mRNA_P-littoralis_Contig771.23.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig771.23.2
Unique NamemRNA_P-littoralis_Contig771.23.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig771.23.2 vs. uniprot
Match: A0A6H5JSP9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSP9_9PHAE)

HSP 1 Score: 676 bits (1745), Expect = 5.010e-239
Identity = 359/447 (80.31%), Postives = 385/447 (86.13%), Query Frame = 3
Query:   48 DAMVSEPRSMAVRTVLIALVANLSVEKCCGFVAAPASLARGNSGWAR--NPSPFSSAPSTAAAVGRTRATMVAVEVAAGQEQLEKLKFLTPETARAAKAAVGTPAYVYDAASLKANAEACLAFPNAYGLTVRYAMKSLPNKAVLQLFHSLGLKFDCSSGWEVERAIAAGVPPESLCLSTQELPTDAAELLKKGVDINACSLSQLRKIAEEAPGSSVGVRFNPGMGSGGTKSTNVGGLASSFGIWYEWVDEVKEICAAGDLTVSRVHTHIGSGSDPAVWQKVSGMSLDLVRQFPTVKTLNLGGGYKVGRMSGEVSTDLQAIGASVMGGFEAFAKETGRELKLEIEPGTFLVANAGSLVCTVQDVVSTGSEGYEFIKLDAGMTELLRPSLYGAPHPIIVVPAEGEGGDATAEYVVVGHCCESGDLMTPIPGAASDIDRRLLNKAEIGEI 1382
            D M   PRS A R V +ALVA+L+V+ C  F+   ++LARG    AR      F+SA ST       R  MVA E A GQ+QLE LKFLTPETARA KAAVGTPAYVYDAASLKANAEACLAFPNAYGLTVRYAMKSLPNKAVLQLF  LGL FDCSSG+EVERAIAAGVPP+SLCLS+QELP DAAELLK GVDINACSLSQLR+IAEEAPGSSVGVRFNPG+GSGGTKSTNVGG +SSFGIWYEW DEVKEICA GDLTVSR+HTHIGSGSDPAVWQKVSGMSLDLVRQFPTV TLNLGGGYKVGRMSGE STDLQAIGA VM  FEAFA+ETGR+LKLEIEPGTFLVANAGSLVCT QD+VSTGS GYEFIKLDAGMTELLRPSLYGA HPI+VVPAEGEG   TAEYVVVGHCCESGDL+TP+ GAAS+I+RR L K EIG++
Sbjct:   82 DTMAPTPRSRASRLVAVALVASLTVQVCVAFLTTSSALARGRE-CARLGRSGGFASASST-------RVEMVAAEAAVGQKQLETLKFLTPETARATKAAVGTPAYVYDAASLKANAEACLAFPNAYGLTVRYAMKSLPNKAVLQLFQGLGLHFDCSSGFEVERAIAAGVPPQSLCLSSQELPPDAAELLKMGVDINACSLSQLRRIAEEAPGSSVGVRFNPGLGSGGTKSTNVGGPSSSFGIWYEWADEVKEICAGGDLTVSRIHTHIGSGSDPAVWQKVSGMSLDLVRQFPTVTTLNLGGGYKVGRMSGEQSTDLQAIGAPVMEDFEAFAQETGRKLKLEIEPGTFLVANAGSLVCTAQDLVSTGSGGYEFIKLDAGMTELLRPSLYGALHPIVVVPAEGEGDGDTAEYVVVGHCCESGDLLTPVSGAASEIERRTLAKVEIGDL 520          
BLAST of mRNA_P-littoralis_Contig771.23.2 vs. uniprot
Match: A0A836CQQ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQQ3_9STRA)

HSP 1 Score: 480 bits (1235), Expect = 8.270e-164
Identity = 245/369 (66.40%), Postives = 287/369 (77.78%), Query Frame = 3
Query:  279 QEQLEKLKFLTPETARAAKAAVGTPAYVYDAASLKANAEACLAFPNAYGLTVRYAMKSLPNKAVLQLFHSLGLKFDCSSGWEVERAIAAGVPPESLCLSTQELPTDAAELLKKGVDINACSLSQLRKIAEEAPGSSVGVRFNPGMGSGGTKSTNVGGLASSFGIWYEWVDEVKEICAAGDLTVSRVHTHIGSGSDPAVWQKVSGMSLDLVRQFPTVKTLNLGGGYKVGRMSGEVSTDLQAIGASVMGGFEAFAKETGRELKLEIEPGTFLVANAGSLVCTVQDVVST-GSEGYEFIKLDAGMTELLRPSLYGAPHPIIVVPAEGEGGDATAEYVVVGHCCESGDLMTPIPGAASDIDRRLLNKAEIGEI 1382
            + +LE+L+FLTPETA A ++  GTPAYVYD ASLKANA  CL+FPNA+GLTVR+AMKS PN AVLQLF+S+GL  D SSGWEV RA+AAGVP + + LSTQELP D AELL  GV +NACSLSQ    A   PG  VG+R NPG+GSGGTK TNVGG  SSFGIW+E + E + I A   L V+R+HTHIGSGSDPAVWQ+VSG+SLDL+R+FPT   LNLGGGYKVGRMS E STDL+ IG  V G FEAFA ETGR L LEIEPGTFLVAN G++V T+QD+VST G EG+ FIKLDAGMT+LLRPSLYGA HP++ +PA G        YVVVGHCCESGD++TP PG    I  R+L +A IG++
Sbjct:    9 ETKLEQLRFLTPETAEAVRSTYGTPAYVYDVASLKANARECLSFPNAFGLTVRFAMKSCPNAAVLQLFNSMGLHIDASSGWEVRRAMAAGVPADHISLSTQELPRDFAELLGAGVRVNACSLSQASAAALALPGHHVGLRVNPGLGSGGTKRTNVGGPGSSFGIWHEQLGEAEAIIAKHGLHVARIHTHIGSGSDPAVWQRVSGLSLDLMRRFPTATHLNLGGGYKVGRMSYEYSTDLKVIGEPVKGDFEAFAAETGRRLHLEIEPGTFLVANVGAIVSTIQDIVSTSGDEGHTFIKLDAGMTDLLRPSLYGAQHPLVTLPAGGAKRGPPRPYVVVGHCCESGDILTPAPGEPDVIAERVLGEARIGDV 377          
BLAST of mRNA_P-littoralis_Contig771.23.2 vs. uniprot
Match: A0A7R9Y6N3_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9Y6N3_9VIRI)

HSP 1 Score: 474 bits (1219), Expect = 4.210e-161
Identity = 241/364 (66.21%), Postives = 281/364 (77.20%), Query Frame = 3
