQGTIIASDVLGRLWNAVA---------MEKLEMYNLANAAHWMDQRDGY--------PYIESLCNQRDSVAMLGANAPERVKKMWNIDIAGPVLYPSTSRWGHMISAHYLKHLKNGDYPHSKLRTYMSNTTAP 990
            +P   P+      P+       D    T P N+ D D     E++FY+NGI T   ++L     L+ +F++ +  + NP+DS  +DL EC IGK W      +  P+   L+ +   L D  I +V+L+AHSQGTIIA+++L  L + +          M+KLE+Y  AN A  M    G         PYIE+  N+ D VA +G  +P   K  W+I+I G   Y     WGH+ ++HYL         +S  R+   N   P
Sbjct:   67 LPIPIPYRYLNWLPIPETLFLKDTHIFTYPENMKDQDENFPNEAWFYINGIATNTDLSLMNCKYLNRLFHRRIIAIQNPSDSIFVDLLECAIGKRWK----RSMSPARKALEPVTAALNDPDIERVILIAHSQGTIIAANILRSLTDDMGTQHVTPFEQMKKLEIYAFANCADDMQYIKGMKSATGRSVPYIENFANENDIVARMGILSPR--KDFWDINIDGDC-YIRKGVWGHLFNSHYLNGFDTSRANYSPFRSTTRNGATP 324          
BLAST of mRNA_P-littoralis_Contig772.24.1 vs. uniprot
Match: A0A1V1PIU6_9DELT (Uncharacterized protein n=1 Tax=Candidatus Magnetoglobus multicellularis str. Araruama TaxID=890399 RepID=A0A1V1PIU6_9DELT)

HSP 1 Score: 124 bits (312), Expect = 2.080e-29
Identity = 79/223 (35.43%), Postives = 115/223 (51.57%), Query Frame = 1
Query:  373 ESFFYVNGICTTHRMALATGAELSEMFNKNVTVVHNPTDSALMDLAECIIGKLWTGQSFATSKPSSLLLDKLLKTLKDTTIPKVVLVAHSQGTIIASDVLGRLWNAVA---------MEKLEMYNLANAAHWMD------QRDGYP--YIESLCNQRDSVAMLGANAPERVKKMWNIDIAGPVLYPSTSRWGHMISAHYLKHLKNGDYPHSKLRTYMSNTTAP 990
            E++F+VNGI T   MA      L E+F + +  + NPTDS L+DL EC +GK W      +  P+   L  + K L D  I +V+L+ HSQGTII++++L  L              M+KLE+Y  AN A  M+         G+P  YIE+  N+ D VA LG  +P   K++W+I I G  +Y   + WGH+++ HYL         +S  R+   N   P
Sbjct:  107 EAWFFVNGIATNTDMAKMNCRYLHELFGRRIVGIQNPTDSILVDLLECAVGKRWK----RSMSPAQNALGPISKALNDPDIHRVILIGHSQGTIISANILRSLVEDHGQTYVQPFDNMKKLEIYAFANCADSMEYIQDIRSEIGHPVPYIENFANEHDLVARLGMLSPR--KELWDIRIDGD-MYVRKNGWGHLLNTHYLNGFDTKRSDYSPFRSLTKNGATP 322          
BLAST of mRNA_P-littoralis_Contig772.24.1 vs. uniprot
Match: A0A7S1JP67_9ALVE (Hypothetical protein n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1JP67_9ALVE)

HSP 1 Score: 117 bits (292), Expect = 3.520e-27
Identity = 87/272 (31.99%), Postives = 133/272 (48.90%), Query Frame = 1
Query:  196 PSSLGGFISVFGTLLAFVRPTIPGDSPHMLRTLF-PLAAWFLFSDEATATPTNLIDD-DALESFFYVNGICTTHRMALATGAELSEMFNKNVTVVHNPTDSALMDLAECIIGKL---WTGQSFATSKPSSLLLDKLLKTLKDTTIPKVVLVAHSQGTIIASDVLGRLWNAVAMEKLEMYNLANAAHWMDQRDGYPYIESLCNQRDSVAMLGANAPER-----VKKMWNIDIAGPVLYPSTSRWGHMISAHYLKHLKNGDYPHSKLRTYMSNT 981
