mRNA_P-littoralis_Contig771.2.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig771.2.1
Unique NamemRNA_P-littoralis_Contig771.2.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig771.2.1 vs. uniprot
Match: A0A6P4ZST3_BRABE (uncharacterized protein LOC109481748 n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4ZST3_BRABE)

HSP 1 Score: 159 bits (401), Expect = 1.730e-38
Identity = 117/384 (30.47%), Postives = 190/384 (49.48%), Query Frame = 1
Query:  493 CDRHRAALLEACTKQQEQDTKIRDLQDRVQALEEELTTLGVGLEKKQGDLKACAPWRASRGIDSSILQGLCEDSCRSLC-GLSSAESLDDLWRFLDYRGRAQSMNFY----NADKEQASGLKDDGRRIERRSK-KLGGTNGLFFALFVMRTSTSLRVASTLFDVSESTGGRAFTAWLDLLGGCSRALVRLPDVNSVVASAPPNYRRRGLSSVAVVLDGTEVWVDKVWQTDAQHALWSPYKKTYTAKLLIGVTPAGAICYVSDAYAGRISDVELVKASGIIDDLERGGFGGKGMHVMADRGFNAMAPILINIGMHYVAPPSKRRGEDQFTEEDAGITRDVANLRIHVERAIGAIKQWRILDTKFDSQQMDNIGPIALVCAALVNL 1626
            CD         CT++Q    KI  L+ RV+ LE+E+T+L     K  G        ++S          L  D+  + C GL S ++ +D++R+L+    AQ + ++    ++ K +    K +G   +R SK KL         L  +R   ++   + LF +  S+  +  + W+  L G  + L+  P  +++  + P  ++ +  S +  ++D TE+++++    + Q A WS YKK  T K+L+G+TP G I ++S AY GR SDV + + SG +D +E          +MADRGF     +L+      + P ++  G+ Q        T+ VANLRIHVERAI  +K +RILD  F    +     I  VCAALVNL
Sbjct:  158 CDCREGCDCPGCTQKQ---MKIDSLEHRVEELEQEITSLKTQQVKSGG--------KSSGKKKVFTADTLKTDNDINQCTGLRSKQAFNDMYRYLE--PHAQKLTYWKSTESSPKTKRPTTKGNGTPRKRGSKRKLSLREEFLLTLMRLRLGLTINFLAILFGLVPSSCSQIVSTWVRFLSGTLQPLIVWPSRHAISTTLPTQFKNK-CSRIRCIMDCTEIFIERPRNLEMQAATWSDYKKHNTMKVLVGITPNGHISFLSKAYGGRASDVSITRKSGFLDLVEPNDV------IMADRGFPIQEDLLLRHATLQIPPAAQ--GKRQMARNKVKKTKTVANLRIHVERAINRLKDFRILDGTFPISLLPAADDIIKVCAALVNL 519          
BLAST of mRNA_P-littoralis_Contig771.2.1 vs. uniprot
Match: A0A6J8DR39_MYTCO (Uncharacterized protein n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8DR39_MYTCO)

HSP 1 Score: 141 bits (356), Expect = 1.360e-33
Identity = 90/283 (31.80%), Postives = 144/283 (50.88%), Query Frame = 1
Query:  778 YRGRAQSMNFYNADKEQASGLKDDGRRIERRSKKLGGTNGLFFALFVMRTSTSLRVASTLFDVSESTGGRAFTAWLDLLGGCSRALVRLPDVNSVVASAPPNYRRRGLSSVAVVLDGTEVWVDKVWQTDAQHALWSPYKKTYTAKLLIGVTPAGAICYVSDAYAGRISDVELVKASGIIDDLERGGFGGKGMHVMADRGFNAMAPILINIGMHYVAPPSKRRGEDQFTEEDAGITRDVANLRIHVERAIGAIKQWRILDTKFDSQQMDNIGPIALVCAALVNL 1626
            Y G      FY   +   S  K        R +KL G +  F  L  +R     +  +  F+VS ST  + F  W+DL+      LV  PD  +V  + P +++RR   +  V++D TE++ +       +  ++S YK   T K+LIG++P G I +VSD ++G ISD ++ K+SG+ID  E G        +M D+GF  ++ +    G++ + PP+K+ G+   T+ +   TR +ANLRIHVERA+  IK +RI+         + +  I  +  AL NL