Query:  291 EKLKFLTPETARAAKAAVGTPAYVYDAASLKANAEACLAFPNAYGLTVRYAMKSLPNKAVLQLFHSLGLKFDCSSGWEVERAIAAGVPPESLCLSTQELPTDAAELLKKGVDINACSLSQLRKIAEEAPGSSVGVRFNPGMGSGGTKSTNVGGLASSFGIWYEWVDEVKEICAAGDLTVSRVHTHIGSGSDPAVWQKVSGMSLDLVRQFPTVKTLNLGGGYKVGRMSGEVSTDLQAIGASVMGGFEAFAKETGRELKLEIEPGTFLVANAGSLVCTVQDVVSTGSEGYEFIKLDAGMTELLRPSLYGAPHPIIVVPAEGEGGDATAEYVVVGHCCESGDLMTPIPGAASDIDRRLLNKAEIGEI 1382
            + L FLTPE A A +   GTP++VYDA +L+A A+  LAFPNAYGLTVRYAMK+ PN A+L+LF+  GL  D SSG+EV RA+AAGVPPE++ LSTQELP   AEL++ GV +NACSL QLR+     PG  VG+RFNPG+GSGGT  TNVGG +SSFGIW+E + E +EI AA DL V R+HTHIGSGSDPAVWQKVSGMSLDL RQFP V  LNLGGGYKVGRMS E STDLQ +G  V   F AFA+ETGREL LEIEPGTFL+ANAG+LV  VQDVVSTG+EG+ FIKLD+GMTE+LRPSLYGA HPI++V   G   +    YVVVGHCCESGDLMTP P     I  R L  AE+G++
Sbjct:   34 DTLGFLTPELAEAVRGCAGTPSFVYDATTLRAQAQKALAFPNAYGLTVRYAMKASPNAAILKLFNDEGLHIDASSGYEVRRAMAAGVPPENISLSTQELPDFFAELVELGVKVNACSLEQLRRFGAAFPGGEVGLRFNPGLGSGGTGKTNVGGPSSSFGIWHESLPECQEIAAAHDLKVVRIHTHIGSGSDPAVWQKVSGMSLDLCRQFPDVTHLNLGGGYKVGRMSYEASTDLQVVGEPVTDAFRAFAEETGRELALEIEPGTFLLANAGALVTAVQDVVSTGAEGHNFIKLDSGMTEVLRPSLYGAQHPIVLVKNGGTAAEGDESYVVVGHCCESGDLMTPAPDEPEVITERALGAAEVGDL 397          
BLAST of mRNA_P-littoralis_Contig771.23.2 vs. uniprot
Match: A0A7S1XR44_9STRA (Hypothetical protein (Fragment) n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XR44_9STRA)

HSP 1 Score: 464 bits (1195), Expect = 3.970e-158
Identity = 239/365 (65.48%), Postives = 274/365 (75.07%), Query Frame = 3
Query:  288 LEKLKFLTPETARAAKAAVGTPAYVYDAASLKANAEACLAFPNAYGLTVRYAMKSLPNKAVLQLFHSLGLKFDCSSGWEVERAIAAGVPPESLCLSTQELPTDAAELLKKGVDINACSLSQLRKIAEEAPGSSVGVRFNPGMGSGGTKSTNVGGLASSFGIWYEWVDEVKEICAAGDLTVSRVHTHIGSGSDPAVWQKVSGMSLDLVRQFPTVKTLNLGGGYKVGRMSGEVSTDLQAIGASVMGGFEAFAKETGRELKLEIEPGTFLVANAGSLVCTVQDVVSTGSEGYEFIKLDAGMTELLRPSLYGAPHPIIVVPAEGEGGDATAEYVVVGHCCESGDLMTPIPGAASDIDRRLLNKAEIGEI 1382
            +E L+FL PETAR   A VGTPAYVY  A L   A+  LAFPNAYGLT RYAMKS PN A+LQLF  LGL  D SSG+EV RAIAAGV P  + LSTQELP D AEL+  G+ +NACS+ QL++     PG+ VG+RFNPG+GSGGT  TNVGG  SSFGIW+E  DE  EI  A    V R+HTHIGSGSDPAVWQ+VSGMSLDL R+FP V TLNLGGGYKVGRM GE STDL  +GA V   FEAFA +TGREL+LEIEPGTFL+ANA SL+C VQDVV+TG+ G +FIKLDAGMTE+LRPSLYGA HP++ +P    G      YVVVGHCCESGDL+TP PG    I  R L+K EIG++
Sbjct:   50 METLRFLNPETAREIAAKVGTPAYVYSEAELTTQAKTALAFPNAYGLTARYAMKSSPNAAILQLFDKLGLHIDASSGFEVRRAIAAGVDPSKISLSTQELPEDFAELVGLGIKVNACSVEQLKRYVGALPGTPVGLRFNPGLGSGGTGKTNVGGPDSSFGIWHELADECAEIAGATGTPVERIHTHIGSGSDPAVWQRVSGMSLDLCRRFPDVVTLNLGGGYKVGRMIGEASTDLGVVGAPVKAAFEAFAADTGRELRLEIEPGTFLLANACSLLCGVQDVVTTGAAGRKFIKLDAGMTEVLRPSLYGAQHPLVTIPKAQTG--EFENYVVVGHCCESGDLLTPAPGEPETIAERSLSKVEIGDL 412          
BLAST of mRNA_P-littoralis_Contig771.23.2 vs. uniprot
Match: A0A7S2SXD7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SXD7_9STRA)

HSP 1 Score: 464 bits (1194), Expect = 6.840e-157
Identity = 238/367 (64.85%), Postives = 284/367 (77.38%), Query Frame = 3
Query:  288 LEKLKFLTPETARAAKAAVGTPAYVYDAASLKANAEACLAFPNAYGLTVRYAMKSLPNKAVLQLFHSLGLKFDCSSGWEVERAIAAGVPPESLCLSTQELPTDAAELLKKGVDINACSLSQLRKIAEEAPGSSVGVRFNPGMGSGGTKSTNVGGLASSFGIWYEWVDEVKEICAAGDLTVSRVHTHIGSGSDPAVWQKVSGMSLDLVRQFPTVKTLNLGGGYKVGRMSGEVSTDLQAIGASVMGGFEAFAKETGRELKLEIEPGTFLVANAGSLVCTVQDVVSTGSEGYEFIKLDAGMTELLRPSLYGAPHPIIVVPAEG--EGGDATAEYVVVGHCCESGDLMTPIPGAASDIDRRLLNKAEIGEI 1382
            +E LKFLTP++ARA +  VGTPAY Y   +LK NA A LAFP+AYGLT R+AMKS PN A+LQLF S+GL FD SS +EV RA+AAG+PPE+L LSTQEL  D   L+  G+ INACSL QLR+  E+ PGS VG+RFNPG+GSGGT  TNVGG +SSFGIW+E  D+V  I    DL V R+HTHIGSGSDPAVWQ+VSGMSLDLVR+FP V  LNLGGGYKVGRMS E STDL  +GA V   F AFA+ETGREL LEIEPGTFLVANAG++VC+VQD V+TGSEG+ F+KLDAGMT++LRPSLYGA HP++VV +E   +  ++T   VVVGHCCESGDL++  PG    ID R +  A  G++
