mRNA_P-littoralis_Contig771.18.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig771.18.2 vs. uniprot
Match: D7FHE6_ECTSI (UPF0029 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHE6_ECTSI) HSP 1 Score: 208 bits (529), Expect = 4.320e-60 Identity = 101/124 (81.45%), Postives = 107/124 (86.29%), Query Frame = 3
Query: 462 KIVTICGEAETEETIKKSRFIGRCGPAATFEDAKALLGRVSQEHPKARHSCWAWRGLGDDHRFSDDGEPGGTAGLPILGGIESEGISEVAVVVTRYSGGIKLGTGGLCRAYGGASRLCLQAAER 833
+IVT+CGE+ETEETIKKSRFIGRCGPAATFE+ KALLGRV +EHPKARHSCWAWRGLGDDHRFSDDGEPGGTAG PILGGIESEG+SE LGTGGLCRAYGGASR CLQAAER
Sbjct: 23 QIVTVCGESETEETIKKSRFIGRCGPAATFEEGKALLGRVLKEHPKARHSCWAWRGLGDDHRFSDDGEPGGTAGQPILGGIESEGVSE-------------LGTGGLCRAYGGASRQCLQAAER 133
BLAST of mRNA_P-littoralis_Contig771.18.2 vs. uniprot
Match: W7TTS7_9STRA (Thymidylate synthase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TTS7_9STRA) HSP 1 Score: 181 bits (458), Expect = 9.550e-49 Identity = 95/200 (47.50%), Postives = 133/200 (66.50%), Query Frame = 3
Query: 447 ASAPGKIVTICGEAETEETIKKSRFIGRCGPAATFEDAKALLGRVSQEHPKARHSCWAWRGLGDDHRFSDDGEPGGTAGLPILGGIESEGISEVAVVVTRYSGGIKLGTGGLCRAYGGASRLCLQAAERETRTPVLGLTVTAPVESVGSVYHAVSDCRRLSEEFTADGSVILRVKVEVGQVDEVRRRISDATKGAAEIVE 1046
A+ T+ G AE EE IKKSRF+ R PA++F +A+ L V KA H+CWAWRG G++ R SDDGEPGGTAG PIL IESE + +V VVVTRY GGIKLG GGL RAYGG +R CL+ AE T P + + + AP+ G+V+ ++ ++ E++TA+ +I+ VKV+ +D +R+++ DAT+G+ + E
Sbjct: 72 ATKSASFKTLAGPAEYEEIIKKSRFLSRATPASSFAEAQTFLRDVGDL--KASHNCWAWRGHGEE-RSSDDGEPGGTAGRPILSAIESEDLVDVMVVVTRYFGGIKLGAGGLVRAYGGVARTCLRNAETLTHIPKVLVRLRAPLSMSGAVFQTINRTDKIKEDYTAE-EIIVDVKVDAALIDNLRQQLQDATRGSGSLEE 267
BLAST of mRNA_P-littoralis_Contig771.18.2 vs. uniprot
Match: A0A7S2X6S7_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2X6S7_9EUKA) HSP 1 Score: 157 bits (398), Expect = 6.710e-40 Identity = 83/192 (43.23%), Postives = 115/192 (59.90%), Query Frame = 3
Query: 459 GKIVTICGEAETEETIKKSRFIGRCGPAATFEDAKALLGRVSQEHPKARHSCWAWRGLGDDHRFSDDGEPGGTAGLPILGGIESEGISEVAVVVTRYSGGIKLGTGGLCRAYGGASRLCLQAAERETRTPVLGLTVTAPVESVGSVYHAVSDCRRLSEEFTADGSVILRVKVEVGQVDEVRRRISDATKGAA 1034
G + T+ EE +KKSRFI P + ED L V + A H+CWAW+ +G D+RFSDDGEPGGTAG PIL IE G+ V VVVTR+ GGIKLG GGLCRAYGGA+ CL+ A+R P++ L V+ + +G +Y A+S + + ++ DGSV++ ++ + +I AT+ A
Sbjct: 93 GDVYTLKDRHTEEEVVKKSRFIAFATPLTSPEDFDGFLASVRDD--TASHNCWAWK-VGSDYRFSDDGEPGGTAGRPILQAIEYSGLDGVGVVVTRFFGGIKLGAGGLCRAYGGAAASCLRQAQRVKVVPMVELRVSCAADLIGIIYRALSAYQGVHTDYCEDGSVVISARLPSADASSMVEQIRGATQARA 281
