mRNA_P-littoralis_Contig77.14.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig77.14.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE) HSP 1 Score: 385 bits (988), Expect = 1.260e-121 Identity = 227/435 (52.18%), Postives = 284/435 (65.29%), Query Frame = 2
Query: 179 ILDEAEECGGRSTELEAARGVRRTTAAAPATPTTCPSTVIAPALLTSPAAESDEASFNLADLRVALEEAVDSGHVEESAVRRILLQVATHSS-TEGNGGGSPLHVAAALGQERIVMVLLLKGANPDALDSKGRTPLHLAVEYDHLSAVKVILAANPDMSIRYKVASRGYSVLDLAAREGNVDVLRALLQHGVDVNRRTDGXXXXXXXXXXXXXXXXXXXXXXXADMEVDDDYECTPFLDACSNHCHEAALTLFKYGAKVEARDIRGETPLQTAARQAGREGVPAIVNLLLRCGGDETAVNPEGRTASEIVGHHMEYAACPLEKAGVDRVRKLLANAPADRAWRRRGFLVLCRAFRTKGRFLTTTTTRNESQNRKVLH-----DINVSGGNSYAWTGEKERRQQQRGVIGSGMGSALENVPNKQVEKAVSADSLRS 1465
+L EA E GGRST A G + +A S IA L SPAA S E SF+LA +RVAL+EAVDSGHV+ESAV+ IL+ S +E LHV+A+ GQE V LL +GA + LD++GRTPLHLAVE HLS VK +LAA+PD S+ Y++ +R YSVLD AA++G+ VLRA+LQHGVDVNRRTDG A +EV+DD +CTPFLDACSNHCHEAAL LFK+GA +EARD+RGETPL AARQAGR+GV AIV++LLRCG DETA+NP+GRTA+E+VGHH+EYAACPL K ++RVR LL NAPADRAWRRRG LVLCRAF K R L ++ + + ++V+GG +K RR+Q ++G G+G E+ V AD+ R+
Sbjct: 1 MLLEAGEDGGRSTTQVA--GGQSLSA----------SCGIADLLFASPAALSSETSFDLASMRVALKEAVDSGHVDESAVKPILVMAKVASLLSESVDSSDQLHVSASQGQEVRVATLLAEGAKKNGLDAQGRTPLHLAVENGHLSTVKALLAADPDTSVHYRIWNRSYSVLDFAAQKGDACVLRAILQHGVDVNRRTDGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACSNHCHEAALALFKHGANIEARDMRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRAFWIKSRRLRAASSSARGIGPRAMSVSIGVRVSVAGG-ELREDDDKGRRKQGCDLVGGGVG-----------ERNVQADTNRT 411
BLAST of mRNA_P-littoralis_Contig77.14.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI) HSP 1 Score: 372 bits (956), Expect = 2.570e-117 Identity = 202/351 (57.55%), Postives = 245/351 (69.80%), Query Frame = 2
Query: 362 LRVALEEAVDSGHVEESAVRRILLQVATHSSTEGNGGGSP-LHVAAALGQERIVMVLLLKGANPDALDSKGRTPLHLAVEYDHLSAVKVILAANPDMSIRYKVASRGYSVLDLAAREGNVDVLRALLQHGVDVNRRTDGXXXXXXXXXXXXXXXXXXXXXXXADMEVDDDYECTPFLDACSNHCHEAALTLFKYGAKVEARDIRGETPLQTAARQAGREGVPAIVNLLLRCGGDETAVNPEGRTASEIVGHHMEYAACPLEKAGVDRVRKLLANAPADRAWRRRGFLVLCRAFRTKGRFLTTTTTRNESQN---RKVLHDINVSG-GNSYAWTGEKERRQQQRGVIGSGMG 1399
+RVALEEAVDSGHV+ESAV IL+ S + S LHVAA+ GQE V LL GA + LD++GRTPLHLAVE HLS VK +LAA+PD S+RY++ +R YSVLDLAA++G+ VLRA+LQHGVDVNRRTDG A +EV+DD +CTPFLDAC NHCHEAAL L+K+G+ +EARDIRGETPL AARQAGR+GV AIV++LLRCG DETA+NP+GRTA+E+VGHH+EYAACPL K V+RVR LL NAP DRAWRRRGFLVLCRAF K R L ++ S R + +SG G +K RR+Q G++G G+G
