mRNA_P-littoralis_Contig1194.15.11 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1194.15.11 vs. uniprot
Match: A0A6H5JJK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK0_9PHAE) HSP 1 Score: 468 bits (1205), Expect = 2.690e-140 Identity = 253/401 (63.09%), Postives = 304/401 (75.81%), Query Frame = 1
Query: 7 GIFWVRVGRGGKDQLQALFAGLAREVSVAPRVPHQFNSVDEVIQHLTQ-VAVDTLPRLVVLDDVWEREVVDALQPTGLQLLVTTRRSSVVAVEGGRTVVGNMENGEARELLKSKSGAVALPETEANKVVEDCGWHALTLAIAGSLRCVTVSPNSAPAWRKLHLEIARQKRTSLGPEMDADIGDDLTKLSLFSVLDLSLVSMGRDEKHLLLSLVVLARGVSAPAPMLANLWGKDNRGARKEADFLVDNSLLQEVGGSFRMHDLLLDFIRTKCHGEDALIESAVGRQAQYLGTLAVLRGYFGNGEVGGGLYSLIRLWRSLFELSSNEQLEVDAYNSSLGDLGEAESTDAASMFFAVGRLFELQGKYEEAEPLYKRSLAIDEKFYGPEHPEVATDLNNWAGLLK 1206
GI W+RVGR G+DQLQALF L R A ++P +FNS +E+IQ+LT VA D LPRLVVLDDVWER VVD L+PTGL+LLVTTR SVVA+ GGRT VGNM+ GEARELLKS+SGA+ALP+TEA++V CGWHALTLAIAGSLR V PNSA WR+L E+ + K + GP+MDADIGDD TK SLF VL+LSL S+G D + L LSL+VLARGVSAPAPMLA++W KD+ GAR EADF V NSLLQEV SFR+HDLLLDF+RT+C E +I+ AV RQ+QYLG LAVL+ Y G+ G YSLI LWR L EL +QLEV+ Y++SLG LG+ ST A+ F AVGRL EL+G + EA+P R++ I EK GPEHP++A LNN A LL+
Sbjct: 286 GISWLRVGRVGEDQLQALFEALTRGAFPAAKLPPRFNSPEEIIQYLTVLVAEDKLPRLVVLDDVWERAVVDTLRPTGLRLLVTTRLDSVVAMRGGRTTVGNMDGGEARELLKSRSGAIALPKTEADQVAAACGWHALTLAIAGSLRFVKDDPNSASTWRRLASEMTQTKNSVRGPKMDADIGDDPTKKSLFPVLELSLESLGGDRERLFLSLLVLARGVSAPAPMLASIWDKDDMGARNEADFFVSNSLLQEVDSSFRLHDLLLDFVRTRC--EKKIIDEAVKRQSQYLGRLAVLQDYEAKGDSLEGFYSLIVLWRKLAELCG-KQLEVEVYHASLGKLGDDVSTGASDAFSAVGRLHELEGNFAEADPFNLRAIEIGEKVLGPEHPDLAVWLNNRAELLR 683
BLAST of mRNA_P-littoralis_Contig1194.15.11 vs. uniprot
Match: A0A6H5J6Q8_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6Q8_9PHAE) HSP 1 Score: 392 bits (1006), Expect = 1.900e-117 Identity = 236/426 (55.40%), Postives = 279/426 (65.49%), Query Frame = 1
Query: 1 RQGIFWVRVGRGGKDQLQALFAGLAREVSVAPRVPHQFNSVDEVIQHLTQV-AVDTLPRLVVLDDVWEREVVDALQPTGLQLLVTTRRSSVVAVEGGRTVVGNMENGEARELLKSKSGAVALPETEANKVVEDCGWHALTLAIAGSLRCVTVSPNSAPAWRKLHLEIARQKRTSLGPEMDADIGDDLTKLSLFSVLDLSLVSMGRDEKHLLLSLVVLARGVSAPAPMLANLWGK---------------DNRGARKEADFLVDNSLLQEVGGSFRMHDLLLDFIRTKCHGEDALIESAVGRQAQYLGTLAVLRGYFGNGEVGGGLYSLIRLWRSLFELSSNEQLEVDAYNSSLGDLGEAESTDAASMFFAVGRLFEL--------QGKYEEAEPLYKRSLAIDEKFYGPEHPEVATDLNNWAGLLK 1206
