prot_P-littoralis_Contig77.110.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig77.110.1
Unique Nameprot_P-littoralis_Contig77.110.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length720
Homology
BLAST of mRNA_P-littoralis_Contig77.110.1 vs. uniprot
Match: A0A6H5KWT1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWT1_9PHAE)

HSP 1 Score: 422 bits (1084), Expect = 3.320e-134
Identity = 295/554 (53.25%), Postives = 352/554 (63.54%), Query Frame = 0
Query:  186 RPPATATNPASRPAKS-SGSSVPSEKGGACQGRKSKSNARKEGD----PDDPGPDTKVCLLAVGTKQQQQKSRADGT-----------GNTNSSALSLGDMVEMLTVEIDRNGRETETEYVETGQRAVLQVEALARFDLRYGIVVLEVEESLAAATATARQLRVANSSTPIVAVAAPHVLRTT---LPSEMRRFFSEILEFPVPAATVRGLATRWLLGPPELAAVVARSGMAGVPIATAGITGAATATLRPPQAAMGSSSSTVTDTLVSSLSGAGRGMVTPSQXXXXXXXXXXXXXXXXXXXXXXGGDVWELPSSAEGXXXXXXXXXXXXXXXXXXXXXXLAAPRASLPSPSSAANGGEYDSLVVSQKHARIFGGGLEDRASPCRIFGEEFERQNAEMEEMEFDFMFRHGTIVLRVEEDKFGNIVSEVSSACEYATAHFGDLTGKPLESMFEYPATDKTTAGKIVRHIEKSDTDSMCSYINLKSEVRWVTSSFISVRSLSKRPERGP----GRERLPPWYVLLKVCLPSTLGLIKEPELLESMYSKKASEASKR 716
            RPP+ AT    R AK   G +    KGGA Q R+ K     +GD    P++  PD +VCLLAVGTK+Q+ +  ADGT                S  SL D++ MLT EI+RNGRE ETE VETG+RAVLQV ALAR +LRYGIV+LEVE S AAA ATAR+L+ AN STPI+AVA P  + T    L SE  R F+EIL FPV AATVRGLATR+LL PP +AA  A SGMAG PI++   T AAT        A   S S    TLV SL  AG     P  XXXXXXXXXXX            G  W L   AE                          PRA++ SPSS++     ++L   ++  R+FGG  EDRA PC +FGEEFE +NAE+E+ E+DF+FRHGTI++RVEE   G +V  V S CEYAT HFGDLTG PL+ +F   AT+K TA KI+ HIE+SD+DSMC Y+NLKS+VR  TSSF+S+RSLSKRPER P    G ERLPPWYVLLKVCLPS LGLIKEPELL+ +YS+KA+E SKR
Sbjct:  143 RPPSAATXXPPRAAKPFPGPTKARAKGGARQPRRVK--LHDDGDXXXXPEEGAPDHRVCLLAVGTKKQRLRG-ADGTVTVAXXXXXXXXXAMDSGASLDDVIGMLTAEINRNGREAETERVETGERAVLQVRALARSELRYGIVLLEVEGSRAAAIATARELKAANPSTPIIAVAYPRAMLTPAQLLSSEGWRDFNEILPFPVSAATVRGLATRYLLAPPGVAAAAASSGMAGEPISSGPSTAAATFGQLGQHTA--GSGSCCGGTLVPSLPVAGGSGEVPXXXXXXXXXXXXXGTGAALSPH---GVAWSLLRDAE------EGVLLPSQPLLSVTNPCARRPRAAMTSPSSSSPSTLEETLASLKR--RVFGGSEEDRALPCGLFGEEFEMKNAEIEDREYDFVFRHGTILVRVEEGLNGEVVPMVFSLCEYATDHFGDLTGLPLQWLFHEDATNKKTAAKIMMHIERSDSDSMCCYVNLKSKVRRWTSSFVSIRSLSKRPERAPEQRFGHERLPPWYVLLKVCLPSALGLIKEPELLQQLYSRKAAETSKR 680          
BLAST of mRNA_P-littoralis_Contig77.110.1 vs. uniprot
Match: D7FN90_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN90_ECTSI)

