mRNA_P-littoralis_Contig77.50.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig77.50.1 vs. uniprot
Match: A0A6H5KNV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNV1_9PHAE) HSP 1 Score: 355 bits (911), Expect = 2.240e-114 Identity = 209/416 (50.24%), Postives = 244/416 (58.65%), Query Frame = 3
Query: 114 SCFNRILDCDTADDSNDHLDQSSALLLHDAELVDRPHEAKTFWLPAGACPTTSLEKIAKAVFDFHSKNLGHNQHLHPHQDSPDATP-GSTPRSAAACNSKRWGDGRAPHGGMSPTVA--TSPQAGYEESGAEWWVQRRQEGRHEDLGMPFHWDKDEKMLDQEGVVVCPAVSTVTYLTEDGAPTVVVECRATERGVVDQGDIERALVSYPALFKHLAFDGGFLHGVPEQLMRPGHNYVEEHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR-RMRVTLLVNVWLSHKPKGVEPLPATIAAALSCGDLSAQPSLCFDRPAAFAPVSIHEEIHTPPLLQQEEAGIPVRDTRGRTMVIQAPLGPTLSLEMQIPTPQRLSMGDLKALHSFALVYREGCFPRVKARNKVKVGAVA 1349
SC+ R++ D LL D EL+D PHEAKTFWLPA ACP TSLE+IAKA++DFH N QH H HQDS P GSTP + A G P V S G ESGAEWWVQ+R+EGRH +GMPFHWDKDE+ML+QEG+VVCP+VSTVTYLT GAPTVV+E RAT G V +GDI + VSYPALFKHLAFDGGFLHGVPEQLMR G V G + RMRVT LVNVWLSHKPKG+ LPA +A +LS + LCFDRP F PV + +E T P QEE G +R T+ +M++ PLGPTL LE++ PTP+RLS G K SFALVY EG R+ +VG A
Sbjct: 3 SCYERVMGMTLQD-----------ALLRDVELIDNPHEAKTFWLPADACPATSLERIAKAIYDFHVANK---QHTHGHQDSALTGPVGSTPSAVAH-------SGNIPSRDKPGVVRRDASSHTGGVESGAEWWVQQREEGRHASVGMPFHWDKDEEMLEQEGLVVCPSVSTVTYLTGYGAPTVVLEARATGSGTVQEGDINQTFVSYPALFKHLAFDGGFLHGVPEQLMRTGDQRVS--GKVGRDGGRREARGGNDNHGIRSRTSLPSSNGTRRRQGRMRVTFLVNVWLSHKPKGITSLPADVAGSLS----NISVPLCFDRPGDFVPVPVEKEQETQP--SQEEDGGSIRGTKPSSMLLNVPLGPTLLLEVRAPTPERLSTGGFKENDSFALVYAEGSHSRISTVQAGEVGGAA 389
BLAST of mRNA_P-littoralis_Contig77.50.1 vs. uniprot
Match: D7G6Z0_ECTSI (Putative LuxR domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Z0_ECTSI) HSP 1 Score: 253 bits (645), Expect = 1.350e-76 Identity = 138/238 (57.98%), Postives = 155/238 (65.13%), Query Frame = 3
Query: 114 SCFNRILDCDTADDSNDHLDQSSALLLHDAELVDRPHEAKTFWLPAGACPTTSLEKIAKAVFDFHSKNLGHNQHLHPHQDSPDATPGSTPRSAA-----ACNSKRWGDGRAPHGGMSPTVA---TSPQAGYEESGAEWWVQRRQEGRHEDLGMPFHWDKDEKMLDQEGVVVCPAVSTVTYLTEDGAPTVVVECRATERGVVDQGDIERALVSYPALFKHLAFDGGFLHGVPEQLMRPG 803
SC+ R+L D LL D EL+D PHEAKTFWLPA ACP TSLEKIAKA+FDFH N QH+ +P GSTP + A C K P V TS + G ESGAEWWVQ+R+EGRH LGMPFHWDKDE+ML+QEG+VVCPAVSTVTYLT GAPTVV+E RAT V++GDI + VSYPALFKHLAFDGGFLHGVPEQLMR G
Sbjct: 3 SCYERVLGTTRQD-----------ALLRDVELIDNPHEAKTFWLPADACPATSLEKIAKAIFDFHVANK---QHIGQQDSAPTGPVGSTPSAVAHGENIPCRDK-------------PGVVRRDTSSRTGCVESGAEWWVQQREEGRHASLGMPFHWDKDEQMLEQEGLVVCPAVSTVTYLTGYGAPTVVLEARATGSRTVEEGDINQTFVSYPALFKHLAFDGGFLHGVPEQLMRTG 213
BLAST of mRNA_P-littoralis_Contig77.50.1 vs. uniprot
Match: A0A7R9TJB1_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9TJB1_MICPS) HSP 1 Score: 130 bits (328), Expect = 4.840e-30 Identity = 113/323 (34.98%), Postives = 138/323 (42.72%), Query Frame = 3