R G FW+RVG GG+DQL AL LAR+V+ A ++P QFNS++++IQHLT V A D LPRL+VLDDV ER VVD L+PTGL+LLVTTR S+VAV GGRTVVGNM+ EARELLKSKSGA+ LPETEA+ Q +T LGP+MDADIGD+ TK SLF VLDLSL +GR + L LSLVVLARGVSAPAPMLA++W DN GAR EADF V NSLLQEV GSFR+HDLLLDF RT+C E +++ AV RQ+QYL LAVL+ Y G+ GLYSLI LWR L E NEQ+EV+AY++SLG+LG+ ES AA F AVGRL L QGK +EA PLY R++ I E GPEH +VAT LNN A LL+
Sbjct: 239 RAGAFWLRVGPGGEDQLFALCDILARKVTPATKLPQQFNSLEDIIQHLTVVVAEDRLPRLMVLDDVLERAVVDTLRPTGLRLLVTTRLDSLVAVRGGRTVVGNMDRAEARELLKSKSGAIELPETEAD-----------------------------------------QTKTILGPQMDADIGDNPTKESLFHVLDLSLKYLGRHQHRLFLSLVVLARGVSAPAPMLASIWDMVGLCVIKCATSLEKVDNMGARNEADFFVSNSLLQEVDGSFRVHDLLLDFARTRCEKE--ILDEAVKRQSQYLRRLAVLQDYRAKGDPLEGLYSLIVLWRKLAEHCGNEQVEVEAYHASLGELGDDESAGAADAFSAVGRLLGLETHLYVSFQGKLDEAGPLYDRAIRIWEAALGPEHSQVATALNNRARLLR 621
BLAST of mRNA_P-littoralis_Contig1194.15.11 vs. uniprot
Match: D7G7W8_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7W8_ECTSI) HSP 1 Score: 353 bits (905), Expect = 1.750e-98 Identity = 207/402 (51.49%), Postives = 264/402 (65.67%), Query Frame = 1
Query: 4 QGIFWVRVGRGGKDQLQALFAGLAREVSVAPRVPHQFNSVDEVIQHLT-QVAVD-TLPRLVVLDDVWEREVVDALQPTGLQLLVTTRRSSVVAVEGGRTVVGNMENGEARELLKSKSGAVALPETEANKVVEDCGWHALTLAIAGSLRCVTVSPNSAPAWRKLHLEIARQKRTSLGPEMDADIGDDLTKLSLFSVLDLSLVSMGRDEKHLLLSLVVLARGVSAPAPMLANLWGKDNRGARKEADFLVDNSLLQEVGGSFRMHDLLLDFIRTKCHGEDALIESAVGRQAQYLGTLAVLRGYFGNGEVGGGLYSLIRLWRSLFELSSNEQLEVDAYNSSLGDLGEA-ESTDAASMFFAVGRLFELQGKYEEAEPLYKRSLAIDEKFYGPEHPEVATDLNNWAGL 1200
+GIFW+ VGR G +L AL LARE+ V V + +D+ ++ + VA D ++PRL+VLDDVW EV+DAL+PTGLQ+LVTTR +SV G +VG+ME GEARELL KSGAVALP EAN+V DCG H LTL IAGSLRCV +P+SA AWR+LH EI R KR+S G EM D ++ ++ SLF VL LS + E+ LSL VLARGV AP MLANLW KD +GA+KEA V SLL E +F +HD+LLDFI C E ++++ AV RQ YL L V+ Y GE G+YSLI LWR + +LS NE+L+V+ Y +SL +LGE E D A+ +G +F LQ +Y EAEPLY+R+ I E G ++P V T L+N A L
Sbjct: 267 RGIFWLDVGRHGNLKLPALVQRLAREMDV---VSENMDGLDDCVRDIAFAVARDNSVPRLLVLDDVWHEEVMDALRPTGLQILVTTRLASV----GRGMLVGDMEEGEARELLSKKSGAVALPVPEANQVARDCGCHPLTLVIAGSLRCVREAPDSALAWRELHSEIERIKRSSRGLEMATDSDEEPSQSSLFPVLSLSFERLKVQEQDSFLSLAVLARGVPAPVAMLANLWDKDEKGAKKEASAFVGRSLLIEEQEAFIVHDMLLDFIDVMCQHESSVVQLAVMRQTHYLSRLPVVWRYCRKGESLEGMYSLISLWRPVMKLSGNEKLDVETYEASLRELGEEHEPIDVANACMIIGDVFLLQDQYSEAEPLYQRAEEIYENLQGHDYPPVVTSLSNRASL 661
BLAST of mRNA_P-littoralis_Contig1194.15.11 vs. uniprot
