prot_P-littoralis_Contig77.96.7 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig77.96.7
Unique Nameprot_P-littoralis_Contig77.96.7
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1111
Homology
BLAST of mRNA_P-littoralis_Contig77.96.7 vs. uniprot
Match: D7G712_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G712_ECTSI)

HSP 1 Score: 1000 bits (2586), Expect = 0.000e+0
Identity = 632/1133 (55.78%), Postives = 754/1133 (66.55%), Query Frame = 0
Query:    1 MEAMAAKNEDEATELGEKIKSSEAKGKALTRARKLLEEGDEEIVKLSAHASELDSASCSMMARIDELETSPEFSMPDGEGSAKRKELLRELGALEDGPLPELESSIAERKRLSAKAGQVLDELLSDLGVKRLEMERRDGAATLSDIELKALQERIVKMGAESAKLRAHCATQQALVGSLEARRKSQISNGTH---PPIQSNALLPR--GIACGWQSPSGARGRSSYGQGRVGALRSLMEKLREGGVGAHGMVADLILLRRQGDEAAVTAVLGSTLRNTIVVQTRKDGARVVAEVKAAGILGQVRCDVLDEIKSKPSARAGSADGVGG-GLSLLSGRVTTSDPKHFPAVEKHLRGWLLAETRQVAWDTRSGRSKSSAANVVTASGELFYASGEVAVKAPQASTSSCAPRLGVVQGGQPRGGFQGLARQHVGTH----QQVGPQESRHDVELRLKGALESLSAAETSIAELAREEAQARFDCEDGQVRHTMVQTKTEECRREVLRMEHKVSAQRRLVPGGDGSGDKDSAEDDADETQLEMLRQRRDEIVAELAEYGESEPGSQGMTRQIDASARSAAIQELRNLRAKVDNHRELRDEVEVKLHVFTKRGKTRRDRVETLKAEKKDCENLHKSTKARQLLHEEKSLTLLSAFEEAKSIYRVEREVAREAEGAARKAKRELSAIRAIGVELSHRQNILTADRRKTEANSSRMMQRLANAVRTAAEAEGPSSGDGPAQEPGDEYADKSDTVAADXXXXXXSLARELDRFTHLQSSN--KASDVNGGLESSNGGGDNNGRCRREAYDEERARGMERDFEFDCPLTSDRRDAAAAPSACGAEDETKVAAFVRLLEE-----NGGET------EFFKETGITEASIRLKEVNVKKRREALDIAAITRAARLDRDSVDLERKLEAAQESVVSLMEKKEVLEATRHATLVKCLQEVNGALGGIYRRLTSVEDPGKSSSNPTEHGKSIGKSGVRSVPGGDCFLRFSLERTLLLSEGLAVQVKPEPASPWRSPGSLSGGQVALVGLALNLATQAVRPAPLYLMDEIDAALDTHKVRRVAAMLADRARSGNEQCIVISHRPEMQERASHLVGVYHCEGTARTVSLELLPQLPPGREEDGCNQSDLP 1110
            ME++ AKN  EA +L E++KSS+ KGKALTRARK LEEG+ EI+ LSA +SEL  A   M  RIDELE SPE ++P GEG  +R+EL+REL +LE+  LPELE  IAERKR  ++AG +LD L+SD    R+EME+RDG A  S  +L+ L+ RI +M  ESAKLRAHC +QQAL+G LEARR S+ S  T    PP +S++   +  G A G QS   A GR       VGALRSL+EKLR+GGVGAHGM+ADL+LLRR  DEAAV AVLGS LRNT+VVQTRKDGARVVA V+AAGI  QVRCDVLDE+++  +            GLS LS  VTTSDP+HFPAVEKHLR WLLAETRQVAW  R   SKSSAAN+VT+SG                                            VG H    QQ G ++S H+VE+RLK ALESLS AET  AELARE AQARFDCED Q RH   Q   +EC ++VL    KVSAQRRL+  G  S       +D +E QLE LRQRR+ I+ ELAE  E + GSQ    +I+   R+A   ELRNLRAK D     R+EV VKL V TKRGK RRDRVET+  EKK  E  H+S+KA ++L  EK   L+SA E  KS Y+ +RE AREAEG+ARKAKRELS+  A  ++LS RQ  LT DR K   ++S +++ LA A RTAA A+GPSS DG   E  +   D  D+  A        L+REL+ F   Q+SN  + +D  G  +   GG   N +  R           ER    +  +T+DR            EDE  VAAFV +L+E      GG++      +F  +T I EASIRLKE +++K REA+DI A+TRA  LDR+SV LERKLEAA+ESVV LM+KKE LEATRH+TL+KCL+EVN ALGGIYRRLTS EDPG   +N   H K  GK GVR   GGDCFLRFS ER+LL SEGL+VQVKPE  SPWR PGSLSGGQVALVGLALNLATQAVRPAPLYLMDEID+ALDTHKVRRVA++LADRA+SG+EQCIVISHR EMQER SHLVGVYHC+GTARTV LEL PQ+P G +E+   Q   P
