mRNA_P-littoralis_Contig77.68.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig77.68.1 vs. uniprot
Match: D7G705_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G705_ECTSI) HSP 1 Score: 277 bits (708), Expect = 1.420e-90 Identity = 142/220 (64.55%), Postives = 163/220 (74.09%), Query Frame = 1
Query: 196 MSDAVWTARVKLRAIMKEDMPQYNE----------FWEKHAQGFSTWWKGLSAAERREILSMPVNEVSAAFQGKYDLRGAYSVVMSAVNEQVRNFDKTGIKGDSRTAAELSFEESLKVDRGAYVGKMFVSDTHAKQFFDLCKQVGGPRLLPSKPRGRGADLSLESNGPVASVHRPSSQDVNNVEVDATKTEGQSFRADRRLVRLVVFRYMFDKAIRKYRA 825
MSD VWTARVKLRA MK +MP+Y+E FW KHAQ FS WW L A E R LSMPV+EV FQG YDLRGAY VVMSAVN+Q+RNFDKTGIKGD RTAAELSFEE LKV RGAY+G FV DT A FFD+C+QVGGPRLLPSKPR G S + +S +++ V+ E+ + +TEGQSFRADRRL+RLVVFRYMFDKAIRK++A
Sbjct: 1 MSDEVWTARVKLRAAMKGEMPRYHEVLAGMIPVHEFWGKHAQKFSEWWTRLPAEEARRTLSMPVDEVPVIFQGTYDLRGAYFVVMSAVNDQLRNFDKTGIKGDGRTAAELSFEEGLKVHRGAYLGGAFVKDTQADHFFDMCRQVGGPRLLPSKPRDHGTATSSKKEVLTSSAADSANERVDFAEIGSAETEGQSFRADRRLIRLVVFRYMFDKAIRKFQA 220
BLAST of mRNA_P-littoralis_Contig77.68.1 vs. uniprot
Match: A0A7S3LHQ5_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LHQ5_9STRA) HSP 1 Score: 204 bits (518), Expect = 8.520e-61 Identity = 109/273 (39.93%), Postives = 145/273 (53.11%), Query Frame = 1
Query: 22 GQFTDAWIVDRALFEHLSGGACSCCGITR--QERGALMQGCSDIETDDGRQEGKSPWPAAMSDAVWTARVKLRAIMKEDMPQYNEFWEKHAQGFSTWWKGLSAAERREILSMPVNEVSAAFQGKYDLRGAYSVVMSAVNEQVRNFDKTGIKGDSRTAAELSFEESLKVDRGAYV--GKMFVSDTHAKQFFDLCKQVGGPRLLPSKPRGR---GADLSLESNGPVASVHRPSSQDVNNVEVDATKTEGQSFRADRRLVRLVVFRYMFDKAIRKY 819
G+F D W+VDR +FE ++ G CSCCG E M CSD+ETDDG+ E KSPWP M D VW RVK R IMK+++ +Y + E H Q F WW R+ MP E+ F ++ + AY VV+ +V EQV F+ TG K D T E FEESL+V RGA+V + + FF + Q+GG LLP +PR + A + + GP + QSFR DRRLVRL++FRY D+A +K+
Sbjct: 4 GRFLDTWVVDRVMFEFVNQGGCSCCGFQHGGMEMSDFMALCSDVETDDGKTEKKSPWPKFMQDEVWADRVKFRRIMKKEITKYKKLSEAHGQDFVQWWLDADEKTRKSCFMMPKEELKVQFNTVFEFKTAYQVVLCSVLEQVEKFEATGYKLDGATDCENYFEESLRVYRGAWVVTEDYYTTLEGCDNFFGMLLQLGGDHLLPKRPRDKRAVAARAKVLAEGPTDDNSXXXXXXXXXXXXXXASSSAQSFRGDRRLVRLMIFRYYADQAWKKF 276
BLAST of mRNA_P-littoralis_Contig77.68.1 vs. uniprot
Match: A0A5D6YQ28_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YQ28_9STRA) HSP 1 Score: 188 bits (478), Expect = 2.210e-55 Identity = 100/269 (37.17%), Postives = 152/269 (56.51%), Query Frame = 1