            P    G + VF TL+    P +P D P+  R  F     W LF + +T       DD    E++ YVNG+ T   +A+     L E+F +++TVVHNPTDS ++DL EC+ GKL   W  +     +P  ++L + ++   D    KVVL+ HSQGTII ++VL R+         ++       H +        +ESLCN  D+VA+LG   P       V K   +      +     + GH+++ HYL +  N +Y  S+L  Y+ N+
Sbjct:   10 PGVRDGLLCVFETLV----PAVPCDPPNWCRQYFGDFITWLLFREGSTTKLVQAEDDRHPDEAWIYVNGVGTGMPIAVENAKRLVELFGRSITVVHNPTDSFIVDLLECVAGKLKLMWWWKV----EPVGVVL-RTVEQAFDQGKTKVVLIGHSQGTIIVNNVLDRIARKHINSPPDLKAQKKLEHSIR-------VESLCNSYDTVALLGGAYPRPGTWRDVTKQQRVVNKRVRVVVQDGKGGHLLNTHYLDNFAN-EYKGSRLHQYLVNS 264          
BLAST of mRNA_P-littoralis_Contig772.24.1 vs. uniprot
Match: A0A0M9DRH3_9BACT (Uncharacterized protein n=1 Tax=bacterium 336/3 TaxID=1664068 RepID=A0A0M9DRH3_9BACT)

HSP 1 Score: 111 bits (278), Expect = 9.200e-25
Identity = 95/304 (31.25%), Postives = 146/304 (48.03%), Query Frame = 1
Query:  118 GILGMPSTWLDV---LTLDLDLVGLLKESPSSLGGFISVFGTLLAFVRPTIPGDSPHMLRTLFPLAAWFLFSDEATATPTNLIDDDALESFFYVNGICTTHRMALATGAELSEMFNKNVTVVHNPTDSALMDLAECIIGKLW-TGQSFATSKPSSLLLDKLLKTLKDTTIPKVVLVAHSQGTIIASDVLGRLWNA--VAMEKLEMYNLANAAHWMDQR-----DGYPYIESLCNQRDSVAMLGANAPERVKKMWNIDIAGPVLYPSTSRWGHMISAHYLKHLKNGDYPH-------SKLRTYMS 975
             I G P +W D       +L    LLK    S    +  F     F++P IP      L+++  +    +F D +  +  + I+D   E +F++NGI T   +A++ G  +S +F + +T++HNPT+   +D+ +  +GK   T   FA       +L ++ K L +    KVVL++HSQGT+I S +L  L       + KLE+Y  AN A  M  +     +  P IES  N+ D VA LG   P R ++   I I G         WGH ++ HYLK    G+Y H       SKL TY++
Sbjct:   22 SIFGEPDSWADTDKFSEFNLASADLLKFVKYSSEVALPPFFGDSQFLKPFIPS----FLQSILFMERASIF-DVSMVSKNDQIED---EKWFFINGIVTNEDLAMSNGKYISLLFQRPITILHNPTNGIGLDMIQSAMGKFGHTNVEFA-----KFVLPQIRKALSEK--EKVVLMSHSQGTLITSTILDMLIQERNPYIGKLEIYAFANCAEEMSHKPIADKNNKPLIESFSNEHDVVAKLGVLHPYREER--GIQIDGEHFIKKDG-WGHFLNIHYLKGFVKGEYIHDSGKKVTSKLFTYLN 307          
BLAST of mRNA_P-littoralis_Contig772.24.1 vs. uniprot
Match: A0A7S2KLI0_9STRA (Hypothetical protein n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KLI0_9STRA)

HSP 1 Score: 110 bits (275), Expect = 1.330e-23
Identity = 75/225 (33.33%), Postives = 111/225 (49.33%), Query Frame = 1
