mRNA_P-littoralis_Contig77.127.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig77.127.1 vs. uniprot
Match: A0A6H5J668_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J668_9PHAE) HSP 1 Score: 437 bits (1124), Expect = 2.690e-142 Identity = 299/388 (77.06%), Postives = 310/388 (79.90%), Query Frame = 1
Query: 49 MMLSVLEHLAATETDLPSEESRRHLTSAISSLSSAFNLSLEDSKQVRELSLKPHTLPSVFRAGCAALGAKSAAQQLSELQSSEAFGQFVKVVSGKGYFKGVEEGSEGYDERMSKLVAKFKARTEVASGGPPVEEAGVSGSSPRSAPAAAAAXXXXXXXXXXXXXXXXXXXXXKLADEKKAEEVKGEGNKLLLAKDYEGAEARYTEALELSPEGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPTYAKAYTRLGYAYFQLEDYEASVKAYKKSLEIEPGNAANTKSLRRAASKLSAXXXXXXXXXXXXXXXXXXXXXIPDVSGLAAMMGGAXXXXXXXX-LASMLQGXXXXXXXXXXXXXXXXXXXXXXXMLNNPNMMAQAQQM 1209
MMLSVLEHLA+ E DLPSE SR H+ SAISSLSSAF LSLED KQVRELSLKPHTL S+FRAGCAALGAKSA QQL+ELQSSEAF QFVKVVS KGYFKGVEEGSEGYDERM+KLVAKFKARTE ASGGPPVEEAG G+S R XXXXXXXXXXXXXXXX K ADEKKAEEVKGEGNKLLLAKDYEGAEA+YTEALELSP GPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNP+YAKAYTRLGYAYFQLEDYEA+VKAYKKSLEIEPGNAANTKSLRRA +KL A XXXX XXXXXXXX LASM+Q XXXXXXXXXX MLNNPNMMAQAQQM
Sbjct: 1 MMLSVLEHLASAEGDLPSE-SRTHVASAISSLSSAFGLSLEDPKQVRELSLKPHTLESIFRAGCAALGAKSAGQQLAELQSSEAFSQFVKVVSAKGYFKGVEEGSEGYDERMAKLVAKFKARTEAASGGPPVEEAG--GASFRXXXXXX--XXXXXXXXXXXXXXXXPATGAKAADEKKAEEVKGEGNKLLLAKDYEGAEAKYTEALELSPSGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPSYAKAYTRLGYAYFQLEDYEAAVKAYKKSLEIEPGNAANTKSLRRATAKLGARGDADEIATRGAGGGAPXXXXXXXXXXXXXXXXXXXXXXXXXXGLASMIQNLAGVGXXXXXXXXXXAPAGGLAGMLNNPNMMAQAQQM 383
BLAST of mRNA_P-littoralis_Contig77.127.1 vs. uniprot
Match: I2CPK1_NANGC (Conserved tpr domain protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPK1_NANGC) HSP 1 Score: 172 bits (436), Expect = 1.500e-44 Identity = 124/320 (38.75%), Postives = 176/320 (55.00%), Query Frame = 1
Query: 91 DLPSEESRRHLTSAISSLSSAFNLSLEDSKQVRELSLKPHTLPSVFRAGCAALGAKSAAQQLSELQSSEAFGQFVKVVSGKGYFKGVEEGSEGYDERMSKLVAKFKARTEVASGGPPVEEAGVSGSSPRSAPAAAAAXXXXXXXXXXXXXXXXXXXXXKLADEKKAEEVKGEGNKLLLAKDYEGAEARYTEALELSPEGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPTYAKAYTRLGYAYFQLEDYEASVKAYKKSLEIEPGNAANTKSLRRAASKLSAXXXXXXXXXXXXXXXXXXXXXIPDVSGLAAMMGG 1050
DL + SA+++L S + + S KP TL +F AG AL ++ +++ L++ F Q++ ++ KG+FK VEEGS+ Y +R K AKFK + E S P SP AD+ +A+ +KGEGN + AKDYE A+ YT+A+ L P G +SH+Y NRAAA +LG + AV D Q+AI+LNP+Y+KAY+RLGYA+F L+ Y + AY K+L+++P NAAN + L +A +K+ A XXXXXXXXXXXX +PD S LA +MGG
