mRNA_P-littoralis_Contig77.19.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig77.19.1 vs. uniprot
Match: A0A6H5KWA0_9PHAE (DUF1279 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KWA0_9PHAE) HSP 1 Score: 244 bits (622), Expect = 3.530e-72 Identity = 153/207 (73.91%), Postives = 165/207 (79.71%), Query Frame = 1
Query: 163 MFALAVRGLIVAALIDTSSCFVNTAAGRPGGITRTVTAGATASSSPFSRASAP--GLSRGGGRLCSLSMVEKNLGPEETVKKYGLEAGLFQALKDGKKEDGDGGGAAGAATTAKDLLTQYGSAYLITSISLSLISFSICYVAVSNGVDMASLLGKVGIETSASAQTTGTVAVAYAIHKAASPIRFPPTVALTPAVAKFLGKGGDKEA 777
MFA RGLIVAALI++SS FV+ AA RPG I R T P + P +SRGG R +L MVEK LGP+ETVKKYGLEAGLF+ALKDG KED DG A A TTAKDLL QYGSAYLITSISLSL+SF IC+VAVSNGVDMASLLGKVGIETSASA+TTGTVAVAYAIHKAASPIRFPPTVALTPAVAKFLGKG +EA
Sbjct: 3 MFA---RGLIVAALIESSSGFVSPAASRPGTIARLPT--------PVGAVALPRSAVSRGG-RSFTLGMVEK-LGPDETVKKYGLEAGLFKALKDGNKEDADGEAGA-ATTTAKDLLKQYGSAYLITSISLSLVSFGICFVAVSNGVDMASLLGKVGIETSASAETTGTVAVAYAIHKAASPIRFPPTVALTPAVAKFLGKGDGEEA 195
BLAST of mRNA_P-littoralis_Contig77.19.1 vs. uniprot
Match: A0A7S1UM22_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UM22_9STRA) HSP 1 Score: 157 bits (397), Expect = 9.350e-41 Identity = 84/136 (61.76%), Postives = 102/136 (75.00%), Query Frame = 1
Query: 385 EETVKKYGLEAGLFQALKDGKKEDGDGGGAAGAATTAKDLLTQYGSAYLITSISLSLISFSICYVAVSNGVDMASLLGKVGIETSASAQTTGTVAVAYAIHKAASPIRFPPTVALTPAVAKFLGKGGDKEAEREDE 792
EE +KYGLE GLF+ LK G+K G+ TAKDLL +YG+AYL TSISL+L+SF+ CY V NGVD+ASLL KVGI S +++T GTVA+AYA+HKAASPIRFPPTVALTP VA+F G G+ E+E E E
Sbjct: 47 EEVTEKYGLEVGLFKTLKSGEK---------GSGQTAKDLLAKYGAAYLTTSISLALVSFATCYYLVDNGVDVASLLAKVGISVSGTSETAGTVAIAYAVHKAASPIRFPPTVALTPVVARFFGNDGEAESEAESE 173
BLAST of mRNA_P-littoralis_Contig77.19.1 vs. uniprot
Match: A0A8J2S4Y9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S4Y9_9STRA) HSP 1 Score: 154 bits (389), Expect = 1.450e-39 Identity = 97/163 (59.51%), Postives = 116/163 (71.17%), Query Frame = 1
Query: 307 RASAPGLSRGGGRLCSLSMVEKNLGPEETVKKYGLEAGLFQALKDGKKEDGDGGGAAGAATTAKDLLTQYGSAYLITSISLSLISFSICYVAVSNGVDMASLLGKVGIETSASAQTTGTVAVAYAIHKAASPIRFPPTVALTPAVAKFLGKGGDKEAEREDEA 795
+A+AP SRG L + V++ L +ETV+K G+E GLF DGD A ATTA DLL QYG AYL+TS S +++SF+ICY VSNGVD+A LLGK+GIE S +AQT GT A+AYA HKAASPIRFPPTVALTP VAK LGKG D EA+ ED+A
Sbjct: 32 KAAAPSTSRGAPLL---AQVDEEL--QETVEKSGVEGGLFSIFTG----DGD---AKEKATTAGDLLKQYGGAYLLTSTSFAIVSFAICYTLVSNGVDVAGLLGKIGIEPSQNAQTGGTFAIAYAAHKAASPIRFPPTVALTPVVAKMLGKG-DGEADAEDDA 181
BLAST of mRNA_P-littoralis_Contig77.19.1 vs. uniprot
Match: A0A8J6CCF1_DIALT (DUF1279 domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CCF1_DIALT) HSP 1 Score: 152 bits (384), Expect = 1.800e-39 Identity = 82/132 (62.12%), Postives = 100/132 (75.76%), Query Frame = 1
Query: 382 PEETVKKYGLEAGLFQALKDGKKEDGDGGGAAGAATTAKDLLTQYGSAYLITSISLSLISFSICYVAVSNGVDMASLLGKVGIETSASAQTTGTVAVAYAIHKAASPIRFPPTVALTPAVAKFLGK---GGD 768
