prot_P-littoralis_Contig771.20.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig771.20.3
Unique Nameprot_P-littoralis_Contig771.20.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length320
Homology
BLAST of mRNA_P-littoralis_Contig771.20.3 vs. uniprot
Match: D7G8M3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8M3_ECTSI)

HSP 1 Score: 213 bits (542), Expect = 1.190e-64
Identity = 113/151 (74.83%), Postives = 125/151 (82.78%), Query Frame = 0
Query:   40 MSREPAGESPLGGASATGNRLVSEPAFELLFSEIIAYTGAYVSHSAASHATDLLRASEAEAK---EGQDNSNDEEDGVESDGALVKPSPASVGAGNHLLPPDQAQQMEIRIEGMGYEVGYRLVERACQRRWMGGEQLEAIKFVCKDLWSDV 187
            MSR+  GE P G A A GNRLVSEPAFELLFSEIIAYTGAYVSHSAASHATD LRASEA  +   EG+      +DG ++ G+LV+P+PASVGAG+ LLP DQAQQME RIE MGYEVGYRLVER CQRRWMGG+QLEAIKFVCKDLWSD+
Sbjct:    1 MSRDATGEVPAGSAVAAGNRLVSEPAFELLFSEIIAYTGAYVSHSAASHATDRLRASEAGVEDEGEGEKGGXXXDDGSDTGGSLVEPNPASVGAGHQLLPSDQAQQMEARIESMGYEVGYRLVERTCQRRWMGGDQLEAIKFVCKDLWSDL 151          
BLAST of mRNA_P-littoralis_Contig771.20.3 vs. uniprot
Match: A0A7S2UTW2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTW2_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 1.360e-8
Identity = 27/48 (56.25%), Postives = 36/48 (75.00%), Query Frame = 0
Query:  140 AQQMEIRIEGMGYEVGYRLVERACQRRWMGGEQLEAIKFVCKDLWSDV 187
            A+ +  R+EGMG+EVGYR VER  Q+R +  E LE IKF+CKD W++V
Sbjct:   11 AEALAHRLEGMGFEVGYRFVERVAQKRVIPSEPLEIIKFLCKDFWTEV 58          
BLAST of mRNA_P-littoralis_Contig771.20.3 vs. uniprot
Match: A0A835ZD08_9STRA (Transport protein particle component, Bet3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD08_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 5.800e-7
Identity = 23/42 (54.76%), Postives = 33/42 (78.57%), Query Frame = 0
Query:  146 RIEGMGYEVGYRLVERACQRRWMGGEQLEAIKFVCKDLWSDV 187
            R+E +G++VG RL ER CQ + + GE LEA+KF+CKD W++V
Sbjct:   67 RLESLGWDVGCRLTERLCQTKLLSGEPLEAVKFICKDFWTEV 108          
BLAST of mRNA_P-littoralis_Contig771.20.3 vs. uniprot
Match: A0A1Y1IG54_KLENI (Transport protein particle (TRAPP) component n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IG54_KLENI)

HSP 1 Score: 55.5 bits (132), Expect = 1.180e-5
Identity = 24/42 (57.14%), Postives = 32/42 (76.19%), Query Frame = 0
Query:  146 RIEGMGYEVGYRLVERACQRRWMGGEQLEAIKFVCKDLWSDV 187
            R+E +G++VG +LVERA + R    + LE IKF+CKDLWSDV
Sbjct:   38 RVEAIGFQVGQQLVERATKERPRFADHLEVIKFICKDLWSDV 79          
BLAST of mRNA_P-littoralis_Contig771.20.3 vs. uniprot
Match: A0A2D4BMC0_PYTIN (Transport protein particle component, Bet3 n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BMC0_PYTIN)

HSP 1 Score: 54.7 bits (130), Expect = 2.440e-5
Identity = 24/55 (43.64%), Postives = 37/55 (67.27%), Query Frame = 0
Query:  130 AGNHLLPPDQAQQMEIRIEGMGYEVGYRLVERACQRRWMGGEQLEAIKFVCKDLW 184
            +G+  +  ++ +++ +R+E MGY VGYR VER+ + R    E L+ IKFVCKD W
Sbjct:   42 SGDAEVAKNRKEELTMRLEAMGYXVGYRFVERSARDRPRMTEPLDVIKFVCKDFW 96          
BLAST of mRNA_P-littoralis_Contig771.20.3 vs. uniprot
Match: K3WA95_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WA95_GLOUD)

HSP 1 Score: 54.7 bits (130), Expect = 2.700e-5
Identity = 25/59 (42.37%), Postives = 39/59 (66.10%), Query Frame = 0
Query:  126 ASVGAGNHLLPPDQAQQMEIRIEGMGYEVGYRLVERACQRRWMGGEQLEAIKFVCKDLW 184
            A++ +G   L  ++ +++ I++E MGY+VGYR  ER+ + R    E L+ IKFVCKD W
Sbjct:   45 ANLESGAIELAKNKKEELTIKLEAMGYDVGYRFAERSAKDRPRMLEPLDVIKFVCKDFW 103          
BLAST of mRNA_P-littoralis_Contig771.20.3 vs. uniprot
Match: A0A7S2RK51_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RK51_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 3.160e-5
Identity = 25/60 (41.67%), Postives = 38/60 (63.33%), Query Frame = 0
Query:  129 GAGNHLLPPDQAQQMEI-RIEGMGYEVGYRLVERACQRRWMGGEQLEAIKFVCKDLWSDV 187
            GA    L PD  ++  + +I+ +G+ VG R VER  Q+R +  EQLE +KF+CKD W ++
Sbjct:    1 GASPSSLAPDAGEEWVLGKIDQLGFTVGSRFVERVGQQRALAHEQLEVMKFICKDFWHEL 60          
BLAST of mRNA_P-littoralis_Contig771.20.3 vs. uniprot
Match: A0A1X6PF38_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PF38_PORUM)

