prot_P-littoralis_Contig77.100.5 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig77.100.5
Unique Nameprot_P-littoralis_Contig77.100.5
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1341
Homology
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BLAST of mRNA_P-littoralis_Contig77.100.5 vs. uniprot
Match: A0A6H5JAL8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JAL8_9PHAE)

HSP 1 Score: 561 bits (1446), Expect = 1.090e-173
Identity = 835/1271 (65.70%), Postives = 910/1271 (71.60%), Query Frame = 0 
Query:   61 QQGGCSPTSTSGSATPPVARLRMLHLLTLERQRSQRRLSPRLACAADTQLGMAMPVVGRDSVDRMKEWGVKGMWKEAREQLEKEGSGGLTPSLGAYEGAVQALAVSGKCAEAVFLLGDIKDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFGKNTGKVTNLLLKMRAQGLDTDDYRYRQAMKACAMASDPTQVISVWKLFVGGGRLVEDVVPGDVSRVAKAMGALGDWRSIVKLLESKTLEGGGGLPALNA---------SSYNWLVSATWH--------------GR-GTP-DADTYFLAFRAFLKSRGRHWSAALDMFRAMQASSS-TLPRE-DGVI---EGVEAAD-------PSVFLTADIWCKTIATLAQGSQPRDALPAALSLMREAEEAGVEVDAATTDVVLAALGKAKGKDDQLLALFLGAEKRGLRLKRPSYAWAVVAYKRSGRTREALDAALAFSERGIAMTVVGWNAAMHAASIMGQPETALKLLEEAKVKGTKLTEVSYSTAIGACARATTDIEENARKAVSLLEEMKAAGLKPYPPAHQAALSAVAASEGHEAAXXXXXXXXXXXXXXXXXXYNPALKIAARAGDWMVAISAIDVMTKAAMTDFEAGPDVVSFNFAMSACAKAGESEARGAEIHLRLAHRVLSRMQACGLAXXXXXXXXXXXXXXXXXMWEKALELLAEARRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDWDKXXXXXXXXXXXXXXXXXXXXXXXXXVCGRSGDVHQALAQLENARRDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMQTSGDPALXXXXXXXXXXXXXXXXXXXWALTLWLFSEIKAAGLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHARTGKTTVALALMDEMKESMPCDETTYSTVVHGCSQTRDWKAAERLLKDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGEAEVAEIFLEMMRNRRVELDVVGRAAAMVAFGRGGRADKALGLMDEMRKNGPSPNLQCFNGAIEACALADDIDGGMTL 1294
            Q+ GC   S   S  P     +    L +E   +  R   R A AA    G     V R S    +  G  G W EA EQLEKE  GGLTPSLGA+E A+QAL                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                       DD  YR+AMKACAMA+DPTQV+ VW+LFVG GR+V DV   +VSRVA+AMGALGDW+ I+ LL +++  GGG LP L+          + YNWLVSA                 GR G P DADTY LAF+AF+KS GRHW  ALD+FR MQ+SS  T PR  DG +   EGV  A+        S FL+ D+WCKTI T+AQGS PR  L AALSLM EA++AGVEVDAATTD +L ALGKAKGKD+QLLALF  AE+RGLRLKR SYAWAVVAYKR G+ +EALD+AL+FSERGI MTVVGWNAAMHAAS+ G+P  AL+LLEEAK KG K TEV+Y+TAIGACA+ATT+++ NAR                  PAHQAAL+A+AASEGH AA                  Y+P LK AA+ GDW  AI+ IDVMT+A++TD +AGPDVV FN+AMSACAKAGE E         LAHRV+SR+QACGLA     XXXXXXXXXXXX              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     XXXXXXXXXXXXXXXXXXXXXXXXX                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMQTSGDPALXXXXXXXXXXXXXXXXXXXWALTLWLFSEIKAAGLK   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                  +SMPCDETT+S ++HGC+QTRDW AA RLL++M                                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGEAE+AEI LEMMR++ VELD VGR+ A+VAFGRGGR DKAL LMD +R+NG  PNLQCFNGAIEACALADDIDGGM+L