Query:  358 DDDALESFFYVNGICTTHRMALATGAELSEMFNKNVTVVHNPTDSALMDLAECIIGKLWTGQSFATSKPSSLLLDKLLKTLKDTTIPKVVLVAHSQGTIIASDVLGRLWNAVA----------------MEKLEMYNLANAAHWMDQRDGYPYIESLCNQRDSVAMLGANAPERVKKMWNIDIAGPVLYP------STSRWGHMISAHYLKHLKNGDYPHSKLRT 966
            +D   E + + NGI      A     +++EMF +   ++HNPTD  ++DL EC++GK    +   T  P  LL + L K +K     K+VLVAHSQGTII+ +V+    + +                 M KLE+Y  A AAH+M  +    ++E L N+ D VA+LG   P  +K +W       ++Y        TS WGH    HYL  ++ G +  SKL T
Sbjct:  185 NDHPEELWIFCNGIMNDVDDAKRACKKITEMFGRPCKLLHNPTDGPILDLLECLMGKTGLFRLGCTG-PRKLLRNILDKEMKKDCYKKIVLVAHSQGTIISGNVIADFNDRIEDKEKYTVEEREVIKKNMSKLEVYIFAGAAHYMSGKY-VSHLECLSNRGDVVAVLGHIFPNILKSIWRNTRGNGIIYDHCKDHVETSNWGHSFIPHYLAPMEKGCFSGSKLAT 407          
BLAST of mRNA_P-littoralis_Contig772.24.1 vs. uniprot
Match: A0A7S1JPN1_9ALVE (Hypothetical protein (Fragment) n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1JPN1_9ALVE)

HSP 1 Score: 102 bits (254), Expect = 2.560e-22
Identity = 71/197 (36.04%), Postives = 105/197 (53.30%), Query Frame = 1
Query:  196 PSSLGGFISVFGTLLAFVRPTIPGDSPHMLRTLF-PLAAWFLFSDEATATPTNLIDD-DALESFFYVNGICTTHRMALATGAELSEMFNKNVTVVHNPTDSALMDLAECIIGKL---WTGQSFATSKPSSLLLDKLLKTLKDTTIPKVVLVAHSQGTIIASDVLGRLW--------NAVAMEKLEMYNLANAAHWMD 747
            P    G + VF TL+    P +P D P+  R  F     W LF + +T       DD    E++ YVNG+ T   +A+     L E+F +++TVVHNPTDS ++DL EC+ GKL   W  +     +P  ++L + ++   D    KVVL+ HSQGTII ++VL R+         +  A +KLE+Y  A+ AH +D
Sbjct:   10 PGVRDGLLCVFETLV----PAVPCDPPNWCRQYFGDFITWLLFREGSTTKLVQAEDDRHPDEAWIYVNGVGTGMPIAVENAKRLVELFGRSITVVHNPTDSFIVDLLECVAGKLKLMWWWKV----EPVGVVL-RTVEQAFDQGKTKVVLIGHSQGTIIVNNVLDRIARKHINSPPDLKAQKKLEVYLFADCAHHID 197          
BLAST of mRNA_P-littoralis_Contig772.24.1 vs. uniprot
Match: A0A0G4EAN0_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EAN0_VITBC)

HSP 1 Score: 102 bits (255), Expect = 5.130e-21
Identity = 86/285 (30.18%), Postives = 137/285 (48.07%), Query Frame = 1
Query:  259 IPGDSPHMLRTLFPLAAWFLFSDEATATPTNLIDDDALESFFYVNGICTTHRMALATGAELSEMFNKN-VTVVHNPTDSALMDLAECIIGKL-----WTGQSFATSKPSSLLLDKLLKT----------LKDTTIPKVVLVAHSQGTIIASDVLGRLWNAVA---------------MEKLEMYNLANAAHWMDQ---RDGYPYIESLCNQRDSVAMLGANAPERVKKMWNIDIAG---------PVLYPSTSRWGHMISAHYLKHLKNGDYPHSKLRTYMSNTT 984