HSP 1 Score: 54.3 bits (129), Expect = 5.200e-5
Identity = 33/89 (37.08%), Postives = 44/89 (49.44%), Query Frame = 0
Query:  119 ALVKPSPASVGAGNHL---------LPPDQAQQMEIRIEGMGYEVGYRLVERACQRRWMGGEQLEAIKFVCKDLWSDVRIKNHFVFVHT 198
            A V P P++V  GN L                +   R+EG+GY+VG+RLVER    +      LEA+KFVC+D W  V  K H   + T
Sbjct:   37 AYVPPVPSAVPDGNALPXXXXXXXXXXXXXXXETRRRLEGVGYDVGHRLVERYAVEKERMDSDLEAVKFVCRDFWEGV-FKKHVDVLRT 124          
BLAST of mRNA_P-littoralis_Contig771.20.3 vs. uniprot
Match: A0A0K1ETW9_9ROSI (Trafficking protein (Fragment) n=1 Tax=Ceriops decandra TaxID=172013 RepID=A0A0K1ETW9_9ROSI)

HSP 1 Score: 51.2 bits (121), Expect = 5.270e-5
Identity = 23/42 (54.76%), Postives = 30/42 (71.43%), Query Frame = 0
Query:  146 RIEGMGYEVGYRLVERACQRRWMGGEQLEAIKFVCKDLWSDV 187
            RIE +GY+VG++L ER    R    + LEAIKF+CKD WS+V
Sbjct:   10 RIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSEV 51          
BLAST of mRNA_P-littoralis_Contig771.20.3 vs. uniprot
Match: UPI001CB89A0E (trafficking protein particle complex subunit 6B-like n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB89A0E)

HSP 1 Score: 53.1 bits (126), Expect = 6.680e-5
Identity = 22/43 (51.16%), Postives = 31/43 (72.09%), Query Frame = 0
Query:  145 IRIEGMGYEVGYRLVERACQRRWMGGEQLEAIKFVCKDLWSDV 187
            +RIE +GY+VGY+L ER    R    + LEAIKF+CK+ WS++
Sbjct:   35 LRIEAIGYQVGYQLAERYTMERPRFNDHLEAIKFICKEFWSEL 77          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig771.20.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D7G8M3_ECTSI1.190e-6474.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2UTW2_9STRA1.360e-856.25Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A835ZD08_9STRA5.800e-754.76Transport protein particle component, Bet3 n=1 Tax... [more]
A0A1Y1IG54_KLENI1.180e-557.14Transport protein particle (TRAPP) component n=1 T... [more]
A0A2D4BMC0_PYTIN2.440e-543.64Transport protein particle component, Bet3 n=2 Tax... [more]
K3WA95_GLOUD2.700e-542.37Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A7S2RK51_9STRA3.160e-541.67Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1X6PF38_PORUM5.200e-537.08Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A0K1ETW9_9ROSI5.270e-554.76Trafficking protein (Fragment) n=1 Tax=Ceriops dec... [more]
UPI001CB89A0E6.680e-551.16trafficking protein particle complex subunit 6B-li... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.1380.20Trafficking protein particle complex subunit 3coord: 60..191
e-value: 8.7E-14
score: 53.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..135
IPR007194Transport protein particle (TRAPP) componentPFAMPF04051TRAPPcoord: 66..187
e-value: 3.1E-10
score: 39.9
IPR024096NO signalling/Golgi transport ligand-binding domain superfamilySUPERFAMILY111126Ligand-binding domain in the NO signalling and Golgi transportcoord: 61..185

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig771contigP-littoralis_Contig771:119090..125496 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig771.20.3mRNA_P-littoralis_Contig771.20.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig771 119090..125496 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig771.20.3 ID=prot_P-littoralis_Contig771.20.3|Name=mRNA_P-littoralis_Contig771.20.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=320bp
ATVRCGVKTGQSQHSSVGAALCRSTRSEAQAVARQEITIMSREPAGESPL
GGASATGNRLVSEPAFELLFSEIIAYTGAYVSHSAASHATDLLRASEAEA
KEGQDNSNDEEDGVESDGALVKPSPASVGAGNHLLPPDQAQQMEIRIEGM
GYEVGYRLVERACQRRWMGGEQLEAIKFVCKDLWSDVRIKNHFVFVHTRR
CSSLLLYLLNVTDSSEIGDLRCEAIEGLQGLVVRCELREQQFCSLLSRTF
YDAASAVRSGLVISPINVFTKHFELQYFVYSYDSFLKFFDVAFGGITLYA
SCIASVFLFVVSFFFLRRWV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007194TRAPP_component
IPR024096NO_sig/Golgi_transp_ligand-bd