mRNA_P-littoralis_Contig1194.16.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1194.16.1
Unique NamemRNA_P-littoralis_Contig1194.16.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1194.16.1 vs. uniprot
Match: B2KWI6_ECTSI (EsV-1-213-like protein 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=B2KWI6_ECTSI)

HSP 1 Score: 731 bits (1886), Expect = 1.170e-253
Identity = 364/635 (57.32%), Postives = 459/635 (72.28%), Query Frame = 1
Query:    1 MSFRCPVTIETVFNAPTDEQVEQFYEARN-IDRKPFSLLSQDEKWTWGQSLHDNKSLKGFLIYSQLLPSLLKNRIKANNATYHWNALDSTCERGRRKLEQGEEAIARLKRMGSAHSVMQGLSYTIDKRMSVLAFMNVDISEEDERYRCFARREFPMIYGDWGAVSSSSVYLSCSGALGLLWFSTAILGRPCCFESVILPLNTTERRVMEQRFDCPGQFLDGPIKGFQTKWKSVFSAIGTSHRNSEYVILERACQEKYIDGLHVADAFIVFRATI---------------YKQSSKSNIDNGPIVGINDVIREKPEEYIGALDGTVLAAISSTFGQEASLEVQEQCLGMQDGKWCLFDASISKKVREIMAHLDSQMWRSRKQSKPKKNVNANLDPAGLNKKIDGGRILDPMDPKSAERMHEMLKALLRQVWRPLKSLIGKALGPSLEYPAAFLQISSEEAGRLYEHALVEGVKYSDMANLYTLLHLSMGFHRSQNIRESTVHEFSLSPDQTHYKFRFRGRSYKTASTSASSGAFPVSHFNLPPDQSMIVKYISTVGHRFCGVNVEDETRG-LLVNVKGESWTPGDLSARFKRVGAHWLGIENFGPHGCRTFWATHALNSKQVNASNVDDFSSYLQV 1854
            M+FRCPVTI++VF+APT  QV+ FYE+R     KPF  L +DE   W +S HDNK+L GF++YSQL P LL+ RIK N ATYHW  LD   E+GR KLEQ   A  RLKR G   SV +GL + +D   ++LAFM +D+ EEDER R F RREF ++  + G V SSSVY SCS AL LLWF+T +L RPCC ESVILPL+  ER++MEQRF CP +  DGPIK F T WK VF+AIGT HRN +Y +LE+AC+ KYI+G+HVAD +  FRAT+               YK+ SK  +++G +VGI DVIR+KP E IG +DG VL  I  T+G+ A  EV+  C  ++ G   LFD S+S K+REIMAH D ++W++RK+ K ++ V ANLDPAG+NKKI+GG++LDP DPKS   MH MLK++ RQVW+PLK++IG ALG SLEYP AFL+IS EE  +LY+H +  GV Y+D+ANL TLL LS  F RSQ +RESTV EF L    THYKF F+GR +KTAS+  +S A PVSHFNL PDQSMI K+I+ +GHRFCGV   D   G L VN KG+SWT  D+S+RFKR+G  WLGI+NFGPH CR+FW+THAL+S QV+ASN+++FSS+LQV
Sbjct:   38 MTFRCPVTIDSVFSAPTPAQVQMFYESRTGSSGKPFGDLPEDEILAWTESFHDNKTLMGFIVYSQLFPKLLQTRIKLNAATYHWGHLDPASEKGRTKLEQRRSADDRLKRNGFTPSVFRGLPHRVDTCANILAFMKMDVDEEDERLRFFNRREFSILVAERGQVGSSSVYSSCSMALSLLWFATTVLARPCCLESVILPLSVAERKMMEQRFRCPPECFDGPIKSFHTNWKDVFTAIGTCHRNIDYTLLEKACENKYIEGVHVADVYAAFRATMTAPGDMNSIAALVQSYKEHSKHGVESGAVVGIIDVIRDKPVEAIGKIDGGVLGTIFQTYGERACAEVRAACNKLESGS-TLFDDSVSNKLREIMAHFDCELWKARKKEKVERIVAANLDPAGMNKKIEGGKMLDPTDPKSIALMHAMLKSISRQVWKPLKNMIGTALGASLEYPTAFLRISEEEGEKLYKHLVAAGVVYNDIANLCTLLILSFSFQRSQVLRESTVDEFVLVSGGTHYKFSFKGRRFKTASSGGASSAPPVSHFNLSPDQSMITKFIAFIGHRFCGVLKNDGNGGRLFVNSKGQSWTQKDVSSRFKRIGMQWLGIQNFGPHVCRSFWSTHALSSGQVSASNLENFSSFLQV 671          
BLAST of mRNA_P-littoralis_Contig1194.16.1 vs. uniprot
Match: D8LP31_ECTSI (EsV-1-213 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LP31_ECTSI)

HSP 1 Score: 701 bits (1809), Expect = 5.840e-242
Identity = 351/668 (52.54%), Postives = 458/668 (68.56%), Query Frame = 1
Query:    4 SFRCPVTIETVFNAPTDEQVEQFYEARNIDRKPFSLLSQDEKWTWGQSLHDNKSLKGFLIYSQLLPSLLKNRIKANNATYHWNALDSTCERGRRKLEQGEEAIARLKRMGSAHSVMQGLSYTIDKRMSVLAFMNVDISEEDERYRCFARREFPMIYGDWGAVSSSSVYLSCSGALGLLWFSTAILGRPCCFESVILPLNTTERRVMEQRFDCPGQFLDGPIKGFQTKWKSVFSAIGTSHRNSEYVILERACQEKYIDGLHVADAFIVFRAT---------------IYKQSSKSNIDNGPIVGINDVIREKPEEYIGALDGTVLAAISSTFGQEASLEVQEQCLGMQDGKWCLFDASISKKVREIMAHLDSQMWRSRKQSKPKKNVNANLDPAGLNKKIDGGRILDPMDPKSAERMHEMLKALLRQVWRPLKSLIGKALGPSLEYPAAFLQISSEEAGRLYEHALVEGVKYSDMANLYTLLHLSMGFHRSQNIRESTVHEFSLSPDQTHYKFRFRGRSYKTASTSASSGAFPVSHFNLPPDQSMIVKYISTVGHRFCGVNVEDETRGLLVNVKGESWTPGDLSARFKRVGAHWLGIENFGPHGCRTFWATHALNSKQVNASNVDDFSSYLQVYGDAQELLHVIRSTHCCSR---NWK*GSRVGGECRM 1953
            SF+CPV+ + +F  PTD QV QFY ARN    P+  L Q EK  W +SL DN +L GF +YSQL PSLL+NRIK N A++H+  +D     GR +LEQ  EA+ RL+R+GSA SV  GL Y +DK  S+L FM +D  ++D R R F +R+F  I G  G  SSSSVY SCS A+GL+WF+T ILGRP  FESV+LPLN  ERRV+E+R+ CP   LDG I+G++T W+ VF AI   HRN  Y++LERACQ+KYI+G HV DA+ +F+AT                Y + +K  I+ GP+VG  D+IR++P + +G +DG+VL +I  T+G+ A +     C   Q G   LFDAS+  K+ EIMAH DSQ+W++RK+ K    V+ NLDPAGLNKK+DGGR+LDP DPK+ E M++MLK +   VW PLKSLIG+ LG S+E+P+AFL+IS++EA  LYEHA   GV YSD+ANL  LL LS  F RSQ +RE+TV+E++L PD TH++  F+ R++KTA+ SASSGA PVSHF +  DQSM++ +++ VGHRFC V++ D  R L VN  GE WTP D  +RFK++GA+WLGIENF PH CRTFWATHALNS QVN+SN+DDFSSYLQV        +   S +  +    N   G  V   CR+