Match: A0A6H5JSG2_9PHAE (AAA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSG2_9PHAE) HSP 1 Score: 333 bits (854), Expect = 2.790e-94 Identity = 202/410 (49.27%), Postives = 264/410 (64.39%), Query Frame = 1
Query: 4 QGIFWVRVGRGGKDQLQALFAGLAREVSVAPRVPHQFNSVDEVIQHLT-QVAVD-TLPRLVVLDDVWEREVVDALQPTGLQLLVTTRRSSVVAVEGGRTVVGNMENGEARELLKSKSGAVALPETEANKVVEDCGWHALTLAIAGSLRCVTVSPNSAPAWRKLHLEIARQKRTSLGPEMDADIGDDLTKLSLFSVLDLSLVSMGRDEKHLLLSLVVLARGVSAPAPMLANLWGKDNRGARKEADFLVDNSLLQEVGGSFRMHDLLLDFIRTKCHGEDALIESAVGRQAQYLGTLAVLRGYFGNGEVGGGLYSLIRLWRSLFELSSNEQLEVDAYNSSLGDLGEA-ESTDAASMFFAVGRLFELQ-------GKYEEAEPLYKRSLAIDEKFYGPEHPEVATDLNNWAGLL 1203
+GIFW+ VGR G +L AL LARE+ V V + +D+ ++ + VA D ++PRL++LDDVW EVV+AL+PTGLQ++VTTR +SV G +VG+ME+GEARELL+ KSGAVALP EAN+V DCG H LTLAIAGSLRCV +P+SA AWR+LH EI R KR+ G +M D ++ ++ LF VL LS + E+ LSLVVLARGV AP MLANLW KD +GA+KEA V SLL E +F +HDLLLDFI C E +++ AV RQ YL L V+ Y GE G+YSLI LWR + +LS NE+L+V+AY +SL +LGE E D A+ +G +F LQ G+Y EA L+++S + E+ P+V L+N A LL
Sbjct: 267 RGIFWLDVGRHGNLKLPALVERLAREMDV---VSENMDGLDDCVRDIAFAVARDNSVPRLLILDDVWHEEVVNALRPTGLQIVVTTRLASV----GRGMIVGDMEDGEARELLRKKSGAVALPAPEANQVARDCGCHPLTLAIAGSLRCVREAPDSALAWRELHSEIGRIKRSRRGLQMTTDSDEEPSQSPLFPVLRLSFERLRVQEQDSFLSLVVLARGVPAPVAMLANLWDKDMKGAKKEASAFVGRSLLIEEREAFVVHDLLLDFIDVMCQHESGVVQRAVMRQTHYLSRLPVVWRYCRKGESLEGMYSLISLWRPVMKLSGNEKLDVEAYENSLRELGEEHEPIDVANACMMIGDVFLLQVRSTWAMGEYAEAGRLHEQSQTVREEVPDVGDPDVDVSLSNVATLL 669
BLAST of mRNA_P-littoralis_Contig1194.15.11 vs. uniprot
Match: A0A6H5LJA6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJA6_9PHAE) HSP 1 Score: 301 bits (772), Expect = 3.490e-86 Identity = 197/417 (47.24%), Postives = 253/417 (60.67%), Query Frame = 1
Query: 1 RQGIFWVRVGRGGKDQLQALFAGLAREVSVAPR-----VPHQFNSVDEVIQHLTQVA-VDTLPRLVVLDDVWEREVVDALQPTGLQLLVTTRRSSVVAVEGGRTVVGNMENGEARELLKSKSGAVALP----ETEANKVVEDCGWHALTLAIAGSLRCVTVSPNSAPAWRKLHLE---IARQKRTSLGPEMDADIGDDLTKLSLFSVLDLSLVSMGRDEKHLLLSLVVLARGVSAPAPMLANLWG-KDNRGARKEADFLVDNSLLQEVGGS-FRMHDLLLDFIRTKCHGEDALIESAVGRQAQYLGTLAVLRGYFGNGEVGGG---LYSLIRLWRSLFELSSNEQLEVDAYNSSLGDLGEAEST-DAASMFFAVGRLFELQGKYEEAEPLYKRSLAIDEKFYGPEHPEVATDLNNWA 1194
R G+FW+RVGR K+ L +L GLARE+S AP VPH S+++V QHL VA T PRLVVLDDVWEREVVDAL GL++LVTTR SVV V GG +G+M EA ELL S V P T+ KVV CG L LAIAGS+ V +A AW +L E +A++ R G+ + + + VL S ++ ++ L + VLA G AP ML NLW +D G R+EA+ LV LLQ VGGS +R+HDL+L+F++T E+ ++E A QAQYLG + VL+ Y G+ E G G L+ L LWRS+ +LS + +LEV +Y +SLG+L E+T D AS + VG LF +QGK+ EAEPLY RS AI EK GPEHP+VAT LNN A