HSP 1 Score: 246 bits (627), Expect = 6.850e-73
Identity = 127/206 (61.65%), Postives = 156/206 (75.73%), Query Frame = 0
Query:  516 SPSSAANGGEYDSLVVSQKHARIFGGGLEDRASPCRIFGEEFERQNAEMEEMEFDFMFRHGTIVLRVEEDKFGNIVSEVSSACEYATAHFGDLTGKPLESMFEYPATDKTTAGKIVRHIEKSDTDSMCSYINLKSEVRWVTSSFISVRSLSKRPERGP----GRERLPPWYVLLKVCLPSTLGLIKEPELLESMYSKKASEASKRV 717
            SPSS++     ++L   ++  R+FGG  EDR   C +FGEEFE +NAE+E+ E+DF+FRHGTI++RVEE   G +V  V S CEYAT HFGDLTG PL+ +F   AT+K TA KI+ HIE+SD+DSMC Y+NLKS+VR  TSSF+S+RSLS RPER      G E LPPWYVLLKVCLPS LGLIKEPELL+ +YSKKA+EASKR 
Sbjct:    3 SPSSSSPATVEETLASLKR--RVFGGSEEDRELSCGLFGEEFEMKNAEIEDREYDFVFRHGTILVRVEEGVGGEVVPMVFSLCEYATDHFGDLTGLPLQWLFHEDATNKKTAAKIMMHIERSDSDSMCCYVNLKSKVRRWTSSFVSIRSLSNRPERAHEQRVGHEHLPPWYVLLKVCLPSALGLIKEPELLQQLYSKKAAEASKRA 206          
BLAST of mRNA_P-littoralis_Contig77.110.1 vs. uniprot
Match: D7FN91_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN91_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 1.760e-8
Identity = 102/307 (33.22%), Postives = 127/307 (41.37%), Query Frame = 0
Query:   11 FSSPEASPSATSAAAAANDEDNIFGVGADDTFFSIY--ALASTPPPPTSTATRPALQWPSSAYSAPPPPCEPSAATAPLPTITTTTAPSMGVT------KVALPASKSFDFGGSRSTQDRLSPQRGSSISPSPSLQSAVPPLFPCSSSPDPAGGDGLIAPVDAAAAXXXXXGLAPTVAKTLKMRPPATATNPASRPAKSSGSSVPSEKGGACQGRKSK--SNARKEGDPDDPGPDTKVCLLAVGTKQQQ--------QKSRADGTGNTNSSALSLGDMVEMLTVEIDRNGRETETEYVETGQRAVLQ 299
            F S   SPSA +A A A+DED+         F  +Y  ALA TPPPP S A  P +QW                          T  P  G            PAS S +FGG+R+     SP   SS SP+ +LQ+    L P S S         +A V A                     P   A  P+S P K+        KGGA + R+ K   +           PD +VCLLAVGTK+Q+                     S  SL D++ MLT EI+RNGRE ETE V+TG+RAVLQ
Sbjct:   13 FPSSGVSPSAMTAEAMAHDEDS---------FVDLYKGALAVTPPPP-SNARSPQMQW-------------------------GTALPFAGNAGNDDHIAAPAPASGSIEFGGTRANP--FSPLPLSSASPT-TLQTNKQSLLPASRS------SVAVAAVAATPTPVLPPXXXXXXXXXXXXXP--RAAKPSSGPTKARA------KGGARKPRRVKLHDDGXXXXXXXXGAPDHRVCLLAVGTKKQRLGXXXXXXXXXXXXXXXXAMDSGASLDDVIGMLTAEINRNGREAETERVDTGERAVLQ 267          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig77.110.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KWT1_9PHAE3.320e-13453.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FN90_ECTSI6.850e-7361.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FN91_ECTSI1.760e-833.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 448..471
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..90
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 194..209
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..145
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..83
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 418..520
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..266
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 418..476
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 219..233
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 242..266
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 493..520
NoneNo IPR availableSUPERFAMILY81995beta-sandwich domain of Sec23/24coord: 445..496

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig77contigP-littoralis_Contig77:409664..414975 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig77.110.1mRNA_P-littoralis_Contig77.110.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig77 409560..414975 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig77.110.1 ID=prot_P-littoralis_Contig77.110.1|Name=mRNA_P-littoralis_Contig77.110.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=720bp
MRPSNQVAGVFSSPEASPSATSAAAAANDEDNIFGVGADDTFFSIYALAS
TPPPPTSTATRPALQWPSSAYSAPPPPCEPSAATAPLPTITTTTAPSMGV
TKVALPASKSFDFGGSRSTQDRLSPQRGSSISPSPSLQSAVPPLFPCSSS
PDPAGGDGLIAPVDAAAAAAAAAGLAPTVAKTLKMRPPATATNPASRPAK
SSGSSVPSEKGGACQGRKSKSNARKEGDPDDPGPDTKVCLLAVGTKQQQQ
KSRADGTGNTNSSALSLGDMVEMLTVEIDRNGRETETEYVETGQRAVLQV
EALARFDLRYGIVVLEVEESLAAATATARQLRVANSSTPIVAVAAPHVLR
TTLPSEMRRFFSEILEFPVPAATVRGLATRWLLGPPELAAVVARSGMAGV
PIATAGITGAATATLRPPQAAMGSSSSTVTDTLVSSLSGAGRGMVTPSQQ
QQQQQQQQQQQQQQQQQQQQQGGDVWELPSSAEGGKMTSPPPSTLPGFCT
SSPSTGLAAPRASLPSPSSAANGGEYDSLVVSQKHARIFGGGLEDRASPC
RIFGEEFERQNAEMEEMEFDFMFRHGTIVLRVEEDKFGNIVSEVSSACEY
ATAHFGDLTGKPLESMFEYPATDKTTAGKIVRHIEKSDTDSMCSYINLKS
EVRWVTSSFISVRSLSKRPERGPGRERLPPWYVLLKVCLPSTLGLIKEPE
LLESMYSKKASEASKRVSQ*
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