mRNA_P-littoralis_Contig77.70.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig77.70.1 vs. uniprot
Match: A0A6H5JAK5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JAK5_9PHAE) HSP 1 Score: 384 bits (985), Expect = 2.330e-126 Identity = 215/297 (72.39%), Postives = 238/297 (80.13%), Query Frame = 1
Query: 121 MGAFLATFFVFGALSIVMLLPQTVLFLAAGYACSNRIPNRLVAFAVALNLSLVTFIVGASLAFLLARSVLPPSCTRKFFRHFAILDGLDHALRHKGRRINILLRINPCAPYNALNYGLGLSSCTFRAYLQGMVGAFPYTCVAVYAGMIISSVDDINSLFTYTSTAWYCVYAAFAVACVLSCIAIVRYTSAEMKAAVRLAPAQGGDGDGIDGGHGVDHEGDFGDLPPDSTMFGTFTSRAGDDGSGEGGRNGRGG--------------MGTFDEIAVAREPLLGGPDSRSKHSPVAGR 969
M AF+ F VFGALSIVMLLPQTVLFLAAGYAC++R+ N+ +AFAVALNLSLVTFI+GAS+AFLLARSVLPPSCTRKFF+HFAIL+GLDHAL+HKGRRI LLRINP +PYNALNYGLGLSSCTFRAYLQGMVGAFP+TC+AVYAGM+ISSVDDI+SLFTYTST WYCVYAA VACV+S +AIVRYTSAEMKAAVR AP G GD +DG E +FG+LPPDSTMFGTFTSR+ GG GRGG M TFDEI VAR PLLGG D R K+ A R
Sbjct: 1 MLAFIVIFIVFGALSIVMLLPQTVLFLAAGYACADRLRNQYLAFAVALNLSLVTFIIGASIAFLLARSVLPPSCTRKFFKHFAILEGLDHALQHKGRRIIFLLRINPMSPYNALNYGLGLSSCTFRAYLQGMVGAFPFTCIAVYAGMLISSVDDIDSLFTYTSTGWYCVYAALGVACVVSFVAIVRYTSAEMKAAVRSAPRPAG-GDRVDG------EEEFGELPPDSTMFGTFTSRS----ECYGGEEGRGGNAXXXXDEKEEGEAMETFDEIVVARAPLLGG-DPRRKNGVAAER 285
BLAST of mRNA_P-littoralis_Contig77.70.1 vs. uniprot
Match: A0A7S2MII1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MII1_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 1.100e-14 Identity = 65/191 (34.03%), Postives = 101/191 (52.88%), Query Frame = 1
Query: 49 VDLFTTCYALHATEDFLIWVDG---EDMGAFLATFFVFGALSIVMLLPQTVLFLAAGYACSNRIPNRLVAFAVALNLSLVTFIVGASL----AFLLARSVLPP---SCTRKFFRHFAILDGLDHALRHKGRRINILLRINPCAPYNALNYGLGLSSCTFRAYLQGMVGAFPYTCVAVYAGMIISSVDDINS 591
VD T+ + A E FL W++ E + AF+ +FV + ++ P +L L AG+ +N + L + L+ VGAS AFL+ R +L T+K+ AI + +D AL+ KG RI ILLR++P P+NALNY +G++S +FR + M+G P T + V+ G S+ D +S
Sbjct: 48 VDFATSKHLRTAMESFLNWIEDNPTEGVFAFMGVYFV----ATILFAPGLILTLGAGFVFANALGLGL-----GVVLATTAVFVGASTGSMAAFLIGRYLLRDWVVGLTKKY----AIFEAVDVALKEKGLRIMILLRLSPLIPFNALNYIVGVTSVSFRDFTIAMIGILPGTLLYVFLGSSAGSLTDSSS 225
BLAST of mRNA_P-littoralis_Contig77.70.1 vs. uniprot
Match: A0A7S4W131_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W131_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 2.560e-14 Identity = 56/181 (30.94%), Postives = 90/181 (49.72%), Query Frame = 1