Sbjct:  278 MESILAKNNCEANQLREQMKSSKTKGKALTRARKQLEEGNVEIIALSAQSSELHLAVSGMQTRIDELERSPELNVPGGEGFDEREELVRELSSLEEDLLPELEKCIAERKRTLSQAGTLLDNLVSDASAARVEMEKRDGVAASSKNKLQDLRRRIAEMDTESAKLRAHCTSQQALIGHLEARRGSRDSADTDTRSPPAKSSSSSTKRQGGAVGRQSAPDAHGR-------VGALRSLVEKLRKGGVGAHGMLADLLLLRRSCDEAAVAAVLGSALRNTVVVQTRKDGARVVAAVRAAGINVQVRCDVLDEMRNGNAXXXXXXXXXXXQGLSPLSECVTTSDPRHFPAVEKHLRSWLLAETRQVAWGARRAPSKSSAANIVTSSG--------------------------------------------VGCHGPIQQQAGTEDSAHEVEVRLKRALESLSGAETRAAELARETAQARFDCEDAQARHASAQNSAKECLQKVLGAGQKVSAQRRLLVSGSNS----CTAEDPEEIQLEKLRQRREIILGELAETKEGDSGSQRRVERINVDTRAAVTLELRNLRAKADTESGRREEVGVKLRVLTKRGKARRDRVETITEEKKSLEAQHQSSKAEKVLLNEKIANLISALEVTKSAYQGKREAAREAEGSARKAKRELSSFEATRMDLSMRQEALTEDRHKARVDASHLVRYLAEATRTAAYADGPSSRDGLDDEADEAEEDVHDSAMA-TAEGGTRLSRELETFIFFQNSNSPRPTDGEGDDDKGRGGAPPNRKGGR----------RERSKSPEMRITADRE-----------EDEASVAAFVDVLKEATGGSGGGKSRGRGYKDFVGDTDIAEASIRLKEADLQKHREAIDITAVTRAVSLDRESVILERKLEAAKESVVDLMDKKEGLEATRHSTLIKCLEEVNEALGGIYRRLTSAEDPGNMYNNSVVHSKRFGKFGVRGATGGDCFLRFSRERSLLASEGLSVQVKPEAMSPWRGPGSLSGGQVALVGLALNLATQAVRPAPLYLMDEIDSALDTHKVRRVASILADRAQSGSEQCIVISHRAEMQERGSHLVGVYHCDGTARTVGLELHPQMPQGHDENEYEQDQRP 1333          
BLAST of mRNA_P-littoralis_Contig77.96.7 vs. uniprot
Match: A0A1V9ZUI8_9STRA (DEAD/DEAH box RNA helicase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZUI8_9STRA)

HSP 1 Score: 117 bits (293), Expect = 8.970e-23
Identity = 72/182 (39.56%), Postives = 99/182 (54.40%), Query Frame = 0
Query:  897 SVVSLMEKKEVLEATRHATLVKCLQEVNGALGGIYRRLTSVEDPGKSSSNPTEHGKSIGKSGVRSVPGGDCFLRFSLERTLLLSEGLAVQVKPEPASPWRSPGSLSGGQVALVGLALNLATQAVRPAPLYLMDEIDAALDTHKVRRVAAMLADRARSGNEQCIVISHRPEMQERASHLVGVY 1078
            ++ + ++ ++ L   RH TL   L  VN  L  I+R L  V                +G       P GDCFL FS ++T L  EG+    KP+   PWR  G LSGGQ  L  L+L LA QA    PLY+ DEIDA+LDTH V R+  +++  A  G+ Q +V+SHR EM +++S +VGVY
Sbjct: 1466 ALATAVQARQELMQERHTTLTAALDRVNAQLPAIFRSLCEVAPM-------------LG-------PDGDCFLGFSKDKTTLFGEGITFHCKPDE-QPWRHFGGLSGGQQVLCALSLLLAFQAAFACPLYVCDEIDASLDTHNVARLGQLMSRLA--GDTQFVVVSHRAEMWQQSSAMVGVY 1624          
BLAST of mRNA_P-littoralis_Contig77.96.7 vs. uniprot
Match: A0A8K1CE18_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CE18_PYTOL)

HSP 1 Score: 112 bits (280), Expect = 2.050e-21
Identity = 73/216 (33.80%), Postives = 112/216 (51.85%), Query Frame = 0
Query:  873 AITRAARLDRDSVDLERKLEAAQESVVSLMEKKEVLEATRHATLVKCLQEVNGALGGIYRRLTSVEDPGKSSSNPTEHGKSIGKSGVRSVPGGDCFLRFSLERTLLLSEGLAVQVKPEPASPWRSPGSLSGGQVALVGLALNLATQAVRPAPLYLMDEIDAALDTHKVRRVAAMLADRARSGNEQCIVISHRPEMQERASHLVGVYHCEGTARTVS 1088