Sbjct: 1 MRVALEEAVDSGHVDESAVEPILVVAKVASLQYASVDSSDQLHVAASQGQEGRVATLLAGGAKKNGLDAQGRTPLHLAVENGHLSTVKALLAADPDTSVRYRIWNRSYSVLDLAAQKGDACVLRAILQHGVDVNRRTDGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACINHCHEAALALYKHGSNIEARDIRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRAFWIKARRLRAASSNASSNGPRVRSLSTGARISGAGGELREDDDKGRRKQGCGLVGGGVG 351
BLAST of mRNA_P-littoralis_Contig77.14.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE) HSP 1 Score: 114 bits (284), Expect = 1.220e-22 Identity = 116/388 (29.90%), Postives = 172/388 (44.33%), Query Frame = 2
Query: 470 GGSPLHVAAALGQERIVMVLLLKG-ANPDALDSKGRTPLHLAVEYDHLSAVKVILAANPDMSIRYKVASR-GYSVLDLAAREGNVDVLRALLQHGVDVNRRTDGXXXXXXXXXXXXXXXXXXXXXXXADMEVDDDYECTPFLDACS--------NHCHEAALTLFKYGAKVEARDIRGETPLQTAARQAGREGVPAIVNLLLRCGGDETAVNPEGRTASEIVG-HHMEYAACPLEKAG-------------------VDRVRKLLANAPADRAWRRRGFLVLCRAFRTKGRFLTTTTTRNE----SQNRKVLHDINVSGGNSYAWTGEKERRQQQRGVIGSGMGSAL-ENVPNKQVEKAVSADSLRSVVVRVLELVEEGLFRNIVGFL 1528
G +PLH+AAA G R+V LL + DALDS+G +PL +A E H S V+ +L A DM++R+ + G + +D+A +G+V V+ A++++G +V R TD D D + + P L + N C EA + L K G V + G + L R G+ +V+LLLR G ETAVN G T S+I+ EY A G + R R LLA APADR WRRR +LV+ RA +GR ++ + ++ + R + G NS + G +G G G E + + + +A +V ++ L E +FR IV FL
Sbjct: 172 GRTPLHLAAASGNNRVVSTLLGNAMTDVDALDSRGVSPLMVASEGGHCSTVEALLRAGADMNLRHAGGAHLGMTAMDVAVSKGHVGVIEAIVENGGNV-RATD-----TYGLTALHHARGAQAVDVLLDAGADVNAKACPALHGFTPLSVCVMDNSC-EAVVALLKRGGNVNDTNCGGLSALHLTCGSLSR-GMDRMVDLLLRWGASETAVNKNGLTPSDILKVTTAEYHARDAGGDGSATRCVGGSATRHDSLTKEIQRARVLLARAPADRTWRRRCWLVMLRARAERGRGAPSSGSGSDRTEAATGRNLPRHEEADGDNSKVG-------KTDAGAVGEGSGPTDGERGRDGRATRGAAAGE-GGLVPALVGLESEEVFRTIVCFL 543
BLAST of mRNA_P-littoralis_Contig77.14.1 vs. uniprot
Match: A0A6H5KFY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFY7_9PHAE) HSP 1 Score: 110 bits (275), Expect = 1.350e-22 Identity = 103/379 (27.18%), Postives = 164/379 (43.27%), Query Frame = 2
Query: 416 VRRILLQVATHSSTEGNGGGSPLHVAAALGQERIVMVLLLKGANPDALDSKGRTPLHLAVEYDHLSAVKVILAANPDMSIRYKVASRGYSVLDLAAREGNVDVLRALLQHGVDVNRRTDGXXXXXXXXXXXXXXXXXXXXXXXADMEVDDDYECTPFLDACSNHCHEAALTLFKYGAKVEARD-IRGETPLQTAARQAGREGVPAIVNLLLRCGGDETAVNPEGRTASEIVGHHMEYAACPLEKAGVDRVRKLLANAPADRAWRRRGFLVLCRAFRTKGRFLT-----TTTTRNESQNRKVLHDINVSGGNSYAWTGEKERRQQQRGVIGSGMGSALENVPNKQVE--KAVSADSLRSVVVRVLELVEEGLFRNIVGFL 1528
+ + LL + S G G P+H AA G + +V+ L KG +P + ++ T L LAV+ +H++ + +LA D + + R + +AA N + AL + GV + R+ TP +A EA L L + GA V +++ I G +PL +A R EG +LLLR G DETAV+ + +T ++ H + + A + ++RV +LLA AP DRAWRRRGFLV C + + + T ++Q R H A TG+ E + + G ++ + E + + + ++ L EE LFR I+GFL