PEE KK+GLEAG+F AL + DG G GA TTAKDLL QYG+AYL+TSI L+++SF++CY+ V NGVD+++LL KVGI S + GTVA+AYA HKAASPIRFPPTVALTP VA+ +GK GGD
Sbjct: 10 PEEVTKKWGLEAGIFSALT-----NKDGSGGKGAMTTAKDLLAQYGAAYLLTSIPLAIVSFALCYLLVDNGVDVSALLAKVGISVSGGTEKVGTVAIAYAAHKAASPIRFPPTVALTPVVARLIGKKKDGGD 136
BLAST of mRNA_P-littoralis_Contig77.19.1 vs. uniprot
Match: A0A7S4D855_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D855_HETAK) HSP 1 Score: 148 bits (374), Expect = 1.610e-37 Identity = 84/141 (59.57%), Postives = 107/141 (75.89%), Query Frame = 1
Query: 337 GGRLCSLSMVEKNLGPEETVKKYGLEAGLFQALKDGKKEDGDGGGAAGAATTAKDLLTQYGSAYLITSISLSLISFSICYVAVSNGVDMASLLGKVGIETSASAQTTGTVAVAYAIHKAASPIRFPPTVALTPAVAKFLGK 759
GG L + ++ L EET KKYGLEAGLF++++ +GDG ++AK+LL +YGSAYL+TSISL+++SFS+CYV V NGVD+A LL KVGIETSA+++ GT A+AYA HKAASPIRFPPTVALTP VA LG+
Sbjct: 45 GGSLQLRAKIDDEL--EETTKKYGLEAGLFKSMQ----SEGDG---ESKVSSAKELLKKYGSAYLVTSISLAIVSFSLCYVMVDNGVDVAGLLSKVGIETSATSEKVGTFALAYAAHKAASPIRFPPTVALTPVVANLLGQ 176
BLAST of mRNA_P-littoralis_Contig77.19.1 vs. uniprot
Match: A0A250XLP9_9CHLO (DUF1279 domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XLP9_9CHLO) HSP 1 Score: 147 bits (370), Expect = 4.440e-37 Identity = 82/143 (57.34%), Postives = 107/143 (74.83%), Query Frame = 1
Query: 349 CSLSMVEKN-LGPEETVKKYGLEAGLFQALKDGKKEDGDGGGAAGAATTAKDLLTQYGSAYLITSISLSLISFSICYVAVSNGVDMASLLGKVGIETSASAQTTGTVAVAYAIHKAASPIRFPPTVALTPAVAKFLGKGGDKE 774
C++S E++ L P E +KYGLEAGLF+ L K+EDG AK LLTQYGSAYL+TSI+L+LISFS+CY AV+ G+D+ASLL KVG++ + +++T GT A+AYA HKA SP+RFPPTVALTP VAK++GK K+
Sbjct: 34 CAVSPKEEDKLSPSEATEKYGLEAGLFKVLSS-KEEDGK----VSKTDQAKQLLTQYGSAYLLTSITLALISFSLCYFAVNAGLDVASLLSKVGLQVNDTSETVGTFAIAYAAHKALSPVRFPPTVALTPVVAKWIGKKAGKD 171
BLAST of mRNA_P-littoralis_Contig77.19.1 vs. uniprot
Match: A0A835YRB9_9STRA (Transmembrane protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRB9_9STRA) HSP 1 Score: 147 bits (371), Expect = 5.090e-37 Identity = 81/137 (59.12%), Postives = 99/137 (72.26%), Query Frame = 1
Query: 382 PEETVKKYGLEAGLFQALKDGKKEDGDGGGAAGAATTAKDLLTQYGSAYLITSISLSLISFSICYVAVSNGVDMASLLGKVGIETSASAQTTGTVAVAYAIHKAASPIRFPPTVALTPAVAKFLGKGGDKEAEREDE 792
PE +KYGLEAGLF +K G + G AK+LL +YG AYLITSIS +L+SFSICYV V +GVD+A+LL KVGI+ +A+ + GT A+AYA HKAASPIRFPPTVALTP VAKFLGK D+ A+ + E
Sbjct: 61 PEAVTEKYGLEAGLFSVMKSGGQNRGQ---------QAKELLKRYGGAYLITSISFALVSFSICYVLVDSGVDVAALLNKVGIDATATTEKAGTFAIAYAAHKAASPIRFPPTVALTPVVAKFLGKKVDETADADSE 188
BLAST of mRNA_P-littoralis_Contig77.19.1 vs. uniprot
Match: A0A061R5E1_9CHLO (Protein fam210b-like n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R5E1_9CHLO) HSP 1 Score: 147 bits (370), Expect = 8.570e-37 Identity = 90/150 (60.00%), Postives = 111/150 (74.00%), Query Frame = 1