            +PG      R +     W  F D ++  P +       E++ YVNGIC+   +A   G  L E+F K  +TV+HNPTDS  +D+ E  +GKL     W  +   T + +  + + LLK+             T   +VVL+AHSQGTIIA++V+ ++ ++VA               + KLE+Y  A+ AH +D    +    ++ES+CN+RD        A   VK  W+ D+ G         P++ P   + GH ++ HYL + +  +Y  S+L  Y +  T
Sbjct:  118 LPGLPFRPFRWMPRCLTWLAFRDSSSPNPLDGAPGFEKETWIYVNGICSNGWIAELNGKRLQELFCKRPITVIHNPTDSVWVDVLETFVGKLKLFSWWQVEPEKTLRKA--VEEALLKSGDXXXXXXXXXXXTGKIRVVLIAHSQGTIIANNVVHQIADSVANAKANDEKMKKMKKGLSKLEVYLFADCAHHVDVDLLKSLNVHMESICNERDP-------ALYPVKGQWS-DVNGKVVNDRPKHPIVQPD--KRGHFLNTHYLDNFRR-EYRDSRLHNYETLPT 389          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig772.24.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN64_ECTSI4.050e-15273.31Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A0G4GTY4_VITBC9.490e-3232.05Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A6C0AZA8_9ZZZZ5.830e-3133.78Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A0M9DZM6_9DELT7.880e-3132.08Uncharacterized protein n=1 Tax=Candidatus Magneto... [more]
A0A1V1PIU6_9DELT2.080e-2935.43Uncharacterized protein n=1 Tax=Candidatus Magneto... [more]
A0A7S1JP67_9ALVE3.520e-2731.99Hypothetical protein n=1 Tax=Vitrella brassicaform... [more]
A0A0M9DRH3_9BACT9.200e-2531.25Uncharacterized protein n=1 Tax=bacterium 336/3 Ta... [more]
A0A7S2KLI0_9STRA1.330e-2333.33Hypothetical protein n=2 Tax=Skeletonema marinoi T... [more]
A0A7S1JPN1_9ALVE2.560e-2236.04Hypothetical protein (Fragment) n=1 Tax=Vitrella b... [more]
A0A0G4EAN0_VITBC5.130e-2130.18Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig772contigP-littoralis_Contig772:103396..108530 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog236097.ADG881_117
PFAMsDUF900
Model size999
Max annot lvl135619|Oceanospirillales
Hectar predicted targeting categoryother localisation
Exons7
Evalue9.06e-19
EggNOG OGs2C777@1|root,33R3E@2|Bacteria,1NT4D@1224|Proteobacteria,1SM29@1236|Gammaproteobacteria,1XQ4H@135619|Oceanospirillales
Ec32 ortholog descriptionAlpha/Beta hydrolase fold
Ec32 orthologEc-06_008550.1
Cds size999
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig772.24.1prot_P-littoralis_Contig772.24.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig772 103396..108530 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791594.9163222-CDS-P-littoralis_Contig772:103395..1034561680791594.9163222-CDS-P-littoralis_Contig772:103395..103456Pylaiella littoralis U1_48CDSP-littoralis_Contig772 103396..103456 +