Sbjct: 66 RGGVFWMRVGRHAKNSLLSLLQGLAREMSAAPTDTPHGVPHVLESLEQVKQHLATVASAGTSPRLVVLDDVWEREVVDALLSLGLKVLVTTRDRSVVGVSGGLLELGDMTEEEALELLLKTSRTVGQPGHEVRTQMTKVVVLCGHLPLVLAIAGSMSVVKGKGLTAVAWEELIKEFENVAKKMRVR---------GEQSSSIKV--VLGTSFDALAARKQEESLKMTVLAAGALAPIEMLRNLWEIEDAEGTREEAEGLVSKCLLQAVGGSGYRVHDLVLEFVKTSIRAEEEMVEKATALQAQYLGRVDVLKSY-GDPEHGAGNQGLFFLDALWRSVEKLSGDPELEVASYRASLGELESCEATEDVASSYRWVGFLFNIQGKFTEAEPLYGRSQAIQEKVLGPEHPDVATSLNNRA 470
BLAST of mRNA_P-littoralis_Contig1194.15.11 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI) HSP 1 Score: 309 bits (792), Expect = 3.200e-83 Identity = 197/420 (46.90%), Postives = 253/420 (60.24%), Query Frame = 1
Query: 1 RQGIFWVRVGRGGKDQLQALFAGLAREVSVAPR-----VPHQFNSVDEVIQHLTQVA-VDTLPRLVVLDDVWEREVVDALQPTGLQLLVTTRRSSVVAVEGGRTVVGNMENGEARELLKSKSGAVALP----ETEANKVVEDCGWHALTLAIAGSLRCVTVSPNSAPAWRKL--HLEIARQKRTSLGPEMDADIGDDLTKLSLFSVLDLSLVSMGRDEKHLLLSLVVLARGVSAPAPMLANLWG-KDNRGARKEADFLVDNSLLQEVGGS-FRMHDLLLDFIRTKCHGEDALIESAVGRQAQYLGTLAVLRGYFG--NGEVGGGLYSLIRLWRSLFELSSNEQLEVDAYNSSLGDLGEAESTDA-ASMFFAVGRLFELQGKYEEAEPLYKRSLAIDEKFYGPEHPEVATDLNNWAGLLKK 1209
R GIFWVRVGRG K L AL GLA +V AP VPH + +++V QHL VA T PRLVVLDDVWEREVVDA P G ++L+TTR SVV + GR +G+M EA ELL+ SG V P T+ KVV CG L LAIAGS+ V +A AW +L LE +K + G + S+ VL+ S S+ ++ L + VLA G AP ML NLW +D G R +A+ LV LL VGG +R+HDL+L+F +T E+ ++ A QAQYLG L VL GY +G G GL+ L LWRS+ +LS + +LEV +Y++SLG+L E+T A A +++VG LF +QGKY EAEPLY+RSLAI EK GPEHP+VAT L+N A LL++
Sbjct: 325 RGGIFWVRVGRGAKSSLLALLQGLAWDVGAAPTDAPHGVPHVLDRLEQVQQHLAAVASTGTSPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGLPAGRLELGDMTEEEALELLRKTSGTVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSS----------SMKVVLETSFDSLAVRKQEEFLKMAVLAAGALAPIEMLRNLWEVEDAEGTRDDAEGLVSKCLLHAVGGGGYRVHDLVLEFAKTSIRAEEETVKKATALQAQYLGRLDVLEGYGDPEHGAGGQGLFFLDALWRSVEKLSGDPELEVASYHNSLGELESCEATKAVARSYWSVGFLFNIQGKYAEAEPLYERSLAIQEKVLGPEHPDVATSLDNRASLLER 734
BLAST of mRNA_P-littoralis_Contig1194.15.11 vs. uniprot
Match: D7G720_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G720_ECTSI) HSP 1 Score: 291 bits (745), Expect = 8.480e-77 Identity = 192/414 (46.38%), Postives = 244/414 (58.94%), Query Frame = 1