Sbjct:   45 SFKCPVSPKKIFLEPTDGQVRQFYGARNFSGTPYDRLPQAEKLAWQESLRDNLTLIGFHVYSQLFPSLLENRIKLNKASHHYRDIDRATPEGRNQLEQRREALTRLQRVGSARSVFHGLPYGVDKSKSILQFMKMDFDDDDSRQRFFLQRDFATISGKRGETSSSSVYASCSSAIGLMWFATVILGRPTAFESVVLPLNVMERRVLEERWLCPPCHLDGAIRGWETDWRGVFRAINVPHRNIAYIMLERACQDKYIEGFHVGDAYGLFKATRSAPGDAERIATLFRTYTEKTKYGIECGPVVGSLDIIRQRPVDSVGRMDGSVLGSIHLTYGERAGVAAMAACNTPQGGP-TLFDASVGAKLTEIMAHFDSQLWKTRKRLKMANTVSNNLDPAGLNKKVDGGRMLDPTDPKAVEMMYDMLKGVCFGVWHPLKSLIGEKLGASMEHPSAFLKISNQEAELLYEHAKNTGVLYSDVANLCVLLALSNCFQRSQVMREATVNEYALVPDGTHFRHTFKDRTWKTATASASSGALPVSHFEMSADQSMMIHFVACVGHRFCDVDMRDGNRRLFVNSNGEGWTPNDTRSRFKKIGAYWLGIENFSPHVCRTFWATHALNSGQVNSSNIDDFSSYLQVSSATLRSSYAAASANTAAHTIGNVVLGGVVNSACRV 711          
BLAST of mRNA_P-littoralis_Contig1194.16.1 vs. uniprot
Match: A0A6H5L2T2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2T2_9PHAE)

HSP 1 Score: 690 bits (1781), Expect = 4.010e-238
Identity = 356/710 (50.14%), Postives = 467/710 (65.77%), Query Frame = 1
Query:    1 MSFRCPVTIETVFNAPTDEQVEQFYEARNIDRKPFSLLSQDEKWTWGQSLHDNKSLKGFLIYSQLLPSLLKNRIKANNATYHWNALDSTCERGRRKLEQGEEAIARLKRMGSAHSVMQGLSYTIDKRMSVLAFMNVDISEEDERYRCFARREFPMIYGDWGAVSSSSVYLSCSGALGLLWFSTAILGRPCCFESVILPLNTTERRVMEQRFDCPGQFLDGPIKGFQTKWKSVFSAIGTSHRNSEYVILERACQEKYIDGLHVADAFIVFRATI---------------YKQSSKSNIDNGPIVGINDVIREKPEEYIGALDGTVLAAISSTFGQEASLEVQEQCLGMQDGKWCLFDASISKKVREIMAHLDSQMWRSRKQSKPKKNVNANLDPAGLNKKIDGGRILDPMDPKSAERMHEMLKALLRQVWRPLKSLIGKALGPSLEYPAAFLQISSEEAGRLYEHALVEGVKYSDMANLYTLLHLSMGFHRSQNIRESTVHEFSLSPDQTHYKFRFRGRSYKTASTSASSGAFPVSHFNLPPDQSMIVKYISTVGHRFCG-VNVEDETRGLLVNVKGESWTPGDLSARFKRVGAHWLGIENFGPHGCRTFWATHALNSKQVNASNVDDFSSYLQVYGDAQELLHVIRSTHCCSRNWK*GSRVGGECRMHGRSVRSGCQPKRKET*REEA*VYGRH-SCVSVEVWG*YQTTL 2079
            M+FRCPVTI+ VF APT  QV+ FYE+R+   +PF  L + EK  W +S HDNK+L GF++Y+QL P LL+NRIK N ATYHW  LD++ E+GR KLEQ   A+ RLKR G   SV  GL Y +D    +LA+M +D+ EEDER+R F +REF MI+   G V SSSVY SCS AL LLWF+TAIL RPCC ES+ILPL+ TERR MEQRF CP QF DGPI+ FQT WK VF+AI T HRN  Y +LE+AC++KYI+G+H+AD + VFRAT+               Y Q +K  +++G +VG+ DVIR+K  E IG +DG VL +I S +G+ A L+VQ +C  ++ G   LFD S+S K+ EI+AH D ++W++RK+ K ++ V AN+DPAG+NKKI+GG++LDP DPKS + MH ML+ +  Q                            EE  +L++H L  GV Y+D+ANL TLL LS  F RSQ +RE+TV EF L PD  HYKF F+ R +KTAS+  +S A PVSHF L PDQSMI ++I+ VGHRFCG + +++E R L VN KG+SWT  D+S+RFKR+G HWLGI NFGPH CRTFW+THALNS Q++ SN++DFSS+LQV        ++  + +  +        VG E  + G  V S C     ET  + A  YG+  S   +E  G  + +L
Sbjct:   42 MTFRCPVTIDNVFTAPTSTQVKVFYESRSSKGEPFDHLPEGEKLAWTESFHDNKTLMGFIVYTQLFPKLLQNRIKLNAATYHWAHLDNSSEKGRTKLEQRRNAVDRLKRNGFTRSVFMGLPYRVDTSADILAYMKMDVEEEDERFRFFTKREFSMIFSKRGQVGSSSVYASCSMALSLLWFATAILARPCCLESIILPLSVTERRAMEQRFKCPPQFFDGPIQSFQTNWKDVFAAIDTHHRNINYTMLEKACEDKYIEGVHIADVYAVFRATMTAPDDMNSIAALVRSYNQHAKHGVESGAVVGVIDVIRDKSVEAIGKIDGGVLGSIFSAYGERACLKVQAECSRLEGGS-SLFDDSVSNKLAEILAHFDCELWKARKKDKVERVVAANMDPAGMNKKIEGGKMLDPTDPKSIDLMHTMLQTISGQ----------------------------EEGEQLHKHVLTAGVTYTDVANLCTLLLLSFSFQRSQVLREATVDEFVLVPDARHYKFSFKNRRFKTASSGGTSSAPPVSHFMLSPDQSMITRFIAIVGHRFCGTLCLDNEARRLFVNTKGQSWTQKDISSRFKRIGMHWLGISNFGPHVCRTFWSTHALNSGQISGSNLEDFSSFLQVSSTTLRNSYMAAAANTAAHT------VGNE--VLGAVVNSACTG---ETTEKGARPYGKKLSARRLEFAGEIRASL 711          
BLAST of mRNA_P-littoralis_Contig1194.16.1 vs. uniprot
Match: A0A6H5K0T8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0T8_9PHAE)

HSP 1 Score: 682 bits (1760), Expect = 5.980e-235
Identity = 355/710 (50.00%), Postives = 462/710 (65.07%), Query Frame = 1