1680791594.9285438-CDS-P-littoralis_Contig772:103708..1037491680791594.9285438-CDS-P-littoralis_Contig772:103708..103749Pylaiella littoralis U1_48CDSP-littoralis_Contig772 103709..103749 +
1680791594.940855-CDS-P-littoralis_Contig772:106598..1068321680791594.940855-CDS-P-littoralis_Contig772:106598..106832Pylaiella littoralis U1_48CDSP-littoralis_Contig772 106599..106832 +
1680791594.9542532-CDS-P-littoralis_Contig772:107098..1073831680791594.9542532-CDS-P-littoralis_Contig772:107098..107383Pylaiella littoralis U1_48CDSP-littoralis_Contig772 107099..107383 +
1680791594.9671104-CDS-P-littoralis_Contig772:107673..1077421680791594.9671104-CDS-P-littoralis_Contig772:107673..107742Pylaiella littoralis U1_48CDSP-littoralis_Contig772 107674..107742 +
1680791594.9796264-CDS-P-littoralis_Contig772:107967..1080751680791594.9796264-CDS-P-littoralis_Contig772:107967..108075Pylaiella littoralis U1_48CDSP-littoralis_Contig772 107968..108075 +
1680791594.995483-CDS-P-littoralis_Contig772:108329..1085301680791594.995483-CDS-P-littoralis_Contig772:108329..108530Pylaiella littoralis U1_48CDSP-littoralis_Contig772 108330..108530 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig772.24.1

>prot_P-littoralis_Contig772.24.1 ID=prot_P-littoralis_Contig772.24.1|Name=mRNA_P-littoralis_Contig772.24.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=333bp
MQRLFEPPSPDRPPSLLNAACCSVVPLLLIVWNQTFLILGILGMPSTWLD
VLTLDLDLVGLLKESPSSLGGFISVFGTLLAFVRPTIPGDSPHMLRTLFP
LAAWFLFSDEATATPTNLIDDDALESFFYVNGICTTHRMALATGAELSEM
FNKNVTVVHNPTDSALMDLAECIIGKLWTGQSFATSKPSSLLLDKLLKTL
KDTTIPKVVLVAHSQGTIIASDVLGRLWNAVAMEKLEMYNLANAAHWMDQ
RDGYPYIESLCNQRDSVAMLGANAPERVKKMWNIDIAGPVLYPSTSRWGH
MISAHYLKHLKNGDYPHSKLRTYMSNTTAPST*
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mRNA from alignment at P-littoralis_Contig772:103396..108530+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig772.24.1 ID=mRNA_P-littoralis_Contig772.24.1|Name=mRNA_P-littoralis_Contig772.24.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5135bp|location=Sequence derived from alignment at P-littoralis_Contig772:103396..108530+ (Pylaiella littoralis U1_48)