Query: 1 RQGIFWVRVGRGGKDQLQALFAGLAREVSVAPR-----VPHQFNSVDEVIQHLTQV-AVDTLPRLVVLDDVWEREVVDALQPTGLQLLVTTRRSSVVAVEGGRTVVGNMENGEARELLKSKSGAVALP----ETEANKVVEDCGWHALTLAIAGSLRCVTVSPNSAPAWRKL--HLEIARQKRTSLGPEMDADIGDDLTKLSLFSVLDLSLVSMGRDEKHLLLSLVVLARGVSAPAPMLANLWG-KDNRGARKEADFLVDNSLLQEVGGS-FRMHDLLLDFIRTKCHGEDALIESAVGRQAQYLGTLAVLRGYFGNGEVGGG---LYSLIRLWRSLFELSSNEQLEVDAYNSSLGDLGEAESTDA-ASMFFAVGRLFELQGKYEEAEPLYKRSLAIDEKFYGPEHPEVATDLNN 1188
R GIFWVRVGRG K L AL GLAR+V AP VP +S+++V QHL V + T RLVVLDDVWEREVVDA P G ++L+TTR SVV V GR +G++ EA ELL+ SGAV P T+ KVV CG L LAIAGS+ V +A AW +L LE +K + G + S+ VL+ S S+ ++ L + VLA G AP ML NLW +D G R +A+ LV LL VGG +R+HDL+L+F +T E+ ++ A QAQYLG L VL Y G+ E G G L+ L LWRS+ +LS + LEV +Y +SL +L E+T+A A+ + +VG LF +Q KY EAEPLY+RS AI EK GPEHP VAT LNN
Sbjct: 308 RGGIFWVRVGRGAKSSLLALLQGLARDVGAAPTDAPCGVPRVLDSLEQVRQHLAAVTSTGTSQRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRLELGDVTEEEALELLRKTSGAVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSS----------SMKVVLETSFDSLAVRKQEEFLKMAVLAAGALAPIEMLRNLWEIEDAEGTRDDAEGLVSKCLLHAVGGGGYRVHDLVLEFAKTSIRAEEETVKKATALQAQYLGRLDVLESY-GDPEHGTGDQGLFFLDALWRSVEKLSGDPGLEVASYRASLEELESCEATEAVATSYGSVGFLFNIQSKYAEAEPLYERSRAIQEKVLGPEHPHVATSLNN 710
BLAST of mRNA_P-littoralis_Contig1194.15.11 vs. uniprot
Match: D7FUD7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD7_ECTSI) HSP 1 Score: 288 bits (737), Expect = 5.830e-76 Identity = 190/416 (45.67%), Postives = 244/416 (58.65%), Query Frame = 1
Query: 1 RQGIFWVRVGRGGKDQLQALFAGLAREVSVAPR-----VPHQFNSVDEVIQHLTQVA-VDTLPRLVVLDDVWEREVVDALQPTGLQLLVTTRRSSVVAVEGGRTVVGNMENGEARELLKSKSGAVALPET---EANKVVEDCGWHALTLAIAGSLRCVTVSPNSAPAWRKL--HLEIARQKRTSLGPEMDADIGDDLTKLSLFSVLDLSLVSMGRDEKHLLLSLVVLARGVSAPAPMLANLWG-KDNRGARKEADFLVDNSLLQEVGGS-FRMHDLLLDFIRTKCHGEDALIESAVGRQAQYLGTLAVLRGYFGNGEVGGG---LYSLIRLWRSLFELSSNEQLEVDAYNSSLGDLGEAESTDAASM-FFAVGRLFELQGKYEEAEPLYKRSLAIDEKFYGPEHPEVATDLNNWAG 1197
R GI WVRVGRG K+ L L GLAREV AP VPH +S+++V QHL VA PRLVVLDDVWEREVVDA P G +LL+TTR S+V GR +G+M EA ELL+ SG V + + KVV CG L LAIAGS+ V +A AW +L E +K + G + S+ VL+ + S+ ++ L + VLA G AP ML+NLW +D G EA+ LV LL VGG +RMHDL+LDF +T E+ ++ A QAQYLG L V+ Y G+ E G G ++ L LWRS+ +LS + QLEV +Y +SLG L E+T+AA+ +F+VG LF +QGKY++AE LYKRSLA EK G EHP+VA LN+ AG