Sbjct: 20 DLQGSAQTPEMESALATLRSTLGVDPAQGSDIAAYSYKPATLSQIFTAGVQALKLQTVGVEMAALKADPLFQQYLGKITEKGFFKDVEEGSKAYIDRFMKAAAKFKEKQEQVSSATP---------SP--------------------------------ADQARADALKGEGNAAISAKDYEKADICYTKAITLVPAGASSHLYYSNRAAARSHLGNHSGAVEDAQKAIELNPSYSKAYSRLGYAHFYLQQYSKAKDAYTKALDLDPANAANKEYLAKAEAKI-AEAEGKEEGXXXXXXXXXXXXGMPDFSQLAGLMGG 297
BLAST of mRNA_P-littoralis_Contig77.127.1 vs. uniprot
Match: A0A482RZ77_9ARCH (Tetratricopeptide repeat protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RZ77_9ARCH) HSP 1 Score: 157 bits (396), Expect = 1.180e-39 Identity = 98/255 (38.43%), Postives = 138/255 (54.12%), Query Frame = 1
Query: 142 LSSAFNLSLEDSKQVRELSLKPHTLPSVFRAGCAALGAKSAAQQLSELQSSEAFGQFVKVVSGKGYFKGVEEGSEGYDERMSKLVAKFKARTEVASGGPPVEEAGVSGSSPRSAPAAAAAXXXXXXXXXXXXXXXXXXXXXKLADEKKAEEVKGEGNKLLLAKDYEGAEARYTEALELSPEGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPTYAKAYTRLGYAYFQLEDYEASVKAYKKSLEIEPGNAA 906
L S FN+S ++ S P L + AG A+L KS A E +++ F F++ V KGYF+G EEG+ Y R +KLV KF+ + AS GP E+ EK+AEE+K +GN + KDY+ A Y+EA++LS EGPNSHVY CNRAAA CYL + +DAV DC ++ L+P Y KA++RLG AY+ LE ++ ++ AY+++ E+EP NAA
Sbjct: 36 LESEFNVSFSPDN-FKQYSTYPAGLEEIVEAGKASLNLKSFADAEEEAKANPKFSAFLETVVNKGYFQGTEEGTLEYLRRYAKLVKKFQEK--AASAGPSKEDL-----------------------------------------EKQAEEMKLKGNSAIAQKDYKTAVEHYSEAIKLSSEGPNSHVYYCNRAAASCYLNQYEDAVNDCLSSVALSPDYVKAFSRLGLAYYHLEKFQEALDAYERAAELEPDNAA 246
BLAST of mRNA_P-littoralis_Contig77.127.1 vs. uniprot
Match: A0A835ZH25_9STRA (SGTA_dimer domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH25_9STRA) HSP 1 Score: 162 bits (409), Expect = 2.240e-39 Identity = 122/276 (44.20%), Postives = 162/276 (58.70%), Query Frame = 1
Query: 121 LTSAISSLSSAFNLSLEDSKQVRELSLKPHTLPSVFRAGCAALGAKSAAQQLSELQSSEAFGQFVKVVSGKGYFKGVEEGSEGYDERMSKLVAKFKARTEVASGGPPVEEAGVSGSSPRSAPAAAAAXXXXXXXXXXXXXXXXXXXXXKLADEKKAEEVKGEGNKLLLAKDYEGAEARYTEALELSPEGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPTYAKAYTRLGYAYFQLEDYEASVKAYKKSLEIEPGNAANTKSLRRAASKLSA 948
LT+A ++L +AF + D+ Q +ELS +P TL S+F AG A GA +A Q+ + + F +FV V+S K EG+ YD +M+K++A FK + EE XXXXXXXXXXXXXXXXXXX K EGN+ + + + AEA Y+ AL+LSP GPNSH+Y CNRAAA C+L D AV DC +IDL+P Y KAY RLGYAY+ +ED AY K++E+EP N AN +SL++A +KL A
Sbjct: 33 LTAAATALKAAFGVDTADAAQAKELSYEPATLDSIFAAGVKATGAVTALQEREAMMQNPLFKKFVGVISAKAPL--AAEGTPEYDVQMNKIIATFKTKFGNK------EE-------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXAAKAEGNEYIKTQAFRKAEAAYSRALDLSPTGPNSHIYHCNRAAARCFLNDWDAAVEDCLASIDLSPAYIKAYARLGYAYYNMEDXXXXXXAYTKAIELEPNNTANKESLKKAEAKLKA 281
BLAST of mRNA_P-littoralis_Contig77.127.1 vs. uniprot