ATGCAGCGGCTTTTCGAGCCGCCGAGCCCCGACAGGCCACCTTCCCTCCT GAACGCAGCATGTGAGTACTTCGAGGTATGATACACATACTTGCATGTTT GTATCAAATCATATGTATGATACCACAAAAAGCTGGATCAGGCTATCCTC TTGTGTAAGAGTAGTAGTTATCCTCTCATGGCAATTTCCCGCCTGAGTAA CAGATTGATACAAGGAAGTACTTCGTCCGCGACATACTTTTCGAATCATT GTTCGAAGATGTCGAAGTGCACCAACCATTGACAACAGATTCTCCCACCG CCGTGCCTGATAGGTTGCAGCGTGGTGCCGCTGCTGCTCATCGTGTGGAA TCAGGTGAGGTTCTTACCAACCTCTGGTTTGAAAAAAATGCCCTTCTTCT TCTGCTGTGCACGCGGGTGTGTGTCTGTTATCATCCCGTTCATTGGATCC AATCATCTACAAGTAGTGTAGGTGATATAGACGCAAACACTTTTACTCCC CATCTTGTAGGGAAAAACGTCCTCTTGTGGACCCTTTCTTGAACAGAACC GTATCACATGACGTAAAAAGTCCCAGTTCGAGTGTAATTTCGCTTGCATT TCCAAGTCACGACCTGATGGTCCGCAGGTTTCGAGGTTACCAAACTGAAC GATCGGGGCGACCGATAAGACTTGGAGAAAAATCACAACACAGCAGACAG CAGTAGTAGTACTACCACCGTGTCTAAACAAGCAGTTGGACTTTCATACC GATATACGGAGTATATCATACCGTAAACTACGGAATTAACCCCCCCCCTT AGAGTTTCCCCCCCCCCCCATCACCTTTACAGCCTGCCACCATGTATTCT TTGATTTCCCCCGGGGGTAGATCGTTTTCGCCAAAAAAAAAAAGCTCCCC CGGGGTACGGCGATCTCCCACCGGGATACAATTTTTTCACGAGTTCCCCC CGGGGGGGATGTATTTGCGCTTGTGGATGAGTCGTTTTTTTGCATGGCGA AGGACAAAAGCATGACAGGGGTACAGAAAATTAATCGTCACCTCTGCGCT TCGAGCGAGATATATGTTGTACCGCGGCCAATTGGCATTCCAGGTTGTTT CTAGGGTACCTACGCGCTTGGTTTTTCATTGTTTTTCCCTGGAGTCACGG TAAAACGCATCAGCACAGAATGCCGACAGACCCTTCCTCTTCTTCGCTGA CGCGGACGGACGAGGTAAACTCCCCCAGCTGCTGCTCTCCTTGCTCTCTT CGTTCTCTTCACATTCTGTGCTCTTGTTATTTTCCGGGCCCTTCTGCCGC TTGTATGCTTGCTCGTAAACCTTATCCATCACGGTCGGCAACTGCTGTGT GTGTGTGTGTGTGTGTGTGTGTGGACCACCATTCTTTGCACAACCCCCCC GGGTAGACACCCCCCGGGGTAGCATGGGAAAAAAGAAAACAACCAACCCC CCCGGTACGTCAATTCCCCCCCGGGGGGTTTGATTTCAACCAAAAAAAAG ATCCCCCCTCCGGGGGGAAACTCCGTAGTTTACGGCATGTGTTCACCGAT GATTGTCTGAATCCTCGTTCAAACAAAGATTGATACGATGATGTATGTAG ACCCCGTGATGCGCCCACACGTGTCCTACAGACAGTGGGTAGGTGTAGAT TGGAGTCCAGAACAGATGGGAGACTAAACACATGTGCACACGCACGCACA CACGTTTGCCTCTTCGGGGGTGCATGGTGTAGACTGGCGCTCAGAACAGA TGGGAGACGAGACACGAGTTAACACCCCGCCGCTGGAAGTACGTTTGCTG TTGGTTCTGCTGTGACTCGACTGTTGTAATTCAGTGATGCACACGTAACC TGACATTCACGCGTGAGTTCGAACCCCAGCGCAGTAACACGGTCTGGGTT TTTTTCTCACAATGCGCGTGAAAGTGGAAAGCGATTAATTCGTGAGTTAA CAAAATTCGATCGTACCATTGACGAGGGAAAGGGATTGCTGTCCCCTTTC TCGCGATAAAAGCTCAACCAAACAAGGCAAGCACCGCAGAGGGAAGTGGA GAAAAAGAAAAAAAAACTCCTGTGTTGATTTCCCCCTGTGTGACCCCAGT TGGAGCGTCGACCTACCCGAAAGGTGCAGAGTGGCGTCCAATTAAAGGGA