BLAST of mRNA_P-littoralis_Contig771.18.2 vs. uniprot
Match: UPI000369F5B1 (IMPACT family protein n=1 Tax=Calidithermus timidus TaxID=307124 RepID=UPI000369F5B1) HSP 1 Score: 154 bits (389), Expect = 7.820e-40 Identity = 85/191 (44.50%), Postives = 122/191 (63.87%), Query Frame = 3
Query: 465 IVTICGEAETEETIKKSRFIGRCGPAATFEDAKALLGRVSQEHPKARHSCWAWRGLGDDHRFSDDGEPGGTAGLPILGGIESEGISEVAVVVTRYSGGIKLGTGGLCRAYGGASRLCLQAAERETRTPVLGLTVTAPVESVGSVYHAVSDCRRLSEEFTA--DGSVILRVKVEVGQVDEVRRRISDATKGA 1031
++T+ E E+ ++KSRFI R PA T E+A A L RV + P+A H+CWA++ +G +RF DDGEPGGTAG PIL I+++G+ V VVVTRY GG+KLG GGL RAYGG + CL+ A + P L L + AP E G VY A+ + +L+ EF + ++L +E +++ R + DA++GA
Sbjct: 1 MITLAAPCELEQLVQKSRFIARAAPATTPEEALAFLERVRE--PEATHNCWAYQ-IGLLYRFCDDGEPGGTAGQPILRAIQAQGLDRVMVVVTRYFGGVKLGAGGLARAYGGVAAECLRQAPKREIVPRLRLRLEAPFEMAGQVY-ALLERWKLAREFEGYTEAGLVLEFVLEEARLEAFRVALRDASRGA 187
BLAST of mRNA_P-littoralis_Contig771.18.2 vs. uniprot
Match: UPI00166A7E21 (IMPACT family protein n=1 Tax=Deinococcus aerophilus TaxID=522488 RepID=UPI00166A7E21) HSP 1 Score: 154 bits (389), Expect = 9.910e-40 Identity = 86/200 (43.00%), Postives = 113/200 (56.50%), Query Frame = 3
Query: 447 ASAPGKIVTICGEAETEETIKKSRFIGRCGPAATFEDAKALLGRVSQEHPKARHSCWAWRGLGDDHRFSDDGEPGGTAGLPILGGIESEGISEVAVVVTRYSGGIKLGTGGLCRAYGGASRLCLQAAERETRTPVLGLTVTAPVESVGSVYHAVS--DCRRLSEEFTADGSVILRVKVEVGQVDEVRRRISDATKGAAEI 1040
A P T+ GE + ++ S F+ A T E A A L V +P A H CWA+R +G +RF+DDGEPGGTAG P+L IE +G+ V VV RY GG+KLGTGGL RAYGGA+ CL+ A + P L+V P E +G++YH + D R E +TA G + L V V G D + D T+G AE+
Sbjct: 3 AGLPDPFTTLAGEHRHSDVVENSEFLAFAARADTPEQALAFLSEVRARYPDATHHCWAYR-IGALYRFNDDGEPGGTAGAPMLRAIEGQGVDHVMAVVVRYYGGVKLGTGGLVRAYGGAAAECLRTAPKLEVRPRQTLSVAVPFEHLGALYHLLDTFDTVRGEEAYTASG-ITLAVAVYPGDADAFAAALRDGTRGEAEV 200
BLAST of mRNA_P-littoralis_Contig771.18.2 vs. uniprot
Match: A0A3E1K5H2_9GAMM (YigZ family protein n=1 Tax=Wenzhouxiangella sediminis TaxID=1792836 RepID=A0A3E1K5H2_9GAMM) HSP 1 Score: 153 bits (387), Expect = 1.330e-39 Identity = 88/191 (46.07%), Postives = 110/191 (57.59%), Query Frame = 3
Query: 474 ICGEAETEETIKKSRFIGRCGPAATFEDAKALLGRVSQEHPKARHSCWAWRGLGDDHRFSDDGEPGGTAGLPILGGIESEGISEVAVVVTRYSGGIKLGTGGLCRAYGGASRLCLQAAERETRTPVLGLTVTAPVESVGSVYHAVSDC--RRLSEEFTADGSVILRVKVEVGQVDEVRRRISDATKGAAEI 1040
+ G E IKKSRFI P + A+A + RVS P A H+CWAW +GD++RF DDGEPGGTAG PIL IES+G VVVTR+ GG KLGTGGL RAYGG + L+ AE P + L + P E VG+ +HA+S+ +LSE++ DG V L V V I DA KG +