Sbjct:   81 YTGLPNKPTFYLLYERIMSNRKTVEPETGGRPQKLRGVDEFFMVLMRLRLGLLTQDVARRFNVSVSTCSKIFNKWIDLMYEHLNFLVAWPDRETVKCNMPDSFKRR-YPNCRVIVDCTEIFTETPQSLSNKGRMYSDYKSHMTWKVLIGISPNGVITHVSDLWSGSISDKQITKSSGLIDKCEPGDA------IMGDKGF-LISDMCTPKGIYLIVPPTKKNGK--LTKHEVEKTRRIANLRIHVERAMERIKNFRIIQGVMPISMSEKVSKIVFIVCALCNL 353          
BLAST of mRNA_P-littoralis_Contig771.2.1 vs. uniprot
Match: A0A131XS54_IXORI (Putative isl2eu-1 adi n=1 Tax=Ixodes ricinus TaxID=34613 RepID=A0A131XS54_IXORI)

HSP 1 Score: 137 bits (344), Expect = 3.100e-33
Identity = 83/222 (37.39%), Postives = 111/222 (50.00%), Query Frame = 1
Query:  958 FDVSESTGGRAFTAWLDLLGGCSRALVRLPDVNSVVASAPPNYRRRGLSSVAVVLDGTEVWVDKVWQTDAQHALWSPYKKTYTAKLLIGVTPAGAICYVSDAYAGRISDVELVKASGIIDDLERGGFGGKGMHVMADRGFNAMAPILINIGMHYVAPPSKRRGEDQFTEEDAGITRDVANLRIHVERAIGAIKQWRILDTKFDSQQMDNIGPIALVCAALVN 1623
            F VSEST  R F  WL +L    R + RLP ++ V  + P  +R        ++LD TEV + K    +AQ   +S YK   T K L+G+TP   I +VSD + G  SD  +V   G++D LE G        VM D+GF      L+ +G+    PP +  GE Q + ED   TR VA  R+HVERAI  IK++ + DT       D    I   CA L N
Sbjct:   10 FGVSESTLSRTFARWLFMLNSVLRDITRLPQLHEVQRNMPECFRE--FPDTRIILDSTEVRIQKPSALEAQRKTFSSYKHANTMKCLVGITPDCLIAFVSDLFGGSTSDRAIVDRCGVLDLLESGDA------VMVDKGFKVQD--LLPVGVKLYIPPFRIAGEKQMSREDVVCTRKVAAARVHVERAIRRIKEFHVFDTPLPLNMADIADEIFATCALLSN 221          
BLAST of mRNA_P-littoralis_Contig771.2.1 vs. uniprot
Match: A0A147BIZ4_IXORI (Putative isl2eu-1 adi (Fragment) n=1 Tax=Ixodes ricinus TaxID=34613 RepID=A0A147BIZ4_IXORI)

HSP 1 Score: 139 bits (351), Expect = 3.980e-33
Identity = 88/242 (36.36%), Postives = 119/242 (49.17%), Query Frame = 1
Query:  898 LFFALFVMRTSTSLRVASTLFDVSESTGGRAFTAWLDLLGGCSRALVRLPDVNSVVASAPPNYRRRGLSSVAVVLDGTEVWVDKVWQTDAQHALWSPYKKTYTAKLLIGVTPAGAICYVSDAYAGRISDVELVKASGIIDDLERGGFGGKGMHVMADRGFNAMAPILINIGMHYVAPPSKRRGEDQFTEEDAGITRDVANLRIHVERAIGAIKQWRILDTKFDSQQMDNIGPIALVCAALVN 1623
            LF  L  +RT+   +  +  F VSEST  R F  WL +L    R + RLP ++ V  +    +R        +VLD TEV + K    +AQ   +S YK   T K L+G+TP   I +VSD + G  SD  +V   G++D LE G        VM D+GF      L+ +G+    PP +  GE Q + ED   TR VA  R+HVERAI  IK++ + DT       D    I   CA L N
Sbjct:   92 LFMVLVRLRTAMPCKEIARNFGVSESTLSRTFARWLFMLNSVLRDITRLPQLHEVQRNMLECFRE--FPDTRIVLDSTEVRIQKPSALEAQRKTFSSYKHANTMKCLVGITPDCLIAFVSDLFGGSTSDRAIVDRCGVLDLLESGDA------VMVDKGFKVQD--LLPVGVKLYIPPFRIAGEKQMSREDVVCTRKVAAARVHVERAIRRIKEFHVFDTPLPLNMADIADEIFATCALLSN 323          
BLAST of mRNA_P-littoralis_Contig771.2.1 vs. uniprot
Match: A0A6J8DRP4_MYTCO (THAP-type domain-containing protein n=2 Tax=Mytilus TaxID=6548 RepID=A0A6J8DRP4_MYTCO)

HSP 1 Score: 141 bits (356), Expect = 1.430e-32
Identity = 90/283 (31.80%), Postives = 144/283 (50.88%), Query Frame = 1