            A+  A R   D +  E K+E+ +  ++ + E+++ L  TR + LV  L++VN  LG IYR L   ED                         G+C+L +SLE+     EGL    KP+  + W+    LSGGQ  +  ++L LA QA    P Y+ DEIDAALDT  V ++  +L  ++     Q +++SHRPEM E  S+LVG+Y  + +A  ++
Sbjct:  733 AVEDAMRCQEDIMLKEGKVESLRADILRMNERRDSLITTRFSRLVSALRDVNDNLGKIYRVLN--ED-------------------------GECYLGYSLEKATFFDEGLVFNCKPDE-NHWQHFVGLSGGQQVVCSVSLMLAFQASFSCPFYICDEIDAALDTINVSKLGKLLLQQSEKTKTQFLIVSHRPEMWELCSYLVGIYERDHSACAIA 920          
BLAST of mRNA_P-littoralis_Contig77.96.7 vs. uniprot
Match: T0QG37_SAPDV (SMC hinge domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QG37_SAPDV)

HSP 1 Score: 103 bits (256), Expect = 1.710e-18
Identity = 75/210 (35.71%), Postives = 106/210 (50.48%), Query Frame = 0
Query:  877 AARLDRDSVDLERKLEAAQESVVSLMEKKEVLEATRHATLVKCLQEVNGALGGIYRRLTSVEDPGKSSSNPTEHGKSIGKSGVRSVPGGDCFLRFSLERTLLLSEGLAVQVKPEPASPWRSPGSLSGGQVALVGLALNLATQAVRPAPLYLMDEIDAALDTHKVRRVAAMLADRARSGNEQCIVISHRPEMQERASHLVGVYHC--EGTA 1084
            AA +  + +D E + +   +++ + ++ +  L   R+ TL   L  +N  L  +YR L   ED                         GDC+L FSL+ T L  EG+    KP+    WR  GSLSGGQ  L  L+L L+ QA    P+++ DEIDAALDT+ V R+  +L   A +   Q IV+SHR EM  +A  LVGVY    EG+A
Sbjct:  934 AAAVRHELMDTEERAKNLAQAIATTLKARNHLMHQRYVTLTDALATLNVHLPEMYRSL--CED-------------------------GDCYLGFSLDTTTLFGEGITFHCKPDEQQ-WRPFGSLSGGQQVLCALSLLLSFQASFVCPVFICDEIDAALDTYNVERLGKLLV--AAAAKTQFIVVSHRAEMWNQAHALVGVYSVGREGSA 1113          
BLAST of mRNA_P-littoralis_Contig77.96.7 vs. uniprot
Match: A0A836BX79_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BX79_9CHLO)

HSP 1 Score: 100 bits (249), Expect = 1.520e-17
Identity = 75/214 (35.05%), Postives = 96/214 (44.86%), Query Frame = 0
Query:  912 RHATLVKCLQEVNGALGGIYRRLTSVEDPGKSSSNPTEHGKSIGKSGVRSVPGGDCFLRFSLERTLLLSEGLAVQVKPEPASPWRSPGSLSGGQVALVGLALNLATQAVRPAPLYLMDEIDAALDTHKVRRVAAMLADRARSGNE--------------------------QCIVISHRPEMQERASHLVGVYHCEG-TARTVSLELLPQLPPG 1098
            R+ TL   L   N  LG +Y  LT                             GD  L ++ +R LL   G+ ++V+P+ A  WR   +LSGGQ AL  LAL+LA QAV P+P Y  DEIDAALDT    RVA  L   +    +                          Q IV+SH+P++ ERAS LVGVY   G +A  V+  L P   PG
Sbjct: 1496 RYGTLSTALAAANRHLGRVYGTLTGGT--------------------------GDAALSYTPDRALLFMHGITLEVRPD-AHRWRPFAALSGGQQALAALALSLALQAVAPSPFYFFDEIDAALDTAAAARVADYLLTASTVNRQPPRGNGQPSTAXXXXXXXXXXXXXXXQFIVVSHKPQVFERASCLVGVYTLHGASAAVVAAGLRPAAGPG 1682          
BLAST of mRNA_P-littoralis_Contig77.96.7 vs. uniprot
Match: A0A2P6VHC4_9CHLO (RNA pseudouridine synthase 5 isoform X1 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VHC4_9CHLO)