Sbjct: 5 LIGPVTHEAEIKKSRFIAHAAPVDDEDAARAFIERVSD--PTANHNCWAWL-IGDNYRFDDDGEPGGTAGRPILQAIESQGYDRTVVVVTRFFGGTKLGTGGLARAYGGTANEALRTAESTPIVPKVRLRLNLPFEFVGAAHHALSEFGGEKLSEDYDTDG-VTLIVTVPAASRQAFSEHIRDAAKGQGRV 191
BLAST of mRNA_P-littoralis_Contig771.18.2 vs. uniprot
Match: A0A1G4A875_9GAMM (IMPACT family protein n=2 Tax=Xanthomonadales TaxID=135614 RepID=A0A1G4A875_9GAMM) HSP 1 Score: 153 bits (387), Expect = 1.740e-39 Identity = 86/203 (42.36%), Postives = 123/203 (60.59%), Query Frame = 3
Query: 471 TICGEAETEETIKKSRFIGRCGPAATFEDAKALLGRVSQEHPKARHSCWAWRGLGDDHRFSDDGEPGGTAGLPILGGIESEGISEVAVVVTRYSGGIKLGTGGLCRAYGGASRLCLQAAERETRTPVLGLTVTAPVESVGSVYHAVS--DCRRLSEEFTADGSVILRVKVEVGQVDEVRRRISDATKGAAEIVEEE*APSPPA 1073
T+ A +K S F+ + P + + A A V P A H+CWA+R +G ++RF+DDGEPGGTAG PIL IE +G+ VAVVVTR+ GGIKLG GGL RAYGGA+ CL+ A R+ V + V P E G+V+ A++ D +L E F A G + +++ V +VD + ++ DAT+ A + E+ AP+PP+
Sbjct: 5 TLATRASHSIDVKHSHFLAQAAPVHSPDAALAFFAEVGD--PAATHNCWAYR-IGCEYRFNDDGEPGGTAGRPILAAIEGQGLDRVAVVVTRWYGGIKLGAGGLVRAYGGAAAECLRTAARQPLVVVREVHVAYPFEDTGAVHAALAAHDAEKLDERFDAGGGHV-HLRLPVDRVDALVAQLRDATRDRARVRREDDAPTPPS 203
BLAST of mRNA_P-littoralis_Contig771.18.2 vs. uniprot
Match: D7BIB8_MEISD (UPF0029 domain-containing protein n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) TaxID=526227 RepID=D7BIB8_MEISD) HSP 1 Score: 153 bits (386), Expect = 1.890e-39 Identity = 86/189 (45.50%), Postives = 120/189 (63.49%), Query Frame = 3
Query: 468 VTICGEAETEETIKKSRFIGRCGPAATFEDAKALLGRVSQEHPKARHSCWAWRGLGDDHRFSDDGEPGGTAGLPILGGIESEGISEVAVVVTRYSGGIKLGTGGLCRAYGGASRLCLQAAERETRTPVLGLTVTAPVESVGSVYHAVSDCR--RLSEEFTADGSVILRVKVEVGQVDEVRRRISDATKG 1028
+T+ E+ I+KSRFI + P + E A A L VS+ P A H+CWA++ +G +RFSDDGEPGGTAG PIL I+++G+ +V VVVTRY GGIKLG GGL RAYGG + CL+AA + P++ L + AP E G VY + + R SE ++ G V+ + +E +++E RR I D T+G
Sbjct: 3 ITLAEPHTLEQHIQKSRFIAKAAPVESPESALAFLRGVSE--PAASHNCWAYQ-IGLHYRFSDDGEPGGTAGQPILRAIQAQGLDQVMVVVTRYFGGIKLGAGGLVRAYGGIAAQCLRAAPKREIVPLVRLQLEAPFELAGQVYGLLERWKLARASETYSQAGLVV-EIVIEEARLEEFRRAIVDGTRG 187
BLAST of mRNA_P-littoralis_Contig771.18.2 vs. uniprot
Match: UPI001783E404 (IMPACT family protein n=4 Tax=Luteimonas TaxID=83614 RepID=UPI001783E404) HSP 1 Score: 153 bits (386), Expect = 1.950e-39 Identity = 85/190 (44.74%), Postives = 115/190 (60.53%), Query Frame = 3
Query: 471 TICGEAETEETIKKSRFIGRCGPAATFEDAKALLGRVSQEHPKARHSCWAWRGLGDDHRFSDDGEPGGTAGLPILGGIESEGISEVAVVVTRYSGGIKLGTGGLCRAYGGASRLCLQAAERETRTPVLGLTVTAPVESVGSVYHAVS--DCRRLSEEFTADGSVILRVKVEVGQVDEVRRRISDATKGAA 1034