Sbjct:   59 VETLKFLTPDSARAVRETVGTPAYAYHLPTLKENAAAVLAFPHAYGLTPRFAMKSCPNAAILQLFSSMGLHFDASSTFEVRRAMAAGIPPENLSLSTQELGPDFENLVPLGLKINACSLQQLRRFGEKFPGSEVGIRFNPGLGSGGTGKTNVGGPSSSFGIWHELADDVAAIAEEFDLKVVRIHTHIGSGSDPAVWQRVSGMSLDLVRRFPDVSILNLGGGYKVGRMSDEGSTDLSVVGAPVKDQFVAFAEETGRELHLEIEPGTFLVANAGAVVCSVQDKVTTGSEGHTFLKLDAGMTDVLRPSLYGAQHPLVVVSSEPSRDADESTESVVVVGHCCESGDLLSCAPGEPETIDERAMKAAMCGDL 425          
BLAST of mRNA_P-littoralis_Contig771.23.2 vs. uniprot
Match: D7FY10_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY10_ECTSI)

HSP 1 Score: 457 bits (1176), Expect = 9.450e-157
Identity = 227/255 (89.02%), Postives = 240/255 (94.12%), Query Frame = 3
Query:  618 GVDINACSLSQLRKIAEEAPGSSVGVRFNPGMGSGGTKSTNVGGLASSFGIWYEWVDEVKEICAAGDLTVSRVHTHIGSGSDPAVWQKVSGMSLDLVRQFPTVKTLNLGGGYKVGRMSGEVSTDLQAIGASVMGGFEAFAKETGRELKLEIEPGTFLVANAGSLVCTVQDVVSTGSEGYEFIKLDAGMTELLRPSLYGAPHPIIVVPAEGEGGDATAEYVVVGHCCESGDLMTPIPGAASDIDRRLLNKAEIGEI 1382
            GVDINACSLSQLRKIAEEAPGSSVGVRFNPG+GSGGTKSTNVGG +SSFGIWYEW DEVKEICA GDLTVSR+HTHIGSGSDPAVWQKVSGMSLDLVRQFPTV TLNLGGGYKVGRMSGE STDLQAIGA VMG FEAFA+ETGR+LKLEIEPGTFLVANAGSLVCT QD+VSTGS GYEFIKLDAGMTELLRPSLYGA HPI+VVPAEGEGG  TAEYVVVGHCCESGDL+TP+ GAAS+I+RR L KAEIG++
Sbjct:    2 GVDINACSLSQLRKIAEEAPGSSVGVRFNPGLGSGGTKSTNVGGPSSSFGIWYEWADEVKEICAGGDLTVSRIHTHIGSGSDPAVWQKVSGMSLDLVRQFPTVTTLNLGGGYKVGRMSGEQSTDLQAIGAPVMGDFEAFAEETGRKLKLEIEPGTFLVANAGSLVCTAQDLVSTGSGGYEFIKLDAGMTELLRPSLYGALHPIVVVPAEGEGGGETAEYVVVGHCCESGDLLTPVSGAASEIERRTLAKAEIGDL 256          
BLAST of mRNA_P-littoralis_Contig771.23.2 vs. uniprot
Match: A0A7S0KQC7_9CHLO (Hypothetical protein n=2 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0KQC7_9CHLO)

HSP 1 Score: 453 bits (1165), Expect = 8.180e-153
Identity = 235/375 (62.67%), Postives = 280/375 (74.67%), Query Frame = 3
Query:  261 VEVAAGQEQLEKLKFLTPETARAAKAAVGTPAYVYDAASLKANAEACLAFPNAYGLTVRYAMKSLPNKAVLQLFHSLGLKFDCSSGWEVERAIAAGVPPESLCLSTQELPTDAAELLKKGVDINACSLSQLRKIAEEAPGSSVGVRFNPGMGSGGTKSTNVGGLASSFGIWYEWVDEVKEICAAGDLTVSRVHTHIGSGSDPAVWQKVSGMSLDLVRQFPTVKTLNLGGGYKVGRMSGEVSTDLQAIGASVMGGFEAFAKETGRELKLEIEPGTFLVANAGSLVCTVQDVVSTG-SEGYEFIKLDAGMTELLRPSLYGAPHPIIVVPAEGEGGDATAEYVVVGHCCESGDLMTPIPGAASDIDRRLLNKAEIGEI 1382
            V   A   ++E L+FLTP  A   KA  GTP YVYD A+L A A+A  AFPNA+GLTVRYAMK+ PNKA+L++F S GL  D SSG+E ERA+ AG   E + LS+QELPT   +L+K+GV +NACSLSQL +  E  PG  VGVRFNPG+GSGGT  TNVGG +SSFGIWYE + +VKEI     L V R+HTHIGSGSDPAVWQKVSGMSLDL R+FP V TLNLGGGYKVGRMS E STDLQ +G  V   FEAFAK+TGR+LKLEIEPGTFL+AN+ ++V +VQD V TG SEG+ F+KLD GMTE+LRPSLYG+ HP++ V A G     TA+YVVVGHCCESGDL+TP P     I  R + +  IG++
Sbjct:   35 VRATAADGRIETLRFLTPADAAKVKATFGTPTYVYDRATLVAQADAAKAFPNAFGLTVRYAMKASPNKAILKIFKSRGLNIDASSGYECERAMRAGFAAEDISLSSQELPTFFPDLVKQGVKVNACSLSQLERFGEVFPGGEVGVRFNPGLGSGGTGKTNVGGPSSSFGIWYESLPKVKEIVEKYKLKVVRIHTHIGSGSDPAVWQKVSGMSLDLCREFPGVTTLNLGGGYKVGRMSYEKSTDLQVVGVPVKEAFEAFAKDTGRQLKLEIEPGTFLLANSCAVVTSVQDKVVTGTSEGHTFLKLDMGMTEVLRPSLYGSQHPLVSVSAAGTLPTTTADYVVVGHCCESGDLLTPAPDEPETISERTMGEVNIGDL 409          
BLAST of mRNA_P-littoralis_Contig771.23.2 vs. uniprot
Match: A0A7S0WW88_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WW88_9CHLO)

HSP 1 Score: 453 bits (1165), Expect = 3.680e-152
Identity = 229/366 (62.57%), Postives = 281/366 (76.78%), Query Frame = 3
Query:  288 LEKLKFLTPETARAAKAAVGTPAYVYDAASLKANAEACLAFPNAYGLTVRYAMKSLPNKAVLQLFHSLGLKFDCSSGWEVERAIAAGVPPESLCLSTQELPTDAAELLKKGVDINACSLSQLRKIAEEAPGSSVGVRFNPGMGSGGTKSTNVGGLASSFGIWYEWVDEVKEICAAGDLTVSRVHTHIGSGSDPAVWQKVSGMSLDLVRQFPTVKTLNLGGGYKVGRMSGEVSTDLQAIGASVMGGFEAFAKETGRELKLEIEPGTFLVANAGSLVCTVQDVVSTGSEGYEFIKLDAGMTELLRPSLYGAPHPIIVVPAEGEGGDAT-AEYVVVGHCCESGDLMTPIPGAASDIDRRLLNKAEIGEI 1382