Query:    1 MSFRCPVTIETVFNAPTDEQVEQFYEARNIDRKPFSLLSQDEKWTWGQSLHDNKSLKGFLIYSQLLPSLLKNRIKANNATYHWNALDSTCERGRRKLEQGEEAIARLKRMGSAHSVMQGLSYTIDKRMSVLAFMNVDISEEDERYRCFARREFPMIYGDWGAVSSSSVYLSCSGALGLLWFSTAILGRPCCFESVILPLNTTERRVMEQRFDCPGQFLDGPIKGFQTKWKSVFSAIGTSHRNSEYVILERACQEKYIDGLHVADAFIVFRATI---------------YKQSSKSNIDNGPIVGINDVIREKPEEYIGALDGTVLAAISSTFGQEASLEVQEQCLGMQDGKWCLFDASISKKVREIMAHLDSQMWRSRKQSKPKKNVNANLDPAGLNKKIDGGRILDPMDPKSAERMHEMLKALLRQVWRPLKSLIGKALGPSLEYPAAFLQISSEEAGRLYEHALVEGVKYSDMANLYTLLHLSMGFHRSQNIRESTVHEFSLSPDQTHYKFRFRGRSYKTASTSASSGAFPVSHFNLPPDQSMIVKYISTVGHRFCG-VNVEDETRGLLVNVKGESWTPGDLSARFKRVGAHWLGIENFGPHGCRTFWATHALNSKQVNASNVDDFSSYLQVYGDAQELLHVIRSTHCCSRNWK*GSRVGGECRMHGRSVRSGCQPKRKET*REEA*VYGRH-SCVSVEVWG*YQTTL 2079
            M+FRCPVTI+ VF APT  QV  FYE+ +   +PF  L + EK  W +S HDNK+L GF++Y+QL P LL+NRIK N ATYHW  LD++ E+GR KLEQ   A+ RLKR G   SV  GL Y +D    +LA+M +D+ EEDER R F +REF MIY   G V SSSVY SCS AL LLW +TAIL RPCC ES+ILPL+ TERR MEQRF CP QF DGPI+ FQT WK VF+AI T HRN  Y +LE+AC++KYI G+H+AD + VFRAT+               Y Q +K  +++G +VG+ DVIR+K  E IG +DG VL +I S +G+ A L+VQ +C  ++ G   LFD S+S K  EI+AH D ++W++RK+ K ++ V AN+DPAG+NKKI+GG++LDP DPKS + MH ML+ +  Q                            EE  +L++H L  GV Y+D+ANL TLL LS  F RSQ +RE+TV EF L PD THYKF F+ R +KTAS+  +S A PVSHF L PDQSMI ++I+ VGHRFCG + +++E R L VN KG+SWT  D+S+RFKR+G HWLGI NFGPH CRTFW+THALNS Q++ SN++DFSS++QV        ++  + +  +        VG E  + G  V S C     ET  + A  YG+  S   +E  G  + +L
Sbjct:   42 MTFRCPVTIDNVFTAPTATQVNVFYESSSSKGEPFDHLPEGEKLAWTESFHDNKTLMGFIVYTQLFPKLLQNRIKLNAATYHWAHLDNSSEKGRTKLEQRRNAVDRLKRNGFTRSVFMGLPYRVDTSAHILAYMKMDVEEEDERCRFFTKREFSMIYSKRGQVGSSSVYASCSMALSLLWVATAILARPCCLESIILPLSVTERRAMEQRFKCPPQFFDGPIQSFQTNWKDVFAAIDTHHRNINYTMLEKACEDKYIKGVHIADVYAVFRATMTAPDDMNSIAALVRSYNQHAKHGVESGAVVGVIDVIRDKSVEAIGKIDGGVLGSIFSAYGERACLKVQPECSRLEGGS-SLFDDSVSNKQTEILAHFDCELWKARKKDKVERVVAANMDPAGMNKKIEGGKMLDPTDPKSIDLMHTMLQTISGQ----------------------------EEGEQLHKHVLTVGVTYTDVANLCTLLLLSFSFQRSQVLREATVDEFVLVPDATHYKFSFKNRRFKTASSGGTSSAPPVSHFMLSPDQSMITRFIAIVGHRFCGTLCLDNEARRLFVNTKGQSWTQKDISSRFKRIGMHWLGISNFGPHVCRTFWSTHALNSGQISGSNLEDFSSFIQVSSTTLRNSYMAAAANTAAHT------VGNE--VLGAVVNSACTG---ETTEKGARPYGKKLSARRLEFAGEIRASL 711          
BLAST of mRNA_P-littoralis_Contig1194.16.1 vs. uniprot
Match: A0A6H5J9C0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C0_9PHAE)

HSP 1 Score: 675 bits (1742), Expect = 1.220e-231
Identity = 339/640 (52.97%), Postives = 445/640 (69.53%), Query Frame = 1
Query:    1 MSFRCPVTIETVFNAPTDEQVEQFYEARNIDRKPFSLLSQDEKWTWGQSLHDNKSLKGFLIYSQLLPSLLKNRIKANNATYHWNALDSTCERGRRKLEQGEEAIARLKRMGSAHSVMQGLSYTIDK--RMSVLAFMNVDISEEDERYRCFARREFPMIYGDWGAVSSSSVYLSCSGALGLLWFSTAILGRPCCFESVILPLNTTERRVMEQRFDCPGQFLDGPIKGFQTKWKSVFSAIGTSHRNSEYVILERACQEKYIDGLHVADAFIVFRATI---------------YKQSSKSNIDNGPIVGINDVIREKPEEYIGALDGTVLAAISSTFGQEASLEVQEQCLGMQDGKWCLFDASISKKVREIMAHLDSQMWRSRKQSKPKKNVNANLDPAGLNKKIDGGRILDPMDPKSAERMHEMLKALLRQVWRPLKSLIGKALGPSLEYPAAFLQISSEEAGRLYEHALVEGVKYSDMANLYTLLHLSMGFHRSQNIRESTVHEFSLSPDQTHYKFRFRGRSYKTASTSASS-GAFPVSHFNLPPDQSMIVKYISTVGHRFC----GVNVEDETRGLLVNVKGESWTPGDLSARFKRVGAHWLGIENFGPHGCRTFWATHALNSKQVNASNVDDFSSYLQV 1854
            MSFRCPVTI++VF  P  +QV  FYE+RN   KP+  LS+ E+  W +S HDNK+L GF++Y+ L P LL+NRIK N ATYHW  LDS+  +GR KLEQ   A++RL+R+G A S+ +GL + ID     S+L FMN+ + EEDER+R F  REF MIY + G V SSSVY SCS AL LLWF+T +L RPCC ES+ILP+N  ERR MEQRF CP  F DGPI+ FQT W  VF+AIGT HR+ +Y ++E A  EKY++G+HV+DA+  FRAT+               Y++S+K  +++G +VG  DVIR++P   IG +DG VL  I ST+G+ A   VQ +C+ + DG   LFD S+  K+ EIM H D+Q+WR+RK+ K ++ + AN+DPAG+NKK++GG++LDP +P S  +M  MLK+L  QVW+PL+SLIGKALG SLE P  FLQIS  EA  L +      V Y+D+ANL TLL LS  F RSQ +RE+TV EF L PD T +KF F+ R +KTA++S  +  A PVSHF L PDQSMIVK+I+T GH  C        ++  R L VN +G+ W   D+S+RFK++G  WL IENFGPH CR+FWA+ ALNS QVN++N++DFSS+LQV
Sbjct:   46 MSFRCPVTIDSVFAPPAPDQVCTFYESRNHGSKPWGHLSEPEQREWAESCHDNKTLMGFIVYATLFPKLLRNRIKLNAATYHWAHLDSSSAKGRLKLEQRRGAVSRLRRVGFARSLFRGLPHRIDPVADTSILVFMNMSVEEEDERFRFFTNREFSMIYSERGEVGSSSVYSSCSTALSLLWFATTVLARPCCLESIILPINVRERRRMEQRFGCPSHFFDGPIRSFQTTWGGVFAAIGTPHRSIDYTVIEFATSEKYVEGVHVSDAYAAFRATMTAPGDCASIAALVQSYRRSAKHGVESGAVVGALDVIRDRPAGAIGKIDGGVLGTILSTYGETACANVQAECVKL-DGGASLFDDSVRSKLGEIMTHFDNQLWRARKKDKVERLIVANMDPAGINKKVEGGKMLDPTNPDSVAKMMGMLKSLSGQVWKPLRSLIGKALGASLESPGPFLQISESEAQTLAQFVRAASVTYADIANLCTLLLLSFSFQRSQVLREATVDEFVLVPDATRFKFSFKNRRFKTAASSGGNVAAPPVSHFVLTPDQSMIVKFIATAGHGLCCHGKATKPDNGRRRLFVNARGQGWNQKDISSRFKKIGIEWLSIENFGPHVCRSFWASSALNSGQVNSNNLEDFSSFLQV 684          
BLAST of mRNA_P-littoralis_Contig1194.16.1 vs. uniprot
Match: Q8QN77_ESV1K (EsV-1-213 n=2 Tax=root TaxID=1 RepID=Q8QN77_ESV1K)

HSP 1 Score: 661 bits (1706), Expect = 1.710e-226
Identity = 331/633 (52.29%), Postives = 443/633 (69.98%), Query Frame = 1
Query:    1 MSFRCPVTIETVFNAPTDEQVEQFYEARNIDRKPFSLLSQDEKWTWGQSLHDNKSLKGFLIYSQLLPSLLKNRIKANNATYHWNALDSTCERGRRKLEQGEEAIARLKRMGSAHSVMQGLSYTIDKRMSVLAFMNVDISEEDERYRCFARREFPMIYGDWGAVSSSSVYLSCSGALGLLWFSTAILGRPCCFESVILPLNTTERRVMEQRFDCPGQFLDGPIKGFQTKWKSVFSAIGTSHRNSEYVILERACQEKYIDGLHVADAFIVFRATI---------------YKQSSKSNIDNGPIVGINDVIREKPEEYIGALDGTVLAAISSTFGQEASLEVQEQCLGMQDGKWCLFDASISKKVREIMAHLDSQMWRSRKQSKPKKNVNANLDPAGLNKKIDGGRILDPMDPKSAERMHEMLKALLRQVWRPLKSLIGKALGPSLEYPAAFLQISSEEAGRLYEHALVEGVKYSDMANLYTLLHLSMGFHRSQNIRESTVHEFSLSPDQTHYKFRFRGRSYKTASTSASSGAFPVSHFNLPPDQSMIVKYISTVGHRFCGVNVEDETRGLLVNVKGESWTPGDLSARFKRVGAHWLGIENFGPHGCRTFWATHALNSKQVNASNVDDFSSYLQV 1854
            ++++ PVT++ VF  PT+ QV+ FY ARN    PF  LS  EK TW +SLHDN  L G+L+YSQLLP   +NR+K  + + HWN L+ + +R R  LEQ   A  RL+R GS  S   GL Y++D   +VL +MN+D  + D R+R F  REF M   + G +++SSVY SCS AL L++F+  ILGRPCC ESVILPL+ TER V+EQ + CPG  LDGPI  FQT W+ VF AIGT HR+  YV LERA +E YI G HVAD F ++ AT                Y+ +SK  +++G +V + DV+REKP E +G +DG+VL AI+ST+GQ  SL+VQ +CLG+Q G+  LFD S+S K+ EI+ H D  +W++RK+ K +  VN +LDPA +NKKI  G++LDP DP S+E+MH ML+++ RQVW PLK+LIG+ALG S+++P+AFL+IS EEA RLYEHA  +G+ Y+D+ANL TLL LS  F RSQ +RE+T++EF L PD T Y+  F+ R++KTA   ASSG+ PVSHFNL P QSM+V +I+ VGHRFC  +++D  R LL+N KG      D+++ FK++GAHWLG+ NF  H CRTFWAT ALNS QV+ SN++DF S+LQV
Sbjct:   39 VTYKSPVTLKNVFERPTESQVKVFYHARNHSGVPFDRLSDAEKLTWTESLHDNSCLMGYLVYSQLLPCAAENRVKLKSGSAHWNELNVSTDRAR--LEQRRAAYDRLRRNGSTLSAFYGLPYSVDMTKNVLEYMNIDFEQSDLRHRFFLGREFAMTSSEHGKMNASSVYTSCSKALSLMYFTVVILGRPCCLESVILPLSVTERSVLEQTWGCPGTHLDGPINKFQTNWREVFRAIGTPHRSINYVCLERATEESYIGGKHVADCFALYNATRSAPGDAKTIAGLANHYRLNSKIGVESGAVVCVLDVLREKPMEAVGKIDGSVLGAITSTYGQRVSLDVQARCLGLQAGEHSLFDCSVSNKLGEIINHADIALWKARKRLKVELKVNDSLDPADMNKKISEGKMLDPCDPASSEKMHAMLQSISRQVWLPLKTLIGEALGVSMDHPSAFLRISDEEAHRLYEHASTKGMVYADIANLNTLLVLSNSFQRSQVLREATLNEFGLVPDGTFYRQTFKDRAFKTAG--ASSGSPPVSHFNLSPGQSMMVHFIAVVGHRFCNADMKDSKRKLLLNSKGRGCVQNDINSPFKKIGAHWLGLPNFCVHTCRTFWATAALNSGQVDPSNIEDFGSFLQV 667          
BLAST of mRNA_P-littoralis_Contig1194.16.1 vs. uniprot
Match: A0A6H5JVT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVT4_9PHAE)

HSP 1 Score: 683 bits (1762), Expect = 4.590e-226
Identity = 338/632 (53.48%), Postives = 443/632 (70.09%), Query Frame = 1
Query:    4 SFRCPVTIETVFNAPTDEQVEQFYEARNIDRKPFSLLSQDEKWTWGQSLHDNKSLKGFLIYSQLLPSLLKNRIKANNATYHWNALDSTCERGRRKLEQGEEAIARLKRMGSAHSVMQGLSYTIDKRMSVLAFMNVDISEEDERYRCFARREFPMIYGDWGAVSSSSVYLSCSGALGLLWFSTAILGRPCCFESVILPLNTTERRVMEQRFDCPGQFLDGPIKGFQTKWKSVFSAIGTSHRNSEYVILERACQEKYIDGLHVADAFIVFRAT---------------IYKQSSKSNIDNGPIVGINDVIREKPEEYIGALDGTVLAAISSTFGQEASLEVQEQCLGMQDGKWCLFDASISKKVREIMAHLDSQMWRSRKQSKPKKNVNANLDPAGLNKKIDGGRILDPMDPKSAERMHEMLKALLRQVWRPLKSLIGKALGPSLEYPAAFLQISSEEAGRLYEHALVEGVKYSDMANLYTLLHLSMGFHRSQNIRESTVHEFSLSPDQTHYKFRFRGRSYKTASTSASSGAFPVSHFNLPPDQSMIVKYISTVGHRFCGVNVEDETRGLLVNVKGESWTPGDLSARFKRVGAHWLGIENFGPHGCRTFWATHALNSKQVNASNVDDFSSYLQV 1854
            SF+CPV+ + +F  PTD QV QFY ARN    P+  L Q E   W +SL DN +L GF +YSQL PSLL+NRIK N A++H+  +D     GR++LEQ  EA+ RL+R+GSA SV  GL Y++DK  S+L FMN+D  ++D R R F +R+F  I G  G  SSSSVY SCS A+GL+WF+T ILGRP  FESV+LPLN  ERRV+E+R+ CP   LDG I+G++T W+ VF AI   HRN  Y++LERACQ+KYI+G HV DA+ +F+AT                Y + +K  I+ GP+VG  D+IR++P + +G +DG+VL +I  T  Q +S                     +S K+ EIMAH DSQ+W++RK+ K    V+ NLDPAGLNKK+DGGR+LDP DPK+ E M++MLK +   VW PLKSLIG+ LG S+E+P+AFL+IS++EA  LYEHA  +GV YSD+ANL  LL LS  F RSQ +RE+T++EF+L PD TH++  F+ R++KTA+ SASSGA PVSHF +  DQS+++ +++ VGHRFC V++ D  R L VN KGE WTP D  +RFK++GA+WLGIENF PH CRTFWATHALNS QVN+SN+DDFSSYLQV
Sbjct:   45 SFKCPVSPKKIFLEPTDGQVRQFYGARNFSGTPYDRLPQAENLAWQESLRDNLTLIGFHVYSQLFPSLLENRIKLNKASHHYRDIDRATPEGRKQLEQRREALTRLQRVGSARSVFHGLPYSVDKSKSILQFMNMDFDDDDSRQRFFLQRDFATISGKRGETSSSSVYASCSSAIGLMWFATVILGRPTAFESVVLPLNVMERRVLEERWLCPPCHLDGAIRGWETDWRGVFRAINVPHRNIAYIMLERACQDKYIEGFHVGDAYGLFKATRSAPGDAERIATLFRAYTEKTKYGIECGPVVGSLDIIRQRPVDSVGRMDGSVLGSIHLTAAQRSS-------------------TLVSAKLTEIMAHFDSQLWKTRKRLKMANTVSTNLDPAGLNKKVDGGRMLDPTDPKAVEMMYDMLKGVCFGVWHPLKSLIGEELGASMEHPSAFLKISNQEAELLYEHAKNKGVLYSDVANLCVLLALSNCFQRSQVMREATMNEFALVPDGTHFRHTFKDRTWKTATASASSGALPVSHFEMSADQSVMIHFVACVGHRFCDVDMRDGNRRLFVNSKGEGWTPNDTRSRFKKIGAYWLGIENFSPHVCRTFWATHALNSGQVNSSNIDDFSSYLQV 657          
BLAST of mRNA_P-littoralis_Contig1194.16.1 vs. uniprot
Match: B2KWI7_ECTSI (EsV-1-213-like protein 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=B2KWI7_ECTSI)

HSP 1 Score: 650 bits (1677), Expect = 9.900e-224
Identity = 320/578 (55.36%), Postives = 416/578 (71.97%), Query Frame = 1
Query:    1 MSFRCPVTIETVFNAPTDEQVEQFYEARNIDRKPFSLLSQDEKWTWGQSLHDNKSLKGFLIYSQLLPSLLKNRIKANNATYHWNALDSTCERGRRKLEQGEEAIARLKRMGSAHSVMQGLSYTIDKRMSVLAFMNVDISEEDERYRCFARREFPMIYGDWGAVSSSSVYLSCSGALGLLWFSTAILGRPCCFESVILPLNTTERRVMEQRFDCPGQFLDGPIKGFQTKWKSVFSAIGTSHRNSEYVILERACQEKYIDGLHVADAFIVFRATI---------------YKQSSKSNIDNGPIVGINDVIREKPEEYIGALDGTVLAAISSTFGQEASLEVQEQCLGMQDGKWCLFDASISKKVREIMAHLDSQMWRSRKQSKPKKNVNANLDPAGLNKKIDGGRILDPMDPKSAERMHEMLKALLRQVWRPLKSLIGKALGPSLEYPAAFLQISSEEAGRLYEHALVEGVKYSDMANLYTLLHLSMGFHRSQNIRESTVHEFSLSPDQTHYKFRFRGRSYKTASTSASSGAFPVSHFNLPPDQSMIVKYISTVGHRFCG-VNVEDETRGLLVNVKGES 1686
            M+FRCPVTI+ VF APT  QV+ FYE+R+   +PF  L + EK  W +S HDNK+L GF++Y+QL P LL+NRIK N ATYHW  LD++ E+GR KLEQ   A+ RLKR GS  SV  GL YT+D   ++L FM +D+ EEDER+R F +REF MI+   G VSSSSVY SCS AL LLWF+TA+L RPCC ES+ILPL+ TERR MEQRF CP QF DGPI+ FQT WK VF+AI T HRN  Y +LE+AC+ KYI G+H+AD + VFRAT+               Y Q +K  +++G +VG+ DVIR+K  E IG +DG VL +I   +G+ A L+VQ +C G++ G   LFD S+S K+ EI+AH D ++W++RK+ K ++ V AN+DPAG+NKKI+G ++LDP DPKS + MH ML+ +  QVW+PLK +IG+ALG SLEYPAAFL+I+ EE  +L++H L  GV Y+D+ANL TLL LS  F RSQ +RE+TV EF L PD THYK  F+ R +KTAS+  +S A PVSHF L PDQSMI ++I+ VGHRFCG + +++E R L VN KG++
Sbjct:   42 MTFRCPVTIDNVFTAPTATQVKVFYESRSSKGEPFDHLPEGEKLAWTESFHDNKTLMGFIVYTQLFPKLLQNRIKLNAATYHWAHLDNSSEKGRTKLEQRRNAVDRLKRNGSTRSVFMGLPYTVDTSANILTFMKMDVEEEDERFRFFTKREFSMIFSKRGEVSSSSVYASCSMALSLLWFATAVLARPCCLESIILPLSVTERRAMEQRFKCPPQFFDGPIQSFQTNWKDVFAAIDTHHRNINYTMLEKACEHKYIKGVHIADVYAVFRATMTAPDDMNSITALVRSYIQHAKHGVESGAVVGVIDVIRDKSVEAIGKIDGGVLGSIFPAYGERACLKVQAECSGLEGGS-SLFDDSVSNKLTEILAHFDCELWKARKKDKVERVVAANMDPAGMNKKIEGEKMLDPTDPKSIDLMHTMLQTISGQVWKPLKKMIGEALGASLEYPAAFLRITQEEGEQLHKHVLTAGVTYTDVANLCTLLLLSFSFQRSQVLREATVDEFVLVPDATHYKLSFKNRRFKTASSGGTSSAPPVSHFMLSPDQSMITRFIAIVGHRFCGTLCLDNEARRLFVNTKGDT 618          
BLAST of mRNA_P-littoralis_Contig1194.16.1 vs. uniprot
Match: A0A6H5JJP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJP2_9PHAE)

HSP 1 Score: 656 bits (1693), Expect = 1.090e-217
Identity = 327/633 (51.66%), Postives = 445/633 (70.30%), Query Frame = 1
Query:    1 MSFRCPVTIETVFNAPTDEQVEQFYEARNIDRKPFSLLSQDEKWTWGQSLHDNKSLKGFLIYSQLLPSLLKNRIKANNATYHWNALDSTCERGRRKLEQGEEAIARLKRMGSAHSVMQGLSYTIDKRMSVLAFMNVDISEEDERYRCFARREFPMIYGDWGAVSSSSVYLSCSGALGLLWFSTAILGRPCCFESVILPLNTTERRVMEQRFDCPGQFLDGPIKGFQTKWKSVFSAIGTSHRNSEYVILERACQEKYIDGLHVADAFIVFRATI---------------YKQSSKSNIDNGPIVGINDVIREKPEEYIGALDGTVLAAISSTFGQEASLEVQEQCLGMQDGKWCLFDASISKKVREIMAHLDSQMWRSRKQSKPKKNVNANLDPAGLNKKIDGGRILDPMDPKSAERMHEMLKALLRQVWRPLKSLIGKALGPSLEYPAAFLQISSEEAGRLYEHALVEGVKYSDMANLYTLLHLSMGFHRSQNIRESTVHEFSLSPDQTHYKFRFRGRSYKTASTSASSGAFPVSHFNLPPDQSMIVKYISTVGHRFCGVNVEDETRGLLVNVKGESWTPGDLSARFKRVGAHWLGIENFGPHGCRTFWATHALNSKQVNASNVDDFSSYLQV 1854
            ++++ PVT++ VF+ PT+ QV+ FY +RN    PF+ LS  EK  W +SLHDN  L G+L+YSQLLP   +NR+K  + + HWN L+ + +R R  L Q   A  RL+R GS  S   GL Y++D   +VLA+MN+D  + D R+R F  REF M   + G +++SSVY SCS AL L++F+  ILGRPCC ESVILPL+ TER V+EQ + CPG  LDGPI  FQT W  VF AIGT HRN  YV LERA ++ YI G HVAD F ++ AT                Y+ +SK  +++G +V + DV+REKP E +G +DG+VL AI+ST+G+  SL+VQ +CLG+Q G+  LFD S+S K+ EI+ H D ++W++RK+   +  VN +LDPA +NKKI  G++LDP DP S+E+MH ML+++ RQVW PLK++IG+ALG S+++P+AFL+IS EEA RLYEHA  +G+ Y+D+ANL TLL LS  F RSQ +RE+T++EF L PD T Y+  F+ R++KTA   ASSG+ PVSHFNL P QSM+V +I+ VGHRFC  N++D+ R LL+N KG+ +   D+ + FK++GAHWLG+ NF  H CRTFWAT ALNS QV+ SN++DF S+LQV
Sbjct:  574 VTYKSPVTLKNVFDRPTESQVKIFYHSRNHSGVPFNRLSDAEKLIWTESLHDNSCLMGYLVYSQLLPCASENRVKLKSGSAHWNELNVSTDRAR--LGQRRAAYDRLRRNGSTFSAFYGLPYSVDMTKNVLAYMNIDFEQSDLRHRFFLGREFAMTSSEHGKINASSVYTSCSKALSLMYFTVVILGRPCCLESVILPLSVTERSVLEQTWGCPGTHLDGPINKFQTNWCEVFRAIGTPHRNINYVCLERATEDCYIGGKHVADCFALYNATRSAPGDAKTIKGLVNHYRLNSKIGVESGAVVCVLDVLREKPMEAVGKIDGSVLGAITSTYGKRVSLDVQARCLGLQAGEHSLFDCSVSNKLGEIINHADMKLWKARKRLIVELKVNDSLDPADMNKKISEGKMLDPCDPASSEKMHAMLQSISRQVWLPLKTVIGEALGVSMDHPSAFLRISDEEAHRLYEHASTKGMVYADIANLNTLLVLSNSFQRSQVLREATLNEFGLVPDGTFYRQTFKDRAFKTAG--ASSGSPPVSHFNLSPGQSMMVHFIAVVGHRFCNANMKDDKRKLLLNSKGQGYVQSDIKSPFKKIGAHWLGLPNFCVHTCRTFWATAALNSGQVDPSNIEDFGSFLQV 1202          
BLAST of mRNA_P-littoralis_Contig1194.16.1 vs. uniprot
Match: A0A6H5K1E4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1E4_9PHAE)

HSP 1 Score: 580 bits (1495), Expect = 1.840e-196
Identity = 324/693 (46.75%), Postives = 418/693 (60.32%), Query Frame = 1
Query:   10 RCPVTIETVFNAPTDEQVEQFYEARNIDRKPFSLLSQDEKWTWGQSLHDNKSLKGFLIYSQLLPSLLKNRIKANNATYHWNALDSTCERGRRKLEQGEEAIARLKRMGSAHSVMQGLSYTIDKRMSVLAFMNVDISEEDERYRCFARREFPMIYGDWGAVSSSSVYLSCSGALGLLWFSTAILGRPCCFESVILPLNTTERRVMEQRFDCPGQFLDGPIKGFQTKWKSVFSAIGTSHRNSEYVILERACQEKYIDGLHVADAFIVFRATIYKQSSKSNIDNGPIVGINDVIREKPEEYIGALDGTVLAAISSTFGQEASLEVQEQCLGMQDGKWCLFDASISKKVREIMAHLDSQMWRSRKQSKPKKNVNANLDPAGLNKKIDGGRILDPMDPKSAERMHEMLKALLRQVWRPLKSLIGKALGPSLEYPAAFLQISSEEAGRLYEHALVEGVKYSDMANLYTLLHLSMGFHRSQNIRESTVHEFSLSPDQTHYKFRFRGRSYKTASTSASSGAFPVSHFNLPPDQSMIVKYISTVGHRFCGVN--VEDETRGLLVNVKGESWTPGDLSARFKRVGAHWLGIENFGPHGCRTFWATHALNSKQVNASNVDDFSSYLQVYGDAQELLHVIRSTHCCSRNWK*GSRVGGECRMHGRSVRSGCQPKRKET*REEA*VYGRH-SCVSVEVWG*YQTTL 2079
            RCPVTI+ VF+APT  QV+ FYE+ +   KPF  L + E+  W +S HD K+L GF++Y+QLLP LL+NRIK N ATYHW  LD++ E+G  KLEQ   A+ RLKR GS  SV   L Y +D   ++LAFM +D+ EEDER+R F +REF MI+   G VSSSSVY SCS AL LLWF+TA L RPCC ES+ILPL+ TERR MEQRF CP QF DGPI+ FQT WK VF+AI T HRN  Y +LE+AC+ K                                        +K  E IG +DG VL +I S  GQ A L+VQ +C  ++ G   LFD S+S K+ EI+AH D ++W++RK+ K ++ V A +DPAG+NKKI+GG+ILDP DPKS +RMH ML  + RQVW+PLK LIGKALG SLEYPAAFL+IS +E    Y+H +  GV                       +REST+ +F L+ D THYKF  +GR +KTAS+  +S A PVSHF L PDQSMI + I+TVGH +CG+   +++E R L VN +G+S T  D+S+RFKR+G HWLGI N  P G                 SN+D FSS+LQV        ++  + +  +        VG E  + G  V S C     ET  + A  YG+  S   +E  G  + +L
Sbjct:    9 RCPVTIDNVFSAPTPTQVKVFYESSSSKGKPFDHLPKGEELAWTESFHD-KTLMGFIVYAQLLPKLLQNRIKLNAATYHWAHLDNSKEKGSTKLEQRRRAVDRLKRNGSTRSVFMRLPYRVDTSANILAFMKLDVEEEDERFRFFTKREFSMIFSKRGQVSSSSVYASCSMALSLLWFATAALARPCCLESIILPLSVTERRAMEQRFKCPPQFFDGPIQSFQTNWKDVFAAIDTHHRNINYTMLEKACEHK----------------------------------------DKSVEAIGKIDGGVLGSIVSAHGQRACLKVQAECSRLEGGS-SLFDDSVSNKLNEILAHFDCELWKARKKDKVERVVAAKMDPAGMNKKIEGGKILDPTDPKSIDRMHTMLTVISRQVWKPLKKLIGKALGASLEYPAAFLRISQQEGEHQYKHMITAGV-----------------------LRESTIDDFVLALDATHYKFSLKGRRFKTASSGGASSAPPVSHFMLSPDQSMITRLIATVGHMYCGIQQCLDNEARRLFVNSEGQSCTQKDISSRFKRIGMHWLGISNLDPIG-----------------SNLD-FSSFLQVSSTTLRNSYMAAAANTAAHT------VGNE--LLGAVVNSACTG---ETTEKGARPYGKKLSARRLEFAGDIRASL 607          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1194.16.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
B2KWI6_ECTSI1.170e-25357.32EsV-1-213-like protein 2 n=1 Tax=Ectocarpus silicu... [more]
D8LP31_ECTSI5.840e-24252.54EsV-1-213 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LP... [more]
A0A6H5L2T2_9PHAE4.010e-23850.14Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K0T8_9PHAE5.980e-23550.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J9C0_9PHAE1.220e-23152.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
Q8QN77_ESV1K1.710e-22652.29EsV-1-213 n=2 Tax=root TaxID=1 RepID=Q8QN77_ESV1K[more]
A0A6H5JVT4_9PHAE4.590e-22653.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
B2KWI7_ECTSI9.900e-22455.36EsV-1-213-like protein 1 n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JJP2_9PHAE1.090e-21751.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1E4_9PHAE1.840e-19646.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1194contigP-littoralis_Contig1194:52003..54241 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size2194
Hectar predicted targeting categoryother localisation
Exons2
Cds size1923
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789502.850528-UTR-P-littoralis_Contig1194:52002..522731680789502.850528-UTR-P-littoralis_Contig1194:52002..52273Pylaiella littoralis U1_48UTRP-littoralis_Contig1194 52003..52273 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789502.8633554-CDS-P-littoralis_Contig1194:52273..533781680789502.8633554-CDS-P-littoralis_Contig1194:52273..53378Pylaiella littoralis U1_48CDSP-littoralis_Contig1194 52274..53378 -
1680789502.8716133-CDS-P-littoralis_Contig1194:53423..542411680789502.8716133-CDS-P-littoralis_Contig1194:53423..54241Pylaiella littoralis U1_48CDSP-littoralis_Contig1194 53424..54241 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1194.16.1prot_P-littoralis_Contig1194.16.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1194 52274..54241 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1194.16.1

>prot_P-littoralis_Contig1194.16.1 ID=prot_P-littoralis_Contig1194.16.1|Name=mRNA_P-littoralis_Contig1194.16.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=641bp
MSFRCPVTIETVFNAPTDEQVEQFYEARNIDRKPFSLLSQDEKWTWGQSL
HDNKSLKGFLIYSQLLPSLLKNRIKANNATYHWNALDSTCERGRRKLEQG
EEAIARLKRMGSAHSVMQGLSYTIDKRMSVLAFMNVDISEEDERYRCFAR
REFPMIYGDWGAVSSSSVYLSCSGALGLLWFSTAILGRPCCFESVILPLN
TTERRVMEQRFDCPGQFLDGPIKGFQTKWKSVFSAIGTSHRNSEYVILER
ACQEKYIDGLHVADAFIVFRATIYKQSSKSNIDNGPIVGINDVIREKPEE
YIGALDGTVLAAISSTFGQEASLEVQEQCLGMQDGKWCLFDASISKKVRE
IMAHLDSQMWRSRKQSKPKKNVNANLDPAGLNKKIDGGRILDPMDPKSAE
RMHEMLKALLRQVWRPLKSLIGKALGPSLEYPAAFLQISSEEAGRLYEHA
LVEGVKYSDMANLYTLLHLSMGFHRSQNIRESTVHEFSLSPDQTHYKFRF
RGRSYKTASTSASSGAFPVSHFNLPPDQSMIVKYISTVGHRFCGVNVEDE
TRGLLVNVKGESWTPGDLSARFKRVGAHWLGIENFGPHGCRTFWATHALN
SKQVNASNVDDFSSYLQVYGDAQELLHVIRSTHCCSRNWK*
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mRNA from alignment at P-littoralis_Contig1194:52003..54241-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1194.16.1 ID=mRNA_P-littoralis_Contig1194.16.1|Name=mRNA_P-littoralis_Contig1194.16.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2239bp|location=Sequence derived from alignment at P-littoralis_Contig1194:52003..54241- (Pylaiella littoralis U1_48)
ATGTCCTTCAGATGTCCAGTGACCATCGAGACCGTGTTCAACGCACCGAC CGATGAGCAAGTGGAGCAGTTCTACGAGGCGAGGAATATTGACCGGAAGC CATTTAGTCTTCTATCTCAAGACGAGAAATGGACATGGGGTCAGTCGCTA CACGACAACAAGAGTCTCAAAGGTTTCTTGATCTACAGCCAGCTACTCCC GTCGCTCCTAAAGAACAGGATAAAGGCAAACAACGCAACCTACCATTGGA ATGCTCTCGACAGCACATGCGAAAGGGGCAGGCGCAAATTGGAGCAGGGC GAAGAAGCCATCGCTAGGCTGAAAAGGATGGGGTCTGCGCATTCGGTTAT GCAAGGGCTATCCTACACCATCGACAAGAGGATGAGCGTCTTGGCGTTTA TGAACGTGGACATCAGCGAGGAAGACGAGAGGTACCGCTGCTTCGCGAGG CGTGAGTTCCCTATGATCTATGGTGACTGGGGAGCCGTGAGTTCAAGCTC GGTCTACTTATCGTGTTCCGGAGCGCTGGGCCTACTGTGGTTTTCGACCG CCATTCTGGGCCGGCCGTGTTGCTTCGAGTCCGTCATTCTACCGCTGAAC ACTACCGAACGACGCGTGATGGAGCAGAGGTTCGATTGCCCAGGGCAGTT CCTCGACGGACCTATCAAGGGCTTTCAAACGAAGTGGAAGAGTGTGTTCA GCGCCATCGGCACGTCCCATCGTAACAGCGAGTACGTGATTCTGGAGAGA GCGTGTCAGGAAAAATACATAGATGGGCTTCACGTCGCAGATGCCTTCAT TGTTTTTAGAGCCACGATGTCCTTTCCGGGAGACGTCAAACGCATCGCGG CTTAGGTGGAAAGCTACAAGCAGTCTTCAAAATCCAACATCGATAACGGG CCTATTGTGGGGATCAACGATGTCATCAGGGAAAAGCCAGAGGAATACAT TGGTGCTCTCGACGGCACCGTTCTCGCGGCCATCTCTTCGACTTTTGGAC AAGAAGCAAGCCTCGAGGTCCAGGAACAATGCCTCGGTATGCAAGACGGC AAGTGGTGTCTATTCGACGCGAGCATTTCAAAGAAGGTCAGAGAGATCAT GGCACACCTTGACTCCCAGATGTGGAGGTCCCGTAAACAAAGTAAACCCA AAAAGAATGTGAACGCCAATCTTGACCCCGCTGGACTCAACAAAAAAATC GACGGGGGTAGAATCCTCGACCCAATGGACCCAAAATCGGCTGAACGCAT GCACGAGATGCTCAAGGCGCTATTGAGGCAGGTTTGGCGGCCTCTCAAAA GCTTGATTGGGAAAGCCCTCGGCCCGAGCCTAGAGTATCCTGCGGCGTTT CTACAAATTTCAAGTGAAGAGGCGGGGCGGCTGTACGAGCACGCGCTAGT GGAGGGTGTCAAGTACTCGGACATGGCCAATCTCTACACGCTCCTGCATC TCTCGATGGGTTTCCATCGCTCCCAAAACATACGGGAATCAACGGTGCAC GAGTTCTCTCTCTCTCCGGACCAGACGCACTATAAATTCCGTTTTAGGGG GAGGAGTTACAAAACGGCATCGACGTCGGCTTCGAGTGGTGCATTCCCCG TCTCACACTTCAATCTTCCTCCAGACCAATCGATGATCGTGAAATACATA TCCACTGTTGGTCACCGTTTCTGTGGCGTCAACGTGGAGGATGAAACTCG GGGGCTGCTTGTTAACGTCAAGGGTGAGAGCTGGACGCCAGGAGACCTCT CCGCGCGTTTCAAGCGGGTCGGCGCTCACTGGCTGGGTATCGAAAACTTC GGCCCACATGGTTGCCGTACTTTCTGGGCGACACACGCTCTCAATTCGAA ACAGGTTAACGCATCGAACGTCGACGACTTCAGTAGCTACCTGCAGGTGT ACGGCGACGCTCAGGAACTCCTACATGTCATCCGGAGCACACACTGCTGC TCACGCAATTGGAAGTGAGGTTCTAGGGTCGGTGGTGAATGCCGTATGCA CGGGAGAAGTGTCAGATCAGGGTGCCAGCCCAAGCGGAAAGAAACTTAGC GCGAGGAGGCTTGAGTTTATGGGAGACATTCGTGCGTCTCTGTTGAAGTA TGGGGGTGATACCAAACTACTCTTCCGTGACTTGGTGAAAAAGAGGAAAG CGTCTCAACTCGGAGAGGGTGAGAAATGGTTTAGGTGGCAAAACACGTTC TGGCGTGACGACGGCCTGAGGCACTTCAAGCGTTTATTG
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Coding sequence (CDS) from alignment at P-littoralis_Contig1194:52003..54241-

>mRNA_P-littoralis_Contig1194.16.1 ID=mRNA_P-littoralis_Contig1194.16.1|Name=mRNA_P-littoralis_Contig1194.16.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1923bp|location=Sequence derived from alignment at P-littoralis_Contig1194:52003..54241- (Pylaiella littoralis U1_48)
ATGTCCTTCAGATGTCCAGTGACCATCGAGACCGTGTTCAACGCACCGAC
CGATGAGCAAGTGGAGCAGTTCTACGAGGCGAGGAATATTGACCGGAAGC
CATTTAGTCTTCTATCTCAAGACGAGAAATGGACATGGGGTCAGTCGCTA
CACGACAACAAGAGTCTCAAAGGTTTCTTGATCTACAGCCAGCTACTCCC
GTCGCTCCTAAAGAACAGGATAAAGGCAAACAACGCAACCTACCATTGGA
ATGCTCTCGACAGCACATGCGAAAGGGGCAGGCGCAAATTGGAGCAGGGC
GAAGAAGCCATCGCTAGGCTGAAAAGGATGGGGTCTGCGCATTCGGTTAT
GCAAGGGCTATCCTACACCATCGACAAGAGGATGAGCGTCTTGGCGTTTA
TGAACGTGGACATCAGCGAGGAAGACGAGAGGTACCGCTGCTTCGCGAGG
CGTGAGTTCCCTATGATCTATGGTGACTGGGGAGCCGTGAGTTCAAGCTC
GGTCTACTTATCGTGTTCCGGAGCGCTGGGCCTACTGTGGTTTTCGACCG
CCATTCTGGGCCGGCCGTGTTGCTTCGAGTCCGTCATTCTACCGCTGAAC
ACTACCGAACGACGCGTGATGGAGCAGAGGTTCGATTGCCCAGGGCAGTT
CCTCGACGGACCTATCAAGGGCTTTCAAACGAAGTGGAAGAGTGTGTTCA
GCGCCATCGGCACGTCCCATCGTAACAGCGAGTACGTGATTCTGGAGAGA
GCGTGTCAGGAAAAATACATAGATGGGCTTCACGTCGCAGATGCCTTCAT
TGTTTTTAGAGCCACGATCTACAAGCAGTCTTCAAAATCCAACATCGATA
ACGGGCCTATTGTGGGGATCAACGATGTCATCAGGGAAAAGCCAGAGGAA
TACATTGGTGCTCTCGACGGCACCGTTCTCGCGGCCATCTCTTCGACTTT
TGGACAAGAAGCAAGCCTCGAGGTCCAGGAACAATGCCTCGGTATGCAAG
ACGGCAAGTGGTGTCTATTCGACGCGAGCATTTCAAAGAAGGTCAGAGAG
ATCATGGCACACCTTGACTCCCAGATGTGGAGGTCCCGTAAACAAAGTAA
ACCCAAAAAGAATGTGAACGCCAATCTTGACCCCGCTGGACTCAACAAAA
AAATCGACGGGGGTAGAATCCTCGACCCAATGGACCCAAAATCGGCTGAA
CGCATGCACGAGATGCTCAAGGCGCTATTGAGGCAGGTTTGGCGGCCTCT
CAAAAGCTTGATTGGGAAAGCCCTCGGCCCGAGCCTAGAGTATCCTGCGG
CGTTTCTACAAATTTCAAGTGAAGAGGCGGGGCGGCTGTACGAGCACGCG
CTAGTGGAGGGTGTCAAGTACTCGGACATGGCCAATCTCTACACGCTCCT
GCATCTCTCGATGGGTTTCCATCGCTCCCAAAACATACGGGAATCAACGG
TGCACGAGTTCTCTCTCTCTCCGGACCAGACGCACTATAAATTCCGTTTT
AGGGGGAGGAGTTACAAAACGGCATCGACGTCGGCTTCGAGTGGTGCATT
CCCCGTCTCACACTTCAATCTTCCTCCAGACCAATCGATGATCGTGAAAT
ACATATCCACTGTTGGTCACCGTTTCTGTGGCGTCAACGTGGAGGATGAA
ACTCGGGGGCTGCTTGTTAACGTCAAGGGTGAGAGCTGGACGCCAGGAGA
CCTCTCCGCGCGTTTCAAGCGGGTCGGCGCTCACTGGCTGGGTATCGAAA
ACTTCGGCCCACATGGTTGCCGTACTTTCTGGGCGACACACGCTCTCAAT
TCGAAACAGGTTAACGCATCGAACGTCGACGACTTCAGTAGCTACCTGCA
GGTGTACGGCGACGCTCAGGAACTCCTACATGTCATCCGGAGCACACACT
GCTGCTCACGCAATTGGAAGTGA
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