Query: 78 GSDAKLTSTFETSCFNRILDCDTADDSNDHLDQSSA-LLLHDAELVDRPHEAKTFWLPAGACPTTSLEKIAKAVFDFHSKNLGHNQHLHPHQDSPDATPGSTPRSAAACNSK--RWGDGRAPHGGMSPTVATSPQAGYEESGAEWWVQRRQEGRHEDLGMPFHWDKDEKMLDQEGVVVCPAVSTVTYLTEDGAPTVVVECRA-TERGVVD--QGDIERALVSYPALFKHLAFDGGFLHGVPEQLMRPGHNYVEEHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRMRVTLLVNVWLSHKPKGVEPLPATIAAALS 1028
G+DA F F R L DD+ D D A LL DA R ++FWL A A P +LE +A+AVFD H P R+ N+ R+GDGR G GAEWW Q R+ + FHWDKDE ++D GVVV P +STVTYLT GAPTVV+E A T D +G I VSYP KH++FDG FLHG +L RP VEE RVT LVNVWL +KP+G++ P AL+
Sbjct: 20 GADAL---DFSFRSFPRFLLLRDDDDAGDPRDGFRAKALLRDAT---RAFVGESFWLAADAAPRCALESLARAVFDRH-------------------VPADVLRAFQQTNADEARFGDGRFGGG----------------CGAEWWTQVRRVDDECREAVAFHWDKDEDLVDDFGVVVHPLISTVTYLTSSGAPTVVLEKTAPTSYAETDGFRGSIAGGFVSYPLAGKHVSFDGRFLHGASRELARP--TDVEE-------------------------------------GYERVTFLVNVWLGYKPRGIDAFPEEAFDALT 262
BLAST of mRNA_P-littoralis_Contig77.50.1 vs. uniprot
Match: C1EIM3_MICCC (Uncharacterized protein n=2 Tax=Micromonas TaxID=38832 RepID=C1EIM3_MICCC) HSP 1 Score: 113 bits (283), Expect = 1.790e-23 Identity = 84/266 (31.58%), Postives = 113/266 (42.48%), Query Frame = 3
Query: 231 KTFWLPAGACPTTSLEKIAKAVFDFHSKNLGHNQHLHPHQDSPDATPGSTPRSAAACNSKRWGDGRAPHGGMSPTVATSPQAGYEESGAEWWVQRRQEGRHEDLGMPFHWDKDEKMLDQEGVVVCPAVSTVTYLTEDGAPTVVV--------ECRATERGVVDQGDIERALVSYPALFKHLAFDGGFLHGVPEQLMRPGHNYVEEHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRMRVTLLVNVWLSHKPKGVEPLP 1004
++FWL AG+ P +LE++A+ VF+ H + D T W + SGAEWWVQ R E + + FHWDKDE ++D GV V PA+STVTYLT GAPT+V+ E RG V QG +S+P KH+AFDG LHG P +L +P H E G RV+ LVN+WL+++P+ +EP P
Sbjct: 117 ESFWLAAGSEPRCALEELARKVFELHVAGI-------------DGT---------------WDAAK--------------------SGAEWWVQVRHEDDGQKEAVSFHWDKDEDLVDDFGVNVHPAISTVTYLTTSGAPTLVLDHVPPMMYEDVEQFRGPVGQG-----YLSFPKRGKHIAFDGRLLHGAPRELAKPRH---VEKGYE------------------------------------RVSFLVNIWLNYRPRAIEPFP 290
BLAST of mRNA_P-littoralis_Contig77.50.1 vs. uniprot
Match: A0A7S3BD98_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BD98_9EUKA) HSP 1 Score: 108 bits (271), Expect = 3.880e-23 Identity = 89/248 (35.89%), Postives = 117/248 (47.18%), Query Frame = 3
Query: 492 GAEWWVQRRQEGRHEDLGMPFHWDKDEKMLDQEGVVVCPAVSTVTYLTEDGAPTVVVECRAT-ERGVVDQG----------DIE--------RALVSYPALFKHLAFDGGFLHGVPEQLMRPGHNYVEEHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRMRVTLLVNVWLSHKPKGVEPLPATIA---AALSCGD-LSAQPSLCFDRPAAFAPVSIHEEIHTPPLLQQEEAGIPVRDTR 1166
GAE+WVQRR G ED+ FHWDKDE + + +++ PAVST+TYLT+ GAPTV++E RAT E+G + G IE A+VSYP K LAF GG LHGVP L G + E R+TLLVNVW+ H+P G+ PLP + AA+S G LSA + ++ A V HE PP + E +R+ +
Sbjct: 27 GAEFWVQRRAAG--EDI--TFHWDKDEALREACDILIHPAVSTITYLTDGGAPTVLLEVRATAEKGQISSGAELVVGRRRKSIEPGGAPITAAAVVSYPRAGKLLAFSGGLLHGVPSSLAEGGGDSSAE----------------------------------------RLTLLVNVWVHHRPLGLCPLPRSFRSRLAAVSRGRVLSAAAAAGVEQRLATVTVGAHER--QPPSVPLPEVATVLRELK 228
BLAST of mRNA_P-littoralis_Contig77.50.1 vs. uniprot