            +E+L FLTPE A      VGTP YVYD  +LK  A+  L FPNAYGLTVRYAMKS PN A+LQ+F++ GL  D SSG+E  RA+ AG+P   + LS+QELP    +L  KGV +N CSLSQL +  +  PG+ VGVRFNPGMGSGG K TNVGG +SSFGIW+E + EV+ I A  +LTV R+HTHIGSGSDPAVWQKVSGMSLD+ RQFP V+TLNLGGGYKVGRM GE STDL+ IG  V+G FE FA+ETGR+L+LEIEPGTFL+AN+ S+V TVQDVVSTG +GY F+K+D GMT++LRPSLYG+ HP++VVP   +  +   A+YVVVGHCCESGDL++P P     + +R + KAEIG++
Sbjct:   86 VEQLNFLTPEMAYKVANEVGTPCYVYDMETLKRQADTTLRFPNAYGLTVRYAMKSSPNAAILQVFNAKGLHIDASSGFECIRAMEAGIPASHISLSSQELPAFFPDLCAKGVKVNCCSLSQLERYGQALPGTKVGVRFNPGMGSGGNKKTNVGGTSSSFGIWHESLPEVQAIAAKYNLTVERIHTHIGSGSDPAVWQKVSGMSLDICRQFPDVETLNLGGGYKVGRMEGEPSTDLELIGNPVVGEFEQFAEETGRKLRLEIEPGTFLMANSCSVVSTVQDVVSTGEDGYNFLKMDMGMTDVLRPSLYGSQHPLVVVPKSMKVAETEEAKYVVVGHCCESGDLVSPAPDEPETLFQRPMGKAEIGDL 451          
BLAST of mRNA_P-littoralis_Contig771.23.2 vs. uniprot
Match: A0A4D9D992_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D992_9STRA)

HSP 1 Score: 449 bits (1156), Expect = 3.210e-151
Identity = 230/385 (59.74%), Postives = 285/385 (74.03%), Query Frame = 3
Query:  234 GRTRATMVAVEVAAGQEQLEK--LKFLTPETARAAKAAVGTPAYVYDAASLKANAEACLAFPNAYGLTVRYAMKSLPNKAVLQLFHSLGLKFDCSSGWEVERAIAAGVPPESLCLSTQELPTDAAELLKKGVDINACSLSQLRKIAEEAPGSSVGVRFNPGMGSGGTKSTNVGGLASSFGIWYEWVDEVKEICAAGDLTVSRVHTHIGSGSDPAVWQKVSGMSLDLVRQFPTVKTLNLGGGYKVGRMSGEVSTDLQAIGASVMGGFEAFAKETGRELKLEIEPGTFLVANAGSLVCTVQDVVSTGSEGYEFIKLDAGMTELLRPSLYGAPHPIIVVPAEGEGGDATAEYVVVGHCCESGDLMTPIPGAASDIDRRLLNKAEIGEI 1382
            GR +  + A +  +G   LE+  L+FL P+T        GTP Y+YD A+LKA+A + L+FPNA+GLTVRYAMK+ PN A+L+LF++LGL  D SSG+E++RA+ AGVP   + LS+QELP+D    +  GV INACS+SQL++  E  PG  +G+RFNPG+GSGGT  TNVGG +S+FGIW+E + EVK + A   L V RVHTHIGSGSDPAVWQ V+ +SLDLVR+FP V+TLNLGGGYKVGRM  E STDL  IGA V   FE FA ETGR+L LEIEPGTFLVANAG+LVC VQD  ST +  + F+KLDAGMTE+LRPSLYGA HP++V+P +    D  A YVVVGHCCESGDL+TP PG A  +  R L  AEIG++
Sbjct:   38 GRRQLIVSAADGTSGSTSLERETLRFLNPDTVENLANQYGTPTYIYDMATLKASARSALSFPNAFGLTVRYAMKASPNAAILKLFNNLGLHIDASSGYEIQRAMRAGVPASHISLSSQELPSDFDSFVDLGVHINACSISQLQRFGERCPGGKIGLRFNPGVGSGGTGKTNVGGPSSAFGIWHELLPEVKRVVAEHKLQVVRVHTHIGSGSDPAVWQNVAALSLDLVREFPQVETLNLGGGYKVGRMRQEQSTDLAKIGAPVKEKFEDFALETGRKLHLEIEPGTFLVANAGALVCRVQDKTSTSA--HTFLKLDAGMTEVLRPSLYGAQHPLVVIPKDRTRADRAASYVVVGHCCESGDLLTPAPGEADTVSERELTSAEIGDL 420          
BLAST of mRNA_P-littoralis_Contig771.23.2 vs. uniprot
Match: A0A7S2CVR2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CVR2_9STRA)

HSP 1 Score: 441 bits (1133), Expect = 8.990e-149
Identity = 225/345 (65.22%), Postives = 261/345 (75.65%), Query Frame = 3
Query:  345 GTPAYVYDAASLKANAEACLAFPNAYGLTVRYAMKSLPNKAVLQLFHSLGLKFDCSSGWEVERAIAAGVPPESLCLSTQELPTDAAELLKKGVDINACSLSQLRKIAEEAPGSSVGVRFNPGMGSGGTKSTNVGGLASSFGIWYEWVDEVKEICAAGDLTVSRVHTHIGSGSDPAVWQKVSGMSLDLVRQFPTVKTLNLGGGYKVGRMSGEVSTDLQAIGASVMGGFEAFAKETGRELKLEIEPGTFLVANAGSLVCTVQDVVSTGSEGYEFIKLDAGMTELLRPSLYGAPHPIIVVPAEGEGGDATAEYVVVGHCCESGDLMTPIPGAASDIDRRLLNKAEIGE 1379
            GTPAYVYD ASL+ANA A LAFPNA+GLT RYAMK+ PN A+L+ F   GL FDCSSG+EV RA+ AGVP + L LSTQELP + AEL+  G+ +NACSLSQLR   E  PG+ VG+RFNPG+GSGGT  TNVGG +SSFGIWYEW +E   I A  +L V RVHTHIGSGSDPAVWQK +GMS+DL R FP V TLNLGGGYKV RM+ +  TDLQ  GA V   F  FA+ETGREL LEIEPGTFLVAN G++V TVQD VSTG  G+ F+KLDAGMT++LRPSLYGA HP+IVVPA+      T + VVVGHCCESGDL++  P     I  R L  AE+G+
Sbjct:    5 GTPAYVYDLASLRANAAATLAFPNAFGLTTRYAMKACPNGAILKFFAQQGLHFDCSSGYEVTRAMQAGVPADRLSLSTQELPENIAELVAMGIKVNACSLSQLRAFGEALPGADVGLRFNPGLGSGGTGKTNVGGPSSSFGIWYEWEEECAAIAAEHNLKVVRVHTHIGSGSDPAVWQKTAGMSIDLCRNFPDVVTLNLGGGYKVARMATDKFTDLQECGAPVKEIFTKFAEETGRELHLEIEPGTFLVANTGAVVSTVQDKVSTGPSGHTFLKLDAGMTDVLRPSLYGAQHPLIVVPADPAASRDTEKVVVVGHCCESGDLLSCAPDEPETISERELTMAEVGD 349          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig771.23.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JSP9_9PHAE5.010e-23980.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CQQ3_9STRA8.270e-16466.40Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9Y6N3_9VIRI4.210e-16166.21Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