Query:  778 YRGRAQSMNFYNADKEQASGLKDDGRRIERRSKKLGGTNGLFFALFVMRTSTSLRVASTLFDVSESTGGRAFTAWLDLLGGCSRALVRLPDVNSVVASAPPNYRRRGLSSVAVVLDGTEVWVDKVWQTDAQHALWSPYKKTYTAKLLIGVTPAGAICYVSDAYAGRISDVELVKASGIIDDLERGGFGGKGMHVMADRGFNAMAPILINIGMHYVAPPSKRRGEDQFTEEDAGITRDVANLRIHVERAIGAIKQWRILDTKFDSQQMDNIGPIALVCAALVNL 1626
            Y G      FY   +   S  K        R +KL G +  F  L  +R     +  +  F+VS ST  + F  W+DL+      LV  PD  +V  + P +++RR   +  V++D TE++ +       +  ++S YK   T K+LIG++P G I +VSD ++G ISD ++ K+SG+ID  E G        +M D+GF  ++ +    G++ + PP+K+ G+   T+ +   TR +ANLRIHVERA+  IK +RI+         + +  I  +  AL NL
Sbjct:  220 YTGLPNKPTFYLLYEHIMSNRKTVDPETGGRPQKLRGVDEFFMVLMRLRLGLLTQDLARRFNVSVSTCSKIFNKWIDLMYEHLNFLVAWPDRETVKCNMPDSFKRR-YPNCRVIVDCTEIFTETPQSLSNKGRMYSDYKSHMTWKVLIGISPNGVITHVSDLWSGSISDKQITKSSGLIDKCEPGDA------IMGDKGF-LISDMCTPKGIYLIVPPTKKNGK--LTKHEVEKTRRIANLRIHVERAMERIKNFRIIQGVMPISMSEKVSKIVFIVCALCNL 492          
BLAST of mRNA_P-littoralis_Contig771.2.1 vs. uniprot
Match: A0A6P7W3P5_IXOSC (uncharacterized protein LOC115330279 isoform X1 n=8 Tax=Ixodes scapularis TaxID=6945 RepID=A0A6P7W3P5_IXOSC)

HSP 1 Score: 140 bits (352), Expect = 3.390e-32
Identity = 96/306 (31.37%), Postives = 148/306 (48.37%), Query Frame = 1
Query:  712 SCRSLCGLSSAESLDDLWRFLDYRGRAQSMNFYNADKEQASGLKDDGRRIERRSKKLGGTNGLFFALFVMRTSTSLRVASTLFDVSESTGGRAFTAWLDLLGGCSRALVRLPDVNSVVASAPPNYRRRGLSSVAVVLDGTEVWVDKVWQTDAQHALWSPYKKTYTAKLLIGVTPAGAICYVSDAYAGRISDVELVKASGIIDDLERGGFGGKGMHVMADRGF--NAMAPILINIGMHYVAPPSKRRGEDQFTEEDAGITRDVANLRIHVERAIGAIKQWRILDTKFDSQQMDNIGPIALVCAALVN 1623
            +C    GL       +L+ FL+ R  A  M ++  +++ A   KD       R++++   +  F  L  +RT  + +  +  F++SE    + F  W+  L    R L++ P V  +  + P  + +   S+   VLD TEV + K     AQ   +SPYK   T K ++G TP G IC+VS  + G +SD  +V+ SG++D LE G        +M D+GF  N++ P     G+    P  ++  E Q  EED   TR VA+ R+ +ERAIG IKQ+  LD  F    +D       VC  L N
Sbjct:  180 NCLYYTGLPEFSVFQNLFNFLELR--AAKMTYWLGNRKTAGETKD-------RTREMSLIDEFFMVLVRLRTGMAGKELARNFNISEGQVSKVFVTWIKFLQRQLRVLLQFPTVAEIQPNLPNAFHK--FSNTRAVLDRTEVRIQKPSSLLAQRQTFSPYKHYNTYKAVVGCTPEGYICHVSQLWGGTVSDRMIVEESGLVDQLESGDA------IMVDKGFKFNSLPP-----GVQVHIPCFRQPNEPQMPEEDVAHTRRVASARVVIERAIGRIKQFHFLDRPFPISMIDIADEAFQVCCFLSN 463          
BLAST of mRNA_P-littoralis_Contig771.2.1 vs. uniprot
Match: A0A8B6F160_MYTGA (Uncharacterized protein n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6F160_MYTGA)

HSP 1 Score: 140 bits (353), Expect = 3.420e-32
Identity = 88/283 (31.10%), Postives = 146/283 (51.59%), Query Frame = 1