Sbjct: 7 IAKDLLLSGANPSKAGFEGWFPIHFAAHHGLDEVVVSLFHKGIDPTCVTTREETHLLLAVKRNHVAIINALLAEGAD--VNFLTTRRPVPLAHIAALHNNAAAMPALFKAGVYIEGRSPKGR--------------------------------TPLQNAAFCGSCEAMLALLQLGANVNSKNTINGLSPLCSACR----EGHHDAADLLLRWGADETAVDSDEKTIVSMMTHRI-FRAAVASRQRLERVSELLARAPQDRAWRRRGFLVPCLSHPDRVQLAVEIPEAATEAIEQTQERPRRH----------ARTGQVEVKVEMDGTNXXXXXXXXKSGAREGTESMREGTDGGFNGLSAWMIALTEEHLFRKIMGFL 336
BLAST of mRNA_P-littoralis_Contig77.14.1 vs. uniprot
Match: D7FXA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA8_ECTSI) HSP 1 Score: 106 bits (264), Expect = 2.630e-20 Identity = 122/421 (28.98%), Postives = 181/421 (42.99%), Query Frame = 2
Query: 365 RVALEEAVDSGHVEESAVRRILLQVATHSSTEGNGGGSPLHVAAALGQERIVMVLLLKGANPDAL--DSKGR-TPLHLAVEYD------------------HLSAVKVILAANPDMSIRYKVASRGYSVLDLAAREGNVDVLRALLQHGVDVNRRTDGXXXXXXXXXXXXXXXXXXXXXXXADMEVDDDYECTPFLD-------ACSNHCHEAALTLFKYGAKVEARDIRGETPLQTAARQAGREGVPAIVNLLLRCGGDETAVNPEGRTASEIVGHHME--YAACPL---EKAGVDRVRKLLANAPADRAWRRRGFLVLCRAFRTKGRFLTTTTTRNESQNRKVLHDINVSGGNSYAWTGEKERRQQQRGVIGSGMGSALENVPNKQVEKAVSADSLRSVVVRVLELVEEGLFRNIVGFL 1528
R AL ++V H E+A R+++L A + + PL A G + +V LL+ GANP+ + S G TPLH A + H++ VKV+LAA D IR +S L AA+ +DV++ALL+HGVDVN D AD++V +C+ FLD A +EA L L + GA V G T L + G V++LLR G E AV+ G+ ++ +A P+ E ++R +LLA APADR WRRR +L++ R K R + R + +KV + + G+ RR + G G AV D LR +V ++ L +G+FR I+G++
Sbjct: 104 RSALYQSVLGKH--EAAARKLILAGADVNFVDRADKAGPLFAAVKAGCDDLVGNLLMAGANPNVIVRHSFGHGTPLHAAAKQGLANTASVLLSSPSTDKNGHVATVKVLLAAGADTDIR---DLDSHSALVFAAQYERIDVMKALLEHGVDVNVGEDHWNPLHWAAQFNSTGCITVLLDAGADIDV----KCS-FLDGRTSLHFAAETGNNEALLALLRRGANVHQTTDDGSTALHLVSEMEGH-APDDTVDILLRRGASEQAVDRNGKAPVDLFKRVQRRFQSARPMGDSEWPELERAIELLARAPADRTWRRRCWLIMLRERTNKERTIHGGRRR---KGKKVGNGEGLLLGDGKRGGSNNVRRSGRSRGRGGG-------------RAAVEVD-LRGLVSVLVCLESDGVFRTILGYI 496
BLAST of mRNA_P-littoralis_Contig77.14.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE) HSP 1 Score: 104 bits (259), Expect = 4.200e-20 Identity = 73/186 (39.25%), Postives = 99/186 (53.23%), Query Frame = 2
Query: 977 TPLQTAARQAGREGVPAIVNLLLRCGGDETAVNPEGRTASEIVGHHMEYAACPLEKAGVDRVRKLLANAPADRAWRRRGFLVLCRAF--RTKGRFLTTTTTRNESQNRKVLHDINVSGGNSYAWTGEKERRQQQRGVIGSGMGSALENVPNKQVEKAVSADSLRSVVVRVLELVEEGLFRNIVGFL 1528
TPL A RQAGR+G +VN LLR G DET N +G A +++G +E E V+RVR+LLANAPADRAWRRRG+L++CRA R R +T+ T H NV+ RR + R + G A E+ ++ + + VV +V+ L EEG+FR IV +L
Sbjct: 245 TPLMKAGRQAGRQGAAEVVNSLLRAGADETIANVQGNKAVDMIGEDVEEEDRLTED--VERVRELLANAPADRAWRRRGYLIMCRAQPDRVPERRMTSGT-----------HYTNVA------------RRTRSRAKMARARGIAGESTVDES-----TGGNWAVVVSKVISLQEEGIFRTIVEYL 400