HSP 1 Score: 99.0 bits (245), Expect = 4.030e-17
Identity = 66/186 (35.48%), Postives = 90/186 (48.39%), Query Frame = 0
Query:  908 LEATRHATLVKCLQEVNGALGGIYRRLTSVEDPGKSSSNPTEHGKSIGKSGVRSVPGGDCFLRFSLERTLLLSEGLAVQVKPEPASPWRSPGSLSGGQVALVGLALNLATQAVRPAPLYLMDEIDAALDTHKVRRVAAMLA-DRARSGN-EQCIVISHRPEMQERASHLVGVYHCEGTARTVSLEL 1091
            L+  R++     L  VN  L G+Y RLT  +                          GD +  ++ +R    ++G+   V+P+    WR   SLSGGQ AL  LAL  A QA  PAP Y  DEID ALDT    RVA  +A  + R G+  Q +V+SH+P++ ERA  LVGV      +  V+L L
Sbjct: 1419 LQDERYSRFHAALTAVNAQLAGVYGRLTGGQ--------------------------GDAYCSYTQDRLAAFADGVTFHVRPD-CQRWRPFASLSGGQQALASLALCFALQAAAPAPFYYFDEIDCALDTTNAARVAEFIAAQQQRQGSGAQYLVVSHKPQLYERAGCLVGVTSRSQASTAVTLHL 1577          
BLAST of mRNA_P-littoralis_Contig77.96.7 vs. uniprot
Match: A0A835STA3_CHLIN (SMC_N domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835STA3_CHLIN)

HSP 1 Score: 95.5 bits (236), Expect = 4.950e-16
Identity = 81/246 (32.93%), Postives = 105/246 (42.68%), Query Frame = 0
Query:  883 DSVDLERKLEAAQESVVSL-------MEKKEVLEATRHATLVKCLQEVNGALGGIYRRLTSVEDPGKSSSNPTEHGKSIGKSGVRSVPGGDCFLRFSLERTLLLSEGLAVQVKPEPASPWRSPGSLSGGQVALVGLALNLATQAVRPAPLYLMDEIDAALDTHKVRRVAAMLADRARSGNE-------------------------------------------QCIVISHRPEMQERASHLVGVY 1078
            + V L R+LEAA  +   L          +E L+  R A L   L ++NG LG IY  L+                            GGD  L ++ +R LLL+ G A++V+P+    WR   +LSGGQ AL  LAL+LA QAV P+P Y  DEID ALDT    RVA  L   + S                                              Q IV+SH+P++ ERAS LVGVY
Sbjct: 1700 EDVRLLRELEAAGAAAARLEXXXXXXXXXREALQGERFARLSVALVQLNGHLGRIYATLSGG--------------------------GGDAALAYTPDRALLLAHGAALEVRPDEHK-WRPYAALSGGQQALASLALSLALQAVAPSPFYFFDEIDCALDTAAAARVADYLCGASSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAQYIVVSHKPQVFERASCLVGVY 1918          
BLAST of mRNA_P-littoralis_Contig77.96.7 vs. uniprot
Match: E1Z715_CHLVA (SMC_N domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z715_CHLVA)

HSP 1 Score: 86.3 bits (212), Expect = 5.590e-16
Identity = 50/119 (42.02%), Postives = 68/119 (57.14%), Query Frame = 0
Query:  980 SEGLAVQVKPEPASPWRSPGSLSGGQVALVGLALNLATQAVRPAPLYLMDEIDAALDTHKVRRVAAMLADR-------ARSGNEQCIVISHRPEMQERASHLVGVYHCEGTARTVSLEL 1091
            ++G+   V+P+  S WR   SLSGGQ AL  LAL  A QA  P+P Y  DEID ALDT    RVA  +A +        +    Q +V+SHRP++ ERA  LVGVY C   +  +++ +
Sbjct:   22 ADGVTFHVRPD-RSRWRPFPSLSGGQQALATLALCFALQAAFPSPFYFFDEIDCALDTVNAARVADYIASQQQQEAGDGQGSAAQFLVVSHRPQVYERAGCLVGVYSCGRASHAITVHV 139          
BLAST of mRNA_P-littoralis_Contig77.96.7 vs. uniprot