Query:  778 YRGRAQSMNFYNADKEQASGLKDDGRRIERRSKKLGGTNGLFFALFVMRTSTSLRVASTLFDVSESTGGRAFTAWLDLLGGCSRALVRLPDVNSVVASAPPNYRRRGLSSVAVVLDGTEVWVDKVWQTDAQHALWSPYKKTYTAKLLIGVTPAGAICYVSDAYAGRISDVELVKASGIIDDLERGGFGGKGMHVMADRGFNAMAPILINIGMHYVAPPSKRRGEDQFTEEDAGITRDVANLRIHVERAIGAIKQWRILDTKFDSQQMDNIGPIALVCAALVNL 1626
            Y G      FY   +   S +K        R +KL G + LF  L  +R     +  +  F++S ST  + F  W+DL+      LV  PD  +V  + P +++RR   +  V++D TE++ +       +  ++S YK   T K+LIG++P G I +VSD ++G ISD ++ K+SG+I+  + G        +M D+GF  ++ +    G++ + PP+K+ G+   T+ +   TR +ANLRIHVERA+  IK +RI+         + +  I  +  AL NL
Sbjct:  216 YTGLPNKPTFYLLYEHIMSNIKIVEPETGGRPQKLRGVDELFMVLMRLRLGLLTQDLARRFNISVSTCSKIFNKWIDLMYEHLHFLVAWPDRETVKCNMPDSFKRR-YPNCRVIIDCTEIFTETPQSLSNKGRMYSDYKSHMTWKVLIGISPNGVITHVSDLWSGSISDKQITKSSGLINKCDPGDA------IMGDKGF-LISDMCTPKGIYLIVPPTKKNGK--LTKHEVEKTRRIANLRIHVERAMERIKNFRIIQGVMPISMSEKVSKIVFIVCALCNL 488          
BLAST of mRNA_P-littoralis_Contig771.2.1 vs. uniprot
Match: UPI001F5FA577 (uncharacterized protein LOC101234787 n=1 Tax=Hydra vulgaris TaxID=6087 RepID=UPI001F5FA577)

HSP 1 Score: 141 bits (355), Expect = 3.660e-32
Identity = 99/306 (32.35%), Postives = 149/306 (48.69%), Query Frame = 1
Query:  730 GLSSAESLDDLWRFLDYRGRAQSMNFYNADKEQASGLKDDGRRIERRSKKLGGTNGLFFALFVMRTSTSLRVASTLFDVSESTGGRAFTAWLDLLGGC-SRALVRLPDVNSVVASAPPNYRRRGLSSVAVVLDGTEVWVDKVWQTDAQHALWSPYKKTYTAKLLIGVTPAGAICYVSDAYAGRISDVELVKASGIIDDLERGGFGGKGMHVMADRGFNAMAPILINIGMHYVAPPSKRRGEDQFTEEDAGITRDVANLRIHVERAIGAIKQWRILDTKFDSQQMDNIGPIALVCAALVNLTRKPFA 1644
            GLS+ +  ++L  FL  +    ++ +++  K+  +          ++ KKL   +     L  +R     +  +  F +S +   R FT W+ +L     +ALV      S+  + PP + + G     V+LD  EV++++    D Q + WS YK   T K LIGV+P G I ++S  Y GR SD  + + SGI + LER         VMADRGF     +++N     V PP  R  + Q T ++   T+ VANLRIHVERAI  IK +RIL+       + +   I L C AL NL  K  A
Sbjct:  248 GLSTIKLFENL--FLLIKPYLPNLVYWSGPKKFTNSKNQKKYASMKKFKKLSQRDEFLLVLMRLRLGLLNQDLADRFGISPALCSRTFTTWIKMLSQVLGQALVVWLPRESIRNNLPPVFVKAGYQKCRVILDCAEVFIERSKSLDKQSSTWSEYKHHNTFKFLIGVSPTGYITFLSSCYGGRASDRFITRDSGIYNLLERDD------EVMADRGFQIQEDLILNF-CTLVVPPGARL-KSQLTTKEVQKTKHVANLRIHVERAINRIKTYRILNGSMSISMLQHADDILLTCGALCNLKPKLIA 543          
BLAST of mRNA_P-littoralis_Contig771.2.1 vs. uniprot
Match: UPI00077ACDDF (uncharacterized protein LOC107345859 n=2 Tax=Acropora TaxID=6127 RepID=UPI00077ACDDF)

HSP 1 Score: 133 bits (334), Expect = 8.420e-32
Identity = 76/223 (34.08%), Postives = 120/223 (53.81%), Query Frame = 1
Query:  958 FDVSESTGGRAFTAWLDLLGGCSRALVRLPDVNSVVASAPPNYRRRGLSSVAVVLDGTEVWVDKVWQTDAQHALWSPYKKTYTAKLLIGVTPAGAICYVSDAYAGRISDVELVKASGIIDDLERGGFGGKGMHVMADRGFNAMAPILINIGMHYVAPPSKRRGEDQFTEEDAGITRDVANLRIHVERAIGAIKQWRILDTKFDSQQMDNIGPIALVCAALVNL 1626
