prot_P-littoralis_Contig77.87.4 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig77.87.4
Unique Nameprot_P-littoralis_Contig77.87.4
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length258
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig77.87.4 vs. uniprot
Match: A0A7S0DQ98_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DQ98_9EUKA)

HSP 1 Score: 57.0 bits (136), Expect = 2.930e-6
Identity = 32/82 (39.02%), Postives = 48/82 (58.54%), Query Frame = 0 
Query:  113 GVDQCLSFHPNGLAVVQLAPTHPAVGDGDSAI-VTADFDAGGCNVLESATVKGKKKRGALQLHPATVLCSVMTKGRNQYKVR 193
            G+DQ +  H NGL V+ LAP+HP +  G +AI VT D+ AG      +  V+GK K+GA+     T +C++     ++Y VR
Sbjct:   54 GLDQYVQHHTNGLIVIGLAPSHPVLQQGKTAIKVTWDYKAG------NNKVRGKHKKGAMLFEAHTCVCTIECSDGSKYCVR 129
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig77.87.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S0DQ98_9EUKA2.930e-639.02Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..84
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..37
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..53
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..84
IPR039169Protein AbitramPANTHERPTHR13651UNCHARACTERIZEDcoord: 96..194

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig77contigP-littoralis_Contig77:300133..302002 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig77.87.4mRNA_P-littoralis_Contig77.87.4Pylaiella littoralis U1_48mRNAP-littoralis_Contig77 300028..302076 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig77.87.4 ID=prot_P-littoralis_Contig77.87.4|Name=mRNA_P-littoralis_Contig77.87.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=258bp
MSDDGVSQTNKGVKRPRTQAEDLAGESPKDTDHVQEEQQQPQQHQQPQSG
GGGGGSRSRRGGRDSVANSPQAYSGISPLPQQHPRLANTDLPGCIVRQDF
HCAVLSDACGQDGVDQCLSFHPNGLAVVQLAPTHPAVGDGDSAIVTADFD
AGGCNVLESATVKGKKKRGALQLHPATVLCSVMTKGRNQYKVRLPTIVGR
GACVSWLSARGETEARHRRASFSRHVRTINSIVDRREALFQTLACCTHCS
FVAPWRR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039169Abitram