TGACAACACACACACACCACGTTGGAAGGTGTATCTTCTTCGGTCTTTCT TGGGTATTCCCTTGTAGTTTCTTTCTGTTTTTTTTATCTTCCTAGGGCTC AGCACTTTTTGTGACCACATCCTTGATTTTGGCGATGAGCTAATGTGAGA ATCTCTCAACAACAACAACACACGTACACACGTCTGCCTCTTCGTGCATA CTGTAGCGGCATGATACACTATAATCCACAGAGTTAATGGGAGGGAGGGG GCTCAACGATGAACGGTTTTTAAATTCCGGATGAACAAAGTCGGGCACGC GCTTCCTCATTGATTGGCGCAAGCGCCAGCCAGCCAGAGTGCATGATGAA TACTAATTATTTGGCTTCATTCGTGCCGCTTATTGACCCTAGGGCGCGAA CGTGTAGTTTTCTCGGGTACTTCTTCCAAATCAAGATAAATGCACTGCTG TATAAGGTTGCGACCAACCCGCAACCTGGACAATCACGGGGTGGTCGCGT GATCCATGTAATATGGTGCTTGTGTCGCTGATGGGGAAAACATAAAAACA TTAATTGAACGCTTGTCGGTGACAAACACAATATGTCAACTGTCACCAGA TGCAAGTAAGTTTGGCTGAGAAACTCAGGTCTACAGTGCGCTTCTCTATA TAATCCTGTACAATAGAGTACGAAGGGTGGAAACTAAACATGAAAATGAG CTTCGGTCATACTCTAACGATCCTTTTCTGCGGGCGCCAACTGTACTTTG TTGTCGCCAAGCCCCACAGACCCACACACACTTAAAACATGGAAAATGAG CCTCTGTCATACTGTAACGATCCTTCTCTGCGGGCGCCGACTGTACTTTG TTGTCACCAAGCCCCACAAAACCCACACACAAGACAAAGCGTTGGACGTG TATGTAGTGCTGATGTCGCCGATCGGGAAAACATGCAGGAGAACGTACTT CTGCCTCTGCGGCTGAAAAAGCTCGTGAAACAAGGCAGCATAGCAATCAG TGAATACAGCATATATCTAGAGTGAACCCTTCACGCTCTCGATGTCTTTC CAGACGTTTTTGATTCTAGGAATCCTAGGCATGCCATCAACCTGGTTGGA TGTGCTGACGTTGGATCTGGACTTGGTTGGGCTGCTCAAGGAATCGCCAT CTTCACTCGGTGGCTTCATCTCGGTGTTTGGAACCCTCCTGGCATTCGTG CGGCCCACCATCCCTGGAGACTCGCCCCACATGCTGCGCACCCTGTTTCC GCTGGCTGCATGGTTTCTTTTCTCCGATGAAGCTACGGTGAGACATGAAG CATTCGCGACAGGCATAACCCGCAGCTATAAGTTCGCGAAACCTATCCAA AAGTGGTATCGACAGGTACTGCTGTGCTTTTGGTTGTCACCTCGTCTGTA GCCCGCACCGTTACGAAACAAATGTGCTACAGTAGAAATTACCATACCTG GGTTCAGGTCGATATCGAAATCTAGATTAAAAAAAAAAGGGTGTTGGCGC TCCTGTTTTCAATTCCAAAATCTCCTCCCACTTGTTGTACCCGACTTTGT CAGGCTACTCCAACCAATTTGATCGACGATGATGCCCTGGAGAGTTTCTT CTACGTGAACGGAATCTGCACAACGCACAGAATGGCTCTGGCTACCGGCG CCGAATTGAGTGAAATGTTCAACAAGAACGTCACGGTGGTGCATAATCCG ACCGATTCTGCTTTGATGGACCTCGCCGAATGCATAATCGGAAAATTGTG GACGGGACAGAGCTTCGCGACCAGCAAGCCCTCTTCCCTGCTTTTGGACA AGCTGCTGAAAACTCTAAAAGACACCACGATACCTAAGGTTCGCTCTTCC ACTCGCATACGTTTGTCCTCGGCGTGTTGCACGAGGCTTCTTTCTCCCCC TCTCTCTCTAACGCTCCATCATGCTGGTCGTAGGATTTTGGCGCTGGTTG AAAGACGTATCAAAGGTAGCTTGCCTGTGCAAACGTTCTTTGGGCCTGCC GCTTATTCGTGGTTATACCGAAACTATACGAGGTGGTGCCTGCATGTACT GCTTGTCCTCCGGTCTTGTGGTATTTCGTACTCATCTCTTCCCCCCGATG CATTTCTATAATGCTTTCGCCGTTGCAGGTAGTTCTCGTCGCACATTCTC AGGGGACCATCATCGCGAGCGACGTGCTTGGTCGGCTGTGGAATGCTGTC