            F +  +T    FT W+ +L      LV  P  + V  + P  +++ G S+V  ++D TE++++       + A WS YK   TAK+L+ +TP GA  +VS A+ GR SDV + +     D  E          VMADRGF     +++     ++ P   RRG++QF++ +   T+  ANLRI+VE+AI  +K +R++  +     ++NI  I LVCAAL NL
Sbjct:   16 FGIGTTTVSNVFTTWIKILSKELGFLVYNPSKDVVKKTLPAKFKKPGYSNVRHIIDCTEIFIETPSNPTVRAATWSDYKHHNTAKVLVSITPNGAFNFVSKAWRGRTSDVNVTREPSFYDMCEPHD------EVMADRGFTIAEDLILRRCKLHIPPG--RRGKEQFSKAEVNKTKKTANLRIYVEQAIRRLKTFRLIKNELPISLLNNIDAIVLVCAALCNL 230          
BLAST of mRNA_P-littoralis_Contig771.2.1 vs. uniprot
Match: A0A6P7WIU4_IXOSC (uncharacterized protein LOC115313092 n=10 Tax=Ixodes scapularis TaxID=6945 RepID=A0A6P7WIU4_IXOSC)

HSP 1 Score: 134 bits (336), Expect = 9.110e-32
Identity = 91/263 (34.60%), Postives = 131/263 (49.81%), Query Frame = 1
Query:  841 KDDGRRIERRSKKLGGTNGLFFALFVMRTSTSLRVASTLFDVSESTGGRAFTAWLDLLGGCSRALVRLPDVNSVVASAPPNYRRRGLSSVAVVLDGTEVWVDKVWQTDAQHALWSPYKKTYTAKLLIGVTPAGAICYVSDAYAGRISDVELVKASGIIDDLERGGFGGKGMHVMADRGF--NAMAPILINIGMHYVAPPSKRRGEDQFTEEDAGITRDVANLRIHVERAIGAIKQWRILDTKFDSQQMDNIGPIALVCAALVN 1623
            K DG  ++RR+ KL   +  F  L  +RT  + R  S  F+++E+   + FT W++ L    RAL+  P V       P ++ +    +  +VLD TEV   K     AQ   +SPYK   T K ++G TP G ICYVS  + G  SD  +V+ S ++  L+ G        +M D+GF  N + P     G+    PP ++  E Q  E+D   TR VA+ R+ VER IG +KQ+ ILD  F    MD    +  VC  L N
Sbjct:    9 KTDGE-MKRRTGKLDLRDEFFMVLVRLRTGMAGRELSRNFNITEAHVSKVFTTWINFLQRELRALIYFPTVLETRKKLPDSFHK--FPNTRIVLDATEVRTQKPSALLAQRQTFSPYKHYNTYKAIVGCTPNGYICYVSGLWGGSASDRTIVEDSELMGQLQPGDA------IMVDKGFKFNDLPP-----GVQVHIPPFRQPHEPQMPEQDVANTRQVASARVVVERVIGRVKQFHILDRPFPITMMDIAEQVFQVCCFLSN 257          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig771.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6P4ZST3_BRABE1.730e-3830.47uncharacterized protein LOC109481748 n=1 Tax=Branc... [more]
A0A6J8DR39_MYTCO1.360e-3331.80Uncharacterized protein n=1 Tax=Mytilus coruscus T... [more]
A0A131XS54_IXORI3.100e-3337.39Putative isl2eu-1 adi n=1 Tax=Ixodes ricinus TaxID... [more]
A0A147BIZ4_IXORI3.980e-3336.36Putative isl2eu-1 adi (Fragment) n=1 Tax=Ixodes ri... [more]
A0A6J8DRP4_MYTCO1.430e-3231.80THAP-type domain-containing protein n=2 Tax=Mytilu... [more]
A0A6P7W3P5_IXOSC3.390e-3231.37uncharacterized protein LOC115330279 isoform X1 n=... [more]
A0A8B6F160_MYTGA3.420e-3231.10Uncharacterized protein n=1 Tax=Mytilus galloprovi... [more]
UPI001F5FA5773.660e-3232.35uncharacterized protein LOC101234787 n=1 Tax=Hydra... [more]
UPI00077ACDDF8.420e-3234.08uncharacterized protein LOC107345859 n=2 Tax=Acrop... [more]