A0A7S1XR44_9STRA3.970e-15865.48Hypothetical protein (Fragment) n=3 Tax=Phaeomonas... [more]
A0A7S2SXD7_9STRA6.840e-15764.85Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
D7FY10_ECTSI9.450e-15789.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S0KQC7_9CHLO8.180e-15362.67Hypothetical protein n=2 Tax=Ostreococcus mediterr... [more]
A0A7S0WW88_9CHLO3.680e-15262.57Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A4D9D992_9STRA3.210e-15159.74Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S2CVR2_9STRA8.990e-14965.22Hypothetical protein n=1 Tax=Florenciella parvula ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig771contigP-littoralis_Contig771:125603..132872 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FY10
PFAMsAA_kinase,Orn_Arg_deC_N,Orn_DAP_Arg_deC
Model size1530
Max annot lvl2759|Eukaryota
KEGG rclassRC00299
KEGG koko:K01586,ko:K01611,ko:K18408
KEGG ReactionR00178,R00451
KEGG Pathwayko00270,ko00300,ko00330,ko01100,ko01110,ko01120,ko01130,ko01230,map00270,map00300,map00330,map01100,map01110,map01120,map01130,map01230
KEGG ModuleM00016,M00034,M00133,M00525,M00526,M00527
Hectar predicted targeting categoryother localisation
Exons9
Evalue2.91e-158
EggNOG OGsCOG0019@1|root,KOG0622@2759|Eukaryota
EC3.6.4.13,4.1.1.20,4.1.1.50
Descriptionputrescine biosynthetic process from ornithine
Cds size1386
COG categoryE
BiGG ReactioniG2583_1286.G2583_3495
BRITEko00000,ko00001,ko00002,ko01000,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig771.23.2prot_P-littoralis_Contig771.23.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig771 125656..132781 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791594.0472565-UTR-P-littoralis_Contig771:125602..1256551680791594.0472565-UTR-P-littoralis_Contig771:125602..125655Pylaiella littoralis U1_48UTRP-littoralis_Contig771 125603..125655 +
1680791594.1748538-UTR-P-littoralis_Contig771:132781..1328721680791594.1748538-UTR-P-littoralis_Contig771:132781..132872Pylaiella littoralis U1_48UTRP-littoralis_Contig771 132782..132872 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791594.0632508-CDS-P-littoralis_Contig771:125655..1257271680791594.0632508-CDS-P-littoralis_Contig771:125655..125727Pylaiella littoralis U1_48CDSP-littoralis_Contig771 125656..125727 +
1680791594.0780234-CDS-P-littoralis_Contig771:127757..1279491680791594.0780234-CDS-P-littoralis_Contig771:127757..127949Pylaiella littoralis U1_48CDSP-littoralis_Contig771 127758..127949 +
1680791594.0891762-CDS-P-littoralis_Contig771:128294..1284641680791594.0891762-CDS-P-littoralis_Contig771:128294..128464Pylaiella littoralis U1_48CDSP-littoralis_Contig771 128295..128464 +
1680791594.099085-CDS-P-littoralis_Contig771:128999..1290861680791594.099085-CDS-P-littoralis_Contig771:128999..129086Pylaiella littoralis U1_48CDSP-littoralis_Contig771 129000..129086 +
1680791594.1140077-CDS-P-littoralis_Contig771:129963..1301541680791594.1140077-CDS-P-littoralis_Contig771:129963..130154Pylaiella littoralis U1_48CDSP-littoralis_Contig771 129964..130154 +
1680791594.1263094-CDS-P-littoralis_Contig771:130326..1304421680791594.1263094-CDS-P-littoralis_Contig771:130326..130442Pylaiella littoralis U1_48CDSP-littoralis_Contig771 130327..130442 +