Query: 49 VDLFTTCYALHATEDFLIWVDGEDMGAFLATFFVFGALSIVMLLPQTVLFLAAGYACSNRIPNRLVAFAVALNLSLVTFIVGASLAFLLARSVLPPSCTRKFFRHFAILDGLDHALRHKGRRINILLRINPCAPYNALNYGLGLSSCTFRAYLQGMVGAFPYTCVAVYAGMIISSVDDINS 591
+DL TT + DFL W++ A V+ ++ + +P +L L AG+ +N + + F + + F GA +FL+ R +L C K + I + +D AL+ KG RI ILLR++P P+N NY G++S + R Y GM+G P T + + G S+ D +S
Sbjct: 45 IDLATTKNTMRIVADFLDWIEDNPAAGVFAFIGVY-IIASIFFIPGLILTLGAGFVFANALGLGVGIFLATVAVFFGAFF-GACASFLIGRYLLR-DCVGKLTKKRVIFEAIDAALKDKGLRIMILLRVSPLVPFNVFNYVAGVTSISLRDYAIGMIGILPGTLLYILLGSSAGSLVDSSS 222
BLAST of mRNA_P-littoralis_Contig77.70.1 vs. uniprot
Match: A0A356IGC1_9BACT (TVP38/TMEM64 family membrane protein n=2 Tax=root TaxID=1 RepID=A0A356IGC1_9BACT) HSP 1 Score: 74.3 bits (181), Expect = 3.460e-11 Identity = 51/161 (31.68%), Postives = 86/161 (53.42%), Query Frame = 1
Query: 94 FLIWVDGEDMGAFLATFFVFGALSIVMLLPQTVLFLAAGYACSNRIPNRLVAFAVALNLSLVTFIVGASLAFLLARSVLPPSCTRKFFRHFAILDGLDHALRHKGRRINILLRINPCAPYNALNYGLGLSSCTFRAYLQGMVGAFPYTCVAVYAGMIISSV 576
FL+W+D + A + V+ A ++ + P ++L + AG A + F V +G++LAF++AR + + R+ R + +D A+ +G +I +LLR++P P+N LNY LGL++ TFRAY+ G +G P + V Y GM+ V
Sbjct: 47 FLLWIDTLGVWAPVTFVLVYVAATLTFV-PGSLLTMTAG-ALFGLVEGAFYTF--------VGATIGSALAFVIARYLARDAIQRRLVR-YPKFAAIDQAVGLEGFKIVLLLRLSPVFPFNFLNYALGLTTVTFRAYMLGAIGMLPASVVYAYYGMLAGDV 196
BLAST of mRNA_P-littoralis_Contig77.70.1 vs. uniprot
Match: A0A2D9M431_9GAMM (TVP38/TMEM64 family membrane protein n=1 Tax=Woeseiaceae bacterium TaxID=2026806 RepID=A0A2D9M431_9GAMM) HSP 1 Score: 72.0 bits (175), Expect = 2.110e-10 Identity = 52/160 (32.50%), Postives = 84/160 (52.50%), Query Frame = 1
Query: 97 LIWVDGEDMGAFLATFFVFGALSIVMLLPQTVLFLAAGYACSNRIPNRLVAFAVALNLSLVTFIVGASLAFLLARSVLPPSCTRKFFRHFAILDGLDHALRHKGRRINILLRINPCAPYNALNYGLGLSSCTFRAYLQGMVGAFPYTCVAVYAGMIISSV 576
L+WVD + A ATF + + + +P ++L + AG A + F V +G++LAFL AR + + R+ R + +D A+ +G +I +LLR++P P+N LNY LGL++ TFRAY+ +G P + V Y GM++ V
Sbjct: 48 LLWVDTLGVWA-PATFVLAYVAATLTFVPGSLLTMTAG-AVFGLVEGAFYTF--------VGATIGSALAFLTARYLARDAIQRRLVR-YPKFAAIDKAVGLEGFKIVLLLRLSPVFPFNFLNYALGLTTVTFRAYMLAAIGMLPGSVVYAYYGMLVGDV 196
BLAST of mRNA_P-littoralis_Contig77.70.1 vs. uniprot