Query: 25 QFTDAWIVDRALFEHLSGGACSCCGITR--QERGALMQGCSDIETDDGRQEGKSPWPAAMSDAVWTARVKLRAIMKEDMPQYNEFWEKHAQGFSTWWKGLSAAERREILSMPVNEVSAAFQGKYDLRGAYSVVMSAVNEQVRNFDKTGIKGDSRTAAELSFEESLKVDRGAYV--GKMFVSDTHAKQFFDLCKQVGGPRLLPSKPRGRGADLSLESNGPVASVHRPSSQDVNNVEVDATKTEGQSFRADRRLVRLVVFRYMFDKAIRKY 819
++ D W+VDR +FE+++ G CSCCG+T + CSD ETDD R+E SPWP+ + + + T R +LR MK+DM +Y F + H +GF+ WWK L + + + + +V A F+ + ++G+Y +V+ AV +QV++F TG + D R E+ FE++L+ RG +V + S A FF++ +GGP+LLP V S PS + E ++ QSFR+DRRLVRLV+FR D AIRK+
Sbjct: 3 KYEDCWVVDRTMFEYVNQGGCSCCGVTHAIMDLATFADKCSDWETDDERKEQMSPWPSFIHEEILTERARLRVAMKDDMKRYKAFADAHMEGFAEWWKRLDESGKLRVFQLSDEDVLAFFRLQARVKGSYDIVLCAVLKQVKHFQDTGYR-DGRIGPEIFFEKALQYRRGVFVVANEYMASPEGAANFFEMLTVLGGPKLLP-----------------VRSTRDPSEKSEAEEEQAKSEANVQSFRSDRRLVRLVIFRKFADIAIRKF 253
BLAST of mRNA_P-littoralis_Contig77.68.1 vs. uniprot
Match: A0A225VF63_9STRA (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=A0A225VF63_9STRA) HSP 1 Score: 185 bits (470), Expect = 3.520e-54 Identity = 96/268 (35.82%), Postives = 151/268 (56.34%), Query Frame = 1
Query: 25 QFTDAWIVDRALFEHLSGGACSCCGITR--QERGALMQGCSDIETDDGRQEGKSPWPAAMSDAVWTARVKLRAIMKEDMPQYNEFWEKHAQGFSTWWKGLSAAERREILSMPVNEVSAAFQGKYDLRGAYSVVMSAVNEQVRNFDKTGIKGDSRTAAELSFEESLKVDRGAYVGKMFVS-DTHAKQFFDLCKQVGGPRLLPSKPRGRGADLSLESNGPVASVHRPSSQDVNNVEVDATKTEGQSFRADRRLVRLVVFRYMFDKAIRKY 819
++ D W+VDR +FE+++ G CSCCG+T CSD E+DD ++E SPWP + + + T R +LR MK DM +Y +F + H +GF WW L + I +PV+EV + F+ + ++G+Y +++ A+ EQ+R+F++TG D R AAEL FE++L + ++ + FF++ K +GGP+LLP V + P+ + E +++ QSFR+DRRLVRLV+FR D A+RKY
Sbjct: 3 KYEDTWVVDRTMFEYVNQGGCSCCGVTHTIMNFADFASKCSDWESDDEKKEHYSPWPMFIHEEILTERARLRMAMKADMNKYKDFVDTHMKGFMAWWSRLGENAKTRIFQLPVDEVLSYFRVQTKVKGSYEILLCAILEQIRHFNETGYS-DGRVAAELFFEKNLHQRESFVLDSQYIGMEAGDMNFFEMMKILGGPKLLP-----------------VRTTRNPNEKSEAEAEQAKSESNVQSFRSDRRLVRLVMFRIFADMAMRKY 252
BLAST of mRNA_P-littoralis_Contig77.68.1 vs. uniprot
Match: A0A8K1CD15_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CD15_PYTOL) HSP 1 Score: 184 bits (468), Expect = 9.390e-54 Identity = 102/269 (37.92%), Postives = 152/269 (56.51%), Query Frame = 1
Query: 25 QFTDAWIVDRALFEHLSGGACSCCGITRQ--ERGALMQGCSDIETDDGRQEGKSPWPAAMSDAVWTARVKLRAIMKEDMPQYNEFWEKHAQGFSTWWKGLSAAERREILSMPVNEVSAAFQGKYDLRGAYSVVMSAVNEQVRNFDKTGIKGDSRTAAELSFEESLKVDRGAYV--GKMFVSDTHAKQFFDLCKQVGGPRLLPSKPRGRGADLSLESNGPVASVHRPSSQDVNNVEVDATKTEGQSFRADRRLVRLVVFRYMFDKAIRKY 819