Match: A0A812SY99_SYMMI (SGT2 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812SY99_SYMMI) HSP 1 Score: 154 bits (390), Expect = 3.830e-39 Identity = 102/252 (40.48%), Postives = 139/252 (55.16%), Query Frame = 1
Query: 139 SLSSAFNLSLEDSKQVRELSLKPHTLPSVFRAGCAALGAKSAAQQLSELQSSEAFGQFVKVVSGKGYFKGVEEGSEGYDERMSKLVAKFKARTEVASGGPPVEEAGVSGSSPRSAPAAAAAXXXXXXXXXXXXXXXXXXXXXKLADEKKAEEVKGEGNKLLLAKDYEGAEARYTEALELSPEGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPTYAKAYTRLGYAYFQLEDYEASVKAYKKSLEIEP 894
S+ SAF +S +ELS P L + AG A LGA + Q ++ S+ F F+ V+ +GYFKG E GS Y +R+SK++AKFKA+ A G PP + G+S +AP+ A A EK AEE K GN + KDYE A Y+EA+ SP G NSH+Y NRAAA C+L R + A DC+ AI LN +Y KAY+RLG + F L Y A+V AY++++++EP
Sbjct: 1 SIESAFGISSISVDDFQELSYYPVGLSELMEAGVAELGASTCGQNQQDILSNNKFQSFLGTVTERGYFKGTEPGSVEYLQRLSKVIAKFKAKYHGA-GEPPSK-----GASAAAAPSGTA---------------------DSAAREKLAEEKKAAGNAAVGKKDYEEAVQLYSEAISFSPGGANSHIYYGNRAAAYCHLNRYELAAADCEAAIALNSSYVKAYSRLGLSRFFLGQYSAAVNAYQRAVDLEP 225
BLAST of mRNA_P-littoralis_Contig77.127.1 vs. uniprot
Match: A0A7S2FWT3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FWT3_9STRA) HSP 1 Score: 152 bits (383), Expect = 9.110e-37 Identity = 99/277 (35.74%), Postives = 149/277 (53.79%), Query Frame = 1
Query: 118 HLTSAISSLSSAFNLSLEDSKQVRELSLKPHTLPSVFRAGCAALGAKSAAQQLSELQSSEAFGQFVKVVSGKGYFKGVEEGSEGYDERMSKLVAKFKARTEVASGGPPVEEAGVSGSSPRSAPAAAAAXXXXXXXXXXXXXXXXXXXXXKLADEKKAEEVKGEGNKLLLAKDYEGAEARYTEALELSPEGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPTYAKAYTRLGYAYFQLEDYEASVKAYKKSLEIEPGNAANTKSLRRAASKLSA 948
+L +A L+ F+++ +D Q E +L+ TL + AG LGAKS ++L ELQ ++ F QF+ V KG+F + G Y R ++V KFK R S ++ AA AA +E+KAE+ K EGN+ L AK+Y+ A Y++A+++ P+GP SH+Y NRA A YL ++ AV DC AI+ NP YAKAYTRLG A L D+ ++V+ +KK++E+EP N ++ + L+ A K +A
Sbjct: 33 NLEAATQCLAENFSINTDDINQKEEYALESQTLLELLAAGKTQLGAKSYNEELEELQENKMFQQFLGSVKSKGFFNDTKPGEPEYKARYRRMVTKFKQRMN---------------DSKANSKAAVAAGP---------------------TNEEKAEKFKVEGNETLKAKNYDAAVELYSKAIDVCPDGPKSHIYFANRAMARHYLKQHLGAVDDCNAAIERNPAYAKAYTRLGLAQQALNDWSSAVENHKKAVELEPSNKSSAQYLKTAQQKYAA 273
BLAST of mRNA_P-littoralis_Contig77.127.1 vs. uniprot
Match: A0A662X6P5_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X6P5_9STRA) HSP 1 Score: 140 bits (352), Expect = 4.430e-32 Identity = 98/284 (34.51%), Postives = 139/284 (48.94%), Query Frame = 1
Query: 223 VFRAGCAALGAKSAAQQLSE---------LQSSEAFGQFVKVVSGKGYFKGVEEGSEGYDERMSKLVAKFKARTEVASGGPPVEEAGVSGSSPRSAPAAAAAXXXXXXXXXXXXXXXXXXXXXKLADEKKAEEVKGEGNKLLLAKDYEGAEARYTEALELSPEGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPTYAKAYTRLGYAYFQLEDYEASVKAYKKSLEIEPGNAANTKSLRRAASKLSAXXXXXXXXXXXXXXXXXXXXXIPDVSGLAAMMG 1047