T+ A E +K SRF+ P A + A A + VS P+A H+CWAWR +GD +R SDDGEP GTAG PIL I+ +G+ VAVVVTR+ GGIKLG GGL RAYGG + CL+ AER + + V P + +V+ A+ D +LSE+F ADG V R+++ G + + R+ DAT+ A
Sbjct: 5 TLAAAATHELVVKHSRFLASAAPVADADAAAAFIASVSV--PEATHNCWAWR-IGDGYRSSDDGEPAGTAGRPILAAIDGQGLDGVAVVVTRWYGGIKLGAGGLVRAYGGTAAECLRTAERREVVQMAEVDVECPFADIAAVHAALPAFDAEKLSEDFAADG-VRFRLRLPAGHIAALAARLRDATRDRA 190
BLAST of mRNA_P-littoralis_Contig771.18.2 vs. uniprot
Match: A0A1T1BI42_9DEIO (IMPACT family protein n=12 Tax=Deinococcus TaxID=1298 RepID=A0A1T1BI42_9DEIO) HSP 1 Score: 152 bits (385), Expect = 3.420e-39 Identity = 88/199 (44.22%), Postives = 118/199 (59.30%), Query Frame = 3
Query: 456 PGKIVTICGEAETEETIKKSRFIGRCGPAATFEDAKALLGRVSQEHPKARHSCWAWRGLGDDHRFSDDGEPGGTAGLPILGGIESEGISEVAVVVTRYSGGIKLGTGGLCRAYGGASRLCLQAAERETRTPVLGLTVTAPVESVGSVYHAVS--DCRRLSEEFTADGSVILRVKVEVGQVDEVRRRISDATKGAAEIVE 1046
P VT+ G ++ I+ S F+ A + E+A A LG + + +P A H CWA+R +G +RF DDGEPGGTAG PIL IE +G+ V VVV R+ GG+KLGTGGL RAYGG + CL+ A R T L V+ P E +G +YH + D R E ++ G V LRV+V V + DA++GAAE+VE
Sbjct: 2 PAPFVTLAGPHRSDAVIENSEFLAFADRADSPEEALAQLGALRERYPDATHHCWAYR-IGGAYRFGDDGEPGGTAGAPILRAIEGQGVDRVMVVVVRFYGGVKLGTGGLVRAYGGGAAECLRTAARVTVRARRALAVSVPFEFLGGLYHLLGSLDVVRGEEAYSGAG-VSLRVEVFPEDVAGFVVALRDASRGAAEVVE 198 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig771.18.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig771.18.2 >prot_P-littoralis_Contig771.18.2 ID=prot_P-littoralis_Contig771.18.2|Name=mRNA_P-littoralis_Contig771.18.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=288bp MASSLHRRAAINLMFCASVLGAVVVRESPLQLKSLLFHSRISTDTFVRRRback to top mRNA from alignment at P-littoralis_Contig771:104266..115433+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig771.18.2 ID=mRNA_P-littoralis_Contig771.18.2|Name=mRNA_P-littoralis_Contig771.18.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=11168bp|location=Sequence derived from alignment at P-littoralis_Contig771:104266..115433+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig771:104266..115433+ >mRNA_P-littoralis_Contig771.18.2 ID=mRNA_P-littoralis_Contig771.18.2|Name=mRNA_P-littoralis_Contig771.18.2|organism=Pylaiella littoralis U1_48|type=CDS|length=864bp|location=Sequence derived from alignment at P-littoralis_Contig771:104266..115433+ (Pylaiella littoralis U1_48)back to top |