+F D W+VDR +FE+++ G CSCCG+T Q + L CSD E+DD ++E SPWP + + + T R +LR +MKEDM QY F + H +GFS WW+ L + + + +P +V F+ ++G+Y +V+ AV EQ+R+F++TG K D R E E+ L+ R +V K S A F ++ + +GGP+LLP L L + P+ + EV + QSFR+DRRL+RLV+FR D A+RKY
Sbjct: 3 KFEDCWVVDRTMFEYVNQGGCSCCGVTHQIMDVAQLADRCSDWESDDEKKEQFSPWPTFIHEEILTERARLRVVMKEDMRQYKAFIDTHMKGFSAWWQQLDESTKNRVFQVPDEDVMDYFKSHAKVKGSYEIVLCAVMEQLRHFNETGYK-DGRIPPECCAEQYLQNRRSCFVMDPKYVASADGAVNFCEIMQILGGPKLLP---------LRLTRD--------PAQNNQAEQEVAQSVANVQSFRSDRRLLRLVIFRKFADVAMRKY 253
BLAST of mRNA_P-littoralis_Contig77.68.1 vs. uniprot
Match: A0A2R5GD26_9STRA (Histone-lysine N-methyltransferase setd3 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GD26_9STRA) HSP 1 Score: 194 bits (493), Expect = 1.030e-53 Identity = 113/290 (38.97%), Postives = 150/290 (51.72%), Query Frame = 1
Query: 22 GQFTDAWIVDRALFEHLSGGACSCCGITRQERGA--LMQGCSDIETDDGRQEGKSPWPAAMSDAVWTARVKLRAIMKEDMPQYNEFWEKHAQGFSTWWKGLSAAERREILSMPVNEVSAAFQGKYDLRGAYSVVMSAVNEQVRNFDKTGIKGDSRTAAELSFEESLKVDRGAY-VGKMFVS-DTHAKQFFDLCKQVGGPRLLPSKP-----RGRGADLSLESNGPVASVHRPSSQDVNNVEVD--------------ATKTEGQSFRADRRLVRLVVFRYMFDKAIRKYR 822
G+F D W+VDR +FE ++ G C+CCG T G M CSD+ETDDGR E +SPWP M + VW RVK R ++KE M Y E +E+H F TWW L ER+ MP E+ F YD + AY VV+ +V EQV NF TG K D T E+ E L RGA+ V +V+ D FF + Q+GG LLP +P + A S+E G + S+ D +T + QSFR DRRLVR+++FRY D A +++
Sbjct: 357 GRFLDTWVVDRVMFEFVNQGGCNCCGFTHGGMGMQDFMALCSDVETDDGRTERRSPWPPFMQNEVWADRVKFRRMLKETMGIYRERFEQHGADFVTWWLELDPKERKRCFMMPKEELRVQFNSTYDFQTAYQVVLCSVLEQVENFPSTGYKNDGGTDCEVFLETHLGTKRGAWTVADAYVNTDEGCDMFFGMLMQLGGDHLLPKRPTESRKQAAQAKRSVEEAGKDLD-QKVSADDXXXXXXXXXXXXXXXXADRKKSTDSGTQSFRGDRRLVRVLIFRYFADMAWTRFK 645
BLAST of mRNA_P-littoralis_Contig77.68.1 vs. uniprot
Match: K3W812_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W812_GLOUD) HSP 1 Score: 183 bits (464), Expect = 3.240e-53 Identity = 98/269 (36.43%), Postives = 149/269 (55.39%), Query Frame = 1
Query: 25 QFTDAWIVDRALFEHLSGGACSCCGITR--QERGALMQGCSDIETDDGRQEGKSPWPAAMSDAVWTARVKLRAIMKEDMPQYNEFWEKHAQGFSTWWKGLSAAERREILSMPVNEVSAAFQGKYDLRGAYSVVMSAVNEQVRNFDKTGIKGDSRTAAELSFEESLKVDRGAYV--GKMFVSDTHAKQFFDLCKQVGGPRLLPSKPRGRGADLSLESNGPVASVHRPSSQDVNNVEVDATKTEGQSFRADRRLVRLVVFRYMFDKAIRKY 819
++ D W+VDR +FE+++ G CSCCG+T + + + CSD ETDD ++E SPWP+ + + + T R +LR MK+DM Y F + H GF+ WWK L + + M EV F+ ++G+Y +V+ A+ +QV++F +TG + D R +AE+ FE+ L+ RG ++ K S A F + + +GGP+LLP V P+ + E ++ QSFR+DRRLVRLV+FR D AIRKY
Sbjct: 3 KYEDCWVVDRTMFEYVNQGGCSCCGVTHAIMDLASFAEKCSDWETDDEKKEKFSPWPSFIHEEILTERARLRVAMKDDMKSYKHFIDTHLPGFAEWWKRLDETGKARVFQMTDEEVMDFFRIHARVKGSYDIVLCAIMKQVKHFAETGYR-DGRISAEMYFEQFLQNRRGVFLMDSKYINSPEGAANFIQMLQVLGGPKLLP-----------------VRQTRDPNEKTEAEAEQAKSEANVQSFRSDRRLVRLVIFRKFADIAIRKY 253
BLAST of mRNA_P-littoralis_Contig77.68.1 vs. uniprot
Match: A0A2D4C6E1_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6E1_PYTIN) HSP 1 Score: 179 bits (453), Expect = 9.110e-52 Identity = 96/271 (35.42%), Postives = 152/271 (56.09%), Query Frame = 1
Query: 25 QFTDAWIVDRALFEHLSGGACSCCGITRQ--ERGALMQGCSDIETDDGRQEGKSPWPAAMSDAVWTARVKLRAIMKEDMPQYNEFWEKHAQGFSTWWKGLSAAERREILSMPVNEVSAAFQGKYDLRGAYSVVMSAVNEQVRNFDKTGIKGDSRTAAELSFEESLKVDRGAY-VGKMFVSDTHAK-QFFDLCKQVGGPRLLPSKPRGRGADLSLESNGPVASVHRPSSQDVNNVEVDATKTEG--QSFRADRRLVRLVVFRYMFDKAIRKY 819
+F D W+VDR +FE+++ G CSCCG+T Q + + ++ CSD E+D+ + E SPWP + + + T R +LR +MK+D+ +Y F H +GF WW+ L A + + +P +++ F ++G+Y +V+ AV EQ+R+F +TG K D R AE FE L+ + + +++ T A FF++ + +GGPRLLP + S++D N E + K+ QSFR+DRRLVRL + R D AIR+Y
Sbjct: 3 RFDDCWVVDRTMFEYVNQGGCSCCGVTHQIMDVASFVERCSDWESDEEKNETLSPWPVFIHEEILTERARLRIVMKDDIERYKSFLATHMKGFMAWWQQLDAGGKTRVFQVPDDDLLDYFHTHVKVKGSYEIVLCAVLEQLRHFKETGYK-DGRVNAECYFERFLQNRASCFTMDPSYINSTEANANFFEMLRLLGGPRLLPIR-------------------QTQSAEDNNQAEQEVIKSVSNVQSFRSDRRLVRLAIVRKFADIAIRRY 253
BLAST of mRNA_P-littoralis_Contig77.68.1 vs. uniprot
Match: D0NRX8_PHYIT (Uncharacterized protein n=49 Tax=Phytophthora TaxID=4783 RepID=D0NRX8_PHYIT) HSP 1 Score: 174 bits (442), Expect = 4.840e-50 Identity = 96/269 (35.69%), Postives = 148/269 (55.02%), Query Frame = 1
Query: 25 QFTDAWIVDRALFEHLSGGACSCCGITR--QERGALMQGCSDIETDDGRQEGKSPWPAAMSDAVWTARVKLRAIMKEDMPQYNEFWEKHAQGFSTWWKGLSA-AERREILSMPVNEVSAAFQGKYDLRGAYSVVMSAVNEQVRNFDKTGIKGDSRTAAELSFEESLKVDRGAYVGKMFVSDTHA-KQFFDLCKQVGGPRLLPSKPRGRGADLSLESNGPVASVHRPSSQDVNNVEVDATKTEGQSFRADRRLVRLVVFRYMFDKAIRKY 819
++ D W+VDR +FE+++ G CSCCG+T CSD ETDD +E SPWP + + + T R +LR MK DM +Y +F + H +GF WW L A+ R++ + + + F+ + ++G+Y +++ A+ EQ+R+F +TG D R AAEL FE++L + ++++ K FF++ K +GGP+LLP V + P+ E ++ QSFR+DRRLVRLV+FR D AIRKY
Sbjct: 3 KYEDTWVVDRTMFEYVNQGGCSCCGVTHTIMNLAEFASKCSDWETDDENKEQFSPWPTFIHEEILTERARLRVAMKADMNKYKDFVDTHMKGFMDWWSRLGENAKARQVRT--TYDFALYFRVQTKVKGSYEILLCAILEQIRHFQETGYT-DGRVAAELFFEKNLHQRESFVLDSQYIANEAGDKNFFEMLKILGGPKLLP-----------------VRTARNPNENTEAEAEQAKSENNVQSFRSDRRLVRLVLFRIFADMAIRKY 251
BLAST of mRNA_P-littoralis_Contig77.68.1 vs. uniprot
Match: A0A1V9YNR0_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YNR0_9STRA) HSP 1 Score: 164 bits (416), Expect = 1.800e-46 Identity = 92/269 (34.20%), Postives = 130/269 (48.33%), Query Frame = 1
Query: 28 FTDAWIVDRALFEHLSGGACSCCGITR--QERGALMQGCSDIETDDGRQEGKSPWPAAMSDAVWTARVKLRAIMKEDMPQYNEFWEKHAQGFSTWWKGLSAAERREILSMPVNEVSAAFQGKYDLRGAYSVVMSAVNEQVRNFDKTGIKGDSRTAAELSFEESLKVDRGAYV--GKMFVSDTHAKQFFDLCKQVGGPRLLPSKPRGRGADLSLESNGPVASVHRPSSQDVNNVEVDATKTEGQSFRADRRLVRLVVFRYMFDKAIRKYR 822
F DAW+VD+ +FE++S G CSCCG+T AL CSD ETDD +E SPWP + + V T R +R +K MP Y FW + FS WW + + + + +V + D+ G YS+V++ V EQ++ FD+TG D R AEL+FE L+ ++GA+ S F L + +GGPRLLPS SFR+DRR+VR+V+ R D IRK++
Sbjct: 3 FQDAWVVDKTMFEYVSQGGCSCCGLTTAMMNFAALADLCSDWETDDEERESFSPWPTFIHEDVQTQRALIRLRLKAHMPAYTTFWADYGDAFSQWWDAQAPTTKYRLFQLQDADVKSYVHTHGDVHGPYSIVLATVTEQIKQFDQTGYS-DGRVPAELAFERHLRFEKGAFTLDAAYLASTDPTSNFCALVQHLGGPRLLPS----------------------------------------HSFRSDRRVVRIVLARIFADSVIRKFK 230 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig77.68.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig77.68.1 >prot_P-littoralis_Contig77.68.1 ID=prot_P-littoralis_Contig77.68.1|Name=mRNA_P-littoralis_Contig77.68.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=275bp MSSFFVDGQFTDAWIVDRALFEHLSGGACSCCGITRQERGALMQGCSDIEback to top mRNA from alignment at P-littoralis_Contig77:246470..250059- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig77.68.1 ID=mRNA_P-littoralis_Contig77.68.1|Name=mRNA_P-littoralis_Contig77.68.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3590bp|location=Sequence derived from alignment at P-littoralis_Contig77:246470..250059- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig77:246470..250059- >mRNA_P-littoralis_Contig77.68.1 ID=mRNA_P-littoralis_Contig77.68.1|Name=mRNA_P-littoralis_Contig77.68.1|organism=Pylaiella littoralis U1_48|type=CDS|length=825bp|location=Sequence derived from alignment at P-littoralis_Contig77:246470..250059- (Pylaiella littoralis U1_48)back to top |