VF AG ALG ++ ++E L+ E + ++V + KG+FKG GS + R +K +AKFK + PV K E KAEEVK GN L ++DY GA A Y EAL+LSP+GP+SH+Y N AAAL YLG+ D + C+++I L P+Y KAY+R+G A QL+DY+ +V ++++ LE++ NAA L A KL X XX +PD+S LA+M+G
Sbjct: 47 VFAAGLQALGLETGTAAVAEASVDEDPVVLKHPELWKKWVAKLESKGFFKGAAPGSSEHAARTTKALAKFKEKFGDVKPTAPV--------------------------------------LSKAEKEAKAEEVKARGNAALTSRDYAGAAALYREALQLSPDGPSSHIYHSNLAAALMYLGKYTDVIDHCEQSIALQPSYVKAYSRMGGAQVQLKDYDGAVDSFRRGLEVDSANAACRDGLADAERKLRQMQTTPSAASSGPSQXAGGXXGMPDLSNLASMLG 292
BLAST of mRNA_P-littoralis_Contig77.127.1 vs. uniprot
Match: F0W8P3_9STRA (Uncharacterized protein AlNc14C36G3169 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W8P3_9STRA) HSP 1 Score: 136 bits (343), Expect = 8.910e-31 Identity = 105/313 (33.55%), Postives = 151/313 (48.24%), Query Frame = 1
Query: 142 LSSAFNLSLEDSKQVRELSLKPHTLPS----VFRAGCAALGAKSAAQQLSELQ------SSEAFGQFVKVVSGKGYFKGVEEGSEGYDERMSKLVAKFKARTEVASGGPPVEEAGVSGSSPRSAPAAAAAXXXXXXXXXXXXXXXXXXXXXKLADEKKAEEVKGEGNKLLLAKDYEGAEARYTEALELSPEGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPTYAKAYTRLGYAYFQLEDYEASVKAYKKSLEIEPGNAANTKSLRRAASKLSAXXXXXXXXXXXXXXXXXXXXXIPDVSGLAAMMGG 1050
L+ AF L+L D++Q +EL LK +L + +F AG + G SA Q S Q + E + ++VK + KG+F G GS+ Y +RM+K + KFKA+ G VEE A E KA E+K GN L A DY+ A Y EALELSP GP+SH+Y N AA+L Y+ + D+A+ C+ AI ++P + KAY R+G A QL+DY+ ++ ++++ LEI+ NA L A L +PD+S LA M+GG
Sbjct: 38 LTEAFKLNLHDAQQ-QELYLKQESLNASFEKIFTAGLKSSGLLSAESQFSTEQDPIIKKNPELWSKWVKKLEEKGFFSGAAVGSKEYHDRMAKALGKFKAKF----GDVRVEEC-------------------------------KPQREFSEAIETKANEMKNRGNAALNAGDYQLAAKHYREALELSPNGPSSHIYHSNLAASLMYMQKFDEAISHCEAAIAIDPKFLKAYNRMGAAQIQLKDYQGAIDSFRRGLEIDESNAPCKAGLEEAEKLLQQSQSAAQPSSARTPAGG-----MPDLSSLAGMLGG 309
BLAST of mRNA_P-littoralis_Contig77.127.1 vs. uniprot
Match: A0A2P4Y6N8_9STRA (Hsc70 cochaperone n=2 Tax=Phytophthora TaxID=4783 RepID=A0A2P4Y6N8_9STRA) HSP 1 Score: 132 bits (333), Expect = 1.650e-29 Identity = 95/315 (30.16%), Postives = 148/315 (46.98%), Query Frame = 1
Query: 130 AISSLSSAFNLSLEDSKQVRELSLKPH-TLPSVFRAGCAALGAKSAAQQLSELQSS-------EAFGQFVKVVSGKGYFKGVEEGSEGYDERMSKLVAKFKARTEVASGGPPVEEAGVSGSSPRSAPAAAAAXXXXXXXXXXXXXXXXXXXXXKLADEKKAEEVKGEGNKLLLAKDYEGAEARYTEALELSPEGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPTYAKAYTRLGYAYFQLEDYEASVKAYKKSLEIEPGNAANTKSLRRAASKLSAXXXXXXXXXXXXXXXXXXXXXIPDVSGLAAMMGG 1050
A++ L+ AF + + D++Q R+L++ + +F AG AL ++ + SE+ E + ++V + KG+FK G+ Y R +K +AKFK + K E KAEEVK +GN L +DYEGA Y EAL+LS +GP+SH+Y N AAAL YLG+ + + C+++I L P+Y KAY+R+G A QL+D++ ++ Y++ LE++ NAA L A K +PD+S LA+M+GG