Match: A0A1Y3N8Z4_PIRSE (SMC_N domain-containing protein n=1 Tax=Piromyces sp. (strain E2) TaxID=73868 RepID=A0A1Y3N8Z4_PIRSE)

HSP 1 Score: 87.0 bits (214), Expect = 2.690e-15
Identity = 50/118 (42.37%), Postives = 66/118 (55.93%), Query Frame = 0
Query:  980 SEGLAVQVKPEPASPWRSPGSLSGGQVALVGLALNLATQAVRPAPLYLMDEIDAALDTHKVRRVAAMLADRARSGNEQCIVISHRPEMQERASHLVGVYHCEGTARTVSLELLPQLPP 1097
            SEG+   V P P   W++  +LSGG+  L  LAL  A    +P PLY+MDEIDAALD   V  VA  + DR +  N Q I+IS R  M E A  L+G+Y      +T+++     LPP
Sbjct:   20 SEGIIFSVMP-PKKSWKNISNLSGGEKTLSSLALVFALHHYKPTPLYIMDEIDAALDFRNVSIVANYIKDRTK--NAQFIIISLRNNMFELADRLIGIYKTHNCTKTITINPTEILPP 134          
BLAST of mRNA_P-littoralis_Contig77.96.7 vs. uniprot
Match: G2YVW4_BOTF4 (SMC_N domain-containing protein n=2 Tax=leotiomyceta TaxID=716546 RepID=G2YVW4_BOTF4)

HSP 1 Score: 84.0 bits (206), Expect = 4.440e-15
Identity = 51/111 (45.95%), Postives = 66/111 (59.46%), Query Frame = 0
Query:  980 SEGLAVQVKPEPASPWRSPGSLSGGQVALVGLALNLATQAVRPAPLYLMDEIDAALDTHKVRRVAAMLADRARSGNEQCIVISHRPEMQERASHLVGVYHCEGTARTVSLE 1090
            SEG+   V P P   W++  +LSGG+  L  LAL  A    +P PLY+MDEIDAALD   V  VA+ + +R +  N Q IVIS R  M E AS LVGVY      ++V++E
Sbjct:   36 SEGILFSVMP-PKKSWKNISNLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFRNVSIVASYIKERTK--NAQFIVISLRNNMFELASRLVGVYKVNHMTKSVTIE 143          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig77.96.7 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G712_ECTSI0.000e+055.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1V9ZUI8_9STRA8.970e-2339.56DEAD/DEAH box RNA helicase n=1 Tax=Achlya hypogyna... [more]
A0A8K1CE18_PYTOL2.050e-2133.80Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
T0QG37_SAPDV1.710e-1835.71SMC hinge domain-containing protein n=1 Tax=Saprol... [more]
A0A836BX79_9CHLO1.520e-1735.05Uncharacterized protein n=1 Tax=Edaphochlamys deba... [more]
A0A2P6VHC4_9CHLO4.030e-1735.48RNA pseudouridine synthase 5 isoform X1 n=1 Tax=Mi... [more]
A0A835STA3_CHLIN4.950e-1632.93SMC_N domain-containing protein n=1 Tax=Chlamydomo... [more]
E1Z715_CHLVA5.590e-1642.02SMC_N domain-containing protein n=1 Tax=Chlorella ... [more]
A0A1Y3N8Z4_PIRSE2.690e-1542.37SMC_N domain-containing protein n=1 Tax=Piromyces ... [more]
G2YVW4_BOTF44.440e-1545.95SMC_N domain-containing protein n=2 Tax=leotiomyce... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 653..673
NoneNo IPR availableCOILSCoilCoilcoord: 604..624
NoneNo IPR availableCOILSCoilCoilcoord: 877..911
NoneNo IPR availableCOILSCoilCoilcoord: 562..589
NoneNo IPR availableCOILSCoilCoilcoord: 442..462
NoneNo IPR availableCOILSCoilCoilcoord: 514..546