Sbjct: 110 RGGISWVRVGRGAKNSLLPLLQGLAREVGAAPTDAPHGVPHALDSLEQVQQHLAAVASTRNSPRLVVLDDVWEREVVDAFVPLGFKLLLTTRDRSIVCDPAGRLELGDMTEEEALELLRKTSGTVDPGDDVRMKMTKVVALCGHLPLVLAIAGSMSAVKGKGLTAVAWEELAKEFENVAKKMRARGQQSS----------SIKVVLETTFDSLATRKQKEFLMMAVLAAGALAPIEMLSNLWEIEDAEGTHAEAEGLVSKYLLHAVGGGGYRMHDLVLDFAKTSIRAEEETVKRATALQAQYLGRLDVVESY-GDPEHGAGDQGIFFLDALWRSVEKLSGDPQLEVASYRASLGALEWGEATEAAARSYFSVGFLFNVQGKYDDAESLYKRSLATQEKVLGQEHPDVAQSLNDLAG 514
BLAST of mRNA_P-littoralis_Contig1194.15.11 vs. uniprot
Match: D8LGG5_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGG5_ECTSI) HSP 1 Score: 280 bits (717), Expect = 3.900e-73 Identity = 187/420 (44.52%), Postives = 243/420 (57.86%), Query Frame = 1
Query: 1 RQGIFWVRVGRGGKDQLQALFAGLAREVSVAPR-----VPHQFNSVDEVIQHLTQVAVDT--LPRLVVLDDVWEREVVDALQPTGLQLLVTTRRSSVVAVEGGRTVVGNMENGEARELLKSKSGAVALP----ETEANKVVEDCGWHALTLAIAGSLRCVTVSPNSAPAWRKL--HLEIARQKRTSLGPEMDADIGDDLTKLSLFSVLDLSLVSMGRDEKHLLLSLVVLARGVSAPAPMLANLWG-KDNRGARKEADFLVDNSLLQEVG-GSFRMHDLLLDFIRTKCHGEDALIESAVGRQAQYLGTLAVLRGYFG--NGEVGGGLYSLIRLWRSLFELSSNEQLEVDAYNSSLGDLGEAEST-DAASMFFAVGRLFELQGKYEEAEPLYKRSLAIDEKFYGPEHPEVATDLNNWAGLLK 1206
R GI WVRVGRG K+ L L GLARE+ VAP VP +S+++V QHL V T PRLVVLDDVWEREVVDAL P G ++L+TTR SVV V R +G+M EA ELL+ SG V P + KVV CG L LAIAGS+ V +A AW +L E +K + G + A + VL+ S S+ ++ L + VLA G AP ML NLW +D G R EA+ LV+ LL VG G +R+HD++L+F +T ++ +E A QAQ+LG L VL+ Y +G GL+ L LWRS+ +LS + +LEV Y +SL +L ++T D AS + AVG LF+ Q KY EAEPL++R+ A+ EK GPEHP VA LNN A LL+
Sbjct: 282 RGGISWVRVGRGAKNSLLPLLQGLAREMGVAPTDAPHAVPQVLDSLEQVQQHLAAVVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDWSVVVVPARRLDLGDMTEEEALELLRKTSGTVGQPGDYVRMKMTKVVALCGHLPLVLAIAGSMSAVKGKGLTAVAWEELAKSFENVAKKMRARGQQSSA----------IKVVLETSFDSLAVQKQEEFLRMSVLAAGALAPIEMLRNLWEIEDAEGTRDEAEGLVNKCLLHAVGDGGYRVHDMVLEFAKTSIRADEETVEKATALQAQFLGRLDVLKSYRDPEHGAGDRGLFFLDSLWRSVEKLSGDPELEVTTYRASLRELESCKATEDMASSYSAVGFLFDAQRKYIEAEPLHERAQAMQEKVLGPEHPGVAQSLNNRADLLR 691
BLAST of mRNA_P-littoralis_Contig1194.15.11 vs. uniprot
Match: A0A6H5KXS7_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE) HSP 1 Score: 268 bits (684), Expect = 1.110e-72 Identity = 190/450 (42.22%), Postives = 244/450 (54.22%), Query Frame = 1