A0A6P7WIU4_IXOSC9.110e-3234.60uncharacterized protein LOC115313092 n=10 Tax=Ixod... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig771contigP-littoralis_Contig771:30620..33792 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog6087.XP_004211413.1
PFAMsDDE_Tnp_4,HTH_Tnp_4,THAP
Model size1791
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons2
Evalue3.5e-35
EggNOG OGs28TD2@1|root,2R03G@2759|Eukaryota,39UG8@33154|Opisthokonta,3BMFJ@33208|Metazoa
DescriptionDDE superfamily endonuclease
Cds size1491
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791593.5124407-UTR-P-littoralis_Contig771:30619..307841680791593.5124407-UTR-P-littoralis_Contig771:30619..30784Pylaiella littoralis U1_48UTRP-littoralis_Contig771 30620..30784 +
1680791593.552584-UTR-P-littoralis_Contig771:33657..337921680791593.552584-UTR-P-littoralis_Contig771:33657..33792Pylaiella littoralis U1_48UTRP-littoralis_Contig771 33658..33792 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791593.5260224-CDS-P-littoralis_Contig771:30784..313751680791593.5260224-CDS-P-littoralis_Contig771:30784..31375Pylaiella littoralis U1_48CDSP-littoralis_Contig771 30785..31375 +
1680791593.537838-CDS-P-littoralis_Contig771:32757..336571680791593.537838-CDS-P-littoralis_Contig771:32757..33657Pylaiella littoralis U1_48CDSP-littoralis_Contig771 32758..33657 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig771.2.1prot_P-littoralis_Contig771.2.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig771 30785..33657 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig771.2.1

>prot_P-littoralis_Contig771.2.1 ID=prot_P-littoralis_Contig771.2.1|Name=mRNA_P-littoralis_Contig771.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=497bp
MPNSRKKCICQSEFCQNNGSVGEARVPRGRRQQFQQALGLENELTQPDLR
VWLGHFAADDLEASKQGSGAGGTEVTVRLKDGALPTQTDVEMAEASRGAL
SQLRRSQAVCDRHRAALLEACTKQQEQDTKIRDLQDRVQALEEELTTLGV
GLEKKQGDLKACAPWRASRGIDSSILQGLCEDSCRSLCGLSSAESLDDLW
RFLDYRGRAQSMNFYNADKEQASGLKDDGRRIERRSKKLGGTNGLFFALF
VMRTSTSLRVASTLFDVSESTGGRAFTAWLDLLGGCSRALVRLPDVNSVV
ASAPPNYRRRGLSSVAVVLDGTEVWVDKVWQTDAQHALWSPYKKTYTAKL
LIGVTPAGAICYVSDAYAGRISDVELVKASGIIDDLERGGFGGKGMHVMA
DRGFNAMAPILINIGMHYVAPPSKRRGEDQFTEEDAGITRDVANLRIHVE
RAIGAIKQWRILDTKFDSQQMDNIGPIALVCAALVNLTRKPFACTT*
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mRNA from alignment at P-littoralis_Contig771:30620..33792+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig771.2.1 ID=mRNA_P-littoralis_Contig771.2.1|Name=mRNA_P-littoralis_Contig771.2.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3173bp|location=Sequence derived from alignment at P-littoralis_Contig771:30620..33792+ (Pylaiella littoralis U1_48)