NoneNo IPR availableCOILSCoilCoilcoord: 5..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 499..514
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 756..787
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 756..779
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 686..737
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 499..524
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 938..952
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 938..957
NoneNo IPR availablePANTHERPTHR43977STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3coord: 104..633
coord: 840..1084
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 884..1092
e-value: 2.5E-34
score: 120.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 583..1083
IPR010935SMCs flexible hingePFAMPF06470SMC_hingecoord: 242..358
e-value: 6.9E-9
score: 36.0
IPR003395RecF/RecN/SMC, N-terminalPFAMPF02463SMC_Ncoord: 742..1082
e-value: 9.3E-26
score: 90.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig77contigP-littoralis_Contig77:316377..326003 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig77.96.7mRNA_P-littoralis_Contig77.96.7Pylaiella littoralis U1_48mRNAP-littoralis_Contig77 316132..326694 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig77.96.7 ID=prot_P-littoralis_Contig77.96.7|Name=mRNA_P-littoralis_Contig77.96.7|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1111bp
MEAMAAKNEDEATELGEKIKSSEAKGKALTRARKLLEEGDEEIVKLSAHA
SELDSASCSMMARIDELETSPEFSMPDGEGSAKRKELLRELGALEDGPLP
ELESSIAERKRLSAKAGQVLDELLSDLGVKRLEMERRDGAATLSDIELKA
LQERIVKMGAESAKLRAHCATQQALVGSLEARRKSQISNGTHPPIQSNAL
LPRGIACGWQSPSGARGRSSYGQGRVGALRSLMEKLREGGVGAHGMVADL
ILLRRQGDEAAVTAVLGSTLRNTIVVQTRKDGARVVAEVKAAGILGQVRC
DVLDEIKSKPSARAGSADGVGGGLSLLSGRVTTSDPKHFPAVEKHLRGWL
LAETRQVAWDTRSGRSKSSAANVVTASGELFYASGEVAVKAPQASTSSCA
PRLGVVQGGQPRGGFQGLARQHVGTHQQVGPQESRHDVELRLKGALESLS
AAETSIAELAREEAQARFDCEDGQVRHTMVQTKTEECRREVLRMEHKVSA
QRRLVPGGDGSGDKDSAEDDADETQLEMLRQRRDEIVAELAEYGESEPGS
QGMTRQIDASARSAAIQELRNLRAKVDNHRELRDEVEVKLHVFTKRGKTR
RDRVETLKAEKKDCENLHKSTKARQLLHEEKSLTLLSAFEEAKSIYRVER
EVAREAEGAARKAKRELSAIRAIGVELSHRQNILTADRRKTEANSSRMMQ
RLANAVRTAAEAEGPSSGDGPAQEPGDEYADKSDTVAADAAAAAASLARE
LDRFTHLQSSNKASDVNGGLESSNGGGDNNGRCRREAYDEERARGMERDF
EFDCPLTSDRRDAAAAPSACGAEDETKVAAFVRLLEENGGETEFFKETGI
TEASIRLKEVNVKKRREALDIAAITRAARLDRDSVDLERKLEAAQESVVS
LMEKKEVLEATRHATLVKCLQEVNGALGGIYRRLTSVEDPGKSSSNPTEH
GKSIGKSGVRSVPGGDCFLRFSLERTLLLSEGLAVQVKPEPASPWRSPGS
LSGGQVALVGLALNLATQAVRPAPLYLMDEIDAALDTHKVRRVAAMLADR
ARSGNEQCIVISHRPEMQERASHLVGVYHCEGTARTVSLELLPQLPPGRE
EDGCNQSDLP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR010935SMC_hinge
IPR003395RecF/RecN/SMC_N