Query: 1 RQGIFWVRVGRGGKDQLQALFAGLAREVSVAPR-----VPHQFNSVDEVIQHLTQVA-VDTLPRLVVLDDVWEREVVDALQPTGLQLLVTTRRSSVVAVEGGRTVVGNMENGEARELLKSKSGAVALP----ETEANKVVEDCGWHALTLAIAGSLRCVTVSPNSAPAWRKL--HLEIARQKRTSLGPEMDADIGDDLTKLSLFSVLDLSLVSMGRDEKHLLLSLVVLARGVS-----------------------------APAPMLANLWG-KDNRGARKEADFLVDNSLLQEVGGS-FRMHDLLLDFIRTKCHGEDALIESAVGRQAQYLGTLAVLRGYFGNGEVGGG---LYSLIRLWRSLFELSSNEQLEVDAYNSSLGDLGEAESTDA-ASMFFAVGRLFELQGKYEEAEPLYKRSLAIDEKFYGPEHPEVATDLNNWAGLLKK 1209
R GIFWVRVGRG K L AL GLARE+ A VPH + +++V QHL VA T PRLVVLDDVWEREVVDA P G ++L+TTR SVV V GR VG+M EA ELL+ SGAV P T+ KVV CG L LAIAGS+ V +A AW++L +LE +K + G + S+ +VL+ S S+ ++ L L VLA AP ML NLW +D G R EA+ LV LL VGG +R+HDL+L++ +T+ + ++ QA +LG L VL+ Y + E G G L+ L LWRS+ +LS + +LEV L E+T+A A +++VG LF +QGKY EAEPLY+RS AI E GPEHP+V T LNN A LL+K
Sbjct: 271 RGGIFWVRVGRGAKSSLLALLQGLAREMGAARTDAPHTVPHVLDGLEQVKQHLAAVASTGTFPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVVVPAGRLEVGDMTEEEALELLRKSSGAVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVKGKGLTAVAWKELAENLENVAKKMRARGEQSS----------SINAVLETSFDSLAVRKQEEFLKLAVLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAPIEMLRNLWEIEDAEGTRDEAEGLVSKCLLHAVGGGGYRVHDLVLEYAKTRIRADAEMVRKVTALQAHFLGRLDVLKSYR-DPEHGAGNQSLFFLDALWRSVEKLSGDPELEVA--------LESCEATEAVARSYWSVGFLFNIQGKYAEAEPLYERSQAIQENVLGPEHPDVGTSLNNRALLLEK 701 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1194.15.11 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1194.15.11 >prot_P-littoralis_Contig1194.15.11 ID=prot_P-littoralis_Contig1194.15.11|Name=mRNA_P-littoralis_Contig1194.15.11|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1012bp MENGEARELLKSKSGAVALPETEANKVVEDCGWHALTLAIAGSLRCVTVSback to top mRNA from alignment at P-littoralis_Contig1194:35084..48982+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1194.15.11 ID=mRNA_P-littoralis_Contig1194.15.11|Name=mRNA_P-littoralis_Contig1194.15.11|organism=Pylaiella littoralis U1_48|type=mRNA|length=13899bp|location=Sequence derived from alignment at P-littoralis_Contig1194:35084..48982+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1194:35084..48982+ >mRNA_P-littoralis_Contig1194.15.11 ID=mRNA_P-littoralis_Contig1194.15.11|Name=mRNA_P-littoralis_Contig1194.15.11|organism=Pylaiella littoralis U1_48|type=CDS|length=3036bp|location=Sequence derived from alignment at P-littoralis_Contig1194:35084..48982+ (Pylaiella littoralis U1_48)back to top |