BLAST of mRNA_P-littoralis_Contig77.14.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI) HSP 1 Score: 103 bits (257), Expect = 5.980e-20 Identity = 76/209 (36.36%), Postives = 104/209 (49.76%), Query Frame = 2
Query: 644 DMSIRYKVASRGYSVLDLAAREGNVDVLRALLQHGVDVNRRTDGXXXXXXXXXXXXXXXXXXXXXXXADMEVDDDYECTPFLDACSNHCHEAALT-----------LFKYGAKVEARDIRGETPLQTAARQAGREGVPAIVNLLLRCGGDETAVNPEGRTASEIVGHHM-EYAACPLEKAGVDRVRKLLANAPADRAWRRRGFLVLCRA 1234
D++ RY R S LD+ A EG+VD +R L++HG DV+ G D+ + ++ H AA+T L K+GA V A+ + G + L+ A +AG++G+ +V+LLLR G DET V G A++ +G + E P E GV RKLLANAPADRAWRRR LVLCRA
Sbjct: 151 DINRRY--GDREISALDIGAGEGHVDFIRTLIEHGADVDATNYGGVAALHHATANNKVEAM-------DVLLRAGANARSMSESGHTVLHMAAITRTRTEAATLAVLLKHGADVNAQTVGGTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPEEDRIPEEFEGV---RKLLANAPADRAWRRRCSLVLCRA 347
BLAST of mRNA_P-littoralis_Contig77.14.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE) HSP 1 Score: 106 bits (265), Expect = 6.150e-20 Identity = 96/311 (30.87%), Postives = 133/311 (42.77%), Query Frame = 2
Query: 374 LEEAVDSGHVEESAVRRILLQVATHSSTEGNG-GGSPLHVAAALGQERIVMVLLLKGANPDALDSKGRT----------------PLHLAVEYDHLSAVKVILAANPDMSIRYKVASRGYSVLDLAAREGNVDVLRALLQHGVDVNRRTD-GXXXXXXXXXXXXXXXXXXXXXXXADMEVDDDYECTPFLDACSNHCHEAALTLFKYGAKVEARDIRGETPLQTAARQAGREGVPAIVNLLLRCGGDETAVNPEGRTASEIVGHHMEYAACPLEKAGVDRVRKLLANAPADRAWRRRGFLVLCRAFRTKGR 1252
L+ A G+V A + LL +S++ G S L A G +V V + + + D G+T PLHL +A + +L A D+++R G S HG DVN + + G A++E + TP A A + L ++GA V ++ +TPL A +AG G +V+LLLR G DETAV+ G TA+++V E + E VDRVRKLLA APADRAWRRRGFL+L RA GR
Sbjct: 411 LQMAAGEGNV---AATQALLDAGADASSQSEGEASSALDCAVCQGYTDVVRVKIEHEIDVNISDVDGKTALHHAVAAGKVEMGCTPLHLVAMAGRAAAAQALLDAGADVALRQNGV--GLSSXXXXXXXXXXXXXXXXXXHGGDVNAKVNNGITALRVASAFDKAPAIDVLTEAGANIEAQANGS-TPLHVASQEGRLAAGIALLRHGASVGKKNAAAQTPLHLVAAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDSLAED--VDRVRKLLARAPADRAWRRRGFLILSRAHYPGGR 713
BLAST of mRNA_P-littoralis_Contig77.14.1 vs. uniprot
Match: A0A6H5JFR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFR1_9PHAE) HSP 1 Score: 99.0 bits (245), Expect = 3.160e-19 Identity = 96/265 (36.23%), Postives = 134/265 (50.57%), Query Frame = 2
Query: 473 GSPLHVAAALGQERIVMVLLLKGANPDALDSKGRTPLHLAVE---------YDHLSAVKVILAANPDMSIRYKVASRGYSVLDLAAREGNVDVLRALLQHGVDVNR-RTDGXXXXXXXXXXXXXXXXXXXXXXXADMEVDDDYECTPFLDACSNHCHEAALTLFKYGAKVEARDIRGETPLQTAARQAGREGVPAIVNLLLRCGGDETAVNPEGRTASEIVGHHMEYAACPLEKAGVDRVRKLLANAPADRAWRRRGFLVLCRAF 1237