Match: A0A2E6NJE3_9BACT (TVP38/TMEM64 family membrane protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2E6NJE3_9BACT) HSP 1 Score: 71.6 bits (174), Expect = 2.850e-10 Identity = 36/96 (37.50%), Postives = 59/96 (61.46%), Query Frame = 1
Query: 289 VGASLAFLLARSVLPPSCTRKFFRHFAILDGLDHALRHKGRRINILLRINPCAPYNALNYGLGLSSCTFRAYLQGMVGAFPYTCVAVYAGMIISSV 576
+G++ AF++AR + + R+ R + +D A+ KG +I +LLR++P P+N LNY LGL++ TFRAY+ G +G P + V Y GM+ +
Sbjct: 102 IGSAFAFVIARYLARDAIQRRLVR-YPKFAAIDQAVGLKGFKIVLLLRLSPVFPFNFLNYALGLTTVTFRAYMLGAIGMLPGSVVYAYYGMLAGDI 196
BLAST of mRNA_P-littoralis_Contig77.70.1 vs. uniprot
Match: A0A6I2HA06_9DELT (TVP38/TMEM64 family membrane protein n=2 Tax=Cystobacterineae TaxID=80811 RepID=A0A6I2HA06_9DELT) HSP 1 Score: 70.5 bits (171), Expect = 3.370e-10 Identity = 54/159 (33.96%), Postives = 84/159 (52.83%), Query Frame = 1
Query: 124 GAFLATFFVFGALSIVMLLPQTVLFLAAGYACSNRIPNRLVAFAVALNLSLVTFIVGASLAFLLARSVLPPSCTRKFFRH--FAILDGLDHALRHKGRRINILLRINPCAPYNALNYGLGLSSCTFRAY-LQGMVGAFPYTCVAVYAGMIISSVDDINS 591
GA A + L+ V+L+P +VL LAAG+A LV +V ++GA AF+L R+VL R+ FA +D A+ +G ++ +LLR++P P+N LNY LGL+ Y L ++G FP T + VY G +++S ++ S
Sbjct: 6 GAGAALYVAAYVLACVLLIPGSVLTLAAGFAYGPVQGTLLV---------MVASMLGAMAAFVLGRTVLRGPIERRLASQPRFA---AVDRAVGAQGFKVVLLLRLSPLFPFNLLNYALGLTRVRLGTYALASLIGMFPGTLLYVYLGSLVTSAAELAS 152
BLAST of mRNA_P-littoralis_Contig77.70.1 vs. uniprot
Match: A0A1R2BPE8_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BPE8_9CILI) HSP 1 Score: 68.9 bits (167), Expect = 3.390e-9 Identity = 48/164 (29.27%), Postives = 80/164 (48.78%), Query Frame = 1
Query: 103 WVDGEDMGAF--LATFFVFGALSIVMLLPQTVLFLAAGYACSNRIPNRLVAFAVALNLSLVTF--IVGASLAFLLARSVLPPSCTRKFFRHFAILDGLDHALRHKGRRINILLRINPCAPYNALNYGLGLSSCTFRAYLQGMVGAFPYTCVAVYAGMIISSVDD 582
W+ +G L F+FG I +++P T+ G C N + L F + L +V F + G++LAF+L+R +L S + AL KG R+ +L R+ P P++ LNY LG SS + +AY+ G +G P + +Y + + S+ +
Sbjct: 48 WIYERPVGGMILLMVCFIFG---ITIMIPTTLFIFTIGMQCHNLMGGILGYF---IGLLMVYFCTLCGSTLAFILSRYLLKESLLNSIKPSMVKTRAILKALETKGFRLVLLFRLAPIFPFSLLNYALGASSVSLKAYVLGSIGLIPKQALYMYVAVSVGSLSE 205
BLAST of mRNA_P-littoralis_Contig77.70.1 vs. uniprot
Match: A0A2E4BYH3_9BACT (TVP38/TMEM64 family membrane protein (Fragment) n=2 Tax=root TaxID=1 RepID=A0A2E4BYH3_9BACT) HSP 1 Score: 67.0 bits (162), Expect = 4.230e-9 Identity = 50/154 (32.47%), Postives = 80/154 (51.95%), Query Frame = 1