Match: L1JH63_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JH63_GUITC) HSP 1 Score: 110 bits (274), Expect = 1.750e-22 Identity = 84/294 (28.57%), Postives = 124/294 (42.18%), Query Frame = 3
Query: 162 DHLDQSSALLLHDAELV---DRPHEAKTFWLPAGACPTTSLEKIAKAVFDFHSKNLGHNQHLHPHQDSPDATPGSTPRSAAACNSKRWGDGRAPHGGMSPTVATSPQAGYEE--SGAEWWVQRRQEGRHEDLGMPFHWDKDEKMLDQEGVVVCPAVSTVTYLTEDGAPTVVVECRATERGVVDQGDIERALVSYPALFKHLAFDGGFLHGVPEQLMRPGHNYVEEHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRMRVTLLVNVWLSHKPKGVEPLPATIAAALS 1028
D +D S ++L +LV ++ ++ K+FWL A A P +LE +AK +F+FH+ ++ GY+E SGAEWWVQ R + FHWD+DE D+ V P + TVTYL+E GAPT+V++ +G + DI +S+P L KH+ FDG FLHGVP +L R +++E + R+T LVN+W+SH P P P ++S
Sbjct: 104 DAIDLSDKMILK--KLVGECEKAYKKKSFWLAANAKPRFTLEALAKQIFEFHTADV---------------------------------------------------KGYDETRSGAEWWVQFRGTKSAHGKSIGFHWDRDEFYADRTDQNVHPQIGTVTYLSEHGAPTLVLDQSPIPKG--ESRDIHSGALSHPKLGKHICFDGRFLHGVPAELSR----HLKE------------------------------------DQFTRITFLVNIWISHIPTDTAPWPEEDVKSMS 302
BLAST of mRNA_P-littoralis_Contig77.50.1 vs. uniprot
Match: A0A812QHB8_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812QHB8_9DINO) HSP 1 Score: 113 bits (283), Expect = 1.990e-22 Identity = 74/203 (36.45%), Postives = 99/203 (48.77%), Query Frame = 3
Query: 489 SGAEWWVQRRQEGRHEDLGMPFHWDKDEKMLDQEGVVVCPAVSTVTYLTEDGAPTVVVECRATERGVVDQ--GDIERALVSYPALFKHLAFDGGFLHGVPEQLMRPGHNYVEEHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRMRVTLLVNVWLSHKPKGVEPLPATIAAALSCGDLSAQPSLCFD--RPAAFA 1085
SGAEWW Q RQ G HE+ G+ FHWD DE +++ V V P +STVTYL+E GAPT+V+ CR + R + G I +S+P L+KHL FDG FLHG L E+G RVT LVN+WL+H+P LP +++ L GD P++ + RP +A
Sbjct: 805 SGAEWWAQVRQSGHHEE-GIQFHWDTDEVAVERHDVNVHPHLSTVTYLSESGAPTLVLACRNSRRPSLTSAYGPIHEGALSWPKLWKHLVFDGQFLHGTVPSL---------EYGKDGP----------------------------------RVTFLVNIWLNHRPSNCHRLPKSLSKRL--GDAPMPPNILTETIRPPLYA 961
BLAST of mRNA_P-littoralis_Contig77.50.1 vs. uniprot
Match: A0A7S4QU38_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QU38_9STRA) HSP 1 Score: 109 bits (272), Expect = 2.970e-22 Identity = 85/280 (30.36%), Postives = 111/280 (39.64%), Query Frame = 3
Query: 234 TFWLPAGACPTTSLEKIAKAVFDFHSKNLGHNQHLHPHQDSPDATPGSTPRSAAACNSKRWGDGRAPHGGMSPTVATSPQAGYEESGAEWWVQRR---------QEGRHEDLGMPFHWDKDEKMLDQEGVVVCPAVSTVTYLTEDGAPTVVVECRATERGVVDQG---DIERALVSYPALFKHLAFDGGFLHGVPEQLMRPGHNYVEEHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRMRVTLLVNVWLSHKPKGVEPLPATIAAALSCGD 1037
TFWL A P LEK+AK +F H+ + +N + + + GD M + A G EWWVQ R + G+ FHWDKDE + D V V P +STVTYLT++GAPT+V E ++D+ I+ A VS+P KHL+FDG LHG P L+R +RVT LVN+WL HKP G+E P SC D
Sbjct: 66 TFWLSARDEPRCLLEKLAKDIFAHHAVVVMNNN-----------------KGSKRAKNHHLGD-------MEFSNAC---------GCEWWVQLRPSPNQKRINSNSKEAQRGIQFHWDKDETLRDVADVFVHPHLSTVTYLTDNGAPTLVFEESMPNERLLDKTAGTGIKGAFVSWPLRGKHLSFDGRLLHGAPSDLLRSSET-----------------------------------------DELRVTFLVNIWLYHKPLGIEKFPEAFLGRFSCVD 271
BLAST of mRNA_P-littoralis_Contig77.50.1 vs. uniprot