GS LH A G +V LL GA D++G TPL +A E + HL++ + ++AA ++++R ++ R +VL LAA +G+VD+LRAL+++G DV D XXXXXXXXXXXXXXXXX +A + L K + A +V+LLLR G ET V+ + A+ ++ + +C L +RV KLL NAPADRAWRRRGFL+LCRA+
Sbjct: 2 GSALHAAVRYGYAEVVTNLLEHGACVSIKDARGSTPLQVAAECTPLFGALLFGHLTSARALMAAGAEINVRCGLSKR--TVLSLAAEKGDVDILRALVKNGADVTAVDNDRDMALHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQAVVALSKRARRTSA-----------------------VVDLLLRLGAHETIVDKRKKNAAGLL--KKSWWSC-LYPGDAERVYKLLRNAPADRAWRRRGFLLLCRAY 238
BLAST of mRNA_P-littoralis_Contig77.14.1 vs. uniprot
Match: A0A6H5JT17_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT17_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 6.920e-18 Identity = 75/247 (30.36%), Postives = 106/247 (42.91%), Query Frame = 2
Query: 494 AALGQERIVMVLLLKGANPDALDSKGRTPLHLAVEYDHLSAVKVILAANPDMSIRYKVASRGYSVLDLAAREGNVDVLRALLQHGVDVNRRTDGXXXXXXXXXXXXXXXXXXXXXXXADMEVDDDYECTPFLDACSNHCHEAALTLFKYGAKVEARDIRGETPLQTAARQAGREGVPAIVNLLLRCGGDETAVNPEGRTASEIVGHHMEYAACPLEKAGVDRVRKLLANAPADRAWRRRGFLVLCRA 1234
AA ++ V +L +GA D + +G+ PLH+ VEY+ L+ + +L ++++R+ ++ R YS L A R + RALLQHG G TP A H + L + GA V+A G TPL + + G +LLL DET + +GRT +V RVR+ LANAPADR WR RG LV+CRA
Sbjct: 138 AAAHDDKFVSTILRRGARVDRPNREGKYPLHVEVEYNRLTVAEALLTVGANLNVRFGISKR-YSPLYFALRRSPA-MTRALLQHGAASFEPYHGVCGKHSSVGL------------------------TPLHVAAYYHRSLSMAALLRSGANVDAEADNGLTPLHMVCKTSLAPGSVKANDLLLSWDADETTTDHDGRTPKALVSGRSSLRW---------RVRQKLANAPADRLWRSRGMLVMCRA 349 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig77.14.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig77.14.1 >prot_P-littoralis_Contig77.14.1 ID=prot_P-littoralis_Contig77.14.1|Name=mRNA_P-littoralis_Contig77.14.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=499bp MFDLVSDVVLRYEAPSTCCANAAAAAAAVATAGAAATVVPFWQQGGDHILback to top mRNA from alignment at P-littoralis_Contig77:52415..56789+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig77.14.1 ID=mRNA_P-littoralis_Contig77.14.1|Name=mRNA_P-littoralis_Contig77.14.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4375bp|location=Sequence derived from alignment at P-littoralis_Contig77:52415..56789+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig77:52415..56789+ >mRNA_P-littoralis_Contig77.14.1 ID=mRNA_P-littoralis_Contig77.14.1|Name=mRNA_P-littoralis_Contig77.14.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1497bp|location=Sequence derived from alignment at P-littoralis_Contig77:52415..56789+ (Pylaiella littoralis U1_48)back to top |