Sbjct:    6 QRSGCRLPSRLSSGAPSAELGQSSEALAVE---ALARAPKRTAVAAAA--GSTGAAVARASPVEKQSGG--GKWTEAIEQLEKERGGGLTPSLGAFERAIQALGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADDATYRKAMKACAMANDPTQVVGVWELFVGKGRVVTDVAAAEVSRVARAMGALGDWQGIIGLLGTRSTAGGGPLPDLDRLRAMVHPAFAIYNWLVSAHAQLGDAKAVLTTIGNMGRNGHPADADTYSLAFKAFVKSGGRHWGGALDVFRTMQSSSGVTTPRGGDGSVMEVEGVGVAEVEASAGVSSEFLSTDVWCKTITTVAQGSPPRKTLSAALSLMEEAQQAGVEVDAATTDAILTALGKAKGKDEQLLALFRQAEERGLRLKRQSYAWAVVAYKRCGKAKEALDSALSFSERGIVMTVVGWNAAMHAASVTGEPGKALELLEEAKSKGVKPTEVTYATAIGACAKATTNVKANARXXXXXXXXXXXXXXXXXXPAHQAALTALAASEGHRAAMDLLAKMRANGTRLTSASYSPVLKSAAQVGDWRNAIALIDVMTRASVTDKDAGPDVVCFNYAMSACAKAGECE---------LAHRVMSRIQACGLAANLVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMQTSGDPALXXXXXXXXXXXXXXXXXXXWALTLWLFSEIKAAGLKADIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSMPCDETTFSAMMHGCAQTRDWDAAGRLLEEMNAAGLKPNDACYYTLLVAACRAGELRLAEGLIKGMCKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGEAEIAEILLEMMRSQGVELDDVGRSHALVAFGRGGRPDKALALMDNIRENGSPPNLQCFNGAIEACALADDIDGGMSL 1260
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig77.100.5 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JAL8_9PHAE1.090e-17365.70Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 537..663
e-value: 1.2E-7
score: 31.3
coord: 1075..1220
e-value: 6.7E-10
score: 38.6
coord: 892..1041
e-value: 5.3E-13
score: 48.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 795..953
e-value: 2.6E-43
score: 150.5
coord: 399..571
e-value: 7.6E-19
score: 70.2
coord: 122..301
e-value: 1.5E-21
score: 79.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 572..690
e-value: 2.3E-12
score: 48.6
coord: 691..794
e-value: 1.1E-27
score: 98.6
coord: 1218..1336
e-value: 4.9E-19
score: 70.4
coord: 993..1110
e-value: 7.6E-27
score: 95.8
coord: 1111..1217
e-value: 5.1E-26
score: 93.1
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 798..827
e-value: 1.8E-4
score: 21.5
coord: 1225..1282
e-value: 0.0041
score: 17.2
coord: 736..794
e-value: 9.3E-10
score: 38.4
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 190..219
e-value: 7.1E-5
score: 22.8
coord: 853..881
e-value: 3.0E-4
score: 20.8
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 715..749
e-value: 2.6E-7
score: 28.4
coord: 854..881
e-value: 1.8E-4
score: 19.5
coord: 1135..1168
e-value: 1.6E-5
score: 22.8
coord: 1244..1271
e-value: 0.0011
score: 17.0
coord: 750..783
e-value: 3.7E-5
score: 21.6
coord: 1100..1132
e-value: 3.4E-8
score: 31.2
coord: 997..1029
e-value: 1.8E-5
score: 22.6
coord: 190..222
e-value: 6.4E-8
score: 30.3
coord: 890..923
e-value: 1.8E-4
score: 19.5
coord: 926..959
e-value: 1.5E-5
score: 22.9
coord: 1169..1202
e-value: 6.5E-5
score: 20.8
coord: 1065..1093
e-value: 4.9E-4
score: 18.1
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 888..922
score: 11.388848
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 187..221
score: 10.906551
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1167..1201
score: 11.136739
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1236..1270
score: 9.20755
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 713..747
score: 11.575191
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 993..1027
score: 10.106377
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1097..1131
score: 12.802855
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1028..1062
score: 9.426776