Match: A0A7S1E7H6_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1E7H6_HEMAN) HSP 1 Score: 104 bits (260), Expect = 3.180e-22 Identity = 76/260 (29.23%), Postives = 107/260 (41.15%), Query Frame = 3
Query: 228 AKTFWLPAGACPTTSLEKIAKAVFDFHSKNLGHNQHLHPHQDSPDATPGSTPRSAAACNSKRWGDGRAPHGGMSPTVATSPQAGYEESGAEWWVQRRQEGRHEDLGMPFHWDKDEKMLDQEGVVVCPAVSTVTYLTEDGAPTVVVECRATERGVVDQGDIERALVSYPALFKHLAFDGGFLHGVPEQLMRPGHNYVEEHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRMRVTLLVNVWLSHKPKGVEPLPA 1007
A++FWL A A P +LE++A+ VFD H++ L A P P SGAEWWV R + + FHWD+DE D V P V+TVTYL+E GAPT+++E +G + ++ A +S+P KH++FDG LHGVP +LM P + E+ R+T LVN+W++H P P PA
Sbjct: 20 AQSFWLSASAEPRFTLERMARHVFDLHTRGL--------------AKP------------------------FDPKT----------SGAEWWVHFRGPSARDGEAIGFHWDRDEVYADVTHQNVHPHVATVTYLSEHGAPTMILEQLPISKG---ESTVQAAYLSHPKFGKHVSFDGRLLHGVPPELMAP---HAEKKSYT------------------------------------RITFLVNIWVNHIPTDTHPFPA 189
BLAST of mRNA_P-littoralis_Contig77.50.1 vs. uniprot
Match: A0A813AZR0_9DINO (KCNB2 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813AZR0_9DINO) HSP 1 Score: 111 bits (277), Expect = 5.050e-22 Identity = 74/204 (36.27%), Postives = 99/204 (48.53%), Query Frame = 3
Query: 489 SGAEWWVQRRQEGRHEDLGMPFHWDKDEKMLDQEGVVVCPAVSTVTYLTEDGAPTVVVECRATERGVVDQ--GDIERALVSYPALFKHLAFDGGFLHG-VPEQLMRPGHNYVEEHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRMRVTLLVNVWLSHKPKGVEPLPATIAAALSCGDLSAQPSLCFD--RPAAFA 1085
SGAEWW Q RQ G HE+ G+ FHWD DE +++ V V P +STVTYL++ GAPT+V+ CR + R + G I +S+P L+KHL FDG FLHG VP G +RVT LVNVWL+H+P LP +++ L GD P++ + RP +A
Sbjct: 177 SGAEWWAQVRQSGHHEE-GIHFHWDTDEVAVERHDVNVHPHLSTVTYLSDSGAPTLVLACRNSRRPSLTSAYGPIYEGALSWPKLWKHLVFDGQFLHGTVPSVEYSKG---------------------------------------------LRVTFLVNVWLNHRPSNCHRLPKSLSKRL--GDAPLPPNILTEALRPPQYA 332 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig77.50.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig77.50.1 >prot_P-littoralis_Contig77.50.1 ID=prot_P-littoralis_Contig77.50.1|Name=mRNA_P-littoralis_Contig77.50.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=489bp MRRLPKLQEGSDAKLTSTFETSCFNRILDCDTADDSNDHLDQSSALLLHDback to top mRNA from alignment at P-littoralis_Contig77:152598..155607- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig77.50.1 ID=mRNA_P-littoralis_Contig77.50.1|Name=mRNA_P-littoralis_Contig77.50.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3010bp|location=Sequence derived from alignment at P-littoralis_Contig77:152598..155607- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig77:152598..155607- >mRNA_P-littoralis_Contig77.50.1 ID=mRNA_P-littoralis_Contig77.50.1|Name=mRNA_P-littoralis_Contig77.50.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1467bp|location=Sequence derived from alignment at P-littoralis_Contig77:152598..155607- (Pylaiella littoralis U1_48)back to top |