1680791594.1381125-CDS-P-littoralis_Contig771:131213..1312881680791594.1381125-CDS-P-littoralis_Contig771:131213..131288Pylaiella littoralis U1_48CDSP-littoralis_Contig771 131214..131288 +
1680791594.1502082-CDS-P-littoralis_Contig771:131948..1322361680791594.1502082-CDS-P-littoralis_Contig771:131948..132236Pylaiella littoralis U1_48CDSP-littoralis_Contig771 131949..132236 +
1680791594.161465-CDS-P-littoralis_Contig771:132586..1327811680791594.161465-CDS-P-littoralis_Contig771:132586..132781Pylaiella littoralis U1_48CDSP-littoralis_Contig771 132587..132781 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig771.23.2

>prot_P-littoralis_Contig771.23.2 ID=prot_P-littoralis_Contig771.23.2|Name=mRNA_P-littoralis_Contig771.23.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=462bp
MVSEPRSMAVRTVLIALVANLSVEKCCGFVAAPASLARGNSGWARNPSPF
SSAPSTAAAVGRTRATMVAVEVAAGQEQLEKLKFLTPETARAAKAAVGTP
AYVYDAASLKANAEACLAFPNAYGLTVRYAMKSLPNKAVLQLFHSLGLKF
DCSSGWEVERAIAAGVPPESLCLSTQELPTDAAELLKKGVDINACSLSQL
RKIAEEAPGSSVGVRFNPGMGSGGTKSTNVGGLASSFGIWYEWVDEVKEI
CAAGDLTVSRVHTHIGSGSDPAVWQKVSGMSLDLVRQFPTVKTLNLGGGY
KVGRMSGEVSTDLQAIGASVMGGFEAFAKETGRELKLEIEPGTFLVANAG
SLVCTVQDVVSTGSEGYEFIKLDAGMTELLRPSLYGAPHPIIVVPAEGEG
GDATAEYVVVGHCCESGDLMTPIPGAASDIDRRLLNKAEIGEISSFFYVS
VFPCIGSRTFT*
back to top

mRNA from alignment at P-littoralis_Contig771:125603..132872+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig771.23.2 ID=mRNA_P-littoralis_Contig771.23.2|Name=mRNA_P-littoralis_Contig771.23.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=7270bp|location=Sequence derived from alignment at P-littoralis_Contig771:125603..132872+ (Pylaiella littoralis U1_48)
GACAGGTTGTTGCACACCTCAGCACCACCGCACACCAAACCAACCAAGAC GCCATGGTGTCGGAGCCGAGATCAATGGCTGTTCGGACGGTTCTGATTGC TCTTGTGGCTAATCTAAGTGTTGAGGTGCGTGATATCCCTTGGTAGAGGC TTTTTCTGGCCCCATTGTCGCTGCTGATGACCCAGACAGACAGGGGCAGG TGCTTGAAACATTCAGGAAACCTTCAACTTTGGTGTCTCATGGTACTTGC AGCATGAATGTTTATGTTTCTGCCTATCTATAATACTCGCGAGTAGGAAG CACGCAACCACATGACACATGTTTGCCAGTTGGGCTGCCCTAACATATTG TACGTATTGTGTCTTGGAGCAGGCGTCTATGAAGTAACTGGCCAATCCAC TGAGAGAACCGATGATACTTGTCAGATGGAGCCCTCTATGTTGCTGTGCT GTCGCAGTTCTCTCCACAGAGTTATAATCTGGGTGTAGAGCTAACCTGAG AAACATCAACACAACAAACACAATGCCTGTTGACCGTCAAATCGCTAAGT TTCAAAAAAAGCGATCGATTTTGCCCTCCCTCCTAGCACCACCTCCACCA TTGCGGCGGGCTGGTCGTGATACGACAGCAGTAGTACAGCAGTAGCAGTA TCATGCTGCTGCTGTTGTGCTCTTTCATCCTTCAAAGTTGACATTGCGCC ACGTCCATATCGTATGAGTTCTAGGTCGTTGCTTTCAGATTTAAAACACT CCCACGCCTGTCCCCGATACCTCCAAGAGTTCTTCAAGTACCCACAGGTA CAGTCCCAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTG TGTGTGTGTGTGTGTTGTGTGTGTGTGTGTGTTGTGTGTGTGTGCTGTCA TCCCTTCAATTGGACGCCACTCTACACCTCTCGGGTAGGTAGGCGCTCCA ACACAGTAGGAAGTCAACACAGGAGTTTTTTTCTTTTATTTATTTTTCTT TTCTTTCTCCACATCCTTGCCTTCATTTTTTCTCGAGAGAGGTGCGCCAG TGATTTGACCAGCACTATCATAGCACCCGAGGGGACCTGCACCTATCATA TTACAGAAAATCCCCAACGCACATCAGTCTGCACCTATTATCGGCATCAC ATGATCGGTTACAACTTGAGCGCACCAGTCGGGGTCACACAGGAGGAAAG TCAACGCACAGGATTTTTTTTAGTGGAAACAAAATAGACTCAACAGAGCG TTTTAAGCGATAGTCCTTGGATCGTTCCAACTGGCGAGCATCGCTTTGGA TGCCGTTTGCACCACATCTCCACTGATCTTGTTTTTTCTCGCCAGAAATA ATCTTTTGAAGTCAGACCTTTGGACGCCGTGTATCGCTTACCGGTGTGCA GCAGCAACCCATGGGTCTGATCGGCCCTACTCGTAGGTTTCTATTACCAA GAAATTAAAATGCTGCTTGTGCTCGTGTTGGGATGGGGCAGTTCGCGGTG GCCCAACCCCAGCCCTAACCCTCTCCCGGACCGCTCTGTGCGCCATGGAG GATTCAGCCCGAATCCGGGTGTTAAATCACTAAAAAAATATCTTGGTCTG AAACAGACGGGTAGAACTCGTCAATTTCCGCCATTGCTGCTGCTGCTGCT GCTACTGCTGCTGCTGCTGCTGCTGCTGCTGAATCCTAATCAATTCTGTA AGCAACGGACGCAACGGGGGATTGGTCTTAGTCAGGGACCCAATCCTGAT AAATACTAAATACATCCAAGTCCGAAGCAGGCGGGTAGAAACCGTCCATC CCTGCTGTTGCAGTTAGTGCTGCTGTTGCTGCCACATTTTGCAGCAGCAG CAGCAGAAGCTATTACCGTTGTTCTCTCCGTAGTGCCCGTCCGTTCACCC CCCCACGCCCCCCCCCCCCCAAGCTAGTGACCTCGTTCACCCTTTTGTGT