AGCCAACTCGACGAAGACACGCCGCACCGAAGACCCCCCTTCTCACAAGG CCCCCCTTCTCACAAGGCCCACACGCTTGCACAGCTTTGCTTCGAGTGTG TGAGAGCCGTCTCGGCAACATACGGCCGTTTTGGCAAAGGTAGACAGGCG CAGGTAGGGCGTCTTATGCCGAACAGCAGGAAAAAATGTATCTGCCAGTC AGAGTTCTGTCAAAACAACGGGTCCGTGGGTGAAGCCAGAGTCCCTCGGG GTAGGAGACAGCAGTTTCAACAAGCTCTCGGCCTGGAGAACGAGCTGACA CAGCCAGACCTAAGGGTGTGGCTCGGTCACTTTGCCGCCGATGACCTGGA GGCTAGCAAACAAGGAAGCGGGGCCGGCGGGACAGAGGTGACAGTGAGGT TGAAGGACGGGGCTCTTCCGACTCAGACAGACGTGGAGATGGCCGAAGCA TCCAGAGGAGCCTTGTCCCAGCTGCGGCGAAGTCAGGCCGTCTGCGATCG TCACCGGGCTGCACTGTTGGAAGCATGCACGAAGCAGCAGGAACAAGACA CTAAGATAAGAGACTTGCAGGATCGAGTTCAGGCTCTGGAGGAAGAGTTG ACAACTCTAGGGGTGGGGCTGGAGAAAAAACAAGGAGATCTAAAAGCGTG TGCTCCTTGGAGGGCGAGCCGCGGGATCGATTCATCCATTCTCCAAGGCT TATGCGAGGACTCGTGCAGGAGCCTCTGCGGCCTGTCCAGCGCGGAATCT CTGGACGTGAGTTTTGAGGCTTTGTTGCTCGCAGTATCGTTTGTAGAGGG TGTGATGACGAGTCGCATCCGAAAGCACTTAATCAAAATAAGCTGATTCT TCGTATATCATCCTGTACTCTATTCACCTTTGCGATACACAGCAGGTAGT GCTCGTATGATATGCTTTTGTGTCCTTGTATGATGCGCAACAAAAATAGT GTCCTGCGAAGGAATCATCGGGCGTCGGCCTCCCCCTTTGCATGTTATAA ATTAAGGCAAGCTCACCTCCCGAAGCAGCAGAGGCGAAGACTATCAGGTT GGGCCCGTCGCTTTTGGTTGACCGATGGTTCGATCGCTCTTACTAGGGGA GTTTATGGGATACAGCAGTGTGTACAGCAGTAAGATACTTCGCATGTTTT TTTTTCGTGGTTTTCGTCCGACGTCCTCGAAACTAAGTGTGCCTAAAACT TGAGCCTATGATAACGAAAAGATCGATTAACTCCTCTGTGCGACACGGCC ATGTTGTGGTTTCGTGCCTTTCACGCAAGAAAAACTTGAACCATCGCACA ACATGTTGTCCCGATAACCAGACTAAAATTTGGCAGCTGTGAGCGCACCA AGAGAAAAATTACGTGCGAGCACCTCACAGGCATACAGCCAGGGCCCGTC ACAAGTTCTCACAATAGACTGCTAACGTCCCGGGAGAGACTAGAAGGATT ACCCGGTTATCGCGATTGCGCCTTCTGCTTTCAAACACCGCGGAATGACG GCTGTTCAGCGCAGTCCACCTTTGCCCTACTAAATCCAATGTCTCTCAGT ACTTGTATGTGAAGCCCTCTTGATTTGGTCAATCTGGCATAGGGCCGGTT GCTACTGCTTGGTGCTTGGTGCGTTTGTTTGCTGCTGCGGTCATGGTGGT AGATGGTATGTTGACTAGTAGACGAACTCTTCGCTGCTGTCTGGTTGCTG GGTGTTGGGCATGCGTGTCAAGCGCGAGGATATACCGGTGCTTCGGCGTA TAATAATCGACTGCTGCTGTGAGTACTATTAACCATTGTTAATTTTGTTG CTGTTGCTCCATGCTGCGTGCGAGTCGTCCAGCACGTGCGCACGCACACA CATGATAATATATATTTCCGTGTGTGTTCGGGTAAGCCCGAATGGGCCAG GCTTCAAAAATAAACAAATATAAATGAAGCATTCCATCTTTCGAAAAAAT CCCACCCCGGGTTACAAAAACTTTAAAAGTCACACGAACGCGAAACACTA GTCAGATAACCAGATGAAGGATTGGTGGCCCAATGCACCGTTTAAACGTG CTCCTCGATCGTGTTCGCTGCTTCCCTCGCGAACCTGCTCTTTTGTCCTT GGTCGTTTTGTGGCGCTCCTTTGCGCATGTTTGGGCAGGACCTCTGGAGA TTCCTCGATTACAGAGGACGGGCGCAATCCATGAACTTCTACAACGCGGA CAAGGAGCAGGCGTCGGGCCTGAAAGACGACGGACGTAGGATAGAGAGGC GGAGCAAGAAACTTGGAGGGACTAATGGCCTGTTTTTCGCCCTGTTCGTC ATGCGCACCAGTACGTCGCTCCGGGTTGCGTCGACGTTATTCGACGTCAG CGAGTCTACAGGCGGCAGGGCTTTCACCGCATGGCTGGATCTTCTAgGGG GTTGTTCGAGGGCTCTCGTTCGGTTGCCAGACGTAAATAGCGTGGTGGCG AGTGCGCCCCCTAACTACCGCAGGAGAGGTCTTTCCTCAGTAGCTGTTGT CCTGGACGGTACAGAAGTCTGGGTAGACAAGGTCTGGCAGACGGACGCTC