GATGCCGGCGAGCTGCCACAGGCAAGCAACAGCCTTTGACGACGTACCAG TCACACCTAGTGCGTGCCTGTAAACAAACACGTCAGAAGTTTTTGTGCGT ACTTCGTGACCAGGTCAAATCATTTATGGGCTTCCATCGTTGTATCACAG CAGTGTACAGTTTGGCGTGATATGTGGTGACATCAAAAAGAGTCCACTAT TCAAATCCCCTCTTGAAAGCAGGTAGCCATGGAAAAGCTGGAAATGTACA ACCTGGCCAACGCCGCGCACTGGATGGACCAGAGAGACGGATACCCCTAT ATCGAATCTCTCTGCAACCAGCGTGATTCGGTAAGGAATCGGCCGTCTGT ACTTCAGCCAATCGATAGACCTTTATGGGTGTATGTGTTATTCTACTGTG CCAGGTATTACTACACAAGTCAACGTGAGTTCGTACTTAAGGGGCTTTTG AATCGGAGGTGATTCGGCTGACTCAAAGGAAATCCTTTGGATTGACATGC CGTGGGTTTTTATCGCCGAAGGCCAAGGAATCATCTCGCTCCGCAACCGA TCTTACAGGCGCTTTTTTTTCTACCTCTTAGCAGGTCGCTATGCTAGGGG CAAACGCCCCCGAGAGGGTAAAGAAAATGTGGAACATCGACATCGCAGGT CCAGTTCTCTACCCTTCGACCAGCCGCTGGGGGCACATGATCAGCGCCCA CTACTTGAAGCACCTCAAGAATGGCGACTACCCTCACTCCAAACTCCGCA CCTACATGAGCAACACCACCGCGCCCTCGACGTGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig772:103396..108530+

>mRNA_P-littoralis_Contig772.24.1 ID=mRNA_P-littoralis_Contig772.24.1|Name=mRNA_P-littoralis_Contig772.24.1|organism=Pylaiella littoralis U1_48|type=CDS|length=999bp|location=Sequence derived from alignment at P-littoralis_Contig772:103396..108530+ (Pylaiella littoralis U1_48)
ATGCAGCGGCTTTTCGAGCCGCCGAGCCCCGACAGGCCACCTTCCCTCCT
GAACGCAGCATGTTGCAGCGTGGTGCCGCTGCTGCTCATCGTGTGGAATC
AGACGTTTTTGATTCTAGGAATCCTAGGCATGCCATCAACCTGGTTGGAT
GTGCTGACGTTGGATCTGGACTTGGTTGGGCTGCTCAAGGAATCGCCATC
TTCACTCGGTGGCTTCATCTCGGTGTTTGGAACCCTCCTGGCATTCGTGC
GGCCCACCATCCCTGGAGACTCGCCCCACATGCTGCGCACCCTGTTTCCG
CTGGCTGCATGGTTTCTTTTCTCCGATGAAGCTACGGCTACTCCAACCAA
TTTGATCGACGATGATGCCCTGGAGAGTTTCTTCTACGTGAACGGAATCT
GCACAACGCACAGAATGGCTCTGGCTACCGGCGCCGAATTGAGTGAAATG
TTCAACAAGAACGTCACGGTGGTGCATAATCCGACCGATTCTGCTTTGAT
GGACCTCGCCGAATGCATAATCGGAAAATTGTGGACGGGACAGAGCTTCG
CGACCAGCAAGCCCTCTTCCCTGCTTTTGGACAAGCTGCTGAAAACTCTA
AAAGACACCACGATACCTAAGGTAGTTCTCGTCGCACATTCTCAGGGGAC
CATCATCGCGAGCGACGTGCTTGGTCGGCTGTGGAATGCTGTAGCCATGG
AAAAGCTGGAAATGTACAACCTGGCCAACGCCGCGCACTGGATGGACCAG
AGAGACGGATACCCCTATATCGAATCTCTCTGCAACCAGCGTGATTCGGT
CGCTATGCTAGGGGCAAACGCCCCCGAGAGGGTAAAGAAAATGTGGAACA
TCGACATCGCAGGTCCAGTTCTCTACCCTTCGACCAGCCGCTGGGGGCAC
ATGATCAGCGCCCACTACTTGAAGCACCTCAAGAATGGCGACTACCCTCA
CTCCAAACTCCGCACCTACATGAGCAACACCACCGCGCCCTCGACGTGA
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