GTGACCTCGTTTTGGAAAACTTCTTTGAAACATCCCCCGGCGTCAAAAGA AGAAACACGAACACGGACACGAACACGAATGCGTACCCGTCTCGCGCAAG ACGGGGCTCGGCGGAATACGCAGTTCCATTTTACACTGCAGAGGACCCCA CACAACACGACCTTCTCTTTACTTTTTCTGGTCCTCGCTCGTCCCACATT AAAAGAAATGCTGCGGATTCGTGGCTGCTCCCGCCTCGCTGGCTCGGGGC AACTCTGGTTGGGCGAGGAATCCCTCTCCTTTTTCTTCTGCTCCTTCTAC TGCTGCTGCTGTAGGGAGGACGAGGGCCACGATGGTGGCCGTTGAGGTGG CCGCGGGGCAAGAACAGCTGGAGAAGCTCAAGTTCCTGACACCCGAGGTG GGGTGCGTTTGTTTGCACATGTGGTTTGCAAACATACCGACATGGCCGGA GTGCACGCGTGGTACACAAAATATCGCCATGTAGGGTGCACACGGTGGTA TGCTGGTAGATGGCTTTAGGGATTCCGGGAGGTGTTTCGCCATACGATAT GCACTACTTCGCACTTACGCCCAAGGGCTGTTGAGGGTCTGCTACAGTCA AAGGGGCACATTCAAAGGCACCTTTGATACTTGTAGCCCGTACATTATTT CCAACATTTTTTCCTGTATTGTTGCGTCGTTTCGTTTTCGGCGCCGTGTC TGTCGGGTCGTGTTCGGCCGGGCTGAACGTCTGCTTGTTCAGACAGCCCG CGCCGCCAAAGCCGCGGTCGGCACCCCGGCCTACGTGTACGACGCTGCGA GCTTGAAGGCCAACGCGGAGGCGTGCCTCGCGTTCCCCAACGCCTACGGC CTGACCGTGCGCTACGCCATGAAGAGCCTTCCCAACAAGGCGGTCCTGCA GCTCTTCCACAGGTACATGACAGGTCTGCATTGTTTTACGCCAAGCGCAC AGCAGCGAACAGGCGGCCCCATGTTTCAGGTACCTGAAACATGGGGCCGC CTGTTTATTGCTGTGCACCACAACGGGACCAGCTGTGTGCGTGTTGCTCG TCGCAAGGGGAGAGCGAGTTCCAATCTCCATGCTGTAAATATTGAAATTG CGAAGTTAAATAAAAATTCCTCCGCTTTTTTTTTATTTGGCGGTGCTTGC TTTCACATTGGCCCCTTTTCCCTCTTTTTTTTTTTGCTTTGGAAGCGCAT GTACCACATGGTATGATATGATTCCGCTACACACCACCAGGCAATTGGTG CGGAAACGTGTCTGTTGCTTGATCGCTTGTAAAGTTGTATCTTCTCAAAC TGACTGATCACTGCAACCTCGCTCTTTCGGCCGCGTGCTCCTCGTTCTGA TGCTGCTTCTTCTGCTGCCGTCGCCGCCGCCGCCGCCGCCGCCGCCGCAA TCTGTTCGTTCTATAATATTCCATGCACGCCTACCCTACCACACTAGCCT TGGGCTGAAGTTTGACTGCAGCAGCGGCTGGGAGGTAGAGAGGGCCATCG CCGCGGGAGTGCCCCCTGAGAGCCTGTGCCTGAGGTGAGCCCTCTCTTTT GTTCCATCAACTTGCTCGGCGGCGGTGCGTGATGGTGTATACCACACCCC CTTGACGGATTTTCCTGAAGCTGCTCGATCGTCGACTGCGGCACTCCACA ACGGAGATAAATAGAAGGGGGTGCAAGCTTCAAACGATGTCTACTTGTGC GCCGGTCGGCTGTGTTCCACGGTAGCCCCGTGCCTTATTTCAGCGTTCTT CGCTGGTTTTCCAAACCAACCCACAGGCCCCATTTCACGAAGTCCGGCGT ATCTGGCTACCATGACCTCACCTTCTGAAGCCCCCGGCAAACAAGTACAG CCTTGAAATATTCTCAAGAGAAAATTCTTGCTTTTTTGGGGGGGGGGGGG GGTAGAGGGCTGTCGAAGAATATATTCGTTCCCGGAAAGTTCTCGGCGAG ACTAATGGTTCAAACGCCGATCGTCCTTTTTCGGCTCCGACACTTCTCCT GCCGGAGATTTGTAGACCTCTGCTGGATCGGCCCGGGGTGTATGATGCAC ACCGTCGTGCGCGGCACTTGCGTATCCAATGCGCGATGGAGATTGCGGGA GGGTAGACGGCAGCCTCAGCGGTTCGGAAACCAAATTCTTTCGTCGCTGC GCTTCCTCCTGCTGAAGGGGCAGGGGGAGAAGGAGGAGGGGGGTTGGAGG GGGTGTGAAAGGTTGTAGAGTGGTGGGGGTGACGAAGCCTAGCGTTATTT TTGTGTACATCACGTAGAAAGCCGAGTTGGAGTTATTATTGGCCCAACCA AACACGCGACGACCCCCAAAACACGCAACACCTTACGCATCCCCATCTTC CCCCTCCGACCCACGCCTCTACTCCATCCCCCATTCGAACAACGCCTCGC GGAACAAACAGCACGCAGGAGCTCCCCACCGACGCGGCAGAGCTGCTCAA GAAGGGCGTGGACATCAACGCCTGCTCTCTCTCTCAGCTGCGGAAGATCG CGGAAGAGGCGCCGGGCTCGTCTGTGGGGGTGCGGTTCAATCCCGGCATG GGTTCCGGGGGAACGAAGAGCACCAACGTGGGGGGACTGGCTTCCTCGTT CGGTGAGTTTTGTATTTCTCATTTCATCGTCTCTCTTTTTTTTTTTGTGA CGAATTATCTTTCCTTTTATCCCTCTCGTTGTTAGTTCGTGTATTGTTTT ATTGCCTTAGGCATGTGCGGTCCATTGGTTGTTTTTGTTCAGTCTCACTG TTTTTTCGTTTATTTTGTCCCCAGGTATCTGGTACGAGTGGGTGGACGAG GTGAAGGAGATCTGCGCCGCTGGCGATCTGACGGTCTCGCGGGTGCACAC GCACATTGGGTCCGGGTCCGACCCTGCTGTGTGGCAAAAGGTATGCTATG CTTTGAAGCGAAAGGTTTGCAGCAGCAGCAAGCAGACAAAAGTGCGGTCC GGGACGGGACGCACGATGTTGTGTTTAATGTTGCTGTTATTATTGCTGTT TTTGTGAAAGCAAACAGACCACTTCATACAAGTACGCAAGAGAAGAACTG TGCGATCATATTATATACAAGTATGTCTAAACATTTTGATCGACGAAGTT TTTTGCTGCTGGAAACATCATCTCGCCGATGCGATAGATTTTTTGAGACT TGATGGCGGTCGGCATTGACTTATTATAACCTGTGTTAGTGGTGGGAGTT CAACCGAGCTCAGAGAATCGCTCCCTGCCTACCTCAGTGTGTACTTTTCG TTTGATTCATAATTATTTCACTACACTGTACTAAGAAAAGAACACGGCGG TGCAGCCATGTTTCATTCATTTGCGAGCCTCTCTCGCGAAAGCTCCGCTA CACAAAAAAATAAAAATAAAAGACAGAGAAAAGGCCGATTTTGAAAGAAA AGGGCATCAAAAGATAAAAACAGCAGAACACCCTCTAATGTCCGTCCCAA TACTAGGTACATTCAAAACGACACGTCGGCTTTTGCCGTCAAACGTAGAT ATTTCCCGTGCTTTGTACAGCATTCTGCTTTTTTCCTTCTTTACATGCAT