AGCATGCGCTGTGGTCTCCGTATAAAAAAACCTACACAGCCAAACTTCTC ATAGGTGTTACTCCCGCAGGTGCTATCTGCTACGTCTCCGACGCGTATGC CGGACGGATAAGTGATGTAGAGCTCGTGAAGGCTAGTGGCATCATCGATG ACCTGGAGCGCGGGGGGTTCGGGGGTAAGGGTATGCATGTAATGGCTGAC AGAGGTTTCAATGCCATGGCACCGATCCTGATCAATATAGGTATGCATTA CGTTGCACCTCCTAGTAAGCGCAGGGGCGAGGACCAGTTTACGGAGGAGG ACGCCGGGATCACGAGAGACGTTGCGAACCTCCGCATTCATGTAGAACGA GCCATCGGAGCTATCAAGCAATGGCGTATTCTAGACACCAAGTTCGATTC GCAGCAGATGGATAACATCGGGCCGATAGCTCTTGTTTGCGCGGCGCTCG TCAACCTCACTCGCAAGCCTTTTGCTTGCACGACCTGACGGTTGCGGCTG TTTCGAAATATCTAGATGGAATCCCTGCTGGTTTTTGCTACTCTATTCGG CTCACGAGACTGCGACAACGTATTGGCGCAAAATAGGGTTTCGGCCATCC TTCATTTCCGTGTGCAGCGTCCG
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Coding sequence (CDS) from alignment at P-littoralis_Contig771:30620..33792+

>mRNA_P-littoralis_Contig771.2.1 ID=mRNA_P-littoralis_Contig771.2.1|Name=mRNA_P-littoralis_Contig771.2.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1491bp|location=Sequence derived from alignment at P-littoralis_Contig771:30620..33792+ (Pylaiella littoralis U1_48)
ATGCCGAACAGCAGGAAAAAATGTATCTGCCAGTCAGAGTTCTGTCAAAA
CAACGGGTCCGTGGGTGAAGCCAGAGTCCCTCGGGGTAGGAGACAGCAGT
TTCAACAAGCTCTCGGCCTGGAGAACGAGCTGACACAGCCAGACCTAAGG
GTGTGGCTCGGTCACTTTGCCGCCGATGACCTGGAGGCTAGCAAACAAGG
AAGCGGGGCCGGCGGGACAGAGGTGACAGTGAGGTTGAAGGACGGGGCTC
TTCCGACTCAGACAGACGTGGAGATGGCCGAAGCATCCAGAGGAGCCTTG
TCCCAGCTGCGGCGAAGTCAGGCCGTCTGCGATCGTCACCGGGCTGCACT
GTTGGAAGCATGCACGAAGCAGCAGGAACAAGACACTAAGATAAGAGACT
TGCAGGATCGAGTTCAGGCTCTGGAGGAAGAGTTGACAACTCTAGGGGTG
GGGCTGGAGAAAAAACAAGGAGATCTAAAAGCGTGTGCTCCTTGGAGGGC
GAGCCGCGGGATCGATTCATCCATTCTCCAAGGCTTATGCGAGGACTCGT
GCAGGAGCCTCTGCGGCCTGTCCAGCGCGGAATCTCTGGACGACCTCTGG
AGATTCCTCGATTACAGAGGACGGGCGCAATCCATGAACTTCTACAACGC
GGACAAGGAGCAGGCGTCGGGCCTGAAAGACGACGGACGTAGGATAGAGA
GGCGGAGCAAGAAACTTGGAGGGACTAATGGCCTGTTTTTCGCCCTGTTC
GTCATGCGCACCAGTACGTCGCTCCGGGTTGCGTCGACGTTATTCGACGT
CAGCGAGTCTACAGGCGGCAGGGCTTTCACCGCATGGCTGGATCTTCTAg
GGGGTTGTTCGAGGGCTCTCGTTCGGTTGCCAGACGTAAATAGCGTGGTG
GCGAGTGCGCCCCCTAACTACCGCAGGAGAGGTCTTTCCTCAGTAGCTGT
TGTCCTGGACGGTACAGAAGTCTGGGTAGACAAGGTCTGGCAGACGGACG
CTCAGCATGCGCTGTGGTCTCCGTATAAAAAAACCTACACAGCCAAACTT
CTCATAGGTGTTACTCCCGCAGGTGCTATCTGCTACGTCTCCGACGCGTA
TGCCGGACGGATAAGTGATGTAGAGCTCGTGAAGGCTAGTGGCATCATCG
ATGACCTGGAGCGCGGGGGGTTCGGGGGTAAGGGTATGCATGTAATGGCT
GACAGAGGTTTCAATGCCATGGCACCGATCCTGATCAATATAGGTATGCA
TTACGTTGCACCTCCTAGTAAGCGCAGGGGCGAGGACCAGTTTACGGAGG
AGGACGCCGGGATCACGAGAGACGTTGCGAACCTCCGCATTCATGTAGAA
CGAGCCATCGGAGCTATCAAGCAATGGCGTATTCTAGACACCAAGTTCGA
TTCGCAGCAGATGGATAACATCGGGCCGATAGCTCTTGTTTGCGCGGCGC
TCGTCAACCTCACTCGCAAGCCTTTTGCTTGCACGACCTGA
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