prot_P-littoralis_Contig77.117.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig77.117.1
Unique Nameprot_P-littoralis_Contig77.117.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length214
Homology
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BLAST of mRNA_P-littoralis_Contig77.117.1 vs. uniprot
Match: D7FZQ8_ECTSI (CCHC-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZQ8_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 1.110e-14
Identity = 70/214 (32.71%), Postives = 98/214 (45.79%), Query Frame = 0 
Query:    8 PAAVLRVFSEMLPNKRHVSRETTFRDRGKLRDINKL---------HSASTAVS--GAAHGYPGPSHLAAHHAARVAASSTAPQPRSRGSSVRGGGGRYSSAGTSVPLPFTPSVLP-PTATARRPAHQGGSARGNGRGA-SAPXXXXXXXXXADRKRYTDKLRENQQAMTSSPNADRCHNCADKGRVDLHHHKACAFSLCRRCKRGGHRAVDCTF 208
            P +VL VFS  L N + V+ ET   D  +++ + K+         H  +T  S   A  G P PS     +AA   A S A  PR+   +V           +S+P P    VLP P         +GG  RG G G+ S P         A    +  +++  Q+ +   P   +C+NCA+K R   HHH  CA+S+C RC RGGHRA  CT+
Sbjct:  213 PQSVLSVFSRKLSNAQGVTAETLLGDLQEMKLVRKMNGRHGQASTHQTTTKPSYARARGGIPFPS----PYAAAAPAGSVAGPPRAASMAV-----------SSLPAPV---VLPLPKKKGASGRKRGGGLRGPGAGSLSGPSPQRSPRELAALADFNAQIQAVQEKLPEIPGGPQCNNCANKARNRFHHHFTCAYSICTRCGRGGHRAAACTY 408
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig77.117.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZQ8_ECTSI1.110e-1432.71CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig77contigP-littoralis_Contig77:480340..480981 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig77.117.1mRNA_P-littoralis_Contig77.117.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig77 480216..481063 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig77.117.1 ID=prot_P-littoralis_Contig77.117.1|Name=mRNA_P-littoralis_Contig77.117.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=214bp
MVEQGGHPAAVLRVFSEMLPNKRHVSRETTFRDRGKLRDINKLHSASTAV
SGAAHGYPGPSHLAAHHAARVAASSTAPQPRSRGSSVRGGGGRYSSAGTS
VPLPFTPSVLPPTATARRPAHQGGSARGNGRGASAPPPPPSNAAAADRKR
YTDKLRENQQAMTSSPNADRCHNCADKGRVDLHHHKACAFSLCRRCKRGG
HRAVDCTFPPYRG*
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