Query: 97 LIWVDGEDMGAFLATFFVFGALSIVMLLPQTVLFLAAGYACSNRIPNRLVAFAVALNLSLVTFIVGASLAFLLARSVLPPSCTRKFFRHFAILDGLDHALRHKGRRINILLRINPCAPYNALNYGLGLSSCTFRAYLQGMVGAFPYTCVAVYAG 558
L+WVD + A ATF + + + +P ++L + AG A + F V +G++LAFL AR + + R+ R + +D A+ +G +I +LLR++P P+N LNY LGL++ TFRAY+ +G P + V Y G
Sbjct: 48 LLWVDTLGVWA-PATFVLAYVAATLTFVPGSLLTMTAG-AVFGLVEGAFYTF--------VGATIGSALAFLTARYLARDAIQRRLVR-YPKFAAIDKAVGLEGFKIVLLLRLSPVFPFNFLNYALGLTTVTFRAYMLAAIGMLPGSVVYAYYG 190
BLAST of mRNA_P-littoralis_Contig77.70.1 vs. uniprot
Match: A0A521GTF5_9BACT (TVP38/TMEM64 family membrane protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A521GTF5_9BACT) HSP 1 Score: 65.9 bits (159), Expect = 2.240e-8 Identity = 54/168 (32.14%), Postives = 82/168 (48.81%), Query Frame = 1
Query: 91 DFLIWVDGEDMGAFLATFFVFGALSIVMLLPQTVLFLAAGYACSNRIPNRLVAFAVALNLSLVTFIVGASLAFLLARSVLPPSCTRKFFRHFAILDGLDHALRHKGRRINILLRINPCAPYNALNYGLGLSSCTFRAYLQG-MVGAFPYTCVAVYAGMIISSVDDINS 591
+F+ WV G + L V+ A ++ +L+P + L LA G+ + +V+ A +VGA++AFLLAR++L +KF LD A+ G +I IL R++P P+ LNY GL+ Y+ G VG P T + VY G + V I S
Sbjct: 27 EFVEWVRGRGVLGALLIGLVYVA-AVALLVPASALTLAIGFIYGPVVGTAIVSPA---------SVVGATVAFLLARTLLRKPVEQKFGAS-PRFKALDRAIEKDGLKILILTRLSPVIPFGPLNYLFGLTRMPLLPYVLGSFVGMLPGTFLYVYLGSTLEDVSQIVS 183 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig77.70.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig77.70.1 >prot_P-littoralis_Contig77.70.1 ID=prot_P-littoralis_Contig77.70.1|Name=mRNA_P-littoralis_Contig77.70.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=299bp MGAFLATFFVFGALSIVMLLPQTVLFLAAGYACSNRIPNRLVAFAVALNLback to top mRNA from alignment at P-littoralis_Contig77:261017..264309- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig77.70.1 ID=mRNA_P-littoralis_Contig77.70.1|Name=mRNA_P-littoralis_Contig77.70.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3293bp|location=Sequence derived from alignment at P-littoralis_Contig77:261017..264309- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig77:261017..264309- >mRNA_P-littoralis_Contig77.70.1 ID=mRNA_P-littoralis_Contig77.70.1|Name=mRNA_P-littoralis_Contig77.70.1|organism=Pylaiella littoralis U1_48|type=CDS|length=897bp|location=Sequence derived from alignment at P-littoralis_Contig77:261017..264309- (Pylaiella littoralis U1_48)back to top |