Sbjct: 33 ALARLTEAFGVDVHDAEQKRQLAVNGEASFDEIFAAGLKALKLETGTAETSEVDEDPVVKKHPELWKKWVAKLETKGFFKDAAPGTSEYATRTNKALAKFKEK-----------------------------------------FGDVKPELSKEEKEAKAEEVKAQGNAALSRQDYEGAAKLYREALKLSADGPSSHIYHSNLAAALMYLGKYSEVIDHCEQSIALKPSYVKAYSRMGSAQVQLKDFDGAIDTYRRGLEVDSTNAACRDGLADAERK--RRQMQTTPTASGSTPSAPAGGGMPDLSNLASMLGG 304
BLAST of mRNA_P-littoralis_Contig77.127.1 vs. uniprot
Match: H3GML2_PHYRM (STI1 domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GML2_PHYRM) HSP 1 Score: 132 bits (332), Expect = 2.080e-29 Identity = 111/317 (35.02%), Postives = 164/317 (51.74%), Query Frame = 1
Query: 115 RHLTSAISSLSSAFNLSLEDSKQVRELSLKPH-TLPSVFRAGCAAL----GAKSAAQQLSELQSS-EAFGQFVKVVSGKGYFKGVEEGSEGYDERMSKLVAKFKARTEVASGGPPVEEAGVSGSSPRSAPAAAAAXXXXXXXXXXXXXXXXXXXXXKLADEKKAEEVKGEGNKLLLAKDYEGAEARYTEALELSPEGPNSHVYLCNRAAALCYLGRNDDAVVDCQEAIDLNPTYAKAYTRLGYAYFQLEDYEASVKAYKKSLEIEPGNAANTKSLRRAASKLSAXXXXXXXXXXXXXXXXXXXXXIPDVSGLAAMMG 1047
+ + +A+S L+ AF + + D++Q R+L++ + +F AG AL GAK A + ++ E + ++V + KG+FK G+ + R +K + KFK + EE E KAEEVK +GN L +DYEGA Y EAL+LSPEGP+SH+Y N AAAL YLG+ D + C+++I L P Y KAY+RLG A QL+D++ ++ ++++ LE++ NAA L A K XXXXXXXXXXXX +PD+S LA+M+G
Sbjct: 28 QEIDTALSRLTEAFGVDVHDAEQRRQLAVDSDISFNEIFAAGLKALNLETGAKEAVDEDPVVKKHPELWKKWVAKLEAKGFFKDAAPGTSEHATRTAKALGKFKEKFGDVKPELSQEE-----------------------------------------KEAKAEEVKAQGNAALSRQDYEGAAKLYREALQLSPEGPSSHIYHSNLAAALMYLGKYTDVIDHCEQSIVLKPAYVKAYSRLGSAQLQLQDFDGAIDSFRRGLEVDSSNAACRDGLADAERK---RRQVQTXXXXXXXXXXXXAGGMPDLSNLASMLG 300 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig77.127.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig77.127.1 >prot_P-littoralis_Contig77.127.1 ID=prot_P-littoralis_Contig77.127.1|Name=mRNA_P-littoralis_Contig77.127.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=469bp MSVDTPTMMLSVLEHLAATETDLPSEESRRHLTSAISSLSSAFNLSLEDSback to top mRNA from alignment at P-littoralis_Contig77:555144..561343- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig77.127.1 ID=mRNA_P-littoralis_Contig77.127.1|Name=mRNA_P-littoralis_Contig77.127.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6200bp|location=Sequence derived from alignment at P-littoralis_Contig77:555144..561343- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig77:555144..561343- >mRNA_P-littoralis_Contig77.127.1 ID=mRNA_P-littoralis_Contig77.127.1|Name=mRNA_P-littoralis_Contig77.127.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1407bp|location=Sequence derived from alignment at P-littoralis_Contig77:555144..561343- (Pylaiella littoralis U1_48)back to top |