GAAAGAAACACTGCTGCTGCTGTCCCCCATCCCCCCCCTCGCTGTTTTTT TTCTCTTTCGTATGGTAAAATAAAAACCGAAACAAACGATCATGGAATCA ACACGCAACAGGTGTCCGGCATGAGCTTGGACCTAGTGCGACAGTTCCCT ACCGTGAAGACGCTGAACTTGGGGGGCGGTTACAAGGTGGGGTTTTGTTT CGGGGTTATTCGAATCTTATACTGTATAGCGATGCAAACACAATCTTGCT GCCGTGTTGTCGTTCTGCTTTGTTGTGTGTTTGTTCTCTCCTCCTTGGCA ATGTACATCGTGAAGGTTGATCGTACGTTCCGAAGTGCATGTATGATAGG TTGTGTGCATGAGGGGCTTGCTTTTGTCCGATGCGTACAAGAGGAAGGCT ATTGAGTTGTAAAAGAGAATCCGCACACGCGAGATGTGTGTGTACCCCTC GCTTCCCCCCCCCCCCCCACCTCTTTGATATTCTGCATCCACGAGTCGTG TGAAGGATAGGCTCATGTTCATCGCACAAACCGGGCGGGGGAATGTCGGG AGAAGTAGAAGAAGGAGTTCGCCGGCCGTTGTGGTATACTTTGAAGTATT CAGTGACGAATCATAGCTTTATCTCTCGTCTGCACAGACTGGACCAATGG CAGGAGTCATCTCCGCCTCCACGGCGTTTTTCTTTTTCATTGTGTCTGAG ATTTTCTTCCATCATGAATGAAGTTGATCGGTGCAGGCGTCCGCCAACCG TATTCCATGTTTTCACTGTGTCTTCTCCTTCATTAACTAGTCATTTTCAT ATTCGTAAGTGATATCACACACACCCACAACTATACACACTAACAGGTCG GACGGATGTCGGGAGAGGTGTCAACCGACCTCCAGGCCATCGGGGCCTCG GTAATGGGCGGCTTCGAGGCCTTCGCGAAGGAGACCGGGCGGGAGCTGAA GCTGGAGATCGAACCGGGAACGTTCCTCGTCGCCAACGCGGGCAGCCTCG TGTGCACCGTGCAGGACGTGGTGAGCACCGGGAGCGAAGGCTACGAGTTT ATCAAGCTGGACGCCGGGATGACGGAGCTGCTGAGACCGTCGCTCTACGG CGCCCCGCACCCCATCATTGTTGTGCCCGCTGAGGTATGATACGCATACA TACATGTATGCGCAGCAGCATGCATATATTGTAAAATCATGCAGTATTCC CCCCTCATGTTTCATTTTCTCCTTTTTTTGGGGGGGTGGGGGGGGGGAGG GTTGATACCCAACTCTATAGGTACATTGCTGGAACTTCGTTCGCGTGATA TGCACCCTACACGTGCCCGTTTTCTGTTTTTGCTCACAACGTCTGCGTCT GTCTGTCTATCTGTCTGTCTATCTGTCGGCCGGCCGGCCGGCCCCCTGCT CCTTATTTTTCCTCCTCCCCGATTTCACCGTTGCGGCACCTGTTTTTGTG CCTCCTCCCCCCCCCCCTCCATTTTTCGGTTCAGGGAGAAGGTGGCGATG CCACGGCAGAGTATGTGGTCGTGGGGCACTGCTGCGAATCCGGGGACCTG ATGACACCCATCCCGGGGGCGGCCTCTGACATCGACCGCCGACTCCTCAA CAAGGCCGAGATCGGTGAAATTTCGTCTTTTTTCTACGTATCAGTCTTTC CATGTATCGGTTCACGCACGTTCACATGATACATCGGTTTGTTAAAAGTG ACTTGAGAGGAAAAGTGATTCAGACAGACAGACAGACAGATAGACAGACA GGTATAGTTTGGACGACTCA
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig771:125603..132872+

>mRNA_P-littoralis_Contig771.23.2 ID=mRNA_P-littoralis_Contig771.23.2|Name=mRNA_P-littoralis_Contig771.23.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1386bp|location=Sequence derived from alignment at P-littoralis_Contig771:125603..132872+ (Pylaiella littoralis U1_48)
ATGGTGTCGGAGCCGAGATCAATGGCTGTTCGGACGGTTCTGATTGCTCT
TGTGGCTAATCTAAGTGTTGAGAAATGCTGCGGATTCGTGGCTGCTCCCG
CCTCGCTGGCTCGGGGCAACTCTGGTTGGGCGAGGAATCCCTCTCCTTTT
TCTTCTGCTCCTTCTACTGCTGCTGCTGTAGGGAGGACGAGGGCCACGAT
GGTGGCCGTTGAGGTGGCCGCGGGGCAAGAACAGCTGGAGAAGCTCAAGT
TCCTGACACCCGAGACAGCCCGCGCCGCCAAAGCCGCGGTCGGCACCCCG
GCCTACGTGTACGACGCTGCGAGCTTGAAGGCCAACGCGGAGGCGTGCCT
CGCGTTCCCCAACGCCTACGGCCTGACCGTGCGCTACGCCATGAAGAGCC
TTCCCAACAAGGCGGTCCTGCAGCTCTTCCACAGCCTTGGGCTGAAGTTT
GACTGCAGCAGCGGCTGGGAGGTAGAGAGGGCCATCGCCGCGGGAGTGCC
CCCTGAGAGCCTGTGCCTGAGCACGCAGGAGCTCCCCACCGACGCGGCAG
AGCTGCTCAAGAAGGGCGTGGACATCAACGCCTGCTCTCTCTCTCAGCTG
CGGAAGATCGCGGAAGAGGCGCCGGGCTCGTCTGTGGGGGTGCGGTTCAA
TCCCGGCATGGGTTCCGGGGGAACGAAGAGCACCAACGTGGGGGGACTGG
CTTCCTCGTTCGGTATCTGGTACGAGTGGGTGGACGAGGTGAAGGAGATC
TGCGCCGCTGGCGATCTGACGGTCTCGCGGGTGCACACGCACATTGGGTC
CGGGTCCGACCCTGCTGTGTGGCAAAAGGTGTCCGGCATGAGCTTGGACC
TAGTGCGACAGTTCCCTACCGTGAAGACGCTGAACTTGGGGGGCGGTTAC
AAGGTCGGACGGATGTCGGGAGAGGTGTCAACCGACCTCCAGGCCATCGG
GGCCTCGGTAATGGGCGGCTTCGAGGCCTTCGCGAAGGAGACCGGGCGGG
AGCTGAAGCTGGAGATCGAACCGGGAACGTTCCTCGTCGCCAACGCGGGC
AGCCTCGTGTGCACCGTGCAGGACGTGGTGAGCACCGGGAGCGAAGGCTA
CGAGTTTATCAAGCTGGACGCCGGGATGACGGAGCTGCTGAGACCGTCGC
TCTACGGCGCCCCGCACCCCATCATTGTTGTGCCCGCTGAGGGAGAAGGT
GGCGATGCCACGGCAGAGTATGTGGTCGTGGGGCACTGCTGCGAATCCGG
GGACCTGATGACACCCATCCCGGGGGCGGCCTCTGACATCGACCGCCGAC
TCCTCAACAAGGCCGAGATCGGTGAAATTTCGTCTTTTTTCTACGTATCA
GTCTTTCCATGTATCGGTTCACGCACGTTCACATGA
back to top