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 923..957
score: 10.818861
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 958..992
score: 9.525427
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1132..1166
score: 10.095415
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 850..884
score: 9.821383
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 815..849
score: 10.194067
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 748..782
score: 10.972319
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availablePANTHERPTHR47932:SF12OS01G0153250 PROTEINcoord: 578..878
NoneNo IPR availablePANTHERPTHR47932:SF12OS01G0153250 PROTEINcoord: 695..1032
NoneNo IPR availablePANTHERPTHR47932:SF12OS01G0153250 PROTEINcoord: 415..683
coord: 1097..1335
coord: 136..273
NoneNo IPR availablePANTHERPTHR47932ATPASE EXPRESSION PROTEIN 3coord: 415..683
coord: 136..273
NoneNo IPR availablePANTHERPTHR47932ATPASE EXPRESSION PROTEIN 3coord: 841..1237
NoneNo IPR availablePANTHERPTHR47932:SF12OS01G0153250 PROTEINcoord: 841..1237
NoneNo IPR availablePANTHERPTHR47932ATPASE EXPRESSION PROTEIN 3coord: 695..1032
NoneNo IPR availablePANTHERPTHR47932ATPASE EXPRESSION PROTEIN 3coord: 1097..1335
coord: 578..878

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig77contigP-littoralis_Contig77:338005..354013 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig77.100.5mRNA_P-littoralis_Contig77.100.5Pylaiella littoralis U1_48mRNAP-littoralis_Contig77 337074..354609 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig77.100.5 ID=prot_P-littoralis_Contig77.100.5|Name=mRNA_P-littoralis_Contig77.100.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1341bp
MQVLHAGRHLPSHQHKHQQHRRRRGIKLNASALLLSLALLADKPERALGW
VHIALRTGGQQQGGCSPTSTSGSATPPVARLRMLHLLTLERQRSQRRLSP
RLACAADTQLGMAMPVVGRDSVDRMKEWGVKGMWKEAREQLEKEGSGGLT
PSLGAYEGAVQALAVSGKCAEAVFLLGDIKDAGLAPHEEIFGTVISACGK
AGRMEEATRTLDLMISYGCKPSQELLNTVLDTCVFGKNTGKVTNLLLKMR
AQGLDTDDYRYRQAMKACAMASDPTQVISVWKLFVGGGRLVEDVVPGDVS
RVAKAMGALGDWRSIVKLLESKTLEGGGGLPALNASSYNWLVSATWHGRG
TPDADTYFLAFRAFLKSRGRHWSAALDMFRAMQASSSTLPREDGVIEGVE
AADPSVFLTADIWCKTIATLAQGSQPRDALPAALSLMREAEEAGVEVDAA
TTDVVLAALGKAKGKDDQLLALFLGAEKRGLRLKRPSYAWAVVAYKRSGR
TREALDAALAFSERGIAMTVVGWNAAMHAASIMGQPETALKLLEEAKVKG
TKLTEVSYSTAIGACARATTDIEENARKAVSLLEEMKAAGLKPYPPAHQA
ALSAVAASEGHEAALSLLAEMRAEGTRLTAASYNPALKIAARAGDWMVAI
SAIDVMTKAAMTDFEAGPDVVSFNFAMSACAKAGESEARGAEIHLRLAHR
VLSRMQACGLAPNLVSYGICMDACSKAGMWEKALELLAEARRAGLPPNVV
AFTTAVEACAAAGKFSSALSVLDQMSSEGIDPSVVTFSSALKGCNDWDKA
EEILALMKSRAIKPNEVTYTELIGVCGRSGDVHQALAQLENARRDGLSPN
LIHYNACVDVCAKTGEVDRALALLEQMQTSGDPALKPDLVTYNSVMNACA
KAGDWALTLWLFSEIKAAGLKADIQSFNAALDACTKGSNPEAALALLKRM
KAQGLAPDAISYQSAISACRAGGDGASAVMLLKDMDRQGIEPRDAEYNLV
IETVGREGDWGGALELLESMKAQGVKPDAYTYGAAVGACAKGRNHEMTRT
LLLEMQDLGLTPTRFCWNSVISVHARTGKTTVALALMDEMKESMPCDETT
YSTVVHGCSQTRDWKAAERLLKDMRREGLKPNDACYYALLAAASKAGELR
LAEGLFKGMREDGIKPDSYSFTTLFAGCGRFHDWRLALRLLESMKSEGVT
PTKKMYVSSLRACGRGEAEVAEIFLEMMRNRRVELDVVGRAAAMVAFGRG
GRADKALGLMDEMRKNGPSPNLQCFNGAIEACALADDIDGGMTLMAEMGR
VGITPDGYSFRSLIAACNRNNKPDLKRGLREAMSKLRLED*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033443PPR_long
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat