mRNA_P-littoralis_Contig77.50.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig77.50.1
Unique NamemRNA_P-littoralis_Contig77.50.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig77.50.1 vs. uniprot
Match: A0A6H5KNV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNV1_9PHAE)

HSP 1 Score: 355 bits (911), Expect = 2.240e-114
Identity = 209/416 (50.24%), Postives = 244/416 (58.65%), Query Frame = 3
Query:  114 SCFNRILDCDTADDSNDHLDQSSALLLHDAELVDRPHEAKTFWLPAGACPTTSLEKIAKAVFDFHSKNLGHNQHLHPHQDSPDATP-GSTPRSAAACNSKRWGDGRAPHGGMSPTVA--TSPQAGYEESGAEWWVQRRQEGRHEDLGMPFHWDKDEKMLDQEGVVVCPAVSTVTYLTEDGAPTVVVECRATERGVVDQGDIERALVSYPALFKHLAFDGGFLHGVPEQLMRPGHNYVEEHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR-RMRVTLLVNVWLSHKPKGVEPLPATIAAALSCGDLSAQPSLCFDRPAAFAPVSIHEEIHTPPLLQQEEAGIPVRDTRGRTMVIQAPLGPTLSLEMQIPTPQRLSMGDLKALHSFALVYREGCFPRVKARNKVKVGAVA 1349
            SC+ R++     D            LL D EL+D PHEAKTFWLPA ACP TSLE+IAKA++DFH  N    QH H HQDS    P GSTP + A         G  P       V    S   G  ESGAEWWVQ+R+EGRH  +GMPFHWDKDE+ML+QEG+VVCP+VSTVTYLT  GAPTVV+E RAT  G V +GDI +  VSYPALFKHLAFDGGFLHGVPEQLMR G   V   G                                   + RMRVT LVNVWLSHKPKG+  LPA +A +LS    +    LCFDRP  F PV + +E  T P   QEE G  +R T+  +M++  PLGPTL LE++ PTP+RLS G  K   SFALVY EG   R+      +VG  A
Sbjct:    3 SCYERVMGMTLQD-----------ALLRDVELIDNPHEAKTFWLPADACPATSLERIAKAIYDFHVANK---QHTHGHQDSALTGPVGSTPSAVAH-------SGNIPSRDKPGVVRRDASSHTGGVESGAEWWVQQREEGRHASVGMPFHWDKDEEMLEQEGLVVCPSVSTVTYLTGYGAPTVVLEARATGSGTVQEGDINQTFVSYPALFKHLAFDGGFLHGVPEQLMRTGDQRVS--GKVGRDGGRREARGGNDNHGIRSRTSLPSSNGTRRRQGRMRVTFLVNVWLSHKPKGITSLPADVAGSLS----NISVPLCFDRPGDFVPVPVEKEQETQP--SQEEDGGSIRGTKPSSMLLNVPLGPTLLLEVRAPTPERLSTGGFKENDSFALVYAEGSHSRISTVQAGEVGGAA 389          
BLAST of mRNA_P-littoralis_Contig77.50.1 vs. uniprot
Match: D7G6Z0_ECTSI (Putative LuxR domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Z0_ECTSI)

HSP 1 Score: 253 bits (645), Expect = 1.350e-76
Identity = 138/238 (57.98%), Postives = 155/238 (65.13%), Query Frame = 3
Query:  114 SCFNRILDCDTADDSNDHLDQSSALLLHDAELVDRPHEAKTFWLPAGACPTTSLEKIAKAVFDFHSKNLGHNQHLHPHQDSPDATPGSTPRSAA-----ACNSKRWGDGRAPHGGMSPTVA---TSPQAGYEESGAEWWVQRRQEGRHEDLGMPFHWDKDEKMLDQEGVVVCPAVSTVTYLTEDGAPTVVVECRATERGVVDQGDIERALVSYPALFKHLAFDGGFLHGVPEQLMRPG 803
            SC+ R+L     D            LL D EL+D PHEAKTFWLPA ACP TSLEKIAKA+FDFH  N    QH+     +P    GSTP + A      C  K             P V    TS + G  ESGAEWWVQ+R+EGRH  LGMPFHWDKDE+ML+QEG+VVCPAVSTVTYLT  GAPTVV+E RAT    V++GDI +  VSYPALFKHLAFDGGFLHGVPEQLMR G
Sbjct:    3 SCYERVLGTTRQD-----------ALLRDVELIDNPHEAKTFWLPADACPATSLEKIAKAIFDFHVANK---QHIGQQDSAPTGPVGSTPSAVAHGENIPCRDK-------------PGVVRRDTSSRTGCVESGAEWWVQQREEGRHASLGMPFHWDKDEQMLEQEGLVVCPAVSTVTYLTGYGAPTVVLEARATGSRTVEEGDINQTFVSYPALFKHLAFDGGFLHGVPEQLMRTG 213          
BLAST of mRNA_P-littoralis_Contig77.50.1 vs. uniprot
Match: A0A7R9TJB1_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9TJB1_MICPS)

HSP 1 Score: 130 bits (328), Expect = 4.840e-30
Identity = 113/323 (34.98%), Postives = 138/323 (42.72%), Query Frame = 3
Query:   78 GSDAKLTSTFETSCFNRILDCDTADDSNDHLDQSSA-LLLHDAELVDRPHEAKTFWLPAGACPTTSLEKIAKAVFDFHSKNLGHNQHLHPHQDSPDATPGSTPRSAAACNSK--RWGDGRAPHGGMSPTVATSPQAGYEESGAEWWVQRRQEGRHEDLGMPFHWDKDEKMLDQEGVVVCPAVSTVTYLTEDGAPTVVVECRA-TERGVVD--QGDIERALVSYPALFKHLAFDGGFLHGVPEQLMRPGHNYVEEHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRMRVTLLVNVWLSHKPKGVEPLPATIAAALS 1028
            G+DA     F    F R L     DD+ D  D   A  LL DA    R    ++FWL A A P  +LE +A+AVFD H                    P    R+    N+   R+GDGR   G                 GAEWW Q R+        + FHWDKDE ++D  GVVV P +STVTYLT  GAPTVV+E  A T     D  +G I    VSYP   KH++FDG FLHG   +L RP    VEE                                        RVT LVNVWL +KP+G++  P     AL+
Sbjct:   20 GADAL---DFSFRSFPRFLLLRDDDDAGDPRDGFRAKALLRDAT---RAFVGESFWLAADAAPRCALESLARAVFDRH-------------------VPADVLRAFQQTNADEARFGDGRFGGG----------------CGAEWWTQVRRVDDECREAVAFHWDKDEDLVDDFGVVVHPLISTVTYLTSSGAPTVVLEKTAPTSYAETDGFRGSIAGGFVSYPLAGKHVSFDGRFLHGASRELARP--TDVEE-------------------------------------GYERVTFLVNVWLGYKPRGIDAFPEEAFDALT 262          
BLAST of mRNA_P-littoralis_Contig77.50.1 vs. uniprot
Match: C1EIM3_MICCC (Uncharacterized protein n=2 Tax=Micromonas TaxID=38832 RepID=C1EIM3_MICCC)

HSP 1 Score: 113 bits (283), Expect = 1.790e-23
Identity = 84/266 (31.58%), Postives = 113/266 (42.48%), Query Frame = 3
Query:  231 KTFWLPAGACPTTSLEKIAKAVFDFHSKNLGHNQHLHPHQDSPDATPGSTPRSAAACNSKRWGDGRAPHGGMSPTVATSPQAGYEESGAEWWVQRRQEGRHEDLGMPFHWDKDEKMLDQEGVVVCPAVSTVTYLTEDGAPTVVV--------ECRATERGVVDQGDIERALVSYPALFKHLAFDGGFLHGVPEQLMRPGHNYVEEHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRMRVTLLVNVWLSHKPKGVEPLP 1004
            ++FWL AG+ P  +LE++A+ VF+ H   +             D T               W   +                    SGAEWWVQ R E   +   + FHWDKDE ++D  GV V PA+STVTYLT  GAPT+V+        E     RG V QG      +S+P   KH+AFDG  LHG P +L +P H    E G                                      RV+ LVN+WL+++P+ +EP P
Sbjct:  117 ESFWLAAGSEPRCALEELARKVFELHVAGI-------------DGT---------------WDAAK--------------------SGAEWWVQVRHEDDGQKEAVSFHWDKDEDLVDDFGVNVHPAISTVTYLTTSGAPTLVLDHVPPMMYEDVEQFRGPVGQG-----YLSFPKRGKHIAFDGRLLHGAPRELAKPRH---VEKGYE------------------------------------RVSFLVNIWLNYRPRAIEPFP 290          
BLAST of mRNA_P-littoralis_Contig77.50.1 vs. uniprot
Match: A0A7S3BD98_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BD98_9EUKA)

HSP 1 Score: 108 bits (271), Expect = 3.880e-23
Identity = 89/248 (35.89%), Postives = 117/248 (47.18%), Query Frame = 3
Query:  492 GAEWWVQRRQEGRHEDLGMPFHWDKDEKMLDQEGVVVCPAVSTVTYLTEDGAPTVVVECRAT-ERGVVDQG----------DIE--------RALVSYPALFKHLAFDGGFLHGVPEQLMRPGHNYVEEHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRMRVTLLVNVWLSHKPKGVEPLPATIA---AALSCGD-LSAQPSLCFDRPAAFAPVSIHEEIHTPPLLQQEEAGIPVRDTR 1166
            GAE+WVQRR  G  ED+   FHWDKDE + +   +++ PAVST+TYLT+ GAPTV++E RAT E+G +  G           IE         A+VSYP   K LAF GG LHGVP  L   G +   E                                        R+TLLVNVW+ H+P G+ PLP +     AA+S G  LSA  +   ++  A   V  HE    PP +   E    +R+ +
Sbjct:   27 GAEFWVQRRAAG--EDI--TFHWDKDEALREACDILIHPAVSTITYLTDGGAPTVLLEVRATAEKGQISSGAELVVGRRRKSIEPGGAPITAAAVVSYPRAGKLLAFSGGLLHGVPSSLAEGGGDSSAE----------------------------------------RLTLLVNVWVHHRPLGLCPLPRSFRSRLAAVSRGRVLSAAAAAGVEQRLATVTVGAHER--QPPSVPLPEVATVLRELK 228          
BLAST of mRNA_P-littoralis_Contig77.50.1 vs. uniprot
Match: L1JH63_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JH63_GUITC)

HSP 1 Score: 110 bits (274), Expect = 1.750e-22
Identity = 84/294 (28.57%), Postives = 124/294 (42.18%), Query Frame = 3
Query:  162 DHLDQSSALLLHDAELV---DRPHEAKTFWLPAGACPTTSLEKIAKAVFDFHSKNLGHNQHLHPHQDSPDATPGSTPRSAAACNSKRWGDGRAPHGGMSPTVATSPQAGYEE--SGAEWWVQRRQEGRHEDLGMPFHWDKDEKMLDQEGVVVCPAVSTVTYLTEDGAPTVVVECRATERGVVDQGDIERALVSYPALFKHLAFDGGFLHGVPEQLMRPGHNYVEEHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRMRVTLLVNVWLSHKPKGVEPLPATIAAALS 1028
            D +D S  ++L   +LV   ++ ++ K+FWL A A P  +LE +AK +F+FH+ ++                                                    GY+E  SGAEWWVQ R         + FHWD+DE   D+    V P + TVTYL+E GAPT+V++     +G  +  DI    +S+P L KH+ FDG FLHGVP +L R    +++E                                     +  R+T LVN+W+SH P    P P     ++S
Sbjct:  104 DAIDLSDKMILK--KLVGECEKAYKKKSFWLAANAKPRFTLEALAKQIFEFHTADV---------------------------------------------------KGYDETRSGAEWWVQFRGTKSAHGKSIGFHWDRDEFYADRTDQNVHPQIGTVTYLSEHGAPTLVLDQSPIPKG--ESRDIHSGALSHPKLGKHICFDGRFLHGVPAELSR----HLKE------------------------------------DQFTRITFLVNIWISHIPTDTAPWPEEDVKSMS 302          
BLAST of mRNA_P-littoralis_Contig77.50.1 vs. uniprot
Match: A0A812QHB8_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812QHB8_9DINO)

HSP 1 Score: 113 bits (283), Expect = 1.990e-22
Identity = 74/203 (36.45%), Postives = 99/203 (48.77%), Query Frame = 3
Query:  489 SGAEWWVQRRQEGRHEDLGMPFHWDKDEKMLDQEGVVVCPAVSTVTYLTEDGAPTVVVECRATERGVVDQ--GDIERALVSYPALFKHLAFDGGFLHGVPEQLMRPGHNYVEEHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRMRVTLLVNVWLSHKPKGVEPLPATIAAALSCGDLSAQPSLCFD--RPAAFA 1085
            SGAEWW Q RQ G HE+ G+ FHWD DE  +++  V V P +STVTYL+E GAPT+V+ CR + R  +    G I    +S+P L+KHL FDG FLHG    L         E+G                                      RVT LVN+WL+H+P     LP +++  L  GD    P++  +  RP  +A
Sbjct:  805 SGAEWWAQVRQSGHHEE-GIQFHWDTDEVAVERHDVNVHPHLSTVTYLSESGAPTLVLACRNSRRPSLTSAYGPIHEGALSWPKLWKHLVFDGQFLHGTVPSL---------EYGKDGP----------------------------------RVTFLVNIWLNHRPSNCHRLPKSLSKRL--GDAPMPPNILTETIRPPLYA 961          
BLAST of mRNA_P-littoralis_Contig77.50.1 vs. uniprot
Match: A0A7S4QU38_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QU38_9STRA)

HSP 1 Score: 109 bits (272), Expect = 2.970e-22
Identity = 85/280 (30.36%), Postives = 111/280 (39.64%), Query Frame = 3
Query:  234 TFWLPAGACPTTSLEKIAKAVFDFHSKNLGHNQHLHPHQDSPDATPGSTPRSAAACNSKRWGDGRAPHGGMSPTVATSPQAGYEESGAEWWVQRR---------QEGRHEDLGMPFHWDKDEKMLDQEGVVVCPAVSTVTYLTEDGAPTVVVECRATERGVVDQG---DIERALVSYPALFKHLAFDGGFLHGVPEQLMRPGHNYVEEHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRMRVTLLVNVWLSHKPKGVEPLPATIAAALSCGD 1037
            TFWL A   P   LEK+AK +F  H+  + +N                  + +    +   GD       M  + A          G EWWVQ R            +    G+ FHWDKDE + D   V V P +STVTYLT++GAPT+V E       ++D+     I+ A VS+P   KHL+FDG  LHG P  L+R                                               +RVT LVN+WL HKP G+E  P       SC D
Sbjct:   66 TFWLSARDEPRCLLEKLAKDIFAHHAVVVMNNN-----------------KGSKRAKNHHLGD-------MEFSNAC---------GCEWWVQLRPSPNQKRINSNSKEAQRGIQFHWDKDETLRDVADVFVHPHLSTVTYLTDNGAPTLVFEESMPNERLLDKTAGTGIKGAFVSWPLRGKHLSFDGRLLHGAPSDLLRSSET-----------------------------------------DELRVTFLVNIWLYHKPLGIEKFPEAFLGRFSCVD 271          
BLAST of mRNA_P-littoralis_Contig77.50.1 vs. uniprot
Match: A0A7S1E7H6_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1E7H6_HEMAN)

HSP 1 Score: 104 bits (260), Expect = 3.180e-22
Identity = 76/260 (29.23%), Postives = 107/260 (41.15%), Query Frame = 3
Query:  228 AKTFWLPAGACPTTSLEKIAKAVFDFHSKNLGHNQHLHPHQDSPDATPGSTPRSAAACNSKRWGDGRAPHGGMSPTVATSPQAGYEESGAEWWVQRRQEGRHEDLGMPFHWDKDEKMLDQEGVVVCPAVSTVTYLTEDGAPTVVVECRATERGVVDQGDIERALVSYPALFKHLAFDGGFLHGVPEQLMRPGHNYVEEHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRMRVTLLVNVWLSHKPKGVEPLPA 1007
            A++FWL A A P  +LE++A+ VFD H++ L              A P                          P            SGAEWWV  R     +   + FHWD+DE   D     V P V+TVTYL+E GAPT+++E     +G   +  ++ A +S+P   KH++FDG  LHGVP +LM P   + E+                                        R+T LVN+W++H P    P PA
Sbjct:   20 AQSFWLSASAEPRFTLERMARHVFDLHTRGL--------------AKP------------------------FDPKT----------SGAEWWVHFRGPSARDGEAIGFHWDRDEVYADVTHQNVHPHVATVTYLSEHGAPTMILEQLPISKG---ESTVQAAYLSHPKFGKHVSFDGRLLHGVPPELMAP---HAEKKSYT------------------------------------RITFLVNIWVNHIPTDTHPFPA 189          
BLAST of mRNA_P-littoralis_Contig77.50.1 vs. uniprot
Match: A0A813AZR0_9DINO (KCNB2 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813AZR0_9DINO)

HSP 1 Score: 111 bits (277), Expect = 5.050e-22
Identity = 74/204 (36.27%), Postives = 99/204 (48.53%), Query Frame = 3
Query:  489 SGAEWWVQRRQEGRHEDLGMPFHWDKDEKMLDQEGVVVCPAVSTVTYLTEDGAPTVVVECRATERGVVDQ--GDIERALVSYPALFKHLAFDGGFLHG-VPEQLMRPGHNYVEEHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRMRVTLLVNVWLSHKPKGVEPLPATIAAALSCGDLSAQPSLCFD--RPAAFA 1085
            SGAEWW Q RQ G HE+ G+ FHWD DE  +++  V V P +STVTYL++ GAPT+V+ CR + R  +    G I    +S+P L+KHL FDG FLHG VP      G                                             +RVT LVNVWL+H+P     LP +++  L  GD    P++  +  RP  +A
Sbjct:  177 SGAEWWAQVRQSGHHEE-GIHFHWDTDEVAVERHDVNVHPHLSTVTYLSDSGAPTLVLACRNSRRPSLTSAYGPIYEGALSWPKLWKHLVFDGQFLHGTVPSVEYSKG---------------------------------------------LRVTFLVNVWLNHRPSNCHRLPKSLSKRL--GDAPLPPNILTEALRPPQYA 332          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig77.50.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KNV1_9PHAE2.240e-11450.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6Z0_ECTSI1.350e-7657.98Putative LuxR domain protein n=1 Tax=Ectocarpus si... [more]
A0A7R9TJB1_MICPS4.840e-3034.98Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
C1EIM3_MICCC1.790e-2331.58Uncharacterized protein n=2 Tax=Micromonas TaxID=3... [more]
A0A7S3BD98_9EUKA3.880e-2335.89Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
L1JH63_GUITC1.750e-2228.57Uncharacterized protein n=2 Tax=Guillardia theta T... [more]
A0A812QHB8_9DINO1.990e-2236.45Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP... [more]
A0A7S4QU38_9STRA2.970e-2230.36Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S1E7H6_HEMAN3.180e-2229.23Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A813AZR0_9DINO5.050e-2236.27KCNB2 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig77contigP-littoralis_Contig77:152598..155607 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G6Z0
Model size1779
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons4
Evalue1.49e-78
EggNOG OGs2E8EV@1|root,2SEXB@2759|Eukaryota
Ec32 ortholog descriptionputative LuxR domain protein
Ec32 orthologEc-01_011710.1
Cds size1467
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig77.50.1prot_P-littoralis_Contig77.50.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig77 152860..155557 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791587.8826394-UTR-P-littoralis_Contig77:152597..1528591680791587.8826394-UTR-P-littoralis_Contig77:152597..152859Pylaiella littoralis U1_48UTRP-littoralis_Contig77 152598..152859 -
1680791587.9425278-UTR-P-littoralis_Contig77:155557..1556071680791587.9425278-UTR-P-littoralis_Contig77:155557..155607Pylaiella littoralis U1_48UTRP-littoralis_Contig77 155558..155607 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791587.8965309-CDS-P-littoralis_Contig77:152859..1534591680791587.8965309-CDS-P-littoralis_Contig77:152859..153459Pylaiella littoralis U1_48CDSP-littoralis_Contig77 152860..153459 -
1680791587.906373-CDS-P-littoralis_Contig77:153849..1541011680791587.906373-CDS-P-littoralis_Contig77:153849..154101Pylaiella littoralis U1_48CDSP-littoralis_Contig77 153850..154101 -
1680791587.922188-CDS-P-littoralis_Contig77:154603..1550411680791587.922188-CDS-P-littoralis_Contig77:154603..155041Pylaiella littoralis U1_48CDSP-littoralis_Contig77 154604..155041 -
1680791587.9322631-CDS-P-littoralis_Contig77:155380..1555571680791587.9322631-CDS-P-littoralis_Contig77:155380..155557Pylaiella littoralis U1_48CDSP-littoralis_Contig77 155381..155557 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig77.50.1

>prot_P-littoralis_Contig77.50.1 ID=prot_P-littoralis_Contig77.50.1|Name=mRNA_P-littoralis_Contig77.50.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=489bp
MRRLPKLQEGSDAKLTSTFETSCFNRILDCDTADDSNDHLDQSSALLLHD
AELVDRPHEAKTFWLPAGACPTTSLEKIAKAVFDFHSKNLGHNQHLHPHQ
DSPDATPGSTPRSAAACNSKRWGDGRAPHGGMSPTVATSPQAGYEESGAE
WWVQRRQEGRHEDLGMPFHWDKDEKMLDQEGVVVCPAVSTVTYLTEDGAP
TVVVECRATERGVVDQGDIERALVSYPALFKHLAFDGGFLHGVPEQLMRP
GHNYVEEHGGGGGQPEGQPEEGSTADHSSAASIPSSCAMRRRRQRRMRVT
LLVNVWLSHKPKGVEPLPATIAAALSCGDLSAQPSLCFDRPAAFAPVSIH
EEIHTPPLLQQEEAGIPVRDTRGRTMVIQAPLGPTLSLEMQIPTPQRLSM
GDLKALHSFALVYREGCFPRVKARNKVKVGAVACAQDSKHSDGSACRGEH
TAEHGRGGSCSTKGVTGGAKGDRALGRTRPKRKHDMKV*
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mRNA from alignment at P-littoralis_Contig77:152598..155607-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig77.50.1 ID=mRNA_P-littoralis_Contig77.50.1|Name=mRNA_P-littoralis_Contig77.50.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3010bp|location=Sequence derived from alignment at P-littoralis_Contig77:152598..155607- (Pylaiella littoralis U1_48)
CGCTTCTGCCGTTCAATTTGGCGACTCCATGAGCATCGAGGGTGCACGTA ATGAGACGGCTACCCAAGCTGCAGGAAGGGAGTGACGCCAAGCTAACATC GACGTTCGAAACGAGTTGCTTCAACAGAATACTGGATTGTGACACCGCAG ACGACAGCAACGACCACCTGGACCAGAGCTCTGCCTTATTGCTACACGAC GCTGAGCTCGTCGACCGTCCCCATGAGGTACACAACAAAGTCCAATTGTC ATTGGTATCATGTCGGTGGGATTTCTGCTTTTCAGCTGTTGCTCGTTGTT GGTGAAAATTTCCTCAGAGTTACGTCTCAAACTCGCCAAGTGATCGGCAG GAGTTGTGTTGTCGACTGCAGTATTGCTAGGTGTTGCAAACAACTGCTCC CCCTTTCTTCGTGATCAGAGTTCTGTGGGCTCCTCTTGCATTCGACTGTT TTTATCCACGAGCGAGCCCGCCTTTCCATGTGCAGGAGGTTGGTTACGCA GCAGTCTGGCGACCATATGAGAAACTGCAATTTGATAACGTTCATCGAAC TTCCTGTTTTGTCCAGGCAAAGACCTTCTGGCTGCCCGCGGGTGCCTGCC CGACGACCTCGCTGGAGAAGATAGCCAAAGCCGTTTTCGATTTCCACTCG AAGAACCTTGGCCACAACCAACACCTCCATCCCCACCAAGATTCGCCCGA CGCCACTCCTGGCTCAACCCCTCGTTCGGCAGCAGCGTGCAACAGCAAAC GCTGGGGGGATGGCCGTGCCCCCCACGGCGGTATGAGCCCCACCGTAGCC ACAAGTCCTCAAGCGGGATACGAGGAATCCGGGGCAGAGTGGTGGGTTCA GCGAAGACAAGAAGGCCGCCACGAAGACTTAGGGATGCCGTTTCATTGGG ACAAGGATGAAAAGATGCTGGACCAGGAAGGGGTGGTTGTTTGTCCAGCA GTGTCTACGGTTACATATTTGACCGAGGACGGCGCGCCGACAGTAGTAGT TGAGGTGTGCACGAGCTTGTTTATCACTTGTGTTGTGATGTTGTGTCTTT TCCCATAGTGCTTTTTGGTGTCTTGCTTGATCCACCAGATGCGAGGGTAT GAGGGTACCGGAGTGTTGCATGTCGACCACCTTGTTTCCAGGCACTCTGC TCTGGTACCGAGAGGTCTTGGCAGTATGGCGGTTGTGCATGTAGTCTGCA GGTTTGAGAGATTTGTCTCAACTCGTTGGCACCATCACCATTTGCACGCC AACACGCTCTGAGCGGGCAAGACAGCCAACGCCAGCAGTATCCGATGAGC CGAAATGAGCCGATTTGTTTTTCTGATACGGCGGTAGACCAGCATTACGG TAGTAGTGTAGTTCGTTCGTGGTTCCAGTAGACCTTTCAGCAATTTAGAA AACTGCCACAAGTAGTGTCTCTTCTATGGATCAGCAAGAACAAAAAAGCT CCCTGCCAGCACGTAAAATACGCCAACCACTCGCGTTGCCCCCCTCCCCA CCCCAGTGCCGTGCAACAGAGAGGGGGGTGGTGGATCAAGGGGACATCGA GCGAGCGCTGGTGAGCTACCCCGCACTGTTCAAGCACCTCGCTTTCGATG GTGGTTTCCTCCACGGGGTGCCAGAGCAACTCATGCGACCAGGACACAAC TACGTGGAAGAACACGGAGGAGGCGGTGGGCAACCAGAGGGCCAACCGGA AGAGGGCAGCACAGCTGATCACAGTTCTGCGGCCTCCATTCCTTCCTCGT GCGCCATGGTAAGTGCTACATACATTACACAGAAGCGAGAGCGGTTGTCG ACTTGCCTGCGAATCAGGCATCCACCAGGAAGGTGCGCTCTTGTCCACGT CTTTCTCTCGGGGATGAGCTCGGACGGTACACTGCTGTCAGTGCAGCCCT CCTCCGCAGGCACACCTCCCATGCCTCTCTCGTCAAGAGTCAAATCACTA GTCTTCGGCTGAAGATTCCTGTGTGACCGGGGTAGACACTGCTGCTGTCC GGGGTATGCGCCACCCAACGTCCAACGTATGTGTGTGGTGCTCCCCTCGC ACTTTTCCTTGCGATCTTCTCACCATCGCCTGTTCACTGCTTCCTTTCCG CTTCATTGTTGACCTATCTCTTCATTTGTTTACGGTTGCCGTTCCCAGCG GCGGCGACGACAAAGAAGGATGCGTGTTACCCTCCTCGTGAACGTCTGGC TGTCCCACAAACCGAAGGGGGTTGAACCGCTTCCAGCGACTATCGCAGCG GCTCTAAGCTGTGGAGATCTGAGCGCCCAGCCCTCGCTGTGCTTCGATCG GCCGGCTGCTTTTGCTCCTGTGTCGATTCACGAGGAAATACATACGCCGC CGCTGTTGCAGCAGGAAGAGGCTGGAATACCAGTGCGAGACACTAGAGGG CGCACGATGGTAATACAGGCGCCCCTCGGACCAACCCTTTCCCTCGAAAT GCAAATCCCTACGCCTCAGAGACTGTCGATGGGTGATTTGAAAGCGCTGC ACTCGTTCGCGTTGGTGTATAGAGAGGGTTGTTTCCCACGCGTCAAGGCG CGGAATAAGGTCAAGGTGGGCGCAGTTGCGTGTGCACAGGACTCAAAACA TTCAGATGGATCTGCGTGTAGGGGTGAACACACTGCTGAGCATGGTCGCG GAGGATCCTGCTCCACGAAAGGGGTTACCGGAGGTGCAAAAGGGGATCGT GCATTGGGTAGGACACGACCGAAGAGGAAACACGACATGAAAGTATAATA ATTTTGATGTTTTTGAGGCAACGTGTACATGCACACGTCAACATCTACGT GTGTATACCCCGTAGGCATGGCATTCGGTGTTTCGCGTCGAGTTTTTGAG GAAGTTCGCAGAGTCTCCGAGGAAAGTGTGCGAAGGTTGAAACGAGGTTA AAGACAGGGTCTTACTTGTTGGGGGGCTGGCCCCGGTAATAGGGCATTAC TGCATCAATGATGGTGGAACTGCCGTGGTCGTGAAGTGAGAGTTGGCTAT GGAAATGAAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig77:152598..155607-

>mRNA_P-littoralis_Contig77.50.1 ID=mRNA_P-littoralis_Contig77.50.1|Name=mRNA_P-littoralis_Contig77.50.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1467bp|location=Sequence derived from alignment at P-littoralis_Contig77:152598..155607- (Pylaiella littoralis U1_48)
ATGAGACGGCTACCCAAGCTGCAGGAAGGGAGTGACGCCAAGCTAACATC
GACGTTCGAAACGAGTTGCTTCAACAGAATACTGGATTGTGACACCGCAG
ACGACAGCAACGACCACCTGGACCAGAGCTCTGCCTTATTGCTACACGAC
GCTGAGCTCGTCGACCGTCCCCATGAGGCAAAGACCTTCTGGCTGCCCGC
GGGTGCCTGCCCGACGACCTCGCTGGAGAAGATAGCCAAAGCCGTTTTCG
ATTTCCACTCGAAGAACCTTGGCCACAACCAACACCTCCATCCCCACCAA
GATTCGCCCGACGCCACTCCTGGCTCAACCCCTCGTTCGGCAGCAGCGTG
CAACAGCAAACGCTGGGGGGATGGCCGTGCCCCCCACGGCGGTATGAGCC
CCACCGTAGCCACAAGTCCTCAAGCGGGATACGAGGAATCCGGGGCAGAG
TGGTGGGTTCAGCGAAGACAAGAAGGCCGCCACGAAGACTTAGGGATGCC
GTTTCATTGGGACAAGGATGAAAAGATGCTGGACCAGGAAGGGGTGGTTG
TTTGTCCAGCAGTGTCTACGGTTACATATTTGACCGAGGACGGCGCGCCG
ACAGTAGTAGTTGAGTGCCGTGCAACAGAGAGGGGGGTGGTGGATCAAGG
GGACATCGAGCGAGCGCTGGTGAGCTACCCCGCACTGTTCAAGCACCTCG
CTTTCGATGGTGGTTTCCTCCACGGGGTGCCAGAGCAACTCATGCGACCA
GGACACAACTACGTGGAAGAACACGGAGGAGGCGGTGGGCAACCAGAGGG
CCAACCGGAAGAGGGCAGCACAGCTGATCACAGTTCTGCGGCCTCCATTC
CTTCCTCGTGCGCCATGCGGCGGCGACGACAAAGAAGGATGCGTGTTACC
CTCCTCGTGAACGTCTGGCTGTCCCACAAACCGAAGGGGGTTGAACCGCT
TCCAGCGACTATCGCAGCGGCTCTAAGCTGTGGAGATCTGAGCGCCCAGC
CCTCGCTGTGCTTCGATCGGCCGGCTGCTTTTGCTCCTGTGTCGATTCAC
GAGGAAATACATACGCCGCCGCTGTTGCAGCAGGAAGAGGCTGGAATACC
AGTGCGAGACACTAGAGGGCGCACGATGGTAATACAGGCGCCCCTCGGAC
CAACCCTTTCCCTCGAAATGCAAATCCCTACGCCTCAGAGACTGTCGATG
GGTGATTTGAAAGCGCTGCACTCGTTCGCGTTGGTGTATAGAGAGGGTTG
TTTCCCACGCGTCAAGGCGCGGAATAAGGTCAAGGTGGGCGCAGTTGCGT
GTGCACAGGACTCAAAACATTCAGATGGATCTGCGTGTAGGGGTGAACAC
ACTGCTGAGCATGGTCGCGGAGGATCCTGCTCCACGAAAGGGGTTACCGG
AGGTGCAAAAGGGGATCGTGCATTGGGTAGGACACGACCGAAGAGGAAAC
ACGACATGAAAGTATAA
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