Query: 334 GGGRL-CSLSMVE---KNLGPEETVKKYGLEAGLFQALKDGKKEDGDGGGAAGAATTAKDLLTQYGSAYLITSISLSLISFSICYVAVSNGVDMASLLGKVGIETSASAQTTGTVAVAYAIHKAASPIRFPPTVALTPAVAKFLGKGGDK 771
G GR+ CS + E K++G E T +KYGLEAGLF+ D K D +A AT AK+LL +YGSAYLITSIS +++S++ICYV V GVD+A+LLGKVGI TSA+++ GT A+AYA HKAASPIRFPPTVALTP VAK LGK D+
Sbjct: 47 GQGRVSCSATPEEPKTKSVGTE-TTEKYGLEAGLFKVFTD-KSSD-----SAKKATDAKELLKRYGSAYLITSISFAIVSYAICYVLVDQGVDVAALLGKVGISTSATSEKVGTAAIAYAAHKAASPIRFPPTVALTPVVAKLLGKKVDE 189
BLAST of mRNA_P-littoralis_Contig77.19.1 vs. uniprot
Match: A0A7S1SLD8_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SLD8_9CHLO) HSP 1 Score: 144 bits (364), Expect = 4.690e-36 Identity = 83/138 (60.14%), Postives = 99/138 (71.74%), Query Frame = 1
Query: 367 EKNLGPEETVKKYGLEAGLFQALKDGKKEDGDGGGAAGAATTAKDLLTQYGSAYLITSISLSLISFSICYVAVSNGVDMASLLGKVGIETSASAQTTGTVAVAYAIHKAASPIRFPPTVALTPAVAKFLGKGGDKEAE 780
E NL ET KKYGLEAGLF+AL D K+ A AK LL QYGSAYLITS+S +++S++ICY V GVD+ASLL KVGI TS++++ GT A+AYA HKAASPIRFPPTVALTP VAK +GK +E E
Sbjct: 58 EPNL--SETAKKYGLEAGLFKALTDRSKDK------VTKAADAKTLLKQYGSAYLITSVSFAIVSYAICYFLVDQGVDVASLLSKVGITTSSTSEKVGTAAIAYAAHKAASPIRFPPTVALTPVVAKLIGKEAKEEEE 187
BLAST of mRNA_P-littoralis_Contig77.19.1 vs. uniprot
Match: A0A7S2V8E4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8E4_9STRA) HSP 1 Score: 144 bits (363), Expect = 5.700e-36 Identity = 83/131 (63.36%), Postives = 94/131 (71.76%), Query Frame = 1
Query: 367 EKNLGPEETVKKYGLEAGLFQALKDGKKEDGDGGGAAGAATTAKDLLTQYGSAYLITSISLSLISFSICYVAVSNGVDMASLLGKVGIETSASAQTTGTVAVAYAIHKAASPIRFPPTVALTPAVAKFLGK 759
+KNL EE +KYGLEAGLFQA K G + G AK+LL +YGSAYLITSI+ +LISF ICY V NGVD+A LL KVGI+ A+T GT A+AYA HKAASPIRFPPTVALTP VAK LGK
Sbjct: 60 DKNL--EEVTEKYGLEAGLFQAFKSGGENKG---------VQAKELLQRYGSAYLITSITFALISFGICYTLVDNGVDVAGLLEKVGIQAGDKAETAGTFAIAYAAHKAASPIRFPPTVALTPVVAKALGK 179 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig77.19.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig77.19.1 >prot_P-littoralis_Contig77.19.1 ID=prot_P-littoralis_Contig77.19.1|Name=mRNA_P-littoralis_Contig77.19.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=213bp MFALAVRGLIVAALIDTSSCFVNTAAGRPGGITRTVTAGATASSSPFSRAback to top mRNA from alignment at P-littoralis_Contig77:59076..61487- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig77.19.1 ID=mRNA_P-littoralis_Contig77.19.1|Name=mRNA_P-littoralis_Contig77.19.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2412bp|location=Sequence derived from alignment at P-littoralis_Contig77:59076..61487- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig77:59076..61487- >mRNA_P-littoralis_Contig77.19.1 ID=mRNA_P-littoralis_Contig77.19.1|Name=mRNA_P-littoralis_Contig77.19.1|organism=Pylaiella littoralis U1_48|type=CDS|length=639bp|location=Sequence derived from alignment at P-littoralis_Contig77:59076..61487- (